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Samak ZA, Clatworthy P, Mirmehdi M. Automatic prediction of stroke treatment outcomes: latest advances and perspectives. Biomed Eng Lett 2025; 15:467-488. [PMID: 40271393 PMCID: PMC12011689 DOI: 10.1007/s13534-025-00462-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2024] [Revised: 01/24/2025] [Accepted: 01/26/2025] [Indexed: 04/25/2025] Open
Abstract
Stroke is a major global health problem that causes mortality and morbidity. Predicting the outcomes of stroke intervention can facilitate clinical decision-making and improve patient care. Engaging and developing deep learning techniques can help to analyse large and diverse medical data, including brain scans, medical reports, and other sensor information, such as EEG, ECG, EMG, and so on. Despite the common data standardisation challenge within the medical image analysis domain, the future of deep learning in stroke outcome prediction lies in using multimodal information, including final infarct data, to achieve better prediction of long-term functional outcomes. This article provides a broad review of recent advances and applications of deep learning in the prediction of stroke outcomes, including (i) the data and models used, (ii) the prediction tasks and measures of success, (iii) the current challenges and limitations, and (iv) future directions and potential benefits. This comprehensive review aims to provide researchers, clinicians, and policy makers with an up-to-date understanding of this rapidly evolving and promising field.
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Affiliation(s)
- Zeynel A. Samak
- Department of Computer Engineering, Adiyaman University, 02040 Adiyaman, Turkey
| | - Philip Clatworthy
- Translational Health Sciences, University of Bristol, Bristol, BS8 1UD UK
- Stroke Neurology, Southmead Hospital, North Bristol NHS Trust, Street, Bristol, BS8 1UD UK
| | - Majid Mirmehdi
- School of Computer Science, University of Bristol, Bristol, BS8 1UB UK
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Bogey C, Rouchaud A, Gentric JC, Beaufreton E, Timsit S, Clarencon F, Caroff J, Bourcier R, Zhu F, Dargazanli C, Hak JF, Boulouis G, Ifergan H, Pop R, Forestier G, Lapergue B, Ognard J. Predictive models of clinical outcome of endovascular treatment for anterior circulation stroke using machine learning. J Neurosci Methods 2025; 416:110376. [PMID: 39884441 DOI: 10.1016/j.jneumeth.2025.110376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2024] [Revised: 01/16/2025] [Accepted: 01/23/2025] [Indexed: 02/01/2025]
Abstract
BACKGROUND AND PURPOSE Mechanical Thrombectomy (MT) has recently become the standard of care for anterior circulation stroke with large vessel occlusion, but predictive factors of successful MT are still not clearly defined. To tailor treatment individually for each patient, the aim of this study was to evaluate the performances of Machine Learning to predict clinical outcome (mRS) at 3 months after MT. MATERIAL AND METHODS From the ETIS French prospective multicenter registry, data from patients who underwent MT for anterior circulation stroke with large vessel occlusion between January 2018 and December 2020 were extracted. Three machine learning models (Support Vector Machine, Random Forest and XGBoost) have been trained with clinical, biological and brain imaging data available in emergency conditions from the cohort of patients treated from 2018 to 2019. Models' performances to predict good outcome (3-months mRS <3) were evaluated on patients treated in 2020. Performances were evaluated with AUC, accuracy, sensitivity and specificity, then ROC curves AUC were compared with the best performing model. RESULTS 4297 patients were included, 1737 (40 %) with good outcome and 2560 (60 %) with bad outcome were used to train models and 599 patients treated in 2020 were used to evaluate their performances. The best model was obtained with XGBoost: AUC = 0.77, accuracy = 69.3 % but no statistically significant difference existed between models. CONCLUSION Our study shows satisfying performances of machine learning to predict clinical outcome after MT using data easily available at initial diagnosis and before the decision to treat.
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Affiliation(s)
- Clement Bogey
- Neuroradiology Department, Limoges University Hospital, Limoges, France
| | - Aymeric Rouchaud
- Limoges University Hospital, Department of radiology, Limoges, France; University of Limoges, Department of radiology, Limoges F-87000, France
| | - Jean-Christophe Gentric
- University of Brest, GETBO, INSERM UMR1304, Neuroradiology, University Hospital of Brest, Brest, France
| | - Edouard Beaufreton
- University of Brest, GETBO, INSERM UMR1304, Neuroradiology, University Hospital of Brest, Brest, France
| | - Serge Timsit
- University of Brest, INSERM UMR1078, Neurology, University Hospital of Brest, Brest, France
| | - Frederic Clarencon
- Department of Neuroradiology, La Pitie Salpetrière Hospital, Paris, France
| | - Jildaz Caroff
- NEURI Vascular Center, Bicetre Hospital Interventional Neuroradiology, Le Kremlin-Bicetre, France
| | - Romain Bourcier
- Department of Neuroradiology, Nantes University Hospital, Tours, France
| | - François Zhu
- Department of Neuroradiology, Nancy University Hospital, Tours, France
| | - Cyril Dargazanli
- Department of Neuroradiology, Montpellier University Hospital, Tours, France
| | - Jean-François Hak
- Department of Neuroradiology, Marseille University Hospital, Tours, France
| | - Gregoire Boulouis
- Department of Neuroradiology, Tours University Hospital, Tours, France
| | - Heloise Ifergan
- Department of Neuroradiology, Tours University Hospital, Tours, France
| | - Raoul Pop
- Department of Neuroradiology, Strasbourg University Hospital, Tours, France
| | - Geraud Forestier
- Neuroradiology Department, Limoges University Hospital, Limoges, France
| | | | - Julien Ognard
- University of Brest, LATIM, INSERM UMR1101, Brest France; Department of Radiology, Mayo Clinic Rochester, MN, USA.
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Diprose JP, Diprose WK, Chien TY, Wang MTM, McFetridge A, Tarr GP, Ghate K, Beharry J, Hong J, Wu T, Campbell D, Barber PA. Deep learning on pre-procedural computed tomography and clinical data predicts outcome following stroke thrombectomy. J Neurointerv Surg 2025; 17:266-271. [PMID: 38527795 DOI: 10.1136/jnis-2023-021154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Accepted: 02/23/2024] [Indexed: 03/27/2024]
Abstract
BACKGROUND Deep learning using clinical and imaging data may improve pre-treatment prognostication in ischemic stroke patients undergoing endovascular thrombectomy (EVT). METHODS Deep learning models were trained and tested on baseline clinical and imaging (CT head and CT angiography) data to predict 3-month functional outcomes in stroke patients who underwent EVT. Classical machine learning models (logistic regression and random forest classifiers) were constructed to compare their performance with the deep learning models. An external validation dataset was used to validate the models. The MR PREDICTS prognostic tool was tested on the external validation set, and its performance was compared with the deep learning and classical machine learning models. RESULTS A total of 975 patients (550 men; mean±SD age 67.5±15.1 years) were studied with 778 patients in the model development cohort and 197 in the external validation cohort. The deep learning model trained on baseline CT and clinical data, and the logistic regression model (clinical data alone) demonstrated the strongest discriminative abilities for 3-month functional outcome and were comparable (AUC 0.811 vs 0.817, Q=0.82). Both models exhibited superior prognostic performance than the other deep learning (CT head alone, CT head, and CT angiography) and MR PREDICTS models (all Q<0.05). CONCLUSIONS The discriminative performance of deep learning for predicting functional independence was comparable to logistic regression. Future studies should focus on whether incorporating procedural and post-procedural data significantly improves model performance.
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Affiliation(s)
| | - William K Diprose
- Department of Medicine, Faculty of Medical and Health Sciences, University of Auckland, Auckland, New Zealand
| | | | - Michael T M Wang
- Department of Medicine, Faculty of Medical and Health Sciences, University of Auckland, Auckland, New Zealand
| | - Andrew McFetridge
- Department of Radiology, Auckland City Hospital, Auckland, New Zealand
| | - Gregory P Tarr
- Department of Radiology, Auckland City Hospital, Auckland, New Zealand
| | - Kaustubha Ghate
- Department of Neurology, Auckland City Hospital, Auckland, New Zealand
| | - James Beharry
- Department of Neurology, Christchurch Hospital, Christchurch, New Zealand
| | - JaeBeom Hong
- Department of Neurology, Auckland City Hospital, Auckland, New Zealand
| | - Teddy Wu
- Department of Neurology, Christchurch Hospital, Christchurch, New Zealand
| | - Doug Campbell
- Department of Anaesthesia and Perioperative Medicine, Auckland City Hospital, Auckland, New Zealand
| | - P Alan Barber
- Department of Medicine, Faculty of Medical and Health Sciences, University of Auckland, Auckland, New Zealand
- Department of Neurology, Auckland City Hospital, Auckland, New Zealand
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Hoffman H, Sims JJ, Inoa-Acosta V, Hoit D, Arthur AS, Draytsel DY, Kim Y, Goyal N. Machine learning for clinical outcome prediction in cerebrovascular and endovascular neurosurgery: systematic review and meta-analysis. J Neurointerv Surg 2025:jnis-2024-021759. [PMID: 38772570 DOI: 10.1136/jnis-2024-021759] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2024] [Accepted: 04/28/2024] [Indexed: 05/23/2024]
Abstract
BACKGROUND Machine learning (ML) may be superior to traditional methods for clinical outcome prediction. We sought to systematically review the literature on ML for clinical outcome prediction in cerebrovascular and endovascular neurosurgery. METHODS A comprehensive literature search was performed, and original studies of patients undergoing cerebrovascular surgeries or endovascular procedures that developed a supervised ML model to predict a postoperative outcome or complication were included. RESULTS A total of 60 studies predicting 71 outcomes were included. Most cohorts were derived from single institutions (66.7%). The studies included stroke (32), subarachnoid hemorrhage ((SAH) 16), unruptured aneurysm (7), arteriovenous malformation (4), and cavernous malformation (1). Random forest was the best performing model in 12 studies (20%) followed by XGBoost (13.3%). Among 42 studies in which the ML model was compared with a standard statistical model, ML was superior in 33 (78.6%). Of 10 studies in which the ML model was compared with a non-ML clinical prediction model, ML was superior in nine (90%). External validation was performed in 10 studies (16.7%). In studies predicting functional outcome after mechanical thrombectomy the pooled area under the receiver operator characteristics curve (AUROC) of the test set performances was 0.84 (95% CI 0.79 to 0.88). For studies predicting outcomes after SAH, the pooled AUROCs for functional outcomes and delayed cerebral ischemia were 0.89 (95% CI 0.76 to 0.95) and 0.90 (95% CI 0.66 to 0.98), respectively. CONCLUSION ML performs favorably for clinical outcome prediction in cerebrovascular and endovascular neurosurgery. However, multicenter studies with external validation are needed to ensure the generalizability of these findings.
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Affiliation(s)
- Haydn Hoffman
- Semmes-Murphey Neurologic and Spine Institute, Memphis, Tennessee, USA
| | - Jason J Sims
- The University of Tennessee Health Science Center, Memphis, Tennessee, USA
| | - Violiza Inoa-Acosta
- Semmes-Murphey Neurologic and Spine Institute, Memphis, Tennessee, USA
- Neurology, University of Tennessee Health Science Center, Memphis, Tennessee, USA
| | - Daniel Hoit
- Neurosurgery, University of Tennessee Health Science Center, Memphis, Tennessee, USA
| | - Adam S Arthur
- Semmes-Murphey Neurologic and Spine Institute, Memphis, Tennessee, USA
- Neurosurgery, University of Tennessee Health Science Center, Memphis, Tennessee, USA
| | - Dan Y Draytsel
- SUNY Upstate Medical University, Syracuse, New York, USA
| | - YeonSoo Kim
- SUNY Upstate Medical University, Syracuse, New York, USA
| | - Nitin Goyal
- Semmes-Murphey Neurologic and Spine Institute, Memphis, Tennessee, USA
- Neurology, University of Tennessee Health Science Center, Memphis, Tennessee, USA
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Yang C, Wang J, Zhang R, Lu Y, Hu W, Yang P, Jiang Y, Hong W, Shan R, Xu Y, Jiang Y. Development of a PMGDNI model to predict the probability of three-month unfavorable outcome acute ischemic stroke after endovascular treatment: a cohort study. BMC Neurol 2024; 24:472. [PMID: 39639208 PMCID: PMC11619606 DOI: 10.1186/s12883-024-03960-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Accepted: 11/12/2024] [Indexed: 12/07/2024] Open
Abstract
BACKGROUND Patients with acute large vessel occlusion stroke (ALVOS) may exhibit considerable variability in clinical outcomes following mechanical thrombectomy (MT). This study aimed to develop a novel statistical model predicting functional independence three months post-endovascular treatment for acute stroke and validate its performance within the cohort. METHOD Consecutive patients undergoing endovascular treatment for acute stroke with large vessel occlusion were randomly divided into a modeling group and a validation group in a 7:3 ratio. Independent risk factors were identified through LASSO regression and multivariate logistic regression analyses, leading to the development of a prognostic model whose performance was rigorously validated. RESULTS A total of 913 patients were screened, with 893 cases included. The modeling group comprised 625 cases, and the validation group included 268 cases. Identified independent factors for adverse outcomes after endovascular treatment of acute ischemic stroke (AIS) were pneumonia (OR = 4.517, 95% CI = 2.916-7.101, P < 0.001), mechanical ventilation (OR = 2.449, 95% CI = 1.475-5.148, P = 0.001), admission GCS ≥ 8 (OR = 0.365, 95% CI = 0.167-0.745, P = 0.008), dysphagia (OR = 2.074, 95% CI = 1.375-3.126, P < 0.001), and 72-hour highest Na ≥ 145 (OR = 2.794, 95% CI = 1.508-5.439, P = 0.002), along with intracranial hemorrhage (OR = 2.453, 95% CI = 1.408-4.396, P = 0.002). These factors were illustrated in a PMGDNI column chart. The area under the ROC curve for the modeling group was 82.5% (95% CI = 0.793-0.857), and for the validation group, it was 83.7% (95% CI = 0.789-0.885). The Hosmer-Lemeshow test indicates that there is no statistically significant difference (P > 0.05) between the predicted and actual probabilities of adverse outcomes. The clinical decision curve demonstrated optimal net benefits at thresholds of 0.30-1.00 and 0.25-1.00 for both training and validation sets, indicating effective clinical efficacy within these probability ranges. CONCLUSION We have successfully developed a new predictive model enhancing the accuracy of prognostic assessments for acute ischemic stroke following EVT. It provides an individual, visual, and precise prediction of the risk probability of a 90-day unfavorable outcome.
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Affiliation(s)
- Chao Yang
- Department of Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Jingying Wang
- Department of Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Ruihai Zhang
- Department of Neurology, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Yiyao Lu
- Department of Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Wei Hu
- Department of Neurology, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Peng Yang
- Department of Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Yiqing Jiang
- Department of Neurology, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Weijun Hong
- Department of Neurology, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
| | - Renfei Shan
- Department of Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China
- Department of Critical Care Medicine and Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated with Wenzhou Medical University, No.150, XiMen Street, Taizhou, China
| | - Yinghe Xu
- Department of Critical Care Medicine and Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated with Wenzhou Medical University, No.150, XiMen Street, Taizhou, China
| | - Yongpo Jiang
- Department of Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China.
- Department of Neurosurgery, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Taizhou, China.
- Department of Critical Care Medicine and Emergency Medicine, Taizhou Hospital of Zhejiang Province Affiliated with Wenzhou Medical University, No.150, XiMen Street, Taizhou, China.
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Abdollahifard S, Farrokhi A, Mowla A, Liebeskind DS. Performance Metrics, Algorithms, and Applications of Artificial Intelligence in Vascular and Interventional Neurology: A Review of Basic Elements. Neurol Clin 2024; 42:633-650. [PMID: 38937033 DOI: 10.1016/j.ncl.2024.03.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/29/2024]
Abstract
Artificial intelligence (AI) is currently being used as a routine tool for day-to-day activity. Medicine is not an exception to the growing usage of AI in various scientific fields. Vascular and interventional neurology deal with diseases that require early diagnosis and appropriate intervention, which are crucial to saving patients' lives. In these settings, AI can be an extra pair of hands for physicians or in conditions where there is a shortage of clinical experts. In this article, the authors have reviewed the common metrics used in interpreting the performance of models and common algorithms used in this field.
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Affiliation(s)
- Saeed Abdollahifard
- School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran; Research Center for Neuromodulation and Pain, Shiraz, Iran
| | | | - Ashkan Mowla
- Division of Stroke and Endovascular Neurosurgery, Department of Neurological Surgery, Keck School of Medicine, University of Southern California (USC), Los Angeles, CA, USA
| | - David S Liebeskind
- UCLA Department of Neurology, Neurovascular Imaging Research Core, UCLA Comprehensive Stroke Center, University of California Los Angeles(UCLA), CA, USA.
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Zeng M, Smith L, Bird A, Trinh VQN, Bacchi S, Harvey J, Jenkinson M, Scroop R, Kleinig T, Jannes J, Palmer LJ. Predictions for functional outcome and mortality in acute ischaemic stroke following successful endovascular thrombectomy. BMJ Neurol Open 2024; 6:e000707. [PMID: 38932996 PMCID: PMC11202712 DOI: 10.1136/bmjno-2024-000707] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2024] [Accepted: 06/10/2024] [Indexed: 06/28/2024] Open
Abstract
Background Accurate outcome predictions for patients who had ischaemic stroke with successful reperfusion after endovascular thrombectomy (EVT) may improve patient treatment and care. Our study developed prediction models for key clinical outcomes in patients with successful reperfusion following EVT in an Australian population. Methods The study included all patients who had ischaemic stroke with occlusion in the proximal anterior cerebral circulation and successful reperfusion post-EVT over a 7-year period. Multivariable logistic regression and Cox regression models, incorporating bootstrap and multiple imputation techniques, were used to identify predictors and develop models for key clinical outcomes: 3-month poor functional status; 30-day, 1-year and 3-year mortality; survival time. Results A total of 978 patients were included in the analyses. Predictors associated with one or more poor outcomes include: older age (ORs for every 5-year increase: 1.22-1.40), higher premorbid functional modified Rankin Scale (ORs: 1.31-1.75), higher baseline National Institutes of Health Stroke Scale (ORs: 1.05-1.07) score, higher blood glucose (ORs: 1.08-1.19), larger core volume (ORs for every 10 mL increase: 1.10-1.22), pre-EVT thrombolytic therapy (ORs: 0.44-0.56), history of heart failure (outcome: 30-day mortality, OR=1.87), interhospital transfer (ORs: 1.42 to 1.53), non-rural/regional stroke onset (outcome: functional dependency, OR=0.64), longer onset-to-groin puncture time (outcome: 3-year mortality, OR=1.08) and atherosclerosis-caused stroke (outcome: functional dependency, OR=1.68). The models using these predictors demonstrated moderate predictive abilities (area under the receiver operating characteristic curve range: 0.752-0.796). Conclusion Our models using real-world predictors assessed at hospital admission showed satisfactory performance in predicting poor functional outcomes and short-term and long-term mortality for patients with successful reperfusion following EVT. These can be used to inform EVT treatment provision and consent.
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Affiliation(s)
- Minyan Zeng
- School of Public Health, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, South Australia, Australia
- Australian Institute for Machine Learning, Adelaide, South Australia, Australia
| | - Luke Smith
- School of Public Health, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, South Australia, Australia
- Australian Institute for Machine Learning, Adelaide, South Australia, Australia
| | - Alix Bird
- School of Public Health, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, South Australia, Australia
- Australian Institute for Machine Learning, Adelaide, South Australia, Australia
| | - Vincent Quoc-Nam Trinh
- School of Public Health, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, South Australia, Australia
- Australian Institute for Machine Learning, Adelaide, South Australia, Australia
| | - Stephen Bacchi
- Royal Adelaide Hospital, Adelaide, South Australia, Australia
| | - Jackson Harvey
- Royal Adelaide Hospital, Adelaide, South Australia, Australia
| | - Mark Jenkinson
- Australian Institute for Machine Learning, Adelaide, South Australia, Australia
- School of Computer and Mathematical Sciences, Faculty of Sciences, Engineering and Technology, The University of Adelaide, Adelaide, South Australia, Australia
- South Australian Health and Medical Research Institute, Adelaide, South Australia, Australia
| | - Rebecca Scroop
- Royal Adelaide Hospital, Adelaide, South Australia, Australia
| | - Timothy Kleinig
- Royal Adelaide Hospital, Adelaide, South Australia, Australia
| | - Jim Jannes
- Royal Adelaide Hospital, Adelaide, South Australia, Australia
| | - Lyle J Palmer
- School of Public Health, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, South Australia, Australia
- Australian Institute for Machine Learning, Adelaide, South Australia, Australia
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Ozkara BB, Karabacak M, Hoseinyazdi M, Dagher SA, Wang R, Karadon SY, Ucisik FE, Margetis K, Wintermark M, Yedavalli VS. Utilizing imaging parameters for functional outcome prediction in acute ischemic stroke: A machine learning study. J Neuroimaging 2024; 34:356-365. [PMID: 38430467 DOI: 10.1111/jon.13194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 02/07/2024] [Accepted: 02/09/2024] [Indexed: 03/03/2024] Open
Abstract
BACKGROUND AND PURPOSE We aimed to predict the functional outcome of acute ischemic stroke patients with anterior circulation large vessel occlusions (LVOs), irrespective of how they were treated or the severity of the stroke at admission, by only using imaging parameters in machine learning models. METHODS Consecutive adult patients with anterior circulation LVOs who were scanned with CT angiography (CTA) and CT perfusion were queried in this single-center, retrospective study. The favorable outcome was defined as a modified Rankin score (mRS) of 0-2 at 90 days. Predictor variables included only imaging parameters. CatBoost, XGBoost, and Random Forest were employed. Algorithms were evaluated using the area under the receiver operating characteristic curve (AUROC), the area under the precision-recall curve (AUPRC), accuracy, Brier score, recall, and precision. SHapley Additive exPlanations were implemented. RESULTS A total of 180 patients (102 female) were included, with a median age of 69.5. Ninety-two patients had an mRS between 0 and 2. The best algorithm in terms of AUROC was XGBoost (0.91). Furthermore, the XGBoost model exhibited a precision of 0.72, a recall of 0.81, an AUPRC of 0.83, an accuracy of 0.78, and a Brier score of 0.17. Multiphase CTA collateral score was the most significant feature in predicting the outcome. CONCLUSIONS Using only imaging parameters, our model had an AUROC of 0.91 which was superior to most previous studies, indicating that imaging parameters may be as accurate as conventional predictors. The multiphase CTA collateral score was the most predictive variable, highlighting the importance of collaterals.
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Affiliation(s)
- Burak B Ozkara
- Department of Neuroradiology, MD Anderson Cancer Center, Houston, Texas, USA
| | - Mert Karabacak
- Department of Neurosurgery, Mount Sinai Health System, New York, New York, USA
| | - Meisam Hoseinyazdi
- Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins Hospital, Baltimore, Maryland, USA
| | - Samir A Dagher
- Department of Neuroradiology, MD Anderson Cancer Center, Houston, Texas, USA
| | - Richard Wang
- Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins Hospital, Baltimore, Maryland, USA
| | - Sadik Y Karadon
- School of Medicine, Manisa Celal Bayar University, Manisa, Turkey
| | - F Eymen Ucisik
- Department of Neuroradiology, MD Anderson Cancer Center, Houston, Texas, USA
| | | | - Max Wintermark
- Department of Neuroradiology, MD Anderson Cancer Center, Houston, Texas, USA
| | - Vivek S Yedavalli
- Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins Hospital, Baltimore, Maryland, USA
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Budiarto A, Tsang KCH, Wilson AM, Sheikh A, Shah SA. Machine Learning-Based Asthma Attack Prediction Models From Routinely Collected Electronic Health Records: Systematic Scoping Review. JMIR AI 2023; 2:e46717. [PMID: 38875586 PMCID: PMC11041490 DOI: 10.2196/46717] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 09/28/2023] [Accepted: 10/09/2023] [Indexed: 06/16/2024]
Abstract
BACKGROUND An early warning tool to predict attacks could enhance asthma management and reduce the likelihood of serious consequences. Electronic health records (EHRs) providing access to historical data about patients with asthma coupled with machine learning (ML) provide an opportunity to develop such a tool. Several studies have developed ML-based tools to predict asthma attacks. OBJECTIVE This study aims to critically evaluate ML-based models derived using EHRs for the prediction of asthma attacks. METHODS We systematically searched PubMed and Scopus (the search period was between January 1, 2012, and January 31, 2023) for papers meeting the following inclusion criteria: (1) used EHR data as the main data source, (2) used asthma attack as the outcome, and (3) compared ML-based prediction models' performance. We excluded non-English papers and nonresearch papers, such as commentary and systematic review papers. In addition, we also excluded papers that did not provide any details about the respective ML approach and its result, including protocol papers. The selected studies were then summarized across multiple dimensions including data preprocessing methods, ML algorithms, model validation, model explainability, and model implementation. RESULTS Overall, 17 papers were included at the end of the selection process. There was considerable heterogeneity in how asthma attacks were defined. Of the 17 studies, 8 (47%) studies used routinely collected data both from primary care and secondary care practices together. Extreme imbalanced data was a notable issue in most studies (13/17, 76%), but only 38% (5/13) of them explicitly dealt with it in their data preprocessing pipeline. The gradient boosting-based method was the best ML method in 59% (10/17) of the studies. Of the 17 studies, 14 (82%) studies used a model explanation method to identify the most important predictors. None of the studies followed the standard reporting guidelines, and none were prospectively validated. CONCLUSIONS Our review indicates that this research field is still underdeveloped, given the limited body of evidence, heterogeneity of methods, lack of external validation, and suboptimally reported models. We highlighted several technical challenges (class imbalance, external validation, model explanation, and adherence to reporting guidelines to aid reproducibility) that need to be addressed to make progress toward clinical adoption.
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Affiliation(s)
- Arif Budiarto
- Asthma UK Center for Applied Research, Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
- Bioinformatics and Data Science Research Center, Bina Nusantara University, Jakarta, Indonesia
| | - Kevin C H Tsang
- Asthma UK Center for Applied Research, Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Andrew M Wilson
- Norwich Medical School, University of East Anglia, Norwich, United Kingdom
- Norfolk and Norwich University Hospital NHS Foundation Trust, Norwich, United Kingdom
| | - Aziz Sheikh
- Asthma UK Center for Applied Research, Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Syed Ahmar Shah
- Asthma UK Center for Applied Research, Usher Institute, University of Edinburgh, Edinburgh, United Kingdom
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