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Yang L, Fang S, Liu L, Zhao L, Chen W, Li X, Xu Z, Chen S, Wang H, Yu D. WRKY transcription factors: Hubs for regulating plant growth and stress responses. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2025; 67:488-509. [PMID: 39815727 DOI: 10.1111/jipb.13828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2024] [Accepted: 11/21/2024] [Indexed: 01/18/2025]
Abstract
As sessile organisms, plants must directly face various stressors. Therefore, plants have evolved a powerful stress resistance system and can adjust their growth and development strategies appropriately in different stressful environments to adapt to complex and ever-changing conditions. Nevertheless, prioritizing defensive responses can hinder growth; this is a crucial factor for plant survival but is detrimental to crop production. As such, comprehending the impact of adverse environments on plant growth is not only a fundamental scientific inquiry but also imperative for the agricultural industry and for food security. The traditional view that plant growth is hindered during defense due to resource allocation trade-offs is challenged by evidence that plants exhibit both robust growth and defensive capabilities through human intervention. These findings suggest that the growth‒defense trade-off is not only dictated by resource limitations but also influenced by intricate transcriptional regulatory mechanisms. Hence, it is imperative to conduct thorough investigations on the central genes that govern plant resistance and growth in unfavorable environments. Recent studies have consistently highlighted the importance of WRKY transcription factors in orchestrating stress responses and plant-specific growth and development, underscoring the pivotal role of WRKYs in modulating plant growth under stressful conditions. Here, we review recent advances in understanding the dual roles of WRKYs in the regulation of plant stress resistance and growth across diverse stress environments. This information will be crucial for elucidating the intricate interplay between plant stress response and growth and may aid in identifying gene loci that could be utilized in future breeding programs to develop crops with enhanced stress resistance and productivity.
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Affiliation(s)
- Lu Yang
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- School of Ecology and Environmental Science, Yunnan University, Kunming, 650500, China
| | - Siyu Fang
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- School of Ecology and Environmental Science, Yunnan University, Kunming, 650500, China
| | - Lei Liu
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
| | - Lirong Zhao
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
| | - Wanqin Chen
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- School of Ecology and Environmental Science, Yunnan University, Kunming, 650500, China
| | - Xia Li
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- Southwest United Graduate School, Kunming, 650092, China
| | - Zhiyu Xu
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- School of Ecology and Environmental Science, Yunnan University, Kunming, 650500, China
| | - Shidie Chen
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- Southwest United Graduate School, Kunming, 650092, China
| | - Houping Wang
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- School of Ecology and Environmental Science, Yunnan University, Kunming, 650500, China
| | - Diqiu Yu
- State Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, School of Life Sciences, Yunnan University, Kunming, 650500, China
- Southwest United Graduate School, Kunming, 650092, China
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Chen F, Chen L, Yan Z, Xu J, Feng L, He N, Guo M, Zhao J, Chen Z, Chen H, Yao G, Liu C. Recent advances of CRISPR-based genome editing for enhancing staple crops. FRONTIERS IN PLANT SCIENCE 2024; 15:1478398. [PMID: 39376239 PMCID: PMC11456538 DOI: 10.3389/fpls.2024.1478398] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/09/2024] [Accepted: 09/03/2024] [Indexed: 10/09/2024]
Abstract
An increasing population, climate change, and diminishing natural resources present severe threats to global food security, with traditional breeding and genetic engineering methods often falling short in addressing these rapidly evolving challenges. CRISPR/Cas systems have emerged as revolutionary tools for precise genetic modifications in crops, offering significant advancements in resilience, yield, and nutritional value, particularly in staple crops like rice and maize. This review highlights the transformative potential of CRISPR/Cas technology, emphasizing recent innovations such as prime and base editing, and the development of novel CRISPR-associated proteins, which have significantly improved the specificity, efficiency, and scope of genome editing in agriculture. These advancements enable targeted genetic modifications that enhance tolerance to abiotic stresses as well as biotic stresses. Additionally, CRISPR/Cas plays a crucial role in improving crop yield and quality by enhancing photosynthetic efficiency, nutrient uptake, and resistance to lodging, while also improving taste, texture, shelf life, and nutritional content through biofortification. Despite challenges such as off-target effects, the need for more efficient delivery methods, and ethical and regulatory concerns, the review underscores the importance of CRISPR/Cas in addressing global food security and sustainability challenges. It calls for continued research and integration of CRISPR with other emerging technologies like nanotechnology, synthetic biology, and machine learning to fully realize its potential in developing resilient, productive, and sustainable agricultural systems.
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Affiliation(s)
- Feng Chen
- School of Biology and Food Engineering, Changshu Institute of Technology, Changshu, Suzhou, Jiangsu, China
| | - Lu Chen
- Pharma Technology A/S, Køge, Denmark
| | - Zhao Yan
- School of Biology and Food Engineering, Changshu Institute of Technology, Changshu, Suzhou, Jiangsu, China
| | - Jingyuan Xu
- School of Biology and Food Engineering, Changshu Institute of Technology, Changshu, Suzhou, Jiangsu, China
| | - Luoluo Feng
- School of Biology and Food Engineering, Changshu Institute of Technology, Changshu, Suzhou, Jiangsu, China
| | - Na He
- School of Biology and Food Engineering, Changshu Institute of Technology, Changshu, Suzhou, Jiangsu, China
| | - Mingli Guo
- State Key Laboratory of Dampness Syndrome of Chinese Medicine, The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China
| | - Jiaxiong Zhao
- State Key Laboratory of Dampness Syndrome of Chinese Medicine, The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China
- Second Clinical Medical College, Guangzhou University of Chinese Medicine, Guangzhou, China
| | - Zhijun Chen
- State Key Laboratory of Dampness Syndrome of Chinese Medicine, The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China
- Second Clinical Medical College, Guangzhou University of Chinese Medicine, Guangzhou, China
| | - Huiqi Chen
- State Key Laboratory of Dampness Syndrome of Chinese Medicine, The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China
- Second Clinical Medical College, Guangzhou University of Chinese Medicine, Guangzhou, China
| | - Gengzhen Yao
- State Key Laboratory of Dampness Syndrome of Chinese Medicine, The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China
| | - Chunping Liu
- State Key Laboratory of Dampness Syndrome of Chinese Medicine, The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China
- Guangdong-Hong Kong-Macau Joint Lab on Chinese Medicine and Immune Disease Research, Guangzhou, Guangdong, China
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Yu B, Geng M, Xue Y, Yu Q, Lu B, Liu M, Shao Y, Li C, Xu J, Li J, Hu W, Tang H, Li P, Liu Q, Jing S. Combined miRNA and mRNA sequencing reveals the defensive strategies of resistant YHY15 rice against differentially virulent brown planthoppers. FRONTIERS IN PLANT SCIENCE 2024; 15:1366515. [PMID: 38562566 PMCID: PMC10982320 DOI: 10.3389/fpls.2024.1366515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Accepted: 02/26/2024] [Indexed: 04/04/2024]
Abstract
Introduction The brown planthopper (BPH) poses a significant threat to rice production in Asia. The use of resistant rice varieties has been effective in managing this pest. However, the adaptability of BPH to resistant rice varieties has led to the emergence of virulent populations, such as biotype Y BPH. YHY15 rice, which carries the BPH resistance gene Bph15, exhibits notable resistance to biotype 1 BPH but is susceptible to biotype Y BPH. Limited information exists regarding how resistant rice plants defend against BPH populations with varying levels of virulence. Methods In this study, we integrated miRNA and mRNA expression profiling analyses to study the differential responses of YHY15 rice to both avirulent (biotype 1) and virulent (biotype Y) BPH. Results YHY15 rice demonstrated a rapid response to biotype Y BPH infestation, with significant transcriptional changes occurring within 6 hours. The biotype Y-responsive genes were notably enriched in photosynthetic processes. Accordingly, biotype Y BPH infestation induced more intense transcriptional responses, affecting miRNA expression, defenserelated metabolic pathways, phytohormone signaling, and multiple transcription factors. Additionally, callose deposition was enhanced in biotype Y BPH-infested rice seedlings. Discussion These findings provide comprehensive insights into the defense mechanisms of resistant rice plants against virulent BPH, and may potentially guide the development of insect-resistant rice varieties.
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Affiliation(s)
- Bin Yu
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Mengjia Geng
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Yu Xue
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Qingqing Yu
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Bojie Lu
- Hubei Provincial Key Laboratory for Protection and Application of Special Plant Germplasm in Wuling Area of China, College of Life Sciences, South-Central Minzu University, Wuhan, China
| | - Miao Liu
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Yuhan Shao
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Chenxi Li
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Jingang Xu
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Jintao Li
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Wei Hu
- Guangdong Provincial Key Laboratory of New Technology in Rice Breeding, Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Hengmin Tang
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Peng Li
- College of Life Sciences, Xinyang Normal University, Xinyang, China
| | - Qingsong Liu
- College of Life Sciences, Xinyang Normal University, Xinyang, China
- State Key Laboratory of Cotton Bio-breeding and Integrated Utilization, State Key Laboratory of Crop Stress Adaptation and Improvement, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Shengli Jing
- College of Life Sciences, Xinyang Normal University, Xinyang, China
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