Early Changes in Nitrate Uptake and Assimilation Under Drought in Relation to Transpiration

Role of Microbes in Alleviating Crop Drought Stress: A Review

Drought stress is an annual global phenomenon that has devastating effects on crop production, so numerous studies have been conducted to improve crop drought resistance. Plant-associated microbiota play a crucial role in crop health and growth; however, we have a limited understanding of the key processes involved in microbiome-induced crop adaptation to drought stress. In this review, we summarize the adverse effects of drought stress on crop growth in terms of germination, photosynthesis, nutrient uptake, biomass, and yield, with a focus on the response of soil microbial communities to drought stress and plant-microbe interactions under drought stress. Moreover, we review the morpho-physiological, biochemical, and molecular mechanisms underlying the mitigation effect of microbes on crop drought stress. Finally, we highlight future research directions, including the characterization of specific rhizosphere microbiome species with corresponding root exudates and the efficiency of rhizobacteria inoculants under drought conditions. Such research will advance our understanding of the complex interactions between crops and microbes and improve crop resistance to drought stress through the application of beneficial drought-adaptive microbes.

Comparative physiological and transcriptome analysis of leaf nitrogen fluxes in stay-green maize during the vegetative stage

In maize, nitrogen (N) stored in leaves is an important internal source for supporting subsequent growth and development. However, the regulation of N fluxes and photosynthesis and the molecular and genotypic regulations that modify them are less clear in source leaves during the vegetative stage. This knowledge is crucial for improving N use efficiency (NUE). By using 15N labeling and transcriptome methods, an analysis of the physiological and molecular basis of leaf N import and export processes and photosynthetic N use efficiency (PNUE) was conducted in two maize hybrids (XY335 and XY696) with different stay-green characteristics during the vegetative stage. Leaf N import and export in XY696 were 45% and 33% greater than those in XY335. However, the PNUE in XY335 was 17% greater than that in XY696 due to the higher net photosynthetic rate (A) and lower SLN. Correspondingly, the chlorophyll content and photosynthesis-related enzyme (PEPc, PEPck, PPDK) activities increased by 18∼30% in XY335. Transcriptome analysis indicated that the expression levels of several N and carbon metabolism-related genes encoding Rubisco, PEPc, Nir, GS and AS were significantly increased or decreased in XY696 in parallel with enzyme activities. Moreover, there was a large difference in the expression abundance of genes encoding nitrate/nitrite transporters and transmembrane proteins. Our results suggest that two hybrids modulate leaf N fluxes and photosynthesis differently by altering gene expression and enzyme activities. Our study contributes to understanding leaf N fluxes and PNUE regulation and serves as a crucial reference for NUE improvement in maize breeding research.

Effects of low nitrogen supply on biochemical and physiological parameters related to nitrate and water, involving nitrate transporters and aquaporins in Citrus macrophylla

A reduction in chemical N-based fertillizer was investigated in Citrus plants. As N and water uptake are connected, the relationship between the physiological response to reductions in N was studied in relation to N metabolism and water. We examined the response of new and mature leaves and roots of Citrus macrophylla, grown under controlled conditions, and given different concentrations of N: 16, 8 or 4 mM. Differences in growth and development were determined for biochemical (mineral content, photosynthetic pigments, proteins and nitrate and nitrite reductase activity), physiological (photosynthesis and transpiration), and molecular (relative expression of nitrate transporters and aquaporins) parameters. Only plants given 4 mM N showed a reduction in growth. Although there were changes in NR activity, protein synthesis, and chlorophyll content in both 8 and 4 mM N plants that were highly related to aquaporin and nitrate transporter expression. The results revealed new findings on the relationship between aquaporins and nitrate transporters in new leaves of Citrus, suggesting a mechanism for ensuring growth under low N when new tissues are being formed.

Genetic regulation of nitrogen use efficiency in Gossypium spp

Cotton (Gossypium spp.) is the most important fibre crop, with desirable characteristics preferred for textile production. Cotton fibre output relies heavily on nitrate as the most important source of inorganic nitrogen (N). However, nitrogen dynamics in extreme environments limit plant growth and lead to yield loss and pollution. Therefore, nitrogen use efficiency (NUE), which involves the utilisation of the 'right rate', 'right source', 'right time', and 'right place' (4Rs), is key for efficient N management. Recent omics techniques have genetically improved NUE in crops. We herein highlight the mechanisms of N uptake and assimilation in the vegetative and reproductive branches of the cotton plant while considering the known and unknown regulatory factors. The phylogenetic relationships among N transporters in four Gossypium spp. have been reviewed. Further, the N regulatory genes that participate in xylem transport and phloem loading are also discussed. In addition, the functions of microRNAs and transcription factors in modulating the expression of target N regulatory genes are highlighted. Overall, this review provides a detailed perspective on the complex N regulatory mechanism in cotton, which would accelerate the research toward improving NUE in crops.

Impacts of Deficit Irrigation on Photosynthetic Performance, Productivity and Nutritional Quality of Aeroponically Grown Tuscan Kale (Brassica oleracea L.) in a Tropical Greenhouse

Tuscan kale was grown aeroponically with 5, 30 and 60 min nutrient spraying intervals (defined as 5 minNSIs, 30 minNSIs and 60 minNSIs). Four weeks after transplanting, some 5 minNSI plants were transferred to a 60 minNSI (5 minNSI → 60 minNSI) and 90 minNSI (5 minNSI → 90 minNSI) for one more week. Significantly lower light-saturated rates of photosynthesis and stomatal conductance were observed for plants grown with a 60 minNSI than with a 5 minNSI. However, all plants had similar internal CO₂ concentrations and transpiration rates. Reduced light use efficiency but increased energy dissipation was observed in plants grown in a 60 minNSI. A higher nitrate concentration was observed in 60 minNSI plants compared to 5 minNSI and 30 minNSI plants, while all plants had similar concentrations of total reduced nitrogen, leaf soluble protein and Rubisco protein. Plants grown with prolonged NSIs (deficit irrigation) had lower biomass accumulation due to the inhibition of leaf initiation and expansion compared to 5 minNSIs. However, there was no substantial yield penalty in 5 minNSI → 60 minNSI plants. Enhancements in nutritional quality through deficit irrigation at pre-harvest were measured by proline and total soluble sugar. In conclusion, it is better to grow Tuscan kale with a 5 minNSI for four weeks followed by one week with a 60 minNSI before harvest to reduce water usage, yield penalty and enhance nutritional quality.

Nitric Oxide Metabolic Pathway in Drought-Stressed Nodules of Faba Bean (Vicia faba L.)

Drought is an environmental stress that strongly impacts plants. It affects all stages of growth and induces profound disturbances that influence all cellular functions. Legumes can establish a symbiosis with Rhizobium-type bacteria, whose function is to fix atmospheric nitrogen in organs called nodules and to meet plant nitrogen needs. Symbiotic nitrogen fixation (SNF) is particularly sensitive to drought. We raised the hypothesis that, in drought-stressed nodules, SNF inhibition is partly correlated to hypoxia resulting from nodule structure compaction and an increased O2 diffusion barrier, and that the nodule energy regeneration involves phytoglobin-nitric oxide (Pgb-NO) respiration. To test this hypothesis, we subjected faba bean (Vicia faba L.) plants nodulated with a Rhizobium laguerreae strain to either drought or osmotic stress. We monitored the N2-fixation activity, the energy state (ATP/ADP ratio), the expression of hypoxia marker genes (alcohol dehydrogenase and alanine aminotransferase), and the functioning of the Pgb-NO respiration in the nodules. The collected data confirmed our hypothesis and showed that (1) drought-stressed nodules were subject to more intense hypoxia than control nodules and (2) NO production increased and contributed via Pgb-NO respiration to the maintenance of the energy state of drought-stressed nodules.

Exogenous naphthaleneacetic acid alleviated alkalinity-induced morpho-physio-biochemical damages in Cyperus esculentus L. var. sativus Boeck

Cyperus esculentus L. var. sativus Boeck (commonly called Chufa) is a perennial species that produces nutritious underground tubers and contributes to the diet and health of human worldwide. However, it is salt-sensitive and its adaptation to salinity stress remains an enigma. Naphthaleneacetic acid (NAA) plays a vital role in regulating plant salt stress tolerance. Thus, we aimed to investigate the impact of NAA (150 mg/L) application on growth and physio-biochemical response mechanisms of Chufa plants to different levels of salinity stress (0-, 90-, and 180 mM of alkaline stress ([1:1 ratio of Na₂CO₃ and NaHCO₃]). In response to increasing stress levels, shoot-root growth decreased, whereas malondialdehyde (MDA), hydrogen peroxide (H₂O₂), osmolytes (soluble protein, proline, and soluble sugars), and activities of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) significantly increased. Alkalinity led to significant increase in Na⁺ and Cl^-, but decrease in Mg²⁺ concentration in both roots and leaves; however, K⁺ decreased significantly in leaves under both stresses. Additionally, NO 3 - and. levels, nitrate reductase (NR) activities, and glutamate synthase (GOGAT) decreased significantly. However, glutamine synthetase (GS) increased non-significantly at 90 mM but declined at 180 mM. Foliar NAA application reduced Na⁺ and Cl^-, MDA, and H₂O₂ but increased photosynthetic pigments, K⁺ and Mg²⁺, osmolytes, nitrogen (N) metabolism, and upregulating the enzymatic antioxidant system to reduce oxidative stress under alkaline conditions. Hence, our findings manifest that NAA application is an effective strategy that can be utilized to enhance tolerance of chufa plants to alkaline stress. Future studies should explore whether NAA can positively alter the nutrient composition of chufa tubers at deeper molecular levels, which might offer solutions to nutritious problems in developing countries.

Nitrate Uptake and Use Efficiency: Pros and Cons of Chloride Interference in the Vegetable Crops

Over the past five decades, nitrogen (N) fertilization has been an essential tool for boosting crop productivity in agricultural systems. To avoid N pollution while preserving the crop yields and profit margins for farmers, the scientific community is searching for eco-sustainable strategies aimed at increasing plants' nitrogen use efficiency (NUE). The present article provides a refined definition of the NUE based on the two important physiological factors (N-uptake and N-utilization efficiency). The diverse molecular and physiological mechanisms underlying the processes of N assimilation, translocation, transport, accumulation, and reallocation are revisited and critically discussed. The review concludes by examining the N uptake and NUE in tandem with chloride stress and eustress, the latter being a new approach toward enhancing productivity and functional quality of the horticultural crops, particularly facilitated by soilless cultivation.

Long-term manipulation of mean climatic conditions alters drought effects on C- and N-cycling in an arable soil

Climate is changing and predicted future scenarios include both changes in long-term mean climatic conditions and intensification of extreme events such as drought. Drought can have a major impact on soil functional processes; soil microorganisms, key to these processes, depend on water and temperature dynamics. Consequently, feedback mechanisms regarding microbially mediated carbon and nitrogen cycling in soils may be affected. There are indications that microbial exposure to increasingly unfavorable environmental conditions influences their stress responses. Here, the long-term field experiment Hohenheim Climate Change (HoCC) provided a research platform to explore how microbial exposure to long-term reduced water availability and soil warming modifies microbially driven soil processes, especially gas fluxes from soil, both during drought and after rewetting. The HoCC experiment is an agroecosystem in which the soil microbiome has been exposed to reduced annual mean precipitation and elevated temperature since 2008. Treatment levels were chosen based on a realistic future climate scenario. In June 2019, we exposed this system to a drought period of four weeks. We found that even after 11 years, warming remained a driver of CO₂ and N₂ O fluxes across the different soil moisture conditions in our drought experiment. Importantly, however, microbial exposure to long-term reduced water availability limited the stimulatory effect of warming on gas fluxes during drought and after rewetting. Our results were neither related to a legacy effect within overall microbial biomass carbon levels nor a shift towards enhanced fungal abundance. We found no indications that extracellular enzyme activities or microbial substrate availability explained the gas flux dynamics observed in our drought experiment. Our study indicates that soil warming promotes gaseous C and N loss even under extreme drought conditions. We suspect, however, that a shift in microbial function following long-term water limitation can hamper the enhancing effect of warming on soil gas fluxes.

Inorganic Nitrogen Transport and Assimilation in Pea (Pisum sativum)

The genome sequences of several legume species are now available allowing the comparison of the nitrogen (N) transporter inventories with non-legume species. A survey of the genes encoding inorganic N transporters and the sensing and assimilatory families in pea, revealed similar numbers of genes encoding the primary N assimilatory enzymes to those in other types of plants. Interestingly, we find that pea and Medicago truncatula have fewer members of the NRT2 nitrate transporter family. We suggest that this difference may result from a decreased dependency on soil nitrate acquisition, as legumes have the capacity to derive N from a symbiotic relationship with diazotrophs. Comparison with M. truncatula, indicates that only one of three NRT2s in pea is likely to be functional, possibly indicating less N uptake before nodule formation and N-fixation starts. Pea seeds are large, containing generous amounts of N-rich storage proteins providing a reserve that helps seedling establishment and this may also explain why fewer high affinity nitrate transporters are required. The capacity for nitrate accumulation in the vacuole is another component of assimilation, as it can provide a storage reservoir that supplies the plant when soil N is depleted. Comparing published pea tissue nitrate concentrations with other plants, we find that there is less accumulation of nitrate, even in non-nodulated plants, and that suggests a lower capacity for vacuolar storage. The long-distance transported form of organic N in the phloem is known to be specialized in legumes, with increased amounts of organic N molecules transported, like ureides, allantoin, asparagine and amides in pea. We suggest that, in general, the lower tissue and phloem nitrate levels compared with non-legumes may also result in less requirement for high affinity nitrate transporters. The pattern of N transporter and assimilatory enzyme distribution in pea is discussed and compared with non-legumes with the aim of identifying future breeding targets.

The Lotus japonicus NPF3.1 Is a Nodule-Induced Gene That Plays a Positive Role in Nodule Functioning

Nitrogen-fixing nodules are new organs formed on legume roots as a result of the beneficial interaction with the soil bacteria, rhizobia. Proteins of the nitrate transporter 1/peptide transporter family (NPF) are largely represented in the subcategory of nodule-induced transporters identified in mature nodules. The role of nitrate as a signal/nutrient regulating nodule functioning has been recently highlighted in the literature, and NPFs may play a central role in both the permissive and inhibitory pathways controlling N₂-fixation efficiency. In this study, we present the characterization of the Lotus japonicus LjNPF3.1 gene. LjNPF3.1 is upregulated in mature nodules. Promoter studies show transcriptional activation confined to the cortical region of both roots and nodules. Under symbiotic conditions, Ljnpf3.1-knockout mutant's display reduced shoot development and anthocyanin accumulation as a result of nutrient deprivation. Altogether, LjNPF3.1 plays a role in maximizing the beneficial outcome of the root nodule symbiosis.