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Bardella G, Giuffrida V, Giarrocco F, Brunamonti E, Pani P, Ferraina S. Response inhibition in premotor cortex corresponds to a complex reshuffle of the mesoscopic information network. Netw Neurosci 2024; 8:597-622. [PMID: 38952814 PMCID: PMC11168728 DOI: 10.1162/netn_a_00365] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 01/18/2024] [Indexed: 07/03/2024] Open
Abstract
Recent studies have explored functional and effective neural networks in animal models; however, the dynamics of information propagation among functional modules under cognitive control remain largely unknown. Here, we addressed the issue using transfer entropy and graph theory methods on mesoscopic neural activities recorded in the dorsal premotor cortex of rhesus monkeys. We focused our study on the decision time of a Stop-signal task, looking for patterns in the network configuration that could influence motor plan maturation when the Stop signal is provided. When comparing trials with successful inhibition to those with generated movement, the nodes of the network resulted organized into four clusters, hierarchically arranged, and distinctly involved in information transfer. Interestingly, the hierarchies and the strength of information transmission between clusters varied throughout the task, distinguishing between generated movements and canceled ones and corresponding to measurable levels of network complexity. Our results suggest a putative mechanism for motor inhibition in premotor cortex: a topological reshuffle of the information exchanged among ensembles of neurons.
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Affiliation(s)
- Giampiero Bardella
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Valentina Giuffrida
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Franco Giarrocco
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Emiliano Brunamonti
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Pierpaolo Pani
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Stefano Ferraina
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
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Succar R, Ramallo S, Das R, Ventura RB, Porfiri M. Understanding the role of media in the formation of public sentiment towards the police. COMMUNICATIONS PSYCHOLOGY 2024; 2:11. [PMID: 39242917 PMCID: PMC11332102 DOI: 10.1038/s44271-024-00059-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Accepted: 01/19/2024] [Indexed: 09/09/2024]
Abstract
Public sentiment towards the police is a matter of great interest in the United States, as reports on police misconduct are increasingly being published in mass and social media. Here, we test how the public's perception of the police can be majorly shaped by media reports of police brutality and local crime. We collect data on media coverage of police brutality and local crime, together with Twitter posts from 2010-2020 about the police in 18 metropolitan areas in the country. Using a range of model-free approaches building on transfer entropy analysis, we discover an association between public sentiment towards the police and media coverage of police brutality. We cautiously interpret this relationship as causal. Through this lens, the public's sentiment towards the police appears to be driven by media-projected images of police misconduct, with no statistically significant evidence for a comparable effect driven by media reports on crimes.
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Affiliation(s)
- Rayan Succar
- Center for Urban Science and Progress, New York University, Brooklyn, NY, 11201, USA
- Department of Mechanical and Aerospace Engineering, Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA
| | - Salvador Ramallo
- Center for Urban Science and Progress, New York University, Brooklyn, NY, 11201, USA
- Department of Quantitative Methods, University of Murcia, Murcia, 30100, Spain
| | - Rishita Das
- Center for Urban Science and Progress, New York University, Brooklyn, NY, 11201, USA
- Department of Mechanical and Aerospace Engineering, Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA
| | - Roni Barak Ventura
- Center for Urban Science and Progress, New York University, Brooklyn, NY, 11201, USA
- Department of Mechanical and Aerospace Engineering, Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA
| | - Maurizio Porfiri
- Center for Urban Science and Progress, New York University, Brooklyn, NY, 11201, USA.
- Department of Mechanical and Aerospace Engineering, Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA.
- Department of Biomedical Engineering, Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA.
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Papana A. Connectivity Analysis for Multivariate Time Series: Correlation vs. Causality. ENTROPY (BASEL, SWITZERLAND) 2021; 23:1570. [PMID: 34945876 PMCID: PMC8700128 DOI: 10.3390/e23121570] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2021] [Revised: 11/17/2021] [Accepted: 11/24/2021] [Indexed: 12/16/2022]
Abstract
The study of the interdependence relationships of the variables of an examined system is of great importance and remains a challenging task. There are two distinct cases of interdependence. In the first case, the variables evolve in synchrony, connections are undirected and the connectivity is examined based on symmetric measures, such as correlation. In the second case, a variable drives another one and they are connected with a causal relationship. Therefore, directed connections entail the determination of the interrelationships based on causality measures. The main open question that arises is the following: can symmetric correlation measures or directional causality measures be applied to infer the connectivity network of an examined system? Using simulations, we demonstrate the performance of different connectivity measures in case of contemporaneous or/and temporal dependencies. Results suggest the sensitivity of correlation measures when temporal dependencies exist in the data. On the other hand, causality measures do not spuriously indicate causal effects when data present only contemporaneous dependencies. Finally, the necessity of introducing effective instantaneous causality measures is highlighted since they are able to handle both contemporaneous and causal effects at the same time. Results based on instantaneous causality measures are promising; however, further investigation is required in order to achieve an overall satisfactory performance.
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Affiliation(s)
- Angeliki Papana
- Department of Economics, University of Macedonia, 54636 Thessaloniki, Greece
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Mares C, Mares I, Dobrica V, Demetrescu C. Quantification of the Direct Solar Impact on Some Components of the Hydro-Climatic System. ENTROPY 2021; 23:e23060691. [PMID: 34072681 PMCID: PMC8228176 DOI: 10.3390/e23060691] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/18/2021] [Revised: 05/18/2021] [Accepted: 05/27/2021] [Indexed: 11/22/2022]
Abstract
This study addresses the causal links between external factors and the main hydro-climatic variables by using a chain of methods to unravel the complexity of the direct sun–climate link. There is a gap in the literature on the description of a complete chain in addressing the structures of direct causal links of solar activity on terrestrial variables. This is why the present study uses the extensive facilities of the application of information theory in view of recent advances in different fields. Additionally, by other methods (e.g., neural networks) we first tested the existent non-linear links of solar–terrestrial influences on the hydro-climate system. The results related to the solar impact on terrestrial phenomena are promising, which is discriminant in the space-time domain. The implications prove robust for determining the causal measure of climate variables under direct solar impact, which makes it easier to consider solar activity in climate models by appropriate parametrizations. This study found that hydro-climatic variables are sensitive to solar impact only for certain frequencies (periods) and have a coherence with the Solar Flux only for some lags of the Solar Flux (in advance).
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Krieger MS, Moreau JM, Zhang H, Chien M, Zehnder JL, Craig M. A Blueprint for Identifying Phenotypes and Drug Targets in Complex Disorders with Empirical Dynamics. PATTERNS (NEW YORK, N.Y.) 2020; 1:100138. [PMID: 33336196 PMCID: PMC7733879 DOI: 10.1016/j.patter.2020.100138] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Revised: 09/25/2020] [Accepted: 10/12/2020] [Indexed: 02/06/2023]
Abstract
A central challenge in medicine is translating from observational understanding to mechanistic understanding, where some observations are recognized as causes for the others. This can lead not only to new treatments and understanding, but also to recognition of novel phenotypes. Here, we apply a collection of mathematical techniques (empirical dynamics), which infer mechanistic networks in a model-free manner from longitudinal data, to hematopoiesis. Our study consists of three subjects with markers for cyclic thrombocytopenia, in which multiple cells and proteins undergo abnormal oscillations. One subject has atypical markers and may represent a rare phenotype. Our analyses support this contention, and also lend new evidence to a theory for the cause of this disorder. Simulations of an intervention yield encouraging results, even when applied to patient data outside our three subjects. These successes suggest that this blueprint has broader applicability in understanding and treating complex disorders.
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Affiliation(s)
- Madison S. Krieger
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
| | - Joshua M. Moreau
- Department of Dermatology, University of California, San Francisco, CA, USA
| | - Haiyu Zhang
- Department of Pathology, Stanford School of Medicine, Stanford, CA, USA
| | - May Chien
- Department of Medicine (Hematology), Stanford, CA, USA
| | - James L. Zehnder
- Department of Pathology, Stanford School of Medicine, Stanford, CA, USA
- Department of Medicine (Hematology), Stanford, CA, USA
| | - Morgan Craig
- Département de Mathématiques et de Statistique, Université de Montréal, Montréal, QC, Canada
- CHU Sainte-Justine Research Centre, 3175 Chemin de la Côte-Sainte-Catherine, Montréal, QC H3T 1C5, Canada
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M. Lopes A, Tenreiro Machado JA. Complex Systems and Fractional Dynamics. ENTROPY (BASEL, SWITZERLAND) 2018; 20:e20070507. [PMID: 33265597 PMCID: PMC7513027 DOI: 10.3390/e20070507] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Accepted: 07/02/2018] [Indexed: 06/12/2023]
Abstract
Complex systems (CS) are pervasive in many areas of science and technology, namely in financialmarkets, transportation, telecommunication and social networks, world and country economies,immunological systems, living organisms, computational systems, and electrical and mechanicalstructures [...].
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Affiliation(s)
- António M. Lopes
- UISPA–LAETA/INEGI, Faculty of Engineering, University of Porto, R. Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - J. A. Tenreiro Machado
- Institute of Engineering, Polytechnic of Porto, Department of Electrical Engineering, R. Dr. António Bernardino de Almeida, 431, 4249-015 Porto, Portugal
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