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Guevara G, Espinoza Solorzano JS, Vargas Ramírez M, Rusu A, Navarro Llorens JM. Characterizing A21: Natural Cyanobacteria-Based Consortium with Potential for Steroid Bioremediation in Wastewater Treatment. Int J Mol Sci 2024; 25:13018. [PMID: 39684729 DOI: 10.3390/ijms252313018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2024] [Accepted: 11/26/2024] [Indexed: 12/18/2024] Open
Abstract
Microalga-bacteria consortia are increasingly recognized for their effectiveness in wastewater treatment, leveraging the metabolic synergy between microalgae and bacteria to enhance nutrient removal and overall treatment efficiency. These systems offer a sustainable approach to addressing pollutants such as nitrogen and phosphorus. However, their potential in removing specific contaminants like steroid hormones is less explored. In this study, a natural microbial consortium, A21, has been characterized and isolated from primary sewage treatment in Madrid and its potential for bioremediation of steroid hormone effluents has been evaluated. The A21 consortium includes Alphaproteobacteria genera Sphingopyxis and Pseudorhizobium and the Cyanobacterium Cyanobium. Sphingopyxis (31.78%) is known for biodegradation, while Pseudorhizobium (15.68%) exhibits detoxification abilities. Cyanobium (14.2%) may contribute to nutrient uptake and oxygen production. The effects of pH, nitrogen sources, and Sodium chloride concentrations on growth were evaluated. The optimal growth conditions were determined to be a pH range of 7 to 9, a salt concentration below 0.1 M, and the presence of a nitrogen source. The consortium also demonstrated effective growth across various types of wastewaters (primary, secondary, and tertiary treatment effluents). Additionally, A21 exhibited the ability to grow in the presence of steroids and transform them into other compounds, such as converting androstenedione (AD) into androsta-1,4-diene-3,17-dione (ADD) and β-estradiol into estrone.
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Affiliation(s)
- Govinda Guevara
- Department of Biochemistry and Molecular Biology, Universidad Complutense de Madrid, c/Jose Antonio Novais 12, 28040 Madrid, Spain
| | | | - Marta Vargas Ramírez
- Department of Genetics, Physiology and Microbiology, Universidad Complutense de Madrid, c/Jose Antonio Novais 12, 28040 Madrid, Spain
| | - Andrada Rusu
- Department of Biochemistry and Molecular Biology, Universidad Complutense de Madrid, c/Jose Antonio Novais 12, 28040 Madrid, Spain
| | - Juana María Navarro Llorens
- Department of Biochemistry and Molecular Biology, Universidad Complutense de Madrid, c/Jose Antonio Novais 12, 28040 Madrid, Spain
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Unimke AA, Okezie O, Mohammed SE, Mmuoegbulam AO, Abdullahi S, Ofon UA, Olim DM, Badamasi H, Galadima AI, Fatunla OK, Abdullahi A, Yahaya SM, Ibrahim MM, Muhammad AB, Iya NID, Ayanda OS. Microbe-plant-nanoparticle interactions: role in bioremediation of petroleum hydrocarbons. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2024; 90:2870-2893. [PMID: 39612179 DOI: 10.2166/wst.2024.362] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Accepted: 10/12/2024] [Indexed: 11/30/2024]
Abstract
Petroleum hydrocarbons (PHCs) are organic substances that occur naturally on earth. PHCs have emerged as one of the most prevalent and detrimental contaminants in regions comprising soil and water resources. The limitations of conventional physicochemical and biological remediation solutions could be solved by combining remediation techniques. An effective, affordable, and environmentally benign method of reducing petroleum toxins is provided by the advanced idea of bioremediation, which has evolved into nanobioremediation. Environments contaminated with PHCs have been restored through microbe-plant-nanoparticle (NP)-mediated remediation, this review emphasizes how various metallic NPs interact with microbes and plants changing both their activity and that of enzymes, therefore accelerating the remediation process. This work further examines the challenges and possible uses of nanobioremediation, as well as the application of novel technologies in the interactions between bacteria, plants, and NPs for the bioremediation of PHCs. Furthermore, it has been shown that the use of plant-based, microbe-based, microbe-plant-based, and microbe-plant-NP-based techniques to remediate contaminated soils or water bodies is economical and environmentally beneficial. Microbial consortia have been reported as the treasure houses for the cleaning and recovery of hydrocarbon-contaminated environments, and the development of technologies for bioremediation requires an understanding of hydrocarbon degradation mechanisms.
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Affiliation(s)
- Augustine A Unimke
- Department of Microbiology, Faculty of Biological Sciences, University of Calabar, PMB 1115 Calabar, Nigeria E-mail:
| | - Onyemaechi Okezie
- Department of Microbiology, Faculty of Biological Sciences, University of Calabar, PMB 1115 Calabar, Nigeria
| | - Sa'adatu E Mohammed
- Department of Chemistry, Faculty of Science, Federal University Dutse, Dutse, Jigawa, Nigeria
| | - Augusta O Mmuoegbulam
- Department of Microbiology, Faculty of Biological Sciences, University of Calabar, PMB 1115 Calabar, Nigeria
| | - Saidu Abdullahi
- Department of Botany, Faculty of Life Sciences, Ahmadu Bello University, Zaria, Nigeria
| | - Utibe A Ofon
- Department of Microbiology, University of Uyo, Uyo, Nigeria
| | - Denis M Olim
- Department of Soil Science, University of Calabar, Calabar, Nigeria
| | - Hamza Badamasi
- Department of Chemistry, Faculty of Science, Federal University Dutse, Dutse, Jigawa, Nigeria
| | - Abdulsalam I Galadima
- Department of Physics, Faculty of Physical Sciences, Ahmadu Bello University Zaria, Zaria, Nigeria
| | | | - Aminu Abdullahi
- Department of Biotechnology, Modibbo Adama University Yola, PMB 2076 Yola, Adamawa State, Nigeria
| | - Sharhabil M Yahaya
- Department of Soil Science, Faculty of Agriculture/Institute for Agricultural Research, Ahmadu Bello University Zaria, Zaria, Nigeria
| | | | - Abba B Muhammad
- Department of Mechanical Engineering, University of Maiduguri, Maiduguri, Nigeria
| | - Naseer I Durumin Iya
- Department of Chemistry, Faculty of Science, Federal University Dutse, Dutse, Jigawa, Nigeria
| | - Olushola S Ayanda
- Department of Industrial Chemistry, Federal University Oye-Ekiti, Ekiti, Nigeria
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Afrose N, Chakraborty R, Hazra A, Bhowmick P, Bhowmick M. AI-Driven Drug Discovery and Development. ADVANCES IN MEDICAL DIAGNOSIS, TREATMENT, AND CARE 2024:259-277. [DOI: https:/doi.org/10.4018/979-8-3693-3629-8.ch013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/05/2025]
Abstract
Artificial intelligence (AI) has revolutionized the discovery and development of new drugs in biomedicine. By using advanced algorithms and computational methods, AI optimizes treatment plans, accelerates the drug development process, and improves patient outcomes. AI algorithms integrate multi-omics data sets, decipher molecular connections, and identify therapeutic targets and biomarkers. High-throughput screening, predictive modeling, and AI-powered virtual screening platforms are revolutionizing the drug development pipeline. Machine learning and deep learning models enable drug-target interactions prediction, pharmacological evaluation, and experimental validation. Structure-based drug design methodologies accelerate the discovery of new therapies. AI-driven technologies enable personalized treatment plans for patients, taking into account their unique traits and disease profiles. Pharmacogenomics, when combined with predictive analytics, improves drug selection, dosage adjustment, and treatment response prediction, enhancing therapeutic efficacy and reducing side effects.
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Affiliation(s)
- Naureen Afrose
- Bengal College of Pharmaceutical Sciences and Research, India
| | | | - Ahana Hazra
- Bengal College of Pharmaceutical Sciences and Research, India
| | | | - Mithun Bhowmick
- Bengal College of Pharmaceutical Sciences and Research, India
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Kaya C, Uğurlar F, Ashraf M, Hou D, Kirkham MB, Bolan N. Microbial consortia-mediated arsenic bioremediation in agricultural soils: Current status, challenges, and solutions. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 917:170297. [PMID: 38272079 DOI: 10.1016/j.scitotenv.2024.170297] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 01/01/2024] [Accepted: 01/18/2024] [Indexed: 01/27/2024]
Abstract
Arsenic poisoning in agricultural soil is caused by both natural and man-made processes, and it poses a major risk to crop production and human health. Soil quality, agricultural production, runoff, ingestion, leaching, and absorption by plants are all influenced by these processes. Microbial consortia have become a feasible bioremediation technique in response to the urgent need for appropriate remediation solutions. These diverse microbial populations collaborate to combat arsenic poisoning in soil by facilitating mechanisms including oxidation-reduction, methylation-demethylation, volatilization, immobilization, and arsenic mobilization. The current state, problems, and remedies for employing microbial consortia in arsenic bioremediation in agricultural soils are examined in this review. Among the elements affecting their success include diversity, activity, community organization, and environmental conditions. Also, we emphasize the sensitivity and accuracy limits of existing assessment techniques. While earlier reviews have addressed a variety of arsenic remediation options, this study stands out by concentrating on microbial consortia as a viable strategy for arsenic removal and presents performance evaluation and technical problems. This work gives vital insights for tackling the major issue of arsenic pollution in agricultural soils by explaining the potential methods and components involved in microbial consortium-mediated arsenic bioremediation.
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Affiliation(s)
- Cengiz Kaya
- Soil Science and Plant Nutrition Department, Harran University, Sanliurfa, Turkey.
| | - Ferhat Uğurlar
- Soil Science and Plant Nutrition Department, Harran University, Sanliurfa, Turkey
| | - Muhammed Ashraf
- Institute of Molecular Biology and Biotechnology, The University of Lahore, Pakistan
| | - Deyi Hou
- School of Environment, Tsinghua University, Beijing 100084, People's Republic of China
| | - Mary Beth Kirkham
- Department of Agronomy, Throckmorton Plant Sciences Center, Kansas State University, Manhattan, KS, United States
| | - Nanthi Bolan
- UWA School of Agriculture and Environment, The University of Western Australia, Perth, Western Australia 6009, Australia; The UWA Institute of Agriculture, The University of Western Australia, Perth, Western Australia 6009, Australia
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Efremenko E, Stepanov N, Senko O, Aslanli A, Maslova O, Lyagin I. Using Fungi in Artificial Microbial Consortia to Solve Bioremediation Problems. Microorganisms 2024; 12:470. [PMID: 38543521 PMCID: PMC10974216 DOI: 10.3390/microorganisms12030470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Revised: 02/12/2024] [Accepted: 02/23/2024] [Indexed: 11/12/2024] Open
Abstract
There is currently growing interest in the creation of artificial microbial consortia, especially in the field of developing and applying various bioremediation processes. Heavy metals, dyes, synthetic polymers (microplastics), pesticides, polycyclic aromatic hydrocarbons and pharmaceutical agents are among the pollutants that have been mainly targeted by bioremediation based on various consortia containing fungi (mycelial types and yeasts). Such consortia can be designed both for the treatment of soil and water. This review is aimed at analyzing the recent achievements in the research of the artificial microbial consortia that are useful for environmental and bioremediation technologies, where various fungal cells are applied. The main tendencies in the formation of certain microbial combinations, and preferences in their forms for usage (suspended or immobilized), are evaluated using current publications, and the place of genetically modified cells in artificial consortia with fungi is assessed. The effect of multicomponence of the artificial consortia containing various fungal cells is estimated, as well as the influence of this factor on the functioning efficiency of the consortia and the pollutant removal efficacy. The conclusions of the review can be useful for the development of new mixed microbial biocatalysts and eco-compatible remediation processes that implement fungal cells.
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Affiliation(s)
- Elena Efremenko
- Faculty of Chemistry, Lomonosov Moscow State University, Lenin Hills 1/3, Moscow 119991, Russia; (N.S.)
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Hosseini F, Hadian M, Lashani E, Moghimi H. Simultaneous bioreduction of tellurite and selenite by Yarrowia lipolytica, Trichosporon cutaneum, and their co-culture along with characterization of biosynthesized Te-Se nanoparticles. Microb Cell Fact 2023; 22:193. [PMID: 37749532 PMCID: PMC10519092 DOI: 10.1186/s12934-023-02204-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Accepted: 09/18/2023] [Indexed: 09/27/2023] Open
Abstract
BACKGROUND Natural and anthropogenic activities, such as weathering of rocks and industrial processes, result in the release of toxic oxyanions such as selenium (Se) and tellurium (Te) into the environment. Due to the high toxicity of these compounds, their removal from the environment is vital. RESULTS In this study, two yeast strains, Yarrowia lipolytica and Trichosporon cutaneum, were selected as the superior strains for the bioremediation of tellurium and selenium. The reduction analyses showed that exposure to selenite induced more detrimental effects on the strains compared to tellurite. In addition, co-reduction of pollutants displayed almost the same results in selenite reduction and more than ~ 20% higher tellurite reduction in 50 h, which shows that selenite triggered higher tellurite reduction in both strains. The selenite and tellurite kinetics of removal were consistent with the first-order model because of their inhibitory behavior. The result of several characterization experiments, such as FE-SEM (Field emission scanning electron microscopy), dynamic light scattering (DLS), Fourier-transform infrared spectroscopy (FTIR), X-ray diffractometer (XRD), and dispersive X-ray (EDX) on Te-Se nanoparticles (NPs) revealed that the separated Te-Se NPs were needle-like, spherical, and amorphous, consisted of Te-Se NPs ranging from 25 to 171 nm in size, and their surface was covered with different biomolecules. CONCLUSIONS Remarkably, this work shows, for the first time, the simultaneous bioreduction of tellurite and selenite and the production of Te-Se NPs using yeast strains, indicating their potential in this area, which may be applied to the nanotechnology industry and environmental remediation.
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Affiliation(s)
- Firooz Hosseini
- Department of Microbiology, School of Biology, College of Science, University of Tehran, Tehran, Iran
| | - Maryam Hadian
- Department of Microbiology, School of Biology, College of Science, University of Tehran, Tehran, Iran
| | - Elham Lashani
- Department of Microbiology, School of Biology, College of Science, University of Tehran, Tehran, Iran
| | - Hamid Moghimi
- Department of Microbiology, School of Biology, College of Science, University of Tehran, Tehran, Iran.
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Lashani E, Moghimi H, J Turner R, Amoozegar MA. Selenite bioreduction by a consortium of halophilic/halotolerant bacteria and/or yeasts in saline media. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023:121948. [PMID: 37270053 DOI: 10.1016/j.envpol.2023.121948] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2023] [Revised: 05/18/2023] [Accepted: 05/31/2023] [Indexed: 06/05/2023]
Abstract
Selenium oxyanions are released into environments by natural and anthropogenic activities and are present in agricultural and glass manufacturing wastewater in several locations worldwide. Excessive amounts of this metalloid have adverse effects on the health of living organisms. Halophilic and halotolerant microorganisms were selected for selenium oxyanions remediation due to presence of significant amount of salt in selenium-containing wastewater. Effects of aeration, carbon sources, competitive electron acceptors, and reductase inhibitors were investigated on SeO32- bio-removal. Additionally, NO3--containing wastewater were exploited to investigate SeO32- remediation in synthetic agricultural effluents. The results showed that the SeO32- removal extent is maximum in aerobic conditions with succinate as a carbon source. SO42- and PO43- do not significantly interfere with SeO32- reduction, while WO42- and TeO32- decrease the SeO32- removal percentage (up to 35 and 37%, respectively). Furthermore, NO3- had an adverse effect on SeO32- biotransformation by our consortia. All consortia reduced SeO32- in synthetic agricultural wastewaters with a 45-53% removal within 120 h. This study suggests that consortia of halophilic/halotolerant bacteria and yeasts could be applied to treat SeO32--contaminated drainage water. In addition, sulphates, and phosphates do not interfere with selenite bioreduction by these consortia, which makes them suitable candidates for the bioremediation of selenium-containing wastewater.
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Affiliation(s)
- Elham Lashani
- Extremophiles Laboratory, Department of Microbiology, School of Biology, College of Science, University of Tehran, Tehran, Iran
| | - Hamid Moghimi
- Department of Microbiology, School of Biology, College of Science, University of Tehran, Tehran, Iran.
| | - Raymond J Turner
- Microbial Biochemistry Laboratory, Department of Biological Sciences, University of Calgary, 2500 University Dr. NW, Calgary, AB, T2N 1N4, Canada
| | - Mohammad Ali Amoozegar
- Extremophiles Laboratory, Department of Microbiology, School of Biology, College of Science, University of Tehran, Tehran, Iran
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