Perennial grass root system specializes for multiple resource acquisitions with differential elongation and branching patterns

Synergistic effects of combined application of biochar and arbuscular mycorrhizal fungi on the safe production of rice in cadmium contaminated soil

Arbuscular mycorrhizal fungi (AMF) have been shown to effectively mitigate the detrimental effects of heavy metal stress on their plant hosts. Nevertheless, the biological activities of AMF were concurrently compromised. Biochar (BC), as an abiotic factor, had the potential compensate for this limitation. To elucidate the synergistic effects of biotic and abiotic factors, a pot experiment was conducted to assess the impact of biochar and AMF on the growth, physiological traits, and genetic expression in rice plants subjected to Cd stress. The results demonstrated that biochar significantly increased the mycorrhizal colonization rate by 22.19 %, while the combined application of biochar and AMF led to a remarkable enhancement of rice root biomass by 42.2 %. This resulted in a shift in spatial growth patterns that preferentially promoted enhanced underground development. Biochar effectively mitigated the stomatal limitations imposed by Cd on photosynthetic processes. The decrease in IBRv2 (Integrated Biomarker Response version 2) values suggested that the antioxidant system was experiencing a state of remission. An increase of Cd content within the rice root systems was observed, ranging from 33.71 % to 48.71 %, accompanied by a reduction in Cd bioavailability and mobility curtailed its translocation to the aboveground tissues. Under conditions of low soil Cd concentration (Cd ≤ 1 mg·kg-1), the Cd content in rice seeds from the group subjected to the combined treatment remained below the national standard (Cd ≤ 0.2 mg·kg-1). Furthermore, the combined treatment modulated the uptake of Fe and Zn by rice, while simultaneously suppressing the expression of genes associated with Cd transport. Collectively, the integration of biological and abiotic factors provided a novel perspective and methodological framework for safe in-situ utilization of soils with low Cd contamination.

Bridging Time-series Image Phenotyping and Functional-Structural Plant Modeling to Predict Adventitious Root System Architecture

Root system architecture (RSA) is an important measure of how plants navigate and interact with the soil environment. However, current methods in studying RSA must make tradeoffs between precision of data and proximity to natural conditions, with root growth in germination papers providing accessibility and high data resolution. Functional-structural plant models (FSPMs) can overcome this tradeoff, though parameterization and evaluation of FSPMs are traditionally based in manual measurements and visual comparison. Here, we applied a germination paper system to study the adventitious RSA and root phenology of Populus trichocarpa stem cuttings using time-series image-based phenotyping augmented by FSPM. We found a significant correlation between timing of root initiation and thermal time at cutting collection (P value = 0.0061, R2 = 0.875), but little correlation with RSA. We also present a use of RhizoVision [1] for automatically extracting FSPM parameters from time series images and evaluating FSPM simulations. A high accuracy of the parameterization was achieved in predicting 2D growth with a sensitivity rate of 83.5%. This accuracy was lost when predicting 3D growth with sensitivity rates of 38.5% to 48.7%, while overall accuracy varied with phenotyping methods. Despite this loss in accuracy, the new method is amenable to high throughput FSPM parameterization and bridges the gap between advances in time-series phenotyping and FSPMs.

The soil pore structure encountered by roots affects plant-derived carbon inputs and fate

Plant roots are the main supplier of carbon (C) to the soil, the largest terrestrial C reservoir. Soil pore structure drives root growth, yet how it affects belowground C inputs remains a critical knowledge gap. By combining X-ray computed tomography with 14 C plant labelling, we identified root-soil contact as a previously unrecognised influence on belowground plant C allocations and on the fate of plant-derived C in the soil. Greater contact with the surrounding soil, when the growing root encounters a pore structure dominated by small (< 40 μm Ø) pores, results in strong rhizodeposition but in areas of high microbial activity. The root system of Rudbeckia hirta revealed high plasticity and thus maintained high root-soil contact. This led to greater C inputs across a wide range of soil pore structures. The root-soil contact Panicum virgatum, a promising bioenergy feedstock crop, was sensitive to the encountered structure. Pore structure built by a polyculture, for example, restored prairie, can be particularly effective in promoting lateral root growth and thus root-soil contact and associated C benefits. The findings suggest that the interaction of pore structure with roots is an important, previously unrecognised, stimulus of soil C gains.