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Jiang X, Zhang T, Zhang S, Kendrick KM, Liu T. Fundamental functional differences between gyri and sulci: implications for brain function, cognition, and behavior. PSYCHORADIOLOGY 2021; 1:23-41. [PMID: 38665307 PMCID: PMC10939337 DOI: 10.1093/psyrad/kkab002] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 01/24/2021] [Accepted: 02/02/2021] [Indexed: 04/28/2024]
Abstract
Folding of the cerebral cortex is a prominent characteristic of mammalian brains. Alterations or deficits in cortical folding are strongly correlated with abnormal brain function, cognition, and behavior. Therefore, a precise mapping between the anatomy and function of the brain is critical to our understanding of the mechanisms of brain structural architecture in both health and diseases. Gyri and sulci, the standard nomenclature for cortical anatomy, serve as building blocks to make up complex folding patterns, providing a window to decipher cortical anatomy and its relation with brain functions. Huge efforts have been devoted to this research topic from a variety of disciplines including genetics, cell biology, anatomy, neuroimaging, and neurology, as well as involving computational approaches based on machine learning and artificial intelligence algorithms. However, despite increasing progress, our understanding of the functional anatomy of gyro-sulcal patterns is still in its infancy. In this review, we present the current state of this field and provide our perspectives of the methodologies and conclusions concerning functional differentiation between gyri and sulci, as well as the supporting information from genetic, cell biology, and brain structure research. In particular, we will further present a proposed framework for attempting to interpret the dynamic mechanisms of the functional interplay between gyri and sulci. Hopefully, this review will provide a comprehensive summary of anatomo-functional relationships in the cortical gyro-sulcal system together with a consideration of how these contribute to brain function, cognition, and behavior, as well as to mental disorders.
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Affiliation(s)
- Xi Jiang
- School of Life Science and Technology, MOE Key Laboratory for Neuroinformation, University of Electronic Science and Technology of China, Chengdu 611731, China
| | - Tuo Zhang
- School of Automation, Northwestern Polytechnical University, Xi'an 710129, China
| | - Shu Zhang
- Center for Brain and Brain-Inspired Computing Research, School of Computer Science, Northwestern Polytechnical University, Xi'an 710129, China
| | - Keith M Kendrick
- School of Life Science and Technology, MOE Key Laboratory for Neuroinformation, University of Electronic Science and Technology of China, Chengdu 611731, China
| | - Tianming Liu
- Cortical Architecture Imaging and Discovery Laboratory, Department of Computer Science and Bioimaging Research Center, The University of Georgia, Athens, GA 30605, USA
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Guntu RK, Yeditha PK, Rathinasamy M, Perc M, Marwan N, Kurths J, Agarwal A. Wavelet entropy-based evaluation of intrinsic predictability of time series. CHAOS (WOODBURY, N.Y.) 2020; 30:033117. [PMID: 32237775 DOI: 10.1063/1.5145005] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Accepted: 02/17/2020] [Indexed: 06/11/2023]
Abstract
Intrinsic predictability is imperative to quantify inherent information contained in a time series and assists in evaluating the performance of different forecasting methods to get the best possible prediction. Model forecasting performance is the measure of the probability of success. Nevertheless, model performance or the model does not provide understanding for improvement in prediction. Intuitively, intrinsic predictability delivers the highest level of predictability for a time series and informative in unfolding whether the system is unpredictable or the chosen model is a poor choice. We introduce a novel measure, the Wavelet Entropy Energy Measure (WEEM), based on wavelet transformation and information entropy for quantification of intrinsic predictability of time series. To investigate the efficiency and reliability of the proposed measure, model forecast performance was evaluated via a wavelet networks approach. The proposed measure uses the wavelet energy distribution of a time series at different scales and compares it with the wavelet energy distribution of white noise to quantify a time series as deterministic or random. We test the WEEM using a wide variety of time series ranging from deterministic, non-stationary, and ones contaminated with white noise with different noise-signal ratios. Furthermore, a relationship is developed between the WEEM and Nash-Sutcliffe Efficiency, one of the widely known measures of forecast performance. The reliability of WEEM is demonstrated by exploring the relationship to logistic map and real-world data.
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Affiliation(s)
- Ravi Kumar Guntu
- Department of Hydrology, Indian Institute of Technology Roorkee, Roorkee 247667, India
| | - Pavan Kumar Yeditha
- Department of Civil Engineering, MVGR College of Engineering, Vizianagaram 535005, India
| | - Maheswaran Rathinasamy
- Department of Civil Engineering, MVGR College of Engineering, Vizianagaram 535005, India
| | - Matjaž Perc
- Faculty of Natural Sciences and Mathematics, University of Maribor, 2000 Maribor, Slovenia
| | - Norbert Marwan
- Potsdam Institute for Climate Impact Research, Telegrafenberg, 14412 Potsdam, Germany
| | - Jürgen Kurths
- Potsdam Institute for Climate Impact Research, Telegrafenberg, 14412 Potsdam, Germany
| | - Ankit Agarwal
- Department of Hydrology, Indian Institute of Technology Roorkee, Roorkee 247667, India
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Liu H, Zhang S, Jiang X, Zhang T, Huang H, Ge F, Zhao L, Li X, Hu X, Han J, Guo L, Liu T. The Cerebral Cortex is Bisectionally Segregated into Two Fundamentally Different Functional Units of Gyri and Sulci. Cereb Cortex 2019; 29:4238-4252. [PMID: 30541110 PMCID: PMC6735260 DOI: 10.1093/cercor/bhy305] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2018] [Revised: 11/08/2018] [Accepted: 11/12/2018] [Indexed: 01/05/2023] Open
Abstract
The human cerebral cortex is highly folded into diverse gyri and sulci. Accumulating evidences suggest that gyri and sulci exhibit anatomical, morphological, and connectional differences. Inspired by these evidences, we performed a series of experiments to explore the frequency-specific differences between gyral and sulcal neural activities from resting-state and task-based functional magnetic resonance imaging (fMRI) data. Specifically, we designed a convolutional neural network (CNN) based classifier, which can differentiate gyral and sulcal fMRI signals with reasonable accuracies. Further investigations of learned CNN models imply that sulcal fMRI signals are more diverse and more high frequency than gyral signals, suggesting that gyri and sulci truly play different functional roles. These differences are significantly associated with axonal fiber wiring and cortical thickness patterns, suggesting that these differences might be deeply rooted in their structural and cellular underpinnings. Further wavelet entropy analyses demonstrated the validity of CNN-based findings. In general, our collective observations support a new concept that the cerebral cortex is bisectionally segregated into 2 functionally different units of gyri and sulci.
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Affiliation(s)
- Huan Liu
- School of Automation, Northwestern Polytechnical University, Xi’an, China
| | - Shu Zhang
- Cortical Architecture Imaging and Discovery Lab, Department of Computer Science and Bioimaging Research Center, The University of Georgia, Athens, GA, USA
| | - Xi Jiang
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China
| | - Tuo Zhang
- School of Automation, Brain Decoding Research Center, Northwestern Polytechnical University, Xi’an, China
| | - Heng Huang
- School of Automation, Northwestern Polytechnical University, Xi’an, China
| | - Fangfei Ge
- School of Automation, Northwestern Polytechnical University, Xi’an, China
- Cortical Architecture Imaging and Discovery Lab, Department of Computer Science and Bioimaging Research Center, The University of Georgia, Athens, GA, USA
| | - Lin Zhao
- School of Automation, Northwestern Polytechnical University, Xi’an, China
| | - Xiao Li
- School of Automation, Northwestern Polytechnical University, Xi’an, China
| | - Xintao Hu
- School of Automation, Northwestern Polytechnical University, Xi’an, China
| | - Junwei Han
- School of Automation, Northwestern Polytechnical University, Xi’an, China
| | - Lei Guo
- School of Automation, Northwestern Polytechnical University, Xi’an, China
| | - Tianming Liu
- Cortical Architecture Imaging and Discovery Lab, Department of Computer Science and Bioimaging Research Center, The University of Georgia, Athens, GA, USA
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Sun Y, Niu J. Regionalization of Daily Soil Moisture Dynamics Using Wavelet-Based Multiscale Entropy and Principal Component Analysis. ENTROPY 2019; 21:e21060548. [PMID: 33267262 PMCID: PMC7515037 DOI: 10.3390/e21060548] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/21/2019] [Revised: 05/25/2019] [Accepted: 05/28/2019] [Indexed: 11/16/2022]
Abstract
Hydrological regionalization is a useful step in hydrological modeling and prediction. The regionalization is not always straightforward, however, due to the lack of long-term hydrological data and the complex multi-scale variability features embedded in the data. This study examines the multiscale soil moisture variability for the simulated data on a grid cell base obtained from a large-scale hydrological model, and clusters the grid-cell based soil moisture data using wavelet-based multiscale entropy and principal component analysis, over the Xijiang River basin in South China, for the period of 2002-2010. The effective regionalization, for 169 grid cells with the special resolution of 0.5° × 0.5°, produced homogeneous groups based on the pattern of wavelet-based entropy information. Four distinct modes explain 80.14% of the total embedded variability of the transformed wavelet power across different timescales. Moreover, the possible implications of the regionalization results for local hydrological applications, such as parameter estimation for an ungagged catchment and designing a uniform prediction strategy for a sub-area in a large-scale basin, are discussed.
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Affiliation(s)
| | - Jun Niu
- Correspondence: ; Tel.: +86-10-6273-7911
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Wavelet Transform Application for/in Non-Stationary Time-Series Analysis: A Review. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app9071345] [Citation(s) in RCA: 82] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Non-stationary time series (TS) analysis has gained an explosive interest over the recent decades in different applied sciences. In fact, several decomposition methods were developed in order to extract various components (e.g., seasonal, trend and abrupt components) from the non-stationary TS, which allows for an improved interpretation of the temporal variability. The wavelet transform (WT) has been successfully applied over an extraordinary range of fields in order to decompose the non-stationary TS into time-frequency domain. For this reason, the WT method is briefly introduced and reviewed in this paper. In addition, this latter includes different research and applications of the WT to non-stationary TS in seven different applied sciences fields, namely the geo-sciences and geophysics, remote sensing in vegetation analysis, engineering, hydrology, finance, medicine, and other fields, such as ecology, renewable energy, chemistry and history. Finally, five challenges and future works, such as the selection of the type of wavelet, selection of the adequate mother wavelet, selection of the scale, the combination between wavelet transform and machine learning algorithm and the interpretation of the obtained components, are also discussed.
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Roushangar K, Alizadeh F, Adamowski J. Exploring the effects of climatic variables on monthly precipitation variation using a continuous wavelet-based multiscale entropy approach. ENVIRONMENTAL RESEARCH 2018; 165:176-192. [PMID: 29709779 DOI: 10.1016/j.envres.2018.04.017] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2018] [Revised: 03/20/2018] [Accepted: 04/18/2018] [Indexed: 06/08/2023]
Abstract
Understanding precipitation on a regional basis is an important component of water resources planning and management. The present study outlines a methodology based on continuous wavelet transform (CWT) and multiscale entropy (CWME), combined with self-organizing map (SOM) and k-means clustering techniques, to measure and analyze the complexity of precipitation. Historical monthly precipitation data from 1960 to 2010 at 31 rain gauges across Iran were preprocessed by CWT. The multi-resolution CWT approach segregated the major features of the original precipitation series by unfolding the structure of the time series which was often ambiguous. The entropy concept was then applied to components obtained from CWT to measure dispersion, uncertainty, disorder, and diversification of subcomponents. Based on different validity indices, k-means clustering captured homogenous areas more accurately, and additional analysis was performed based on the outcome of this approach. The 31 rain gauges in this study were clustered into 6 groups, each one having a unique CWME pattern across different time scales. The results of clustering showed that hydrologic similarity (multiscale variation of precipitation) was not based on geographic contiguity. According to the pattern of entropy across the scales, each cluster was assigned an entropy signature that provided an estimation of the entropy pattern of precipitation data in each cluster. Based on the pattern of mean CWME for each cluster, a characteristic signature was assigned, which provided an estimation of the CWME of a cluster across scales of 1-2, 3-8, and 9-13 months relative to other stations. The validity of the homogeneous clusters demonstrated the usefulness of the proposed approach to regionalize precipitation. Further analysis based on wavelet coherence (WTC) was performed by selecting central rain gauges in each cluster and analyzing against temperature, wind, Multivariate ENSO index (MEI), and East Atlantic (EA) and North Atlantic Oscillation (NAO), indeces. The results revealed that all climatic features except NAO influenced precipitation in Iran during the 1960-2010 period.
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Affiliation(s)
- Kiyoumars Roushangar
- Department of Water Resources Engineering, Faculty of Civil Engineering, University of Tabriz, Tabriz, Iran.
| | - Farhad Alizadeh
- Department of Water Resources Engineering, Faculty of Civil Engineering, University of Tabriz, Tabriz, Iran.
| | - Jan Adamowski
- Department of Bioresource Engineering, McGill University, 21 111 Lakeshore Road, Ste. Anne de Bellevue, QC, Canada H9X 3V9.
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Investigation into Multi-Temporal Scale Complexity of Streamflows and Water Levels in the Poyang Lake Basin, China. ENTROPY 2017. [DOI: 10.3390/e19020067] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Mining Informative Hydrologic Data by Using Support Vector Machines and Elucidating Mined Data according to Information Entropy. ENTROPY 2015. [DOI: 10.3390/e17031023] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Yang X, Zhang H, Zhou H. A Hybrid Methodology for Salinity Time Series Forecasting Based on Wavelet Transform and NARX Neural Networks. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2014. [DOI: 10.1007/s13369-014-1243-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Discrete Wavelet Entropy Aided Detection of Abrupt Change: A Case Study in the Haihe River Basin, China. ENTROPY 2012. [DOI: 10.3390/e14071274] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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