Metatranscriptomic Analysis of Corals Inoculated With Tolerant and Non-Tolerant Symbiont Exposed to High Temperature and Light Stress

Transcription of genes involved in bleaching of a coral reef species Acropora downingi (Wallace, 1999) in response to high temperature

Anthropogenic-induced global warming poses a significant threat to coral reef ecosystems worldwide. However, certain species within the Persian Gulf exhibit remarkable resilience to elevated temperatures compared to their counterparts in other reef systems. To understand the thermal tolerance in Persian Gulf corals and their molecular responses to extreme warm temperatures, Acropora downingi specimens collected from Larak Island were subjected to a heat shock of 34 ± 1 °C. We evaluated coral coloration, bleaching, and mRNA expression of biomarkers related to heat shock proteins (HSPs) such as Hsp70 and Hsp90, oxidative stress markers like Catalase and manganese superoxide dismutase (Cat and Mn-Sod), anti-apoptotic factors exemplified by B-cell lymphoma 2 (Bcl-2), and calcification-related genes including galaxin (Gal) after 24 h and 48 h of thermal shock exposure. Exposure of A. downingi to a 48-h heat shock at 34 °C resulted in noticeable fading of coral coloration compared to the control group. Despite this, the corals demonstrated resilience and did not undergo complete bleaching. Our findings also revealed significant increase of Hsp70, Hsp90, Cat, Mn-Sod, Bcl-2, and Gal mRNA expression after 24 h of thermal stress. However, after 48 h, transcripts for Hsp90, Cat, and Gal were observed to be decreased. These results suggest the pivotal roles played by genes involved in HSP signaling pathways, oxidative stress responses, anti-apoptosis processes, and calcification processes in the Persian Gulf coral's adaptation to thermal stress and its resistance to bleaching.

Transcriptomic analysis reveals the survival strategies of Mytilus coruscus under short-term rising seawater temperatures

Mytilus coruscus is an ecologically and economically important species in China. However, in recent years, ocean warming has seriously threatened the survival of M. coruscus and the development of its aquaculture industry. In this study, we analyzed the transcriptomes of M. coruscus pediveliger larvae and adults reared under rising seawater temperatures to explore heat adaptation mechanisms. M. coruscus pediveliger larvae were exposed to artificial seawater at 18 °C, 21 °C and 23 °C for 24 h, while adults were exposed to 18 °C, 26 °C and 33 °C for 24 h to simulate high-temperature conditions during low tide. Results showed that the genes associated with antioxidant activity, oxidative phosphorylation, and glycosaminoglycan biosynthesis were gradually up-regulated in response to high temperature in pediveliger larvae, indicating that the regulation of oxidative stress and energy regulation was a primary response to heat stress. HSPs, apoptosis, NF-κB signaling pathway and TNF signaling pathway were significantly up-regulated in M. coruscus adults. Additionally, KEGG analysis revealed significant enrichment in protein processing in endoplasmic reticulum, PI3K-Akt signaling pathway, HIF-1 signaling pathway and NF-κB signaling pathway. Hence, adult M. coruscus coped with heat stress through the regulation of signal transduction and immune responses. Our findings suggest that M. coruscus pediveliger larvae and adults employed different strategies to cope with high-temperature stress, providing preliminary insights into the heat adaptation mechanisms of mussels. This study represents the first step toward a deeper understanding of the complexity of heat adaptation mechanisms in marine bivalves and is instrumental in elucidating the adaptive strategies of marine organisms amid climate change. Furthermore, our findings also lay a foundation for breeding stress-resistant M. coruscus.

High- and low-temperature stress responses of Porites lutea from the relatively high-latitude region of the South China Sea

Global climate change has led to more frequent extreme temperature (extreme heat and cold) events, posing a serious threat to coral reef ecosystems. Higher latitudes are considered potential refuges for reef-building corals, but their response to extreme temperature stress in these regions remain unclear. This study, indoor simulated stress experiments ranging on Porites lutea from Weizhou Island in the northern part of the South China Sea, simulating suitable (26 °C) to extreme high (34 °C) and extreme low (12 °C) temperatures. Physiological, biochemical, and transcriptional responses, were analysed. Results showed P. lutea's tentacles contracted, and symbiotic relationships broke down at both high and low temperatures; leading to oxidative stress, and a higher risk of disease. The coral host's response to temperature stress was positively regulated, mainly through apoptosis and metabolic inhibition pathways, whereas Symbiodiniaceae C15 showed no significant response to either high- or low-temperature stress. The coral host played a dominant role in the holobiont's stress response, using similar mechanisms for both high- and low-temperatures with some differences in the details. This study enhances understanding the temperature response mechanisms of the dominant coral species, P. lutea in the relatively high-latitude regions of the South China Sea.

Phosphorus limitation intensifies heat-stress effects on the potential mutualistic capacity in the coral-derived Symbiodinium

Coral reef ecosystems have been severely ravaged by global warming and eutrophication. Eutrophication often originates from nitrogen (N) overloading that creates stoichiometric phosphorus (P) limitation, which can be aggravated by sea surface temperature rises that enhances stratification. However, how P-limitation interacts with thermal stress to impact coral-Symbiodiniaceae mutualism is poorly understood and underexplored. Here, we investigated the effect of P-limitation (P-depleted vs. P-replete) superimposed on heat stress (31 °C vs. 25 °C) on a Symbiodinium strain newly isolated from the coral host by a 14-day incubation experiment. The heat and P-limitation co-stress induced an increase in alkaline phosphatase activity and reppressed cell division, photosynthetic efficiency, and expression of N uptake and assimilation genes. Moreover, P limitation intensified downregulation of carbon fixation (light and dark reaction) and metabolism (glycolysis) pathways in heat stressed Symbiodinium. Notably, co-stress elicited a marked transcriptional downregulation of genes encoding photosynthates transporters and microbe-associated molecular patterns, potentially undermining the mutualism potential. This work sheds light on the interactive effects of P-limitation and heat stress on coral symbionts, indicating that nutrient imbalance in the coral reef ecosystem can intensify heat-stress effects on the mutualistic capacity of Symbiodiniaceae.

Multiomics data integration, limitations, and prospects to reveal the metabolic activity of the coral holobiont

Since their radiation in the Middle Triassic period ∼240 million years ago, stony corals have survived past climate fluctuations and five mass extinctions. Their long-term survival underscores the inherent resilience of corals, particularly when considering the nutrient-poor marine environments in which they have thrived. However, coral bleaching has emerged as a global threat to coral survival, requiring rapid advancements in coral research to understand holobiont stress responses and allow for interventions before extensive bleaching occurs. This review encompasses the potential, as well as the limits, of multiomics data applications when applied to the coral holobiont. Synopses for how different omics tools have been applied to date and their current restrictions are discussed, in addition to ways these restrictions may be overcome, such as recruiting new technology to studies, utilizing novel bioinformatics approaches, and generally integrating omics data. Lastly, this review presents considerations for the design of holobiont multiomics studies to support lab-to-field advancements of coral stress marker monitoring systems. Although much of the bleaching mechanism has eluded investigation to date, multiomic studies have already produced key findings regarding the holobiont's stress response, and have the potential to advance the field further.

Comparison of physiological and transcriptome responses of corals to strong light and high temperature

Coral reefs are essential for marine ecology and biodiversity. Global climate change has resulted in severe coral reef degradation, partly via coral bleaching, which is caused by rising sea temperatures and solar light intensity. In this study, we examined the impact of strong light (300 µmol.m-2.s-1) and high temperature (33°C) on the growth, immunity, and gene expression of Galaxea fascicularis. Strong light caused coral bleaching in the absence of high sea temperatures, while no obvious bleaching was observed under high temperature alone. The effect of strong light on calcification rate of G. fascicularis is significantly weaker than that of high temperature. Both strong light and high temperatures significantly affected the immune enzyme activity of G. fascicularis symbionts, with the former having a strong effect on their photosystem. Temperature affected the digestive system, replication and repair, and cell growth and death of coral hosts, as indicated by transcriptomics analysis. These results provide a valuable for strategies to mitigate coral bleaching. TEASER: We explored the effects of strong light exposure and high temperature on coral reefs and their symbiont algae.

Deciphering temporal gene expression dynamics in multiple coral species exposed to heat stress: Implications for predicting resilience

Coral reefs are facing unprecedented threats due to global climate change, particularly elevated sea surface temperatures causing coral bleaching. Understanding coral responses at the molecular level is crucial for predicting their resilience and developing effective conservation strategies. In this study, we conducted a comprehensive gene expression analysis of four coral species to investigate their long-term molecular response to heat stress. We identified distinct gene expression patterns among the coral species, with laminar corals exhibiting a stronger response compared to branching corals. Heat shock proteins (HSPs) showed an overall decreasing expression trend, indicating the high energy cost associated with sustaining elevated HSP levels during prolonged heat stress. Peroxidases and oxidoreductases involved in oxidative stress response demonstrated significant upregulation, highlighting their role in maintaining cellular redox balance. Differential expression of genes related to calcium homeostasis and bioluminescence suggested distinct mechanisms for coping with heat stress among the coral species. Furthermore, the impact of heat stress on coral biomineralization varied, with downregulation of carbonic anhydrase and skeletal organic matrix proteins indicating reduced capacity for biomineralization in the later stages of heat stress. Our findings provide insights into the molecular mechanisms underlying coral responses to heat stress and highlight the importance of considering species-specific responses in assessing coral resilience. The identified biomarkers may serve as indicators of heat stress and contribute to early detection of coral bleaching events. These findings contribute to our understanding of coral resilience and provide a basis for future research aimed at enhancing coral survival in the face of climate change.

Reconciling the variability in the biological response of marine invertebrates to climate change

As climate change increases the rate of environmental change and the frequency and intensity of disturbance events, selective forces intensify. However, given the complicated interplay between plasticity and selection for ecological - and thus evolutionary - outcomes, understanding the proximate signals, molecular mechanisms and the role of environmental history becomes increasingly critical for eco-evolutionary forecasting. To enhance the accuracy of our forecasting, we must characterize environmental signals at a level of resolution that is relevant to the organism, such as the microhabitat it inhabits and its intracellular conditions, while also quantifying the biological responses to these signals in the appropriate cells and tissues. In this Commentary, we provide historical context to some of the long-standing challenges in global change biology that constrain our capacity for eco-evolutionary forecasting using reef-building corals as a focal model. We then describe examples of mismatches between the scales of external signals relative to the sensors and signal transduction cascades that initiate and maintain cellular responses. Studying cellular responses at this scale is crucial because these responses are the basis of acclimation to changing environmental conditions and the potential for environmental 'memory' of prior or historical conditions through molecular mechanisms. To challenge the field, we outline some unresolved questions and suggest approaches to align experimental work with an organism's perception of the environment; these aspects are discussed with respect to human interventions.