Microbial and Geochemical Dynamics of an Aquifer Stimulated for Microbial Induced Calcite Precipitation (MICP)

Tracking microbial movement in saturated media with spectral induced polarization

Pathogenic microorganisms in the subsurface can contaminate soil and water supplies, potentially posing great danger to human health. Early contamination detection routines rely on sparse direct sampling which is spatiotemporally limited. Thus, the path of microorganisms in the subsurface remains ambiguous and this can cause delays in detection of biohazardous threats. The geophysical spectral induced polarization (SIP) technique, sensitive to microbes' presence and activity in porous media, is a promising method to monitor microbial transport pathways. Here we evaluated the efficiency of SIP in monitoring the chemotactic movement of Sporosarcina pasteurii in saturated porous media. A cylindrical sample holder was packed with Ottawa sand and saturated with sterile KCl solution. The sample holder was oriented vertically and S. pasteurii was introduced at the bottom, forcing the movement of the microbes against gravity, towards a carbon source available at the top of the column. Temporal SIP measurements were collected at 3 regions of the sample holder: bottom (microbial injection point), middle and top (carbon source). Both the real (σ') and imaginary (σ″) conductivity parts of the SIP signal increased over time with the σ″ showing a peak signal magnitude following the upward movement of the microbes. We repeated the experiment excluding the carbon source in experiment 2 and omitting microbial injection in experiment 3. However, we did not observe any significant SIP signal changes in these two experiments. This is the first study to indicate the strong SIP signal correlation with microbial chemotaxis.

Green and effective remediation of heavy metals contaminated water using CaCO3 vaterite synthesized through biomineralization

Heavy metal pollution has attracted significant attention due to its persistent presence in aquatic environments. A novel vaterite-based calcium carbonate adsorbent, named biogenic CaCO3, was synthesized utilizing a microbially induced carbonate precipitation (MICP) method to remediate heavy metal-contaminated water. The maximum Cd2+ removal capacity of biogenic CaCO3 was 1074.04 mg Cd2+/g CaCO3 with a high Cd2+ removal efficiency greater than 90% (initial Cd2+ concentration 400 mg/L). Furthermore, the biogenic CaCO₃ vaterite, induced by microbial-induced calcium carbonate precipitation (MICP) process, demonstrated a prolonged phase transformation to calcite and enhanced stability. This resulted in a sustained high effectiveness (greater than 96%) following six consecutive recycling tests. Additionally, X-ray diffraction (XRD) and scanning electron microscopy (SEM) analyses revealed that the semi-stable vaterite type of biogenic CaCO3 spontaneously underwent dissolution and recrystallization to form thermodynamic stable calcite in aquatic environments. However, the presence of Cd2+ leads to the transformation of vaterite into CdCO3 rather than undergoing direct converting to calcite. This transformation is attributed to the relatively low solubility of CdCO3 compared to calcite. Meanwhile, the biogenic CaCO3 proved to be an efficient and viable method for the removal of Pb2+, Cu2+, Zn2+, Co2+, Ni2+ and Mn2+ from water samples, surpassing the performance of previously reported adsorbents. Overall, the efficient and promising adsorbent demonstrates potential for practical in situ remediation of heavy metals-contaminated water.

Microbial functionalities and immobilization of environmental lead: Biogeochemical and molecular mechanisms and implications for bioremediation

The increasing environmental and human health concerns about lead in the environment have stimulated scientists to search for microbial processes as innovative bioremediation strategies for a suite of different contaminated media. In this paper, we provide a compressive synthesis of existing research on microbial mediated biogeochemical processes that transform lead into recalcitrant precipitates of phosphate, sulfide, and carbonate, in a genetic, metabolic, and systematics context as they relate to application in both laboratory and field immobilization of environmental lead. Specifically, we focus on microbial functionalities of phosphate solubilization, sulfate reduction, and carbonate synthesis related to their respective mechanisms that immobilize lead through biomineralization and biosorption. The contributions of specific microbes, both single isolates or consortia, to actual or potential applications in environmental remediation are discussed. While many of the approaches are successful under carefully controlled laboratory conditions, field application requires optimization for a host of variables, including microbial competitiveness, soil physical and chemical parameters, metal concentrations, and co-contaminants. This review challenges the reader to consider bioremediation approaches that maximize microbial competitiveness, metabolism, and the associated molecular mechanisms for future engineering applications. Ultimately, we outline important research directions to bridge future scientific research activities with practical applications for bioremediation of lead and other toxic metals in environmental systems.

Experimental Study on Silt Soil Improved by Microbial Solidification with the Use of Lignin

At present, in the field of geotechnical engineering and agricultural production, with increasingly serious pollution an environmentally friendly and efficient means is urgently needed to improve the soil mass. This paper mainly studied the microbial induced calcium carbonate precipitation (MICP) technology and the combined effect of MICP technology and lignin on the improvement of silt in the Beijing area. Through unconfined compressive strength and dynamic triaxial test methods, samples improved by microorganisms were studied to obtain the optimal values of cement concentration and lignin under these two test schemes. The results show that after the incubation time of Sporosarcina pasteurii reached 24 h, the OD600 value was 1.7-2.0 and the activity value (U) was 930-1000 mM ms/min. In the unconfined static pressure strength test, after MICP treatment the optimal concentration of cementitious solution for constant temperature and humidity samples and constant-temperature immersion samples was 1.25 mol/L. The compressive strength of the constant temperature and humidity sample was 1.73 MPa, and the compressive strength of the constant-temperature immersion sample was 3.62 Mpa. At the concentration of 1.25 mol/L of cement solution, MICP technology combined with lignin could improve the constant temperature and humidity silt sample. The optimal addition ratio of lignin was 4%, and its compressive strength was 1.9 MPa. The optimal lignin addition ratio of the sample soaked at a constant temperature was 3%, and the compressive strength was 4.84 MPa. In the dynamic triaxial multi-stage cyclic load test, the optimal concentration of cementation solution for the constant temperature and humidity sample after MICP treatment was 1.0 mol/L, and the failure was mainly inclined cracks. However, in the condition of joint improvement of MICP and lignin, the sample mainly had a drum-shaped deformation, the optimal lignin addition ratio was 4%, and the maximum axial load that the sample could bear was 306.08 N. When the axial dynamic load reached 300 N, the strain accumulation of the 4% group was only 2.3 mm. In this paper, lignin, an ecofriendly material, was introduced on the basis of MICP technology. According to the failure shape and relevant results of the sample, the addition of lignin was beneficial for the improvement of the compressive strength of the sample.

Multiple heavy metal immobilization and strength improvement of contaminated soil using bio-mediated calcite precipitation technique

Bio-mediated calcite precipitation potential for multiple heavy metal immobilization in contaminated soils at industrial, waste dump, abandoned mine, and landfill sites is not explored yet. This study includes investigation of bio-mediated calcite precipitation for strength improvement and immobilization of heavy metals, specifically lead (Pb), zinc (Zn), and hexavalent chromium (Cr(VI)), in contaminated soils. Firstly, the toxicity resistance of bacteria against different concentrations (1000, 2000, 3000, 4000, and 5000 mg/l) of each heavy metals was investigated and observed that Pb and Cr were less toxic to Sporosarcina pasteurii than Zn. The poorly graded sand was spiked with 333-2000 mg/kg concentrations of a selected individual or mixed metal solutions, i.e., 1000 mg/kg and 2000 mg/kg individual concentrations of Pb, Zn, and Cr(VI); 500 mg/kg and 1000 mg/kg concentration of each metal in "Pb and Zn," "Pb and Cr(VI)," and "Zn and Cr(VI)" mixture of heavy metals; and 333 mg/kg and 666 mg/kg concentration of each metal in "Pb, Zn, and Cr(VI)" mixed metal concentration. Contaminated soil was biotreated with Sporosarcina pasteurii and cementation (a solution of urea and calcium chloride dihydrate) solutions for 18 days. Biocemented sand specimens were subjected to testing of hydraulic conductivity, ultrasonic pulse velocity (UPV), unconfined compressive strength (UCS), calcite content, pH, toxicity characteristic leaching procedure (TCLP), X-ray diffraction (XRD), and scanning electron microscopy (SEM). The heavy metal contaminated samples showed decrease in hydraulic conductivity and increase in UPV and UCS after biotreatment; however, the changes in engineering properties were found more moderate than clean biocemented sand. The conversion of Cr(VI) to Cr(III) followed by Cr₂O₃ precipitation in calcite lattice was observed. Zn was precipitated as smithsonite (ZnCO₃), while no Pb precipitate was identified in XRD results. TCLP leaching showed Pb and Cr immobilized proportional to calcite precipitated amount, and higher calcite amounts yielded levels within regulatory limits. Pb and Cr(VI) immobilization up to 92 % and 94 % was achieved, respectively, in contaminated biocemented sand. Zn was found completely leachable as smithsonite is only stable down to pH~5, and strongly acidic TCLP solution reversed all immobilization at natural soil pH~8-9.

Native Bacterial Community Convergence in Augmented and Stimulated Ureolytic MICP Biocementation

Microbially induced calcite precipitation is a biomineralization process with numerous civil engineering and ground improvement applications. In replicate soil columns, the efficacy and microbial composition of soil bioaugmented with the ureolytic bacterium Sporosarcina pasteurii were compared to a biostimulation method that enriches native ureolytic soil bacteria in situ under conditions analogous to field implementation. The selective enrichment resulting from sequential stimulation treatments strongly selected for Firmicutes (>97%), with Sporosarcina and Lysinibacillus comprising 60 to 94% of high-throughput 16S rDNA sequences in each suspended community sample. Seven species of the former and two of the latter were present in greater than 10% abundance at different times, demonstrating unexpected within-genus diversity and robustness in the suspended phase of this highly selective environment. Based on longer 16S sequences, it was inferred that augmented S. pasteurii competed poorly with natural bacteria, decreasing to below detection after nine treatments, while the native microbial community was enriched to approximately that present in the stimulated columns. These analyses were corroborated by the observed convergence in bulk ureolytic rates and calcite contents between techniques. However, a 10-fold discrepancy between the observed cell density and an activity-based estimate indicates the attached community, uncharacterized despite efforts, substantially contributes to bulk behavior.

Biogeochemical Modelling of Uranium Immobilization and Aquifer Remediation Strategies Near NCCP Sludge Storage Facilities

Nitrate is a substance which influences the prevailing redox conditions in groundwater, and in turn the behaviour of U. The study of groundwater in an area with low-level radioactive sludge storage facilities has shown their contamination with sulphate and nitrate anions, uranium, and some associated metals. The uranyl ion content in the most contaminated NO3–Cl–SO4–Na borehole is 2000 times higher (1.58 mg/L) than that in the background water. At the same time, assessment of the main physiological groups of microorganisms showed a maximum number of denitrifying and sulphate-reducing bacteria (e.g., Sulfurimonas) in the water from the same borehole. Biogenic factors of radionuclide immobilization on sandy rocks of upper aquifers have been experimentally investigated. Different reduction rates of NO3−, SO42−, Fe(III) and U(VI) with stimulated microbial activity were dependent on the pollution degree. Moreover, 16S rRNA gene analysis of the microbial community after whey addition revealed a significant decrease in microbial diversity and the activation of nonspecific nitrate-reducing bacteria (genera Rhodococcus and Rhodobacter). The second influential factor can be identified as the formation of microbial biofilms on the sandy loam samples, which has a positive effect on U sorption (an increase in Kd value is up to 35%). As PHREEQC physicochemical modelling numerically confirmed, the third most influential factor that drives U mobility is the biogenic-mediated formation of a sulphide redox buffer. This study brings important information, which helps to assess the long-term stability of U in the environment of radioactive sludge storage facilities.