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For: Emond-Rheault JG, Hamel J, Jeukens J, Freschi L, Kukavica-Ibrulj I, Boyle B, Tamber S, Malo D, Franz E, Burnett E, Daigle F, Arya G, Sanderson K, Wiedmann M, Slawson RM, Weadge JT, Stephan R, Bekal S, Gruenheid S, Goodridge LD, Levesque RC. The Salmonella enterica Plasmidome as a Reservoir of Antibiotic Resistance. Microorganisms 2020;8:E1016. [PMID: 32650601 DOI: 10.3390/microorganisms8071016] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Revised: 06/19/2020] [Accepted: 06/29/2020] [Indexed: 01/08/2023]  Open
Number Cited by Other Article(s)
1
Zuo H, Yang Y, Su M, Huang W, Wang J, Lei G, Kong X, Chen P, Leng Y, Yuan Q, Zhao Y, Miao Y, Li M, Xu X, Lu S, Yang H, Tian L. Comparative genomic and antimicrobial resistance profiles of Salmonella strains isolated from pork and human sources in Sichuan, China. Front Microbiol 2025;16:1515576. [PMID: 40099182 PMCID: PMC11911478 DOI: 10.3389/fmicb.2025.1515576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2024] [Accepted: 02/17/2025] [Indexed: 03/19/2025]  Open
2
Flores-Vargas G, Bergsveinson J, Korber DR. Environmentally Relevant Antibiotic Concentrations Exert Stronger Selection Pressure on River Biofilm Resistomes than AMR-Reservoir Effluents. Antibiotics (Basel) 2024;13:539. [PMID: 38927205 PMCID: PMC11200958 DOI: 10.3390/antibiotics13060539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 05/22/2024] [Accepted: 05/28/2024] [Indexed: 06/28/2024]  Open
3
Van Puyvelde S, de Block T, Sridhar S, Bawn M, Kingsley RA, Ingelbeen B, Beale MA, Barbé B, Jeon HJ, Mbuyi-Kalonji L, Phoba MF, Falay D, Martiny D, Vandenberg O, Affolabi D, Rutanga JP, Ceyssens PJ, Mattheus W, Cuypers WL, van der Sande MAB, Park SE, Kariuki S, Otieno K, Lusingu JPA, Mbwana JR, Adjei S, Sarfo A, Agyei SO, Asante KP, Otieno W, Otieno L, Tahita MC, Lompo P, Hoffman IF, Mvalo T, Msefula C, Hassan-Hanga F, Obaro S, Mackenzie G, Deborggraeve S, Feasey N, Marks F, MacLennan CA, Thomson NR, Jacobs J, Dougan G, Kariuki S, Lunguya O. A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan Africa. Nat Commun 2023;14:6392. [PMID: 37872141 PMCID: PMC10593746 DOI: 10.1038/s41467-023-41152-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Accepted: 08/23/2023] [Indexed: 10/25/2023]  Open
4
Moyne AL, Lawal OU, Gauthier J, Kukavica-Ibrulj I, Potvin M, Goodridge L, Levesque RC, Harris LJ. Genetic diversity of Salmonella enterica isolated over 13 years from raw California almonds and from an almond orchard. PLoS One 2023;18:e0291109. [PMID: 37676871 PMCID: PMC10484465 DOI: 10.1371/journal.pone.0291109] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Accepted: 08/22/2023] [Indexed: 09/09/2023]  Open
5
Adedokun FL, Ajayi A, Essiet UU, Oduyebo O, Adeleye AI, Smith SI. Antibiotic Resistance and Plasmid Replicon Types of Non-Typhoidal Salmonella Serovars Isolated From Food Animals and Humans in Lagos, Nigeria. Microbiol Insights 2023;16:11786361231181909. [PMID: 37377945 PMCID: PMC10291401 DOI: 10.1177/11786361231181909] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 05/26/2023] [Indexed: 06/29/2023]  Open
6
Zhang H, Wang M, Han X, Wang T, Lei Y, Rao Y, Xu P, Wang Y, Gu H. The application of targeted nanopore sequencing for the identification of pathogens and resistance genes in lower respiratory tract infections. Front Microbiol 2022;13:1065159. [PMID: 36620015 PMCID: PMC9822541 DOI: 10.3389/fmicb.2022.1065159] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 11/28/2022] [Indexed: 12/24/2022]  Open
7
Li Z, Pang B, Lu X, Kan B, Kan B, School of Public Health, Shandong University, Jinan City, China. The Establishment and Application of a Kraken Classifier for Salmonella Plasmid Sequence Prediction. China CDC Wkly 2022;4:1110-1116. [PMID: 36751662 PMCID: PMC9889229 DOI: 10.46234/ccdcw2022.225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Accepted: 12/05/2022] [Indexed: 12/13/2022]  Open
8
Emergence and spread of antibiotic-resistant foodborne pathogens from farm to table. Food Sci Biotechnol 2022;31:1481-1499. [PMID: 36065433 PMCID: PMC9435411 DOI: 10.1007/s10068-022-01157-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Revised: 07/26/2022] [Accepted: 08/17/2022] [Indexed: 11/13/2022]  Open
9
Ramtahal MA, Amoako DG, Ismail A, Bester L, Abia ALK, Essack SY. Salmonella Yoruba: a rare serotype revealed through genomic sequencing along the farm-to-fork continuum of an intensive poultry farm in KwaZulu-Natal, South Africa. Acta Trop 2022;234:106620. [PMID: 35907503 DOI: 10.1016/j.actatropica.2022.106620] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 07/08/2022] [Accepted: 07/26/2022] [Indexed: 11/01/2022]
10
Cheng RA, Orsi RH, Wiedmann M. The Number and Type of Chaperone-Usher Fimbriae Reflect Phylogenetic Clade Rather than Host Range in Salmonella. mSystems 2022;7:e0011522. [PMID: 35467401 PMCID: PMC9238391 DOI: 10.1128/msystems.00115-22] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 04/03/2022] [Indexed: 01/21/2023]  Open
11
Trachsel JM, Bearson BL, Brunelle BW, Bearson SMD. Relationship and distribution of Salmonella enterica serovar I 4,[5],12:i:- strain sequences in the NCBI Pathogen Detection database. BMC Genomics 2022;23:268. [PMID: 35387579 PMCID: PMC8985322 DOI: 10.1186/s12864-022-08458-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Accepted: 02/10/2022] [Indexed: 11/14/2022]  Open
12
Otunba AA, Osuntoki AA, Olukoya DK, Babalola BA. Genomic, biochemical and microbial evaluation of probiotic potentials of bacterial isolates from fermented sorghum products. Heliyon 2021;7:e08536. [PMID: 34926862 PMCID: PMC8646963 DOI: 10.1016/j.heliyon.2021.e08536] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Revised: 08/11/2021] [Accepted: 11/29/2021] [Indexed: 12/24/2022]  Open
13
Li C, Tyson GH, Hsu CH, Harrison L, Strain E, Tran TT, Tillman GE, Dessai U, McDermott PF, Zhao S. Long-Read Sequencing Reveals Evolution and Acquisition of Antimicrobial Resistance and Virulence Genes in Salmonella enterica. Front Microbiol 2021;12:777817. [PMID: 34867920 PMCID: PMC8640207 DOI: 10.3389/fmicb.2021.777817] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Accepted: 10/19/2021] [Indexed: 11/13/2022]  Open
14
Li IC, Wu HH, Chen ZW, Chou CH. Prevalence of IncFIB Plasmids Found among Salmonella enterica Serovar Schwarzengrund Isolates from Animal Sources in Taiwan Using Whole-Genome Sequencing. Pathogens 2021;10:pathogens10081024. [PMID: 34451486 PMCID: PMC8399590 DOI: 10.3390/pathogens10081024] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2021] [Revised: 08/12/2021] [Accepted: 08/12/2021] [Indexed: 11/22/2022]  Open
15
Special Issue "Salmonella: Pathogenesis and Host Restriction". Microorganisms 2021;9:microorganisms9020325. [PMID: 33562634 PMCID: PMC7915497 DOI: 10.3390/microorganisms9020325] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 01/13/2021] [Accepted: 02/03/2021] [Indexed: 12/23/2022]  Open
16
Jibril AH, Okeke IN, Dalsgaard A, Menéndez VG, Olsen JE. Genomic Analysis of Antimicrobial Resistance and Resistance Plasmids in Salmonella Serovars from Poultry in Nigeria. Antibiotics (Basel) 2021;10:99. [PMID: 33498344 PMCID: PMC7909428 DOI: 10.3390/antibiotics10020099] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2020] [Revised: 01/06/2021] [Accepted: 01/19/2021] [Indexed: 12/31/2022]  Open
17
Chen H, Song J, Zeng X, Chen D, Chen R, Qiu C, Zhou K. National Prevalence of Salmonella enterica Serotype Kentucky ST198 with High-Level Resistance to Ciprofloxacin and Extended-Spectrum Cephalosporins in China, 2013 to 2017. mSystems 2021;6:e00935-20. [PMID: 33436512 PMCID: PMC7901479 DOI: 10.1128/msystems.00935-20] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Accepted: 12/14/2020] [Indexed: 12/22/2022]  Open
18
Sánchez-Romero MA, Mérida-Floriano Á, Casadesús J. Copy Number Heterogeneity in the Virulence Plasmid of Salmonella enterica. Front Microbiol 2020;11:599931. [PMID: 33343541 PMCID: PMC7746676 DOI: 10.3389/fmicb.2020.599931] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Accepted: 11/18/2020] [Indexed: 12/15/2022]  Open
19
Park CJ, Li J, Zhang X, Gao F, Benton CS, Andam CP. Diverse lineages of multidrug resistant clinical Salmonella enterica and a cryptic outbreak in New Hampshire, USA revealed from a year-long genomic surveillance. INFECTION GENETICS AND EVOLUTION 2020;87:104645. [PMID: 33246085 DOI: 10.1016/j.meegid.2020.104645] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 11/11/2020] [Accepted: 11/22/2020] [Indexed: 01/02/2023]
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