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Svantesson M, Olausson H, Eklund A, Thordstein M. Get a New Perspective on EEG: Convolutional Neural Network Encoders for Parametric t-SNE. Brain Sci 2023; 13:453. [PMID: 36979263 PMCID: PMC10046040 DOI: 10.3390/brainsci13030453] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 03/03/2023] [Accepted: 03/04/2023] [Indexed: 03/09/2023] Open
Abstract
t-distributed stochastic neighbor embedding (t-SNE) is a method for reducing high-dimensional data to a low-dimensional representation, and is mostly used for visualizing data. In parametric t-SNE, a neural network learns to reproduce this mapping. When used for EEG analysis, the data are usually first transformed into a set of features, but it is not known which features are optimal. The principle of t-SNE was used to train convolutional neural network (CNN) encoders to learn to produce both a high- and a low-dimensional representation, eliminating the need for feature engineering. To evaluate the method, the Temple University EEG Corpus was used to create three datasets with distinct EEG characters: (1) wakefulness and sleep; (2) interictal epileptiform discharges; and (3) seizure activity. The CNN encoders produced low-dimensional representations of the datasets with a structure that conformed well to the EEG characters and generalized to new data. Compared to parametric t-SNE for either a short-time Fourier transform or wavelet representation of the datasets, the developed CNN encoders performed equally well in separating categories, as assessed by support vector machines. The CNN encoders generally produced a higher degree of clustering, both visually and in the number of clusters detected by k-means clustering. The developed principle is promising and could be further developed to create general tools for exploring relations in EEG data.
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Affiliation(s)
- Mats Svantesson
- Department of Clinical Neurophysiology, University Hospital of Linköping, 58185 Linköping, Sweden
- Center for Social and Affective Neuroscience, Linköping University, 58183 Linköping, Sweden
- Center for Medical Image Science and Visualization, Linköping University, 58183 Linköping, Sweden
- Department of Biomedical and Clinical Sciences, Linköping University, 58183 Linköping, Sweden
| | - Håkan Olausson
- Department of Clinical Neurophysiology, University Hospital of Linköping, 58185 Linköping, Sweden
- Center for Social and Affective Neuroscience, Linköping University, 58183 Linköping, Sweden
- Department of Biomedical and Clinical Sciences, Linköping University, 58183 Linköping, Sweden
| | - Anders Eklund
- Center for Medical Image Science and Visualization, Linköping University, 58183 Linköping, Sweden
- Department of Biomedical Engineering, Linköping University, 58183 Linköping, Sweden
- Division of Statistics & Machine Learning, Department of Computer and Information Science, Linköping University, 58183 Linköping, Sweden
| | - Magnus Thordstein
- Department of Clinical Neurophysiology, University Hospital of Linköping, 58185 Linköping, Sweden
- Center for Medical Image Science and Visualization, Linköping University, 58183 Linköping, Sweden
- Department of Biomedical and Clinical Sciences, Linköping University, 58183 Linköping, Sweden
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Tian Z, Li D, Yang Y, Hou F, Yang Z, Song Y, Gao Q. A Novel Domain Adversarial Networks Based on 3D-LSTM and Local Domain Discriminator for Hearing-Impaired Emotion Recognition. IEEE J Biomed Health Inform 2023; 27:363-373. [PMID: 36201412 DOI: 10.1109/jbhi.2022.3212475] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Recent research on emotion recognition suggests that deep network-based adversarial learning has an ability to solve the cross-subject problem of emotion recognition. This study constructed a hearing-impaired electroencephalography (EEG) emotion dataset containing three emotions (positive, neutral, and negative) in 15 subjects. The emotional domain adversarial neural network (EDANN) was carried out to identify hearing-impaired subjects' emotions by learning hidden emotion information between the labeled data and the data with no-label. For the input data, we propose a spatial filter matrix to reduce the overfitting of the training data. A feature extraction network 3DLSTM-ConvNET was used to extract comprehensive emotional information from the time, frequency, and spatial dimensions. Moreover, emotion local domain discriminator and emotion film group local domain discriminator were added to reduce the distribution distance between the same kinds of emotions and different film groups, respectively. According to the experimental results, the average accuracy of subject-dependent is 0.984 (STD: 0.011), and that of subject-independent is 0.679 (STD: 0.140). In addition, by analyzing the discrimination characteristics, we found that the brain regions with emotional recognition in the hearing-impaired are distributed in the wider areas of the parietal and occipital lobes, which may be caused by visual processing.
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Hodassman S, Meir Y, Kisos K, Ben-Noam I, Tugendhaft Y, Goldental A, Vardi R, Kanter I. Brain inspired neuronal silencing mechanism to enable reliable sequence identification. Sci Rep 2022; 12:16003. [PMID: 36175466 PMCID: PMC9523036 DOI: 10.1038/s41598-022-20337-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Accepted: 09/12/2022] [Indexed: 11/25/2022] Open
Abstract
Real-time sequence identification is a core use-case of artificial neural networks (ANNs), ranging from recognizing temporal events to identifying verification codes. Existing methods apply recurrent neural networks, which suffer from training difficulties; however, performing this function without feedback loops remains a challenge. Here, we present an experimental neuronal long-term plasticity mechanism for high-precision feedforward sequence identification networks (ID-nets) without feedback loops, wherein input objects have a given order and timing. This mechanism temporarily silences neurons following their recent spiking activity. Therefore, transitory objects act on different dynamically created feedforward sub-networks. ID-nets are demonstrated to reliably identify 10 handwritten digit sequences, and are generalized to deep convolutional ANNs with continuous activation nodes trained on image sequences. Counterintuitively, their classification performance, even with a limited number of training examples, is high for sequences but low for individual objects. ID-nets are also implemented for writer-dependent recognition, and suggested as a cryptographic tool for encrypted authentication. The presented mechanism opens new horizons for advanced ANN algorithms.
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Affiliation(s)
- Shiri Hodassman
- Department of Physics, Bar-Ilan University, 52900, Ramat-Gan, Israel
| | - Yuval Meir
- Department of Physics, Bar-Ilan University, 52900, Ramat-Gan, Israel
| | - Karin Kisos
- Department of Physics, Bar-Ilan University, 52900, Ramat-Gan, Israel
| | - Itamar Ben-Noam
- Department of Physics, Bar-Ilan University, 52900, Ramat-Gan, Israel
| | - Yael Tugendhaft
- Department of Physics, Bar-Ilan University, 52900, Ramat-Gan, Israel
| | - Amir Goldental
- Department of Physics, Bar-Ilan University, 52900, Ramat-Gan, Israel
| | - Roni Vardi
- Gonda Interdisciplinary Brain Research Center, Bar-Ilan University, 52900, Ramat-Gan, Israel
| | - Ido Kanter
- Department of Physics, Bar-Ilan University, 52900, Ramat-Gan, Israel. .,Gonda Interdisciplinary Brain Research Center, Bar-Ilan University, 52900, Ramat-Gan, Israel.
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