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Stanley TR, Guisbert KSK, Perez SM, Oneka M, Kernin I, Higgins NR, Lobo A, Subasi MM, Carroll DJ, Turingan RG, Guisbert E. Stress response gene family expansions correlate with invasive potential in teleost fish. J Exp Biol 2022; 225:274389. [PMID: 35258619 PMCID: PMC8987736 DOI: 10.1242/jeb.243263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Accepted: 01/24/2022] [Indexed: 11/20/2022]
Abstract
The bluegill sunfish Lepomis macrochirus and the closely related redear sunfish Lepomis microlophus have important ecological and recreational value and are widely used for research and aquaculture. While both species have been introduced outside of their native ranges, only the bluegill is considered invasive. Here, we report de novo transcriptome assemblies for these fish as a resource for sunfish biology. Comparative analyses of the transcriptomes revealed an unexpected, bluegill-specific expansion in the HSP70 and HSP90 molecular chaperone gene families. These expansions were not unique to the bluegill as expansions in HSP70s and HSP90s were identified in the genomes of other teleost fish using the NCBI RefSeq database. To determine whether gene family expansions are specific for thermal stress responses, GST and SOD gene families that are associated with oxidative stress responses were also analyzed. Species-specific expansions were also observed for these gene families in distinct fish species. Validating our approach, previously described expansions in the MHC gene family were also identified. Intriguingly, the number of HSP70 paralogs was positively correlated with thermotolerance range for each species, suggesting that these expansions can impact organismal physiology. Furthermore, fish that are considered invasive contained a higher average number of HSP70 paralogs than non-invasive fish. Invasive fish also had higher average numbers of HSP90, MHC and GST paralogs, but not SOD paralogs. Taken together, we propose that expansions in key cellular stress response gene families represent novel genetic signatures that correlate with invasive potential.
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Affiliation(s)
- Taylor R Stanley
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Karen S Kim Guisbert
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Sabrina M Perez
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Morgan Oneka
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Isabela Kernin
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Nicole R Higgins
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Alexandra Lobo
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Munevver M Subasi
- Department of Mathematical Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - David J Carroll
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Ralph G Turingan
- Department of Ocean Engineering and Marine Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
| | - Eric Guisbert
- Department of Biomedical and Chemical Engineering and Sciences, Florida Institute of Technology, Melbourne, FL 32937, USA
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Nunes LT, Barneche DR, Lastrucci NS, Fraga AA, Nunes JACC, Ferreira CEL, Floeter SR. Predicting the effects of body size, temperature and diet on animal feeding rates. Funct Ecol 2021. [DOI: 10.1111/1365-2435.13872] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Lucas T. Nunes
- Marine Macroecology and Biogeography Lab Departamento de Ecologia e Zoologia Universidade Federal de Santa Catarina Florianópolis Santa Catarina Brazil
| | - Diego R. Barneche
- Australian Institute of Marine Science Crawley WA Australia
- Oceans InstituteThe University of Western Australia Crawley WA Australia
| | - Naomi S. Lastrucci
- Marine Macroecology and Biogeography Lab Departamento de Ecologia e Zoologia Universidade Federal de Santa Catarina Florianópolis Santa Catarina Brazil
| | - Alana A. Fraga
- Marine Macroecology and Biogeography Lab Departamento de Ecologia e Zoologia Universidade Federal de Santa Catarina Florianópolis Santa Catarina Brazil
| | - José A. C. C. Nunes
- Laboratório de Ecologia Bentônica Universidade Federal da Bahia Salvador Brazil
| | - Carlos E. L. Ferreira
- Reef Systems Ecology and Conservation Lab Departamento de Biologia Marinha Universidade Federal Fluminense Niterói Rio de Janeiro Brazil
| | - Sergio R. Floeter
- Marine Macroecology and Biogeography Lab Departamento de Ecologia e Zoologia Universidade Federal de Santa Catarina Florianópolis Santa Catarina Brazil
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Schwieterman GD, Crear DP, Anderson BN, Lavoie DR, Sulikowski JA, Bushnell PG, Brill RW. Combined Effects of Acute Temperature Change and Elevated pCO 2 on the Metabolic Rates and Hypoxia Tolerances of Clearnose Skate ( Rostaraja eglanteria), Summer Flounder ( Paralichthys dentatus), and Thorny Skate ( Amblyraja radiata). BIOLOGY 2019; 8:biology8030056. [PMID: 31357558 PMCID: PMC6783964 DOI: 10.3390/biology8030056] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Revised: 07/14/2019] [Accepted: 07/18/2019] [Indexed: 01/02/2023]
Abstract
Understanding how rising temperatures, ocean acidification, and hypoxia affect the performance of coastal fishes is essential to predicting species-specific responses to climate change. Although a population's habitat influences physiological performance, little work has explicitly examined the multi-stressor responses of species from habitats differing in natural variability. Here, clearnose skate (Rostaraja eglanteria) and summer flounder (Paralichthys dentatus) from mid-Atlantic estuaries, and thorny skate (Amblyraja radiata) from the Gulf of Maine, were acutely exposed to current and projected temperatures (20, 24, or 28 °C; 22 or 30 °C; and 9, 13, or 15 °C, respectively) and acidification conditions (pH 7.8 or 7.4). We tested metabolic rates and hypoxia tolerance using intermittent-flow respirometry. All three species exhibited increases in standard metabolic rate under an 8 °C temperature increase (Q10 of 1.71, 1.07, and 2.56, respectively), although this was most pronounced in the thorny skate. At the lowest test temperature and under the low pH treatment, all three species exhibited significant increases in standard metabolic rate (44-105%; p < 0.05) and decreases in hypoxia tolerance (60-84% increases in critical oxygen pressure; p < 0.05). This study demonstrates the interactive effects of increasing temperature and changing ocean carbonate chemistry are species-specific, the implications of which should be considered within the context of habitat.
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Affiliation(s)
- Gail D Schwieterman
- Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, VA 23062, USA.
| | - Daniel P Crear
- Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, VA 23062, USA
| | - Brooke N Anderson
- Marine Sciences Department, University of New England, Biddeford, ME 04005, USA
| | - Danielle R Lavoie
- Department of Biology, Marine Biology, and Environmental Science, Roger Williams University, Bristol, RI 02809, USA
| | - James A Sulikowski
- School of Mathematical & Natural Sciences, Arizona State University, Glendale, AZ 85306, USA
| | - Peter G Bushnell
- Department of Biological Sciences, Indiana University South Bend, South Bend, IN, 46615, USA
| | - Richard W Brill
- Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, VA 23062, USA
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