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Ashe P, Tu K, Stobbs JA, Dynes JJ, Vu M, Shaterian H, Kagale S, Tanino KK, Wanasundara JPD, Vail S, Karunakaran C, Quilichini TD. Applications of synchrotron light in seed research: an array of x-ray and infrared imaging methodologies. FRONTIERS IN PLANT SCIENCE 2025; 15:1395952. [PMID: 40034948 PMCID: PMC11873090 DOI: 10.3389/fpls.2024.1395952] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 12/26/2024] [Indexed: 03/05/2025]
Abstract
Synchrotron radiation (SR) provides a wide spectrum of bright light that can be tailored to test myriad research questions. SR provides avenues to illuminate structure and composition across scales, making it ideally suited to the study of plants and seeds. Here, we present an array of methodologies and the data outputs available at a light source facility. Datasets feature seed and grain from a range of crop species including Citrullus sp. (watermelon), Brassica sp. (canola), Pisum sativum (pea), and Triticum durum (wheat), to demonstrate the power of SR for advancing plant science. The application of SR micro-computed tomography (SR-µCT) imaging revealed internal seed microstructures and their three-dimensional morphologies in exquisite detail, without the need for destructive sectioning. Spectroscopy in the infrared spectrum probed sample biochemistry, detailing the spatial distribution of seed macronutrients such as lipid, protein and carbohydrate in the embryo, endosperm and seed coat. Methods using synchrotron X-rays, including X-ray absorption spectroscopy (XAS) and X-ray fluorescence (XRF) imaging revealed elemental distributions, to spatially map micronutrients in seed subcompartments and to determine their speciation. Synchrotron spectromicroscopy (SM) allowed chemical composition to be resolved at the nano-scale level. Diverse crop seed datasets showcase the range of structural and chemical insights provided by five beamlines at the Canadian Light Source, and the potential for synchrotron imaging for informing plant and agricultural research.
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Affiliation(s)
- Paula Ashe
- Aquatic and Crop Resource Development, National Research Council Canada, Saskatoon, SK, Canada
| | - Kaiyang Tu
- Canadian Light Source Inc., Saskatoon, SK, Canada
| | | | | | - Miranda Vu
- Canadian Light Source Inc., Saskatoon, SK, Canada
| | - Hamid Shaterian
- Aquatic and Crop Resource Development, National Research Council Canada, Saskatoon, SK, Canada
| | - Sateesh Kagale
- Aquatic and Crop Resource Development, National Research Council Canada, Saskatoon, SK, Canada
| | - Karen K. Tanino
- Department of Plant Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, SK, Canada
| | | | - Sally Vail
- Agriculture and Agri-Food Canada, Saskatoon Research Centre, Saskatoon, SK, Canada
| | | | - Teagen D. Quilichini
- Aquatic and Crop Resource Development, National Research Council Canada, Saskatoon, SK, Canada
- Department of Biology, College of Arts and Science, University of Saskatchewan, Saskatoon, SK, Canada
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Indore NS, Chaudhry M, Jayas DS, Paliwal J, Karunakaran C. Non-Destructive Assessment of Microstructural Changes in Kabuli Chickpeas during Storage. Foods 2024; 13:433. [PMID: 38338568 PMCID: PMC10855213 DOI: 10.3390/foods13030433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Revised: 01/16/2024] [Accepted: 01/22/2024] [Indexed: 02/12/2024] Open
Abstract
The potential of hyperspectral imaging (HSI) and synchrotron phase-contrast micro computed tomography (SR-µCT) was evaluated to determine changes in chickpea quality during storage. Chickpea samples were stored for 16 wk at different combinations of moisture contents (MC of 9%, 11%, 13%, and 15% wet basis) and temperatures (10 °C, 20 °C, and 30 °C). Hyperspectral imaging was utilized to investigate the overall quality deterioration, and SR-µCT was used to study the microstructural changes during storage. Principal component analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA) were used as multivariate data analysis approaches for HSI data. Principal component analysis successfully grouped the samples based on relative humidity (RH) and storage temperatures, and the PLS-DA classification also resulted in reliable accuracy (between 80 and 99%) for RH-based and temperature-based classification. The SR-µCT results revealed that microstructural changes in kernels (9% and 15% MC) were dominant at higher temperatures (above 20 °C) as compared to lower temperatures (10 °C) during storage due to accelerated spoilage at higher temperatures (above 20 °C). Chickpeas which had internal irregularities like cracked endosperm and air spaces before storage were spoiled at lower moisture from 8 wk of storage.
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Affiliation(s)
- Navnath S. Indore
- Department of Biosystems Engineering, University of Manitoba, 75 Chancellors Circle, Winnipeg, MB R3T 5V6, Canada; (N.S.I.); (M.C.); (J.P.); (C.K.)
| | - Mudassir Chaudhry
- Department of Biosystems Engineering, University of Manitoba, 75 Chancellors Circle, Winnipeg, MB R3T 5V6, Canada; (N.S.I.); (M.C.); (J.P.); (C.K.)
| | - Digvir S. Jayas
- Department of Biosystems Engineering, University of Manitoba, 75 Chancellors Circle, Winnipeg, MB R3T 5V6, Canada; (N.S.I.); (M.C.); (J.P.); (C.K.)
- President’s Office, A762 University Hall, University of Lethbridge, Lethbridge, AB T1K 3M4, Canada
| | - Jitendra Paliwal
- Department of Biosystems Engineering, University of Manitoba, 75 Chancellors Circle, Winnipeg, MB R3T 5V6, Canada; (N.S.I.); (M.C.); (J.P.); (C.K.)
| | - Chithra Karunakaran
- Department of Biosystems Engineering, University of Manitoba, 75 Chancellors Circle, Winnipeg, MB R3T 5V6, Canada; (N.S.I.); (M.C.); (J.P.); (C.K.)
- Canadian Light Source Inc., Saskatoon, SK S7N 2V3, Canada
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