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Wlodarczyk A, Treda C, Pacholczyk M, Rutkowska A, Wegierska M, Kierasinska-Kalka A, Wasiak K, Ciunowicz D, Grot D, Glowacki P, Stoczynska-Fidelus E, Rieske P. First molecules to reactivate RAS G12V GTPase activity. BMC Cancer 2025; 25:182. [PMID: 39891136 PMCID: PMC11783748 DOI: 10.1186/s12885-025-13580-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Accepted: 01/21/2025] [Indexed: 02/03/2025] Open
Abstract
BACKGROUND Small-molecule compounds that even partially restore the GTPase activity of RASG12V can be used in anticancer therapy. Until now, attempts to obtain such compounds have failed. Compounds with this ability have been defined in our research. METHODS The compounds were initially identified through virtual screening, and their optimal binding conformation in the RAS SW-II pocket was determined using the flexible docking technique. Efficacy was verified based on the IC50 determination, GTPase activity, as well as the AKT and ERK phospho WB assays. RESULTS The IC50 of the tested compounds was significantly lower against cells with the RASG12V mutation than against selected types of normal cells. The molecular mechanism of action of these compounds was proposed - minimization of the negative impact of the V12 sidechain on GTP hydrolysis of RASG12V. The work also indicates that the model of action of RAS mutants in cell lines is incomplete. The analysed cell line (SW-480) with RAS mutations does not always show increased ERK and AKT activity. CONCLUSIONS We have demonstrated molecules that partially restore the GTPase activity of RASG12V. Their mechanism of action is well explained based on current RAS mutant conformation and mechanistic models. These molecules inhibit the RAS-AKT pathway and show higher cytotoxicity against cancer cells with the RASG12V mutation (SW-480 cell line). However, SW-480 cells can switch into the subline proliferating independently of AKT phosphorylation and show partial resistance to the molecules described in this article.
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Affiliation(s)
- Aneta Wlodarczyk
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland.
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland.
| | - Cezary Treda
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland
| | - Marcin Pacholczyk
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland
- Department of Systems Biology and Engineering, Silesian University of Technology, Akademicka 16 St, Gliwice, 44-100, Poland
| | - Adrianna Rutkowska
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Molecular Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90-752, Poland
| | - Marta Wegierska
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland
| | - Amelia Kierasinska-Kalka
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland
| | - Katarzyna Wasiak
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland
| | - Damian Ciunowicz
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Molecular Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90-752, Poland
| | - Dagmara Grot
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland
| | - Pawel Glowacki
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
| | - Ewelina Stoczynska-Fidelus
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Molecular Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90-752, Poland
| | - Piotr Rieske
- Department of Research and Development, Personather, LTD, Inwestycyjna 7 St, Konstantynow Lodzki, 95-050, Poland
- Department of Tumor Biology, Chair of Medical Biology, Medical University of Lodz, Zeligowskiego 7/9 St, Lodz, 90- 752, Poland
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Huang W, Li J, Zhu H, Qin X, Chen C, Wang B, Wei J, Song Y, Lu X, Li Z, Xia W, He A, Cheng L, Yu X, Shu K, Wang W. A novel EGFR variant EGFRx maintains glioblastoma stem cells through STAT5. Neuro Oncol 2024; 26:85-99. [PMID: 37616578 PMCID: PMC10768976 DOI: 10.1093/neuonc/noad153] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Indexed: 08/26/2023] Open
Abstract
BACKGROUND Glioblastomas are universally lethal brain tumors containing tumor-propagating glioblastoma stem cells (GSCs). EGFR gene amplification or mutation is frequently detected in GBMs and is associated with poor prognosis. However, EGFR variants in GSCs and their role in the maintenance of GSCs and progression of GBM are unclear. METHODS EGFR variants were detected through bioinformatic HISAT-StringTie-Ballgown pipeline and verified through 5' RACE, RT-PCR, ribonuclease protection, and northern blotting assays. EGFRx function was investigated through neurosphere, cell viability, intracranial xenograft and RNA-seq assays. EGFRx-STAT5 signaling was investigated through western blotting, coimmunoprecipitation, immunofluorescence, luciferase reporter, RT-PCR and CUT&Tag assays. RESULTS We identified a novel EGFR variant (EGFRx), that is specifically expressed in GSCs. Unlike the EGFRvIII variant, which lacks exons 2-7, EGFRx is characterized by the absence of exons 2-14, and encodes an EGFR protein that does not possess the entire extracellular ligand-binding domain. We observed that EGFRx exhibits significant glycosylation, is required for GSC self-renewal, proliferation, and tumorigenesis, and highly active in glioblastomas compared to normal brain tissue. Mechanistically, EGFRx constitutively and specifically activates STAT5 in GSCs through spontaneous asymmetric dimerization of the kinase domain. CONCLUSIONS EGFRx plays essential roles in the maintenance of the GSC phenotype through constitutive activation of STAT5 and promotes GBM progression, suggesting that EGFRx-STAT5 signaling represents a promising therapeutic target for GBM.
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Affiliation(s)
- Wei Huang
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Jing Li
- Department of Integrated Traditional Chinese and Western Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Hongtao Zhu
- Department of Neurosurgery, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Xuhui Qin
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Chao Chen
- Department of Orthopaedics, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Bing Wang
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Jinxia Wei
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Yanyang Song
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Xia Lu
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Zhongyu Li
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Wenqing Xia
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Aodi He
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Lidong Cheng
- Department of Neurosurgery, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Xingjiang Yu
- Department of Histology and Embryology, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Kai Shu
- Department of Neurosurgery, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Wei Wang
- Department of Human Anatomy, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
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3
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Rutkowska A, Strózik T, Jędrychowska-Dańska K, Zamerska A, Jesionek-Kupnicka D, Kowalczyk T, Och W, Szóstak B, Tręda C, Włodarczyk A, Kierasińska-Kałka A, Wasiak T, Ciunowicz D, Rieske P, Stoczyńska-Fidelus E. Immunohistochemical detection of EGFRvIII in glioblastoma - Anti-EGFRvIII antibody validation for diagnostic and CAR-T purposes. Biochem Biophys Res Commun 2023; 685:149133. [PMID: 37918325 DOI: 10.1016/j.bbrc.2023.149133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 10/02/2023] [Accepted: 10/17/2023] [Indexed: 11/04/2023]
Abstract
The emergence of therapies such as CAR-T has created a need for reliable, validated methods for detecting EGFRvIII in patient tumor cells. Particularly so since previous studies have already suggested that some anti-EGFRvIII antibodies may be non-specific. The present paper evaluates the use of the L8A4 antibody in the immunohistochemical (IHC) and immunocytochemical (ICC) detection of EGFRvIII in 30 glioblastoma specimens, and compares it with other methods such as RT-PCR, MLPA, and FISH. The results indicate that Real-time PCR appears to be a very specific and sensitive method of EGFRvIII detection. ICC analysis with L8A4 also appears specific but requires cell culture. IHC analyses of EGFRvIII returned a number of false positives when using L8A4. Due to the growing need for an effective diagnostic tool before starting immunotherapy methods, such as the CAR-T anti-EGFRvIII or SynNotch CAR-T recognizing EGFRvIII, it is necessary to identify a more reliable and simple method of EGFRvIII detection or improve the specificity of the anti-EGFRvIII antibody, until then, immunocytochemistry may temporarily replace immunohistochemistry.
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Affiliation(s)
- Adrianna Rutkowska
- Department of Molecular Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland; Department of Research and Development, Celther Polska LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Research and Development, Personather LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland
| | - Tadeusz Strózik
- Department of Molecular Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland
| | | | - Alicja Zamerska
- Department of Molecular Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland
| | | | - Tamara Kowalczyk
- Department of Pathology, Chair of Oncology, Medical University of Lodz, Lodz, Poland
| | - Waldemar Och
- Clinical Department of Neurosurgery, The Regional Specialist Hospital in Olsztyn, Zolnierska 18, 10-561, Olsztyn, Poland
| | - Błażej Szóstak
- Department of Pathomorphology, The Regional Specialist Hospital in Olsztyn, Zolnierska 18, 10-561, Olsztyn, Poland
| | - Cezary Tręda
- Department of Research and Development, Celther Polska LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Research and Development, Personather LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland
| | - Aneta Włodarczyk
- Department of Research and Development, Celther Polska LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Research and Development, Personather LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland
| | - Amelia Kierasińska-Kałka
- Department of Research and Development, Celther Polska LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Research and Development, Personather LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland
| | - Tomasz Wasiak
- Department of Molecular Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland
| | - Damian Ciunowicz
- Department of Molecular Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland; Department of Research and Development, Celther Polska LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Research and Development, Personather LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland
| | - Piotr Rieske
- Department of Research and Development, Celther Polska LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Research and Development, Personather LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland
| | - Ewelina Stoczyńska-Fidelus
- Department of Molecular Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752, Lodz, Poland; Department of Research and Development, Celther Polska LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland; Department of Research and Development, Personather LTD, Inwestycyjna 7, 95-050, Konstantynow Lodzki, Poland.
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4
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Tręda C, Włodarczyk A, Pacholczyk M, Rutkowska A, Stoczyńska-Fidelus E, Kierasińska A, Rieske P. Increased EGFRvIII Epitope Accessibility after Tyrosine Kinase Inhibitor Treatment of Glioblastoma Cells Creates More Opportunities for Immunotherapy. Int J Mol Sci 2023; 24:4350. [PMID: 36901782 PMCID: PMC10001577 DOI: 10.3390/ijms24054350] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 02/10/2023] [Accepted: 02/17/2023] [Indexed: 02/24/2023] Open
Abstract
The number of glioblastoma (GB) cases is increasing every year, and the currently available therapies remain ineffective. A prospective antigen for GB therapy is EGFRvIII, an EGFR deletion mutant containing a unique epitope that is recognized by the L8A4 antibody used in CAR-T (chimeric antigen receptor T cell) therapy. In this study, we observed that the concomitant use of L8A4 with particular tyrosine kinase inhibitors (TKIs) does not impede the interaction between L8A4 and EGFRvIII; moreover, in this case, the stabilization of formed dimers results in increased epitope display. Unlike in wild-type EGFR, a free cysteine at position 16 (C16) is exposed in the extracellular structure of EGFRvIII monomers, leading to covalent dimer formation in the region of L8A4-EGFRvIII mutual interaction. Following in silico analysis of cysteines possibly involved in covalent homodimerization, we prepared constructs containing cysteine-serine substitutions of EGFRvIII in adjacent regions. We found that the extracellular part of EGFRvIII possesses plasticity in the formation of disulfide bridges within EGFRvIII monomers and dimers due to the engagement of cysteines other than C16. Our results suggest that the EGFRvIII-specific L8A4 antibody recognizes both EGFRvIII monomers and covalent dimers, regardless of the cysteine bridging structure. To summarize, immunotherapy based on the L8A4 antibody, including CAR-T combined with TKIs, can potentially increase the chances of success in anti-GB therapy.
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Affiliation(s)
- Cezary Tręda
- Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752 Lodz, Poland
- Department of Research and Development, Celther Polska Ltd., Inwestycyjna 7, 95-050 Konstantynow Lodzki, Poland
| | - Aneta Włodarczyk
- Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752 Lodz, Poland
- Department of Research and Development, Celther Polska Ltd., Inwestycyjna 7, 95-050 Konstantynow Lodzki, Poland
| | - Marcin Pacholczyk
- Department of Research and Development, Celther Polska Ltd., Inwestycyjna 7, 95-050 Konstantynow Lodzki, Poland
- Department of Systems Biology and Engineering, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland
| | - Adrianna Rutkowska
- Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752 Lodz, Poland
- Department of Research and Development, Celther Polska Ltd., Inwestycyjna 7, 95-050 Konstantynow Lodzki, Poland
| | - Ewelina Stoczyńska-Fidelus
- Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752 Lodz, Poland
- Department of Research and Development, Celther Polska Ltd., Inwestycyjna 7, 95-050 Konstantynow Lodzki, Poland
| | - Amelia Kierasińska
- Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752 Lodz, Poland
- Department of Research and Development, Celther Polska Ltd., Inwestycyjna 7, 95-050 Konstantynow Lodzki, Poland
| | - Piotr Rieske
- Department of Tumor Biology, Medical University of Lodz, Zeligowskiego 7/9, 90-752 Lodz, Poland
- Department of Research and Development, Celther Polska Ltd., Inwestycyjna 7, 95-050 Konstantynow Lodzki, Poland
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5
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Current and Future Perspectives for Chimeric Antigen Receptor T Cells Development in Poland. Biomedicines 2022; 10:biomedicines10112912. [PMID: 36428480 PMCID: PMC9687915 DOI: 10.3390/biomedicines10112912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Revised: 11/03/2022] [Accepted: 11/09/2022] [Indexed: 11/16/2022] Open
Abstract
Chimeric antigen receptor T (CAR-T) cells are genetically modified autologous T cells that have revolutionized the treatment of relapsing and refractory haematological malignancies. In this review we present molecular pathways involved in the activation of CAR-T cells, describe in details the structures of receptors and the biological activity of CAR-T cells currently approved for clinical practice in the European Union, and explain the functional differences between them. Finally, we present the potential for the development of CAR-T cells in Poland, as well as indicate the possible directions of future research in this area, including novel modifications and applications of CAR-T cells and CAR-natural killer (NK) cells.
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