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Gharaviri A, Vigneswaran V, Vickneson K, Roney C, Corrado C, Coveney S, Maciunas K, Bodagh N, Klis M, Kotadia I, Sim I, Whitaker J, Bishop M, Niederer S, O'Neill M, Williams SE. Performance of atrial conduction velocity algorithms with error-prone clinical measurements for the identification of atrial fibrosis. Comput Biol Med 2025; 191:110119. [PMID: 40249991 DOI: 10.1016/j.compbiomed.2025.110119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2024] [Revised: 03/14/2025] [Accepted: 03/29/2025] [Indexed: 04/20/2025]
Abstract
INTRODUCTION Measuring conduction velocity, as a direct consequence of fibrosis, may provide a better method to localise fibrotic regions. This study aims to assess established cardiac conduction velocity calculation methods (Triangulation, Polynomial Surface Fitting, and Radial Basis Function) in identifying areas of conduction slowing caused by fibrosis, considering realistic measurement errors. METHOD Using a human left atrium computational model, atrial activation was simulated. Each conduction velocity calculation method's performance was evaluated under uncertainties in mapping point density, local activation time assignment and electrode locations by comparing calculated conduction velocity to ground truth conduction velocity derived from high-resolution simulated atrial activation. RESULTS All methods agreed well with ground truth conduction velocity maps in noise-free, high-density sampling conditions. However, Triangulation and Polynomial Surface Fitting methods showed susceptibility to noise, exhibiting significant errors under moderate to high noise levels. Radial Basis Function method demonstrated greater robustness to noise and reduced sampling density. Fibrotic region identification accuracy was high under ideal conditions for all methods but declined with increasing noise, with the Radial Basis Function method maintaining superior performance. CONCLUSION While all methods accurately estimate conduction velocity under ideal conditions, the Radial Basis Function method shows robustness to a realistic clinical noise, hence making it the most suitable to identify fibrotic regions.
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Affiliation(s)
- Ali Gharaviri
- Centre for Cardiovascular Science, The University of Edinburgh, UK; Heart Rhythm Research Brussels, Postgraduate Program in Cardiac Electrophysiology and Pacing, Vrije Universiteit Brussel, Brussels, Belgium; Heart Rhythm Management Centre, Universitair Ziekenhuis Brussel, Brussels, Belgium; Department of Electronics and Informatics (ETRO), Vrije Universiteit Brussel (VUB), 1050 Brussels, Belgium.
| | | | - Keeran Vickneson
- Centre for Cardiovascular Science, The University of Edinburgh, UK
| | - Caroline Roney
- School of Engineering and Materials Science, Queen Mary University of London, UK
| | - Cesare Corrado
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK; National Heart & Lung Institute - Faculty of Medicine, Imperial College London, UK
| | - Sam Coveney
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | | | - Neil Bodagh
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | - Magda Klis
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | - Irum Kotadia
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | - Iain Sim
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | - John Whitaker
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | - Martin Bishop
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | - Steven Niederer
- National Heart & Lung Institute - Faculty of Medicine, Imperial College London, UK
| | - Mark O'Neill
- School of Biomedical Engineering and Imaging Sciences, King's College London, UK
| | - Steven E Williams
- Centre for Cardiovascular Science, The University of Edinburgh, UK; School of Biomedical Engineering and Imaging Sciences, King's College London, UK.
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Zakeri Zafarghandi E, Jacquemet V. Prevalence of endoepicardial asynchrony and breakthrough patterns in a bilayer computational model of heterogeneous endoepicardial dissociation in the left atrium. PLoS One 2024; 19:e0314342. [PMID: 39576793 PMCID: PMC11584087 DOI: 10.1371/journal.pone.0314342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2024] [Accepted: 11/09/2024] [Indexed: 11/24/2024] Open
Abstract
BACKGROUND Transmural propagation and endoepicardial delays in activation observed in patients with atrial fibrillation are hypothesized to be associated with structural remodeling and endoepicardial dissociation. We aim to explore in a computational model how the distribution of delays and the rate of endo- and epicardial breakthrough activation patterns are affected by fibrosis and heterogeneous layer dissociation. METHODS A bilayer interconnected cable model of the left atrium was used to simulate a total of 4,800 episodes of atrial fibrillation on 960 different arrhythmogenic substrates with up to 30% epicardium-only diffuse fibrosis. Endoepicardial connections were heterogeneously distributed following random spatial patterns (characteristic length scale from 1.6 to 11.4 mm). Intermediate nodes were introduced in the transmural connections to enable the simulation of weaker coupling. This heterogeneous interlayer dissociation divided the atrial bilayer into connected and disconnected regions (from 27 to 48,000 connected regions). Activation time series were extracted in both layers to compute endoepicardial delays and detect breakthrough patterns. RESULTS Because of epicardial fibrosis, fibrillatory waves were driven by the endocardium, which generated endoepicardial delays. The delays in the connected regions (up to 10 ms, but generally < 5 ms) were prolonged by higher fibrosis density and weaker coupling. Disconnected regions allowed longer delays (> 15 ms) and promoted the occurrence of breakthroughs. These breakthroughs had short lifespan (< 10-20 ms) and were more prevalent with higher fibrosis density and heterogeneous dissociation (larger disconnected regions). Severe remodeling (< 500 connected regions) was needed to produce clinically reported rates (> 0.1 breakthrough/cycle/cm2). CONCLUSION Heterogeneous endoepicardial dissociation aggravates activation delays and increases the prevalence of epicardial breakthroughs.
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Affiliation(s)
- Elham Zakeri Zafarghandi
- Department of Pharmacology and Physiology, Faculty of Medicine, Université de Montréal, Montreal, Quebec, Canada
- Research Center, Hôpital du Sacré-Coeur de Montréal, Montreal, Quebec, Canada
| | - Vincent Jacquemet
- Department of Pharmacology and Physiology, Faculty of Medicine, Université de Montréal, Montreal, Quebec, Canada
- Research Center, Hôpital du Sacré-Coeur de Montréal, Montreal, Quebec, Canada
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Yi J, Chen K, Cao Y, Wen C, An L, Tong R, Wu X, Gao H. Up-regulated novel-miR-17 promotes hypothermic reperfusion arrhythmias by negatively targeting Gja1 and mediating activation of the PKC/c-Jun signaling pathway. J Mol Cell Cardiol 2024; 193:1-10. [PMID: 38789075 DOI: 10.1016/j.yjmcc.2024.05.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Revised: 05/18/2024] [Accepted: 05/21/2024] [Indexed: 05/26/2024]
Abstract
BACKGROUND Hypothermic ischemia-reperfusion arrhythmia is a common complication of cardiothoracic surgery under cardiopulmonary bypass, but few studies have focused on this type of arrhythmia. Our prior study discovered reduced myocardial Cx43 protein levels may be linked to hypothermic reperfusion arrhythmias. However, more detailed molecular mechanism research is required. METHOD The microRNA and mRNA expression levels in myocardial tissues were detected by real-time quantitative PCR (RT-qPCR). Besides, the occurrence of hypothermic reperfusion arrhythmias and changes in myocardial electrical conduction were assessed by electrocardiography and ventricular epicardial activation mapping. Furthermore, bioinformatics analysis, applying antagonists of miRNA, western blotting, immunohistochemistry, a dual luciferase assay, and pearson correlation analysis were performed to investigate the underlying molecular mechanisms. RESULTS The expression level of novel-miR-17 was up-regulated in hypothermic ischemia-reperfusion myocardial tissues. Inhibition of novel-miR-17 upregulation ameliorated cardiomyocyte edema, reduced apoptosis, increased myocardial electrical conduction velocity, and shortened the duration of reperfusion arrhythmias. Mechanistic studies showed that novel-miR-17 reduced the expression of Cx43 by directly targeting Gja1 while mediating the activation of the PKC/c-Jun signaling pathway. CONCLUSION Up-regulated novel-miR-17 is a newly discovered pro-arrhythmic microRNA that may serve as a potential therapeutic target and biomarker for hypothermic reperfusion arrhythmias.
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Affiliation(s)
- Jing Yi
- Department of Anesthesiology, The Affiliated Hospital of Guizhou Medical University, Guiyang, China; Translational Medicine Research Center of Guizhou Medical University, Guiyang, China
| | - Kaiyuan Chen
- Translational Medicine Research Center of Guizhou Medical University, Guiyang, China; School of Clinical Medicine, Guizhou Medical University, Guiyang, China
| | - Ying Cao
- Department of Anesthesiology, The Affiliated Jinyang Hospital of Guizhou Medical University, The Second People's Hospital of Guiyang, Guiyang, China
| | - Chunlei Wen
- Translational Medicine Research Center of Guizhou Medical University, Guiyang, China; School of Clinical Medicine, Guizhou Medical University, Guiyang, China
| | - Li An
- Department of Anesthesiology, The Affiliated Hospital of Guizhou Medical University, Guiyang, China; School of Clinical Medicine, Guizhou Medical University, Guiyang, China
| | - Rui Tong
- Translational Medicine Research Center of Guizhou Medical University, Guiyang, China
| | - Xueyan Wu
- Translational Medicine Research Center of Guizhou Medical University, Guiyang, China
| | - Hong Gao
- Department of Anesthesiology, The Affiliated Hospital of Guizhou Medical University, Guiyang, China.
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Jaffery OA, Melki L, Slabaugh G, Good WW, Roney CH. A Review of Personalised Cardiac Computational Modelling Using Electroanatomical Mapping Data. Arrhythm Electrophysiol Rev 2024; 13:e08. [PMID: 38807744 PMCID: PMC11131150 DOI: 10.15420/aer.2023.25] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 12/27/2023] [Indexed: 05/30/2024] Open
Abstract
Computational models of cardiac electrophysiology have gradually matured during the past few decades and are now being personalised to provide patient-specific therapy guidance for improving suboptimal treatment outcomes. The predictive features of these personalised electrophysiology models hold the promise of providing optimal treatment planning, which is currently limited in the clinic owing to reliance on a population-based or average patient approach. The generation of a personalised electrophysiology model entails a sequence of steps for which a range of activation mapping, calibration methods and therapy simulation pipelines have been suggested. However, the optimal methods that can potentially constitute a clinically relevant in silico treatment are still being investigated and face limitations, such as uncertainty of electroanatomical data recordings, generation and calibration of models within clinical timelines and requirements to validate or benchmark the recovered tissue parameters. This paper is aimed at reporting techniques on the personalisation of cardiac computational models, with a focus on calibrating cardiac tissue conductivity based on electroanatomical mapping data.
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Affiliation(s)
- Ovais A Jaffery
- School of Engineering and Materials Science, Queen Mary University of London London, UK
| | - Lea Melki
- R&D Algorithms, Acutus Medical Carlsbad, CA, US
| | - Gregory Slabaugh
- Digital Environment Research Institute, Queen Mary University of London London, UK
| | | | - Caroline H Roney
- School of Engineering and Materials Science, Queen Mary University of London London, UK
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Leenknegt L, Panfilov AV, Dierckx H. Impact of electrode orientation, myocardial wall thickness, and myofiber direction on intracardiac electrograms: numerical modeling and analytical solutions. Front Physiol 2023; 14:1213218. [PMID: 37492643 PMCID: PMC10364610 DOI: 10.3389/fphys.2023.1213218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Accepted: 06/14/2023] [Indexed: 07/27/2023] Open
Abstract
Intracardiac electrograms (iEGMs) are time traces of the electrical potential recorded close to the heart muscle. We calculate unipolar and bipolar iEGMs analytically for a myocardial slab with parallel myofibers and validate them against numerical bidomain simulations. The analytical solution obtained via the method of mirrors is an infinite series of arctangents. It goes beyond the solid angle theory and is in good agreement with the simulations, even though bath loading effects were not accounted for in the analytical calculation. At a large distance from the myocardium, iEGMs decay as 1/R (unipolar), 1/R 2 (bipolar and parallel), and 1/R 3 (bipolar and perpendicular to the endocardium). At the endocardial surface, there is a mathematical branch cut. Here, we show how a thicker myocardium generates iEGMs with larger amplitudes and how anisotropy affects the iEGM width and amplitude. If only the leading-order term of our expansion is retained, it can be determined how the conductivities of the bath, torso, myocardium, and myofiber direction together determine the iEGM amplitude. Our results will be useful in the quantitative interpretation of iEGMs, the selection of thresholds to characterize viable tissues, and for future inferences of tissue parameters.
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Affiliation(s)
- Lore Leenknegt
- Department of Mathematics, KU Leuven Campus KULAK, KU Leuven, Kortrijk, Belgium
- iSi Health–KU Leuven Institute of Physics-based Modeling for In Silico Health, KU Leuven, Leuven, Belgium
| | | | - Hans Dierckx
- Department of Mathematics, KU Leuven Campus KULAK, KU Leuven, Kortrijk, Belgium
- iSi Health–KU Leuven Institute of Physics-based Modeling for In Silico Health, KU Leuven, Leuven, Belgium
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Osorio D, Vraka A, Quesada A, Hornero F, Alcaraz R, Rieta JJ. An Efficient Hybrid Methodology for Local Activation Waves Detection under Complex Fractionated Atrial Electrograms of Atrial Fibrillation. SENSORS (BASEL, SWITZERLAND) 2022; 22:5345. [PMID: 35891025 PMCID: PMC9316244 DOI: 10.3390/s22145345] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 07/06/2022] [Accepted: 07/15/2022] [Indexed: 05/04/2023]
Abstract
Local activation waves (LAWs) detection in complex fractionated atrial electrograms (CFAEs) during catheter ablation (CA) of atrial fibrillation (AF), the commonest cardiac arrhythmia, is a complicated task due to their extreme variability and heterogeneity in amplitude and morphology. There are few published works on reliable LAWs detectors, which are efficient for regular or low fractionated bipolar electrograms (EGMs) but lack satisfactory results when CFAEs are analyzed. The aim of the present work is the development of a novel optimized method for LAWs detection in CFAEs in order to assist cardiac mapping and catheter ablation (CA) guidance. The database consists of 119 bipolar EGMs classified by AF types according to Wells' classification. The proposed method introduces an alternative Botteron's preprocessing technique targeting the slow and small-ampitude activations. The lower band-pass filter cut-off frequency is modified to 20 Hz, and a hyperbolic tangent function is applied over CFAEs. Detection is firstly performed through an amplitude-based threshold and an escalating cycle-length (CL) analysis. Activation time is calculated at each LAW's barycenter. Analysis is applied in five-second overlapping segments. LAWs were manually annotated by two experts and compared with algorithm-annotated LAWs. AF types I and II showed 100% accuracy and sensitivity. AF type III showed 92.77% accuracy and 95.30% sensitivity. The results of this study highlight the efficiency of the developed method in precisely detecting LAWs in CFAEs. Hence, it could be implemented on real-time mapping devices and used during CA, providing robust detection results regardless of the fractionation degree of the analyzed recordings.
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Affiliation(s)
- Diego Osorio
- BioMIT.org, Electronic Engineering Department, Universitat Politecnica de Valencia, 46022 Valencia, Spain; (D.O.); (A.V.)
| | - Aikaterini Vraka
- BioMIT.org, Electronic Engineering Department, Universitat Politecnica de Valencia, 46022 Valencia, Spain; (D.O.); (A.V.)
| | - Aurelio Quesada
- Arrhythmia Unit, Cardiology Department, General University Hospital Consortium of Valencia, 46014 Valencia, Spain;
| | - Fernando Hornero
- Cardiovascular Surgery Department, Hospital Clínico Universitario de Valencia, 46010 Valencia, Spain;
| | - Raúl Alcaraz
- Research Group in Electronic, Biomedical and Telecommunication Engineering, University of Castilla-La Mancha, 16071 Cuenca, Spain;
| | - José J. Rieta
- BioMIT.org, Electronic Engineering Department, Universitat Politecnica de Valencia, 46022 Valencia, Spain; (D.O.); (A.V.)
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