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Muigano MN, Mauti GO, Anami SE, Onguso JM. Advances and challenges in polyhydroxyalkanoates (PHA) production using Halomonas species: A review. Int J Biol Macromol 2025; 309:142850. [PMID: 40188920 DOI: 10.1016/j.ijbiomac.2025.142850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2024] [Revised: 02/24/2025] [Accepted: 04/03/2025] [Indexed: 05/10/2025]
Abstract
Plastic waste pollution is one of the major threats to sustainable development. Biodegradable polymers and biopolymers such as polyhydroxyalkanoates (PHAs) offer suitable alternatives for replacing synthetic plastics. PHAs are produced by diverse bacteria species and archaea as storage compounds for utilization as carbon and energy sources. Halomonas species have emerged as attractive microbial cell factories for biosynthesis of PHAs due to their metabolic versality, ability to valorize diverse feedstock materials, and tolerance to high salinity and pH that allows fermentation in contamination-resistant conditions. In recent years, there has been great attention to the use of Halomonas species in PHA biosynthesis and genetic engineering efforts for enhanced production. This article provides a discussion of the current state of knowledge on production of polyhydroxyalkanoates by Halomonas species. It includes an overview of PHA biosynthesis mechanisms, fermentation strategies, production with cheap substrates, exploitation of open and unsterile conditions, co-production of PHAs and other products, and advances genetic engineering efforts.
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Affiliation(s)
- Martin N Muigano
- Institute for Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya.
| | | | - Sylvester E Anami
- Institute for Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya
| | - Justus M Onguso
- Institute for Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya
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2
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Bolla M, Pettinato M, Ferrari PF, Fabiano B, Perego P. Polyhydroxyalkanoates production from laboratory to industrial scale: A review. Int J Biol Macromol 2025; 310:143255. [PMID: 40250686 DOI: 10.1016/j.ijbiomac.2025.143255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2025] [Revised: 04/06/2025] [Accepted: 04/15/2025] [Indexed: 04/20/2025]
Abstract
Environmental issues related to fossil-based plastics are getting the attention of the media and legislative authorities, addressing the need to improve the plastics' design, collection, and circular economy. In this regard, polyhydroxyalkanoates (PHAs) represent a promising alternative to the conventional polymers, given their biological origin, biodegradability, and biocompatibility. To date, their commercialization covers only a little percentage of the biodegradable plastic application, mainly due to their high cost. However, new production strategies are being investigated and patented, enhancing the PHA market competitiveness. This review tries to fill the gap about the critical investigation on innovative and up-to-date process strategies in PHA production field, deeply evaluating them from a plant-engineering point of view. Several aspects are considered regarding the reduction of the production costs and the increase in the overall PHA productivity and recovery. Among them, the feeding of pre-treated carbon sources derived from food and agro-industrial wastes, the use of mixed microbial cultures as convenient substitutes to the pure ones, and optimized downstream processes are widely discussed. The overlook of the topic is completed by evaluating the innovative technologies existing at pilot and industrial scale, able to achieve improved production yields. Finally, PHA economic and market current conditions are investigated.
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Affiliation(s)
- Maria Bolla
- Department of Civil, Chemical and Environmental Engineering, University of Genoa, via Opera Pia, 15, 16145 Genoa, Italy.
| | - Margherita Pettinato
- Department of Civil, Chemical and Environmental Engineering, University of Genoa, via Opera Pia, 15, 16145 Genoa, Italy; Research Center for Biologically Inspired Engineering in Vascular Medicine and Longevity, University of Genoa, via Montallegro, 1, 16145 Genoa, Italy.
| | - Pier Francesco Ferrari
- Department of Civil, Chemical and Environmental Engineering, University of Genoa, via Opera Pia, 15, 16145 Genoa, Italy; Research Center for Biologically Inspired Engineering in Vascular Medicine and Longevity, University of Genoa, via Montallegro, 1, 16145 Genoa, Italy; IRCCS Ospedale Policlinico San Martino, largo Rosanna Benzi, 10, 16132, Genoa, Italy.
| | - Bruno Fabiano
- Department of Civil, Chemical and Environmental Engineering, University of Genoa, via Opera Pia, 15, 16145 Genoa, Italy; Research Center for Biologically Inspired Engineering in Vascular Medicine and Longevity, University of Genoa, via Montallegro, 1, 16145 Genoa, Italy.
| | - Patrizia Perego
- Department of Civil, Chemical and Environmental Engineering, University of Genoa, via Opera Pia, 15, 16145 Genoa, Italy; Research Center for Biologically Inspired Engineering in Vascular Medicine and Longevity, University of Genoa, via Montallegro, 1, 16145 Genoa, Italy; IRCCS Ospedale Policlinico San Martino, largo Rosanna Benzi, 10, 16132, Genoa, Italy.
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3
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Jiang T, Tan T, Zong Z, Fan D, Wang J, Qiu Y, Teng X, Zhang HM, Rao C. Enhancing oil feedstock utilization for high-yield low-carbon polyhydroxyalkanoates industrial bioproduction. Metab Eng 2025; 91:44-58. [PMID: 40188935 DOI: 10.1016/j.ymben.2025.04.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2025] [Revised: 04/03/2025] [Accepted: 04/04/2025] [Indexed: 04/11/2025]
Abstract
Polyhydroxyalkanoates (PHAs) are biodegradable and environmentally sustainable alternatives to conventional plastics, yet their adoption has been hindered by the high production costs and scalability challenges. This study employed unbiased genomics approaches to engineer Cupriavidus necator H16, an industrial strain with intrinsic capabilities for PHA biosynthesis, for enhanced utilization of oil-based feedstocks, including food-grade palm oil and crude waste cooking oil. The engineered strain demonstrated significant improvements in PHA production, achieving a 264 g/L yield (25.4 % increase) and a 100 g/g conversion rate of palm oil (12 % increase) in 60-h fed-batch fermentation at 150 m3 production scale, the highest yield and conversion rate using food-grade palm oil as carbon source reported to the best of our knowledge. Notably, the carbon footprint of PHA production was reduced by 29.7 % using the engineered strain, and could be further reduced by adopting waste cooking oil. Mechanistic studies revealed that the H16_A3043/H16_A3044 two-component system plays a central role in regulating stress response and biogenesis, the deletion of which unlocked the regulatory constraint and enhanced oil feedstock consumption. This mutation, supplemented with the necessary lipase engineering as revealed during the scale-up troubleshooting, confered higher PHA production in a robust fermentation process scalable through 0.5 L, 200 L, 15 m3 and 150 m3. Additionally, the engineered strain demonstrated efficient utilization of waste cooking oil for PHA production. This study bridges laboratory-scale advancements and industrial feasibility, demonstrating a scalable, sustainable, and economically viable pathway for biopolymer production, contributing to the global shift toward a circular bioeconomy.
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Affiliation(s)
| | | | - Zhiyuan Zong
- Department of Engineering Science, University of Oxford, Oxford, OX1 3PJ, UK
| | | | | | | | - Xin Teng
- Bluepha Co. Ltd., Shanghai, China.
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4
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Jang JW, Hwang IY, Lee OK, Lee EY. Production of polyhydroxybutyrate with high cell density cultivation using thermophile Caldimonas thermodepolymerans. BIORESOURCE TECHNOLOGY 2025; 419:132073. [PMID: 39814147 DOI: 10.1016/j.biortech.2025.132073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2024] [Revised: 12/17/2024] [Accepted: 01/12/2025] [Indexed: 01/18/2025]
Abstract
This study investigates the production of polyhydroxybutyrate (PHB) using the thermophilic bacterium Caldimonas thermodepolymerans in fed-batch fermentation. This research highlights the potential of thermophilic bacteria in biopolymer production due to their ability to operate at high temperatures, which reduces contamination risks and enhances energy efficiency. Optimal fermentation conditions were identified at a temperature of 50 °C, with the strain achieving a maximum specific growth rate (μmax) of 0.57 h-1 and high biomass concentration of 63.1 gCDW/L. PHB production reached a peak concentration of 31.9 g/L with a productivity of 1.30 gPHB/L/h. The high cell density approach in fed-batch fermentation not only maximizes the productivity and yield of PHB, but also optimizes the production process, making it more suitable for industrial-scale applications. The findings highlight the potential of thermophilic bacteria as a sustainable solution for enhancing PHB production and advancing biodegradable polymer synthesis.
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Affiliation(s)
- Jun Won Jang
- Department of Chemical Engineering (BK21 FOUR Integrated Engineering Program) College of Engineering Kyung Hee University Republic of Korea
| | - In Yeub Hwang
- Department of Chemical Engineering (BK21 FOUR Integrated Engineering Program) College of Engineering Kyung Hee University Republic of Korea
| | - Ok Kyung Lee
- Department of Chemical Engineering (BK21 FOUR Integrated Engineering Program) College of Engineering Kyung Hee University Republic of Korea
| | - Eun Yeol Lee
- Department of Chemical Engineering (BK21 FOUR Integrated Engineering Program) College of Engineering Kyung Hee University Republic of Korea.
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5
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Lim SW, Kansedo J, Tan IS, Nandong J, Tan YH, Lam MK, Ongkudon CM. One-pot polyhydroxyalkanoate (PHA) production from Cerbera odollam (sea mango) oil using Pseudomonas resinovorans: Optimal fermentation design and mechanism. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2025; 376:124394. [PMID: 39921954 DOI: 10.1016/j.jenvman.2025.124394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2024] [Revised: 01/08/2025] [Accepted: 01/29/2025] [Indexed: 02/10/2025]
Abstract
With growing environmental concerns over plastic pollution, polyhydroxyalkanoates (PHAs) have recently gained significant attention as promising biodegradable polymers to substitute petroleum-based plastics. In this work, non-edible Cerbera odollam oil was employed as a renewable carbon source for PHA production to improve the economic competitiveness and environmental sustainability of the process. The optimization and mechanism of PHA production from C. odollam oil using Pseudomonas resinovorans DSM 21078 were presented. Through response surface methodology, the optimal condition for PHA production was 0.3 g/L urea concentration, 17.52 g/L oil concentration, and 10.46% (v/v) inoculum size. Results showed that a maximum PHA concentration of 0.50 g/L (with a polymer content of 26.0%) was attained at this optimal condition. The product was composed of 1.3% 3-hydroxybutyrate (3HB), 9.2% 3-hydroxyhexanoate (3HHx), 43.3% 3-hydroxyoctanoate (3HO), 32.0% 3-hydroxydecanoate (3HD), 11.9% 3-hydroxydodecanoate (3HDD), and 2.2% 3-hydroxytetradecanoate (3HTD). The PHA polymers exhibited adhesive, soft, and amorphous properties at room temperature, with high thermal stability, making them desirable for polymer processing. From the mechanism proposed, it was inferred that P. resinovorans DSM 21078 produces longer-chain PHA monomers mainly through the direct β-oxidation of long-chain fatty acids and shorter-chain monomers via the de novo fatty acid synthesis pathway when oil-based substrates are utilized. The findings from this work could pave the way for new paradigms that significantly enhance future research in the development of highly efficient oil resource valorization technologies to produce PHAs with intriguing properties, thereby contributing to the commercial success of sustainable bioplastics as an effective environmental management solution.
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Affiliation(s)
- Sook Wei Lim
- Department of Chemical and Energy Engineering, Faculty of Engineering and Science, Curtin University Malaysia, CDT 250, 98009 Miri, Sarawak, Malaysia
| | - Jibrail Kansedo
- Department of Chemical and Energy Engineering, Faculty of Engineering and Science, Curtin University Malaysia, CDT 250, 98009 Miri, Sarawak, Malaysia.
| | - Inn Shi Tan
- Department of Chemical and Energy Engineering, Faculty of Engineering and Science, Curtin University Malaysia, CDT 250, 98009 Miri, Sarawak, Malaysia
| | - Jobrun Nandong
- Department of Chemical and Energy Engineering, Faculty of Engineering and Science, Curtin University Malaysia, CDT 250, 98009 Miri, Sarawak, Malaysia
| | - Yie Hua Tan
- Petroleum and Chemical Engineering, Faculty of Engineering, Universiti Teknologi Brunei, Gadong, BE1410, Brunei Darussalam
| | - Man Kee Lam
- Chemical Engineering Department, Universiti Teknologi Petronas, 32610 Seri Iskandar, Perak, Malaysia
| | - Clarence M Ongkudon
- Bioprocess Engineering Research Group, Biotechnology Research Institute, Universiti Malaysia Sabah, 88400 Kota Kinabalu, Sabah, Malaysia
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Elazzazy AM, Ali Abd K, Bataweel NM, Mahmoud MM, Baghdadi AM. Microbial Biosynthesis of Medium-Chain-Length Polyhydroxyalkanoate (mcl-PHA) from Waste Cooking Oil. Polymers (Basel) 2024; 16:2150. [PMID: 39125176 PMCID: PMC11314287 DOI: 10.3390/polym16152150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2024] [Revised: 07/19/2024] [Accepted: 07/19/2024] [Indexed: 08/12/2024] Open
Abstract
Waste cooking oil is a common byproduct in the culinary industry, often posing disposal challenges. This study explores its conversion into the valuable bioplastic material, medium-chain-length polyhydroxyalkanoate (mcl-PHA), through microbial biosynthesis in controlled bioreactor conditions. Twenty-four bacterial isolates were obtained from oil-contaminated soil and waste materials in Mahd Ad-Dahab, Saudi Arabia. The best PHA-producing isolates were identified via 16S rDNA analysis as Neobacillus niacini and Metabacillus niabensis, with the sequences deposited in GenBank (accession numbers: PP346270 and PP346271). This study evaluated the effects of various carbon and nitrogen sources, as well as environmental factors, such as pH, temperature, and shaking speed, on the PHA production titer. Neobacillus niacini favored waste cooking oil and yeast extract, achieving a PHA production titer of 1.13 g/L, while Metabacillus niabensis preferred waste olive oil and urea, with a PHA production titer of 0.85 g/L. Both strains exhibited optimal growth at a neutral pH of 7, under optimal shaking -flask conditions. The bioreactor performance showed improved PHA production under controlled pH conditions, with a final titer of 9.75 g/L for Neobacillus niacini and 4.78 g/L for Metabacillus niabensis. Fourier transform infrared (FT-IR) spectroscopy and gas chromatography-mass spectrometry (GC-MS) confirmed the biosynthesized polymer as mcl-PHA. This research not only offers a sustainable method for transforming waste into valuable materials, but also provides insights into the optimal conditions for microbial PHA production, advancing environmental science and materials engineering.
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Affiliation(s)
- Ahmed M. Elazzazy
- Department of Biological Sciences, College of Science, University of Jeddah, P.O. Box 80327, Jeddah 21589, Saudi Arabia; (K.A.A.); (A.M.B.)
| | - Khawater Ali Abd
- Department of Biological Sciences, College of Science, University of Jeddah, P.O. Box 80327, Jeddah 21589, Saudi Arabia; (K.A.A.); (A.M.B.)
| | - Noor M. Bataweel
- King Fahad Medical Research Centre, King Abdulaziz University, Jeddah 21589, Saudi Arabia; (N.M.B.); (M.M.M.)
| | - Maged M. Mahmoud
- King Fahad Medical Research Centre, King Abdulaziz University, Jeddah 21589, Saudi Arabia; (N.M.B.); (M.M.M.)
- Department of Medical Laboratory Sciences, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Afra M. Baghdadi
- Department of Biological Sciences, College of Science, University of Jeddah, P.O. Box 80327, Jeddah 21589, Saudi Arabia; (K.A.A.); (A.M.B.)
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Arai T, Aikawa S, Sudesh K, Arai W, Mohammad Rawi NF, Leh CPP, Mohamad Kassim MH, Tay GS, Kosugi A. Efficient production of polyhydroxybutyrate using lignocellulosic biomass derived from oil palm trunks by the inhibitor-tolerant strain Burkholderia ambifaria E5-3. World J Microbiol Biotechnol 2024; 40:242. [PMID: 38869634 DOI: 10.1007/s11274-024-04041-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Accepted: 05/29/2024] [Indexed: 06/14/2024]
Abstract
Lignocellulosic biomass is a valuable, renewable substrate for the synthesis of polyhydroxybutyrate (PHB), an ecofriendly biopolymer. In this study, bacterial strain E5-3 was isolated from soil in Japan; it was identified as Burkholderia ambifaria strain E5-3 by 16 S rRNA gene sequencing. The strain showed optimal growth at 37 °C with an initial pH of 9. It demonstrated diverse metabolic ability, processing a broad range of carbon substrates, including xylose, glucose, sucrose, glycerol, cellobiose, and, notably, palm oil. Palm oil induced the highest cellular growth, with a PHB content of 65% wt. The strain exhibited inherent tolerance to potential fermentation inhibitors derived from lignocellulosic hydrolysate, withstanding 3 g/L 5-hydroxymethylfurfural and 1.25 g/L acetic acid. Employing a fed-batch fermentation strategy with a combination of glucose, xylose, and cellobiose resulted in PHB production 2.7-times that in traditional batch fermentation. The use of oil palm trunk hydrolysate, without inhibitor pretreatment, in a fed-batch fermentation setup led to significant cell growth with a PHB content of 45% wt, equivalent to 10 g/L. The physicochemical attributes of xylose-derived PHB produced by strain E5-3 included a molecular weight of 722 kDa, a number-average molecular weight of 191 kDa, and a polydispersity index of 3.78. The amorphous structure of this PHB displayed a glass transition temperature of 4.59 °C, while its crystalline counterpart had a melting point of 171.03 °C. This research highlights the potential of lignocellulosic feedstocks, especially oil palm trunk hydrolysate, for PHB production through fed-batch fermentation by B. ambifaria strain E5-3, which has high inhibitor tolerance.
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Affiliation(s)
- Takamitsu Arai
- Japan International Research Center for Agricultural Sciences, 1-1, Ohwashi, Tsukuba, Ibaraki, 305-8686, Japan.
| | - Shimpei Aikawa
- Japan International Research Center for Agricultural Sciences, 1-1, Ohwashi, Tsukuba, Ibaraki, 305-8686, Japan
| | - Kumar Sudesh
- School of Biological Sciences, Universiti Sains Malaysia, Penang, 11800, Malaysia
| | - Wichittra Arai
- Japan International Research Center for Agricultural Sciences, 1-1, Ohwashi, Tsukuba, Ibaraki, 305-8686, Japan
- The National Institute of Advanced Industrial Science and Technology, 1-1-1 Umezono, Tsukuba, Ibaraki, 305-8560, Japan
| | | | - Cheu Peng Peng Leh
- School of Industrial Technology, Universiti Sains Malaysia, Penang, 11800, Malaysia
| | | | - Guan Seng Tay
- School of Industrial Technology, Universiti Sains Malaysia, Penang, 11800, Malaysia
| | - Akihiko Kosugi
- Japan International Research Center for Agricultural Sciences, 1-1, Ohwashi, Tsukuba, Ibaraki, 305-8686, Japan
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Medeiros Garcia Alcântara J, Iannacci F, Morbidelli M, Sponchioni M. Soft sensor based on Raman spectroscopy for the in-line monitoring of metabolites and polymer quality in the biomanufacturing of polyhydroxyalkanoates. J Biotechnol 2023; 377:23-33. [PMID: 37879569 DOI: 10.1016/j.jbiotec.2023.10.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2023] [Revised: 10/04/2023] [Accepted: 10/16/2023] [Indexed: 10/27/2023]
Abstract
Polyhydroxyalkanoates (PHA) are among the most promising bio-based alternatives to conventional petroleum-based plastics. These biodegradable polyesters can in fact be produced by fermentation from bacteria like Cupriavidus necator, thus reducing the environmental footprint of the manufacturing process. However, ensuring consistent product quality attributes is a major challenge of biomanufacturing. To address this issue, the implementation of real-time monitoring tools is essential to increase process understanding, enable a prompt response to possible process deviations and realize on-line process optimization. In this work, a soft sensor based on in situ Raman spectroscopy was developed and applied to the in-line monitoring of PHA biomanufacturing. This strategy allows the collection of quantitative information directly from the culture broth, without the need for sampling, and at high frequency. In fact, through an optimized multivariate data analysis pipeline, this soft sensor allows monitoring cell dry weight, as well as carbon and nitrogen source concentrations with root mean squared errors (RMSE) equal to 3.71, 7 and 0.03 g/L, respectively. In addition, this tool allows the in-line monitoring of intracellular PHA accumulation, with an RMSE of 14 gPHA/gCells. For the first time, also the number and weight average molecular weights of the polymer produced could be monitored, with RMSE of 8.7E4 and 11.6E4 g/mol, respectively. Overall, this work demonstrates the potential of Raman spectroscopy in the in-line monitoring of biotechnology processes, leading to the simultaneous measurement of several process variables in real time without the need of sampling and labor-intensive sample preparations.
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Affiliation(s)
- João Medeiros Garcia Alcântara
- Dept. of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, via Mancinelli 7, Milano 20131, Italy
| | - Francesco Iannacci
- Dept. of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, via Mancinelli 7, Milano 20131, Italy
| | - Massimo Morbidelli
- Dept. of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, via Mancinelli 7, Milano 20131, Italy
| | - Mattia Sponchioni
- Dept. of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, via Mancinelli 7, Milano 20131, Italy.
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Rodríguez Y, García S, Lebrero R, Muñoz R. Continuous polyhydroxybutyrate production from biogas in an innovative two-stage bioreactor configuration. Biotechnol Bioeng 2023; 120:3224-3233. [PMID: 37497590 DOI: 10.1002/bit.28507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Revised: 04/20/2023] [Accepted: 07/11/2023] [Indexed: 07/28/2023]
Abstract
Biogas biorefineries have opened up new horizons beyond heat and electricity production in the anaerobic digestion sector. Added-value products such as polyhydroxyalkanoates (PHAs), which are environmentally benign and potential candidates to replace conventional plastics, can be generated from biogas. This work investigated the potential of an innovative two-stage growth-accumulation system for the continuous production of biogas-based polyhydroxybutyrate (PHB) using Methylocystis hirsuta CSC1 as cell factory. The system comprised two turbulent bioreactors in series to enhance methane and oxygen mass transfer: a continuous stirred tank reactor (CSTR) and a bubble column bioreactor (BCB) with internal gas recirculation. The CSTR was devoted to methanotrophic growth under nitrogen balanced growth conditions and the BCB targeted PHB production under nitrogen limiting conditions. Two different operational approaches under different nitrogen loading rates and dilution rates were investigated. A balanced nitrogen loading rate along with a dilution rate (D) of 0.3 day-1 resulted in the most stable operating conditions and a PHB productivity of ~53 g PHB m-3 day-1 . However, higher PHB productivities (~127 g PHB m-3 day-1 ) were achieved using nitrogen excess at a D = 0.2 day-1 . Overall, the high PHB contents (up to 48% w/w) obtained in the CSTR under theoretically nutrient balanced conditions and the poor process stability challenged the hypothetical advantages conferred by multistage vs single-stage process configurations for long-term PHB production.
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Affiliation(s)
- Yadira Rodríguez
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Valladolid, Spain
- Institute of Sustainable Processes, Valladolid, Spain
| | - Silvia García
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Valladolid, Spain
- Institute of Sustainable Processes, Valladolid, Spain
| | - Raquel Lebrero
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Valladolid, Spain
- Institute of Sustainable Processes, Valladolid, Spain
| | - Raúl Muñoz
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Valladolid, Spain
- Institute of Sustainable Processes, Valladolid, Spain
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Zacharopoulos I, Theodoropoulos C. Continuous production of succinic acid from glycerol: A complete experimental and computational study. BIORESOURCE TECHNOLOGY 2023; 386:129518. [PMID: 37481041 DOI: 10.1016/j.biortech.2023.129518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 07/15/2023] [Accepted: 07/16/2023] [Indexed: 07/24/2023]
Abstract
In this work, a bioprocess for the fermentation of A. succinogenes for the production of succinic acid from glycerol was developed, employing a continuous bioreactor with recycle. Moreover, a new bioprocess model was constructed, based on an existing double substrate limitation model, which was validated with experimental results for a range of operating parameters. The model was used to successfully predict the dynamics of the continuous fermentation process and was subsequently employed in optimisation studies to compute the optimal conditions, dilution rate, reflux rate and feed glycerol concentration, that maximise the productivity of bio-succinic acid. In addition, a Pareto front for optimal volumetric productivity and glycerol conversion combinations was computed. Maximum volumetric productivity of 0.518 g/L/h, was achieved at the optimal computed conditions, which were experimentally validated. This is the highest bio-succinic acid productivity reported so far, for such a continuous bioprocess.
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Affiliation(s)
- Ioannis Zacharopoulos
- Department of Chemical Engineering, Biochemical and Bioprocess Engineering Group, The University of Manchester, Manchester M13 9PL, UK
| | - Constantinos Theodoropoulos
- Department of Chemical Engineering, Biochemical and Bioprocess Engineering Group, The University of Manchester, Manchester M13 9PL, UK.
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Esmael ME, Ibrahim MIA, Aldhumri SA, Bayoumi RA, Matsuo K, Khattab AM. Lipid-membranes interaction, structural assessment, and sustainable production of polyhydroxyalkanoate by Priestia filamentosa AZU-A6 from sugarcane molasses. Int J Biol Macromol 2023; 242:124721. [PMID: 37150380 DOI: 10.1016/j.ijbiomac.2023.124721] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2023] [Revised: 04/19/2023] [Accepted: 04/30/2023] [Indexed: 05/09/2023]
Abstract
This study presented for the first time the PHA-lipid interactions by circular dichroism (CD) spectroscopy, besides a sustainable PHA production strategy using a cost-effective microbial isolate. About 48 bacterial isolates were selected from multifarious Egyptian sites and screened for PHAs production. The Fe(AZU-A6) was the most potent isolate, and identified genetically as Priestia filamentosa AZU-A6, while the intracellular PHA granules were visualized by TEM. Sugarcane molasses (SCM) was used an inexpensive carbon source and the production conditions were optimized through a Factor-By-Factor strategy and a Plackett-Burman statistical model. The highest production (6.84 g L-1) was achieved at 8.0 % SCM, pH 8.0, 35 °C, 250 rpm, and 0.5 g L-1 ammonium chloride after 72 h. The complementary physicochemical techniques (e.g., FTIR, NMR, GC-MS, DSC, and TGA) have ascertained the structural identity as poly-3-hydroxybutyrate (P3HB) with a characteristic melting temperature of 174.5 °C. The circular dichroism analysis investigated the existence of interactions between the PHB and the different lipids, particularly 1,2-dimyristoyl-sn-glycero-3-phosphocholine. The ATR technique for the lipid-PHB films suggested that both the hydrophobic and electrostatic forces control the lipid-PHB interactions that might induce changes in the structuration of PHB.
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Affiliation(s)
- Mahmoud E Esmael
- Al-Azhar Center for Fermentation Biotechnology and Applied Microbiology, Al-Azhar University, Nasr City, Cairo 11884, Egypt
| | - Mohamed I A Ibrahim
- Hiroshima Synchrotron Radiation Center, Hiroshima University, 2-313 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-0046, Japan; National Institute of Oceanography and Fisheries, NIOF, Egypt.
| | - Sami A Aldhumri
- Department of Biology, Alkhormah University College, Taif University, Taif 21974, Saudi Arabia
| | - Reda A Bayoumi
- Department of Biology, Alkhormah University College, Taif University, Taif 21974, Saudi Arabia; Botany and Microbiology Department, Faculty of Science, Al-Azhar University, Nasr City, Cairo 11884, Egypt
| | - Koichi Matsuo
- Hiroshima Synchrotron Radiation Center, Hiroshima University, 2-313 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-0046, Japan
| | - Abdelrahman M Khattab
- Botany and Microbiology Department, Faculty of Science, Al-Azhar University, Nasr City, Cairo 11884, Egypt.
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12
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Alaux E, Marie B, Couvreur M, Bounouba M, Hernandez-Raquet G. Impact of phosphorus limitation on medium-chain-length polyhydroxyalkanoate production by activated sludge. Appl Microbiol Biotechnol 2023; 107:3509-3522. [PMID: 37133798 DOI: 10.1007/s00253-023-12528-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 03/31/2023] [Accepted: 04/10/2023] [Indexed: 05/04/2023]
Abstract
For a sustainable economy, biodegradable biopolymers polyhydroxyalkanoates (PHA) are desirable substitutes to petroleum-based plastics that contaminate our environment. Medium-chain-length (MCL) PHA bioplastics are particularly interesting due to their thermoplastic properties. To hamper the high cost associated to PHA production, the use of bacterial mixed cultures cultivated in open systems and using cheap resources is a promising strategy. Here, we studied the operating conditions favouring direct MCL accumulation by activated sludge, using oleic acid as a model substrate and phosphorus limitation in fed-batch bioreactors. Our results confirm the presence of PHA-accumulating organisms (PHAAO) in activated sludge able to accumulate MCL from oleic acid. A positive correlation between phosphorus (P) limitation and PHA accumulation was demonstrated, allowing up to 26% PHA/total biomass accumulation, and highlighted its negative impact on the MCL/PHA fraction in the polymer. Diversity analysis through 16S rRNA amplicon sequencing revealed a differential selection of PHAAO according to the P-limitation level. A differential behaviour for the orders Pseudomonadales and Burkholderiales at increasing P-limitation levels was revealed, with a higher abundance of the latter at high levels of P-limitation. The PHA accumulation observed in activated sludge open new perspectives for MCL-PHA production system based on P-limitation strategy applied to mixed microbial communities. KEY POINTS: • Direct accumulation of MCL-PHA in activated sludge was demonstrated. • MCL-PHA content is negatively correlated with P-limitation. • Burkholderiales members discriminate the highest P-limitation levels.
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Affiliation(s)
- Emilie Alaux
- Toulouse Biotechnology Institute - TBI, Université de Toulouse, UMR5504, UMR792, CNRS, INRAE, INSA, 135 avenue de Rangueil, 31077 cedex 04, Toulouse, France
| | - Bastien Marie
- Toulouse Biotechnology Institute - TBI, Université de Toulouse, UMR5504, UMR792, CNRS, INRAE, INSA, 135 avenue de Rangueil, 31077 cedex 04, Toulouse, France
| | - Marion Couvreur
- Toulouse Biotechnology Institute - TBI, Université de Toulouse, UMR5504, UMR792, CNRS, INRAE, INSA, 135 avenue de Rangueil, 31077 cedex 04, Toulouse, France
| | - Mansour Bounouba
- Toulouse Biotechnology Institute - TBI, Université de Toulouse, UMR5504, UMR792, CNRS, INRAE, INSA, 135 avenue de Rangueil, 31077 cedex 04, Toulouse, France
| | - Guillermina Hernandez-Raquet
- Toulouse Biotechnology Institute - TBI, Université de Toulouse, UMR5504, UMR792, CNRS, INRAE, INSA, 135 avenue de Rangueil, 31077 cedex 04, Toulouse, France.
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13
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Pouresmaeil M, Azizi-Dargahlou S. Factors involved in heterologous expression of proteins in E. coli host. Arch Microbiol 2023; 205:212. [PMID: 37120438 PMCID: PMC10148705 DOI: 10.1007/s00203-023-03541-9] [Citation(s) in RCA: 30] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 03/26/2023] [Accepted: 04/05/2023] [Indexed: 05/01/2023]
Abstract
The production of recombinant proteins is one of the most significant achievements of biotechnology in the last century. These proteins are produced in the eukaryotic or prokaryotic heterologous hosts. By increasing the omics data especially related to different heterologous hosts as well as the presence of new amenable genetic engineering tools, we can artificially engineer heterologous hosts to produce recombinant proteins in sufficient quantities. Numerous recombinant proteins have been produced and applied in various industries, and the global recombinant proteins market size is expected to be cast to reach USD 2.4 billion by 2027. Therefore, identifying the weakness and strengths of heterologous hosts is critical to optimize the large-scale biosynthesis of recombinant proteins. E. coli is one of the popular hosts to produce recombinant proteins. Scientists reported some bottlenecks in this host, and due to the increasing demand for the production of recombinant proteins, there is an urgent need to improve this host. In this review, we first provide general information about the E. coli host and compare it with other hosts. In the next step, we describe the factors involved in the expression of the recombinant proteins in E. coli. Successful expression of recombinant proteins in E. coli requires a complete elucidation of these factors. Here, the characteristics of each factor will be fully described, and this information can help to improve the heterologous expression of recombinant proteins in E. coli.
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Affiliation(s)
- Mahin Pouresmaeil
- Agricultural Biotechnology, Department of Biotechnology, Azarbaijan Shahid Madani University, Tabriz, Iran
| | - Shahnam Azizi-Dargahlou
- Agricultural Biotechnology, Department of Biotechnology, Azarbaijan Shahid Madani University, Tabriz, Iran.
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14
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Piecha CR, Alves TC, Zanini MLDO, Corrêa CDPL, Leite FPL, Galli V, Diaz PS. Application of the solid-state fermentation process and its variations in PHA production: a review. Arch Microbiol 2022; 205:11. [PMID: 36460824 DOI: 10.1007/s00203-022-03336-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Revised: 10/25/2022] [Accepted: 11/14/2022] [Indexed: 12/04/2022]
Abstract
Solid-state fermentation (SSF) is a type of fermentation process with potential to use agro-industrial by-products as a carbon source. Nonetheless, there are few studies evaluating SSF compared to submerged fermentation (SmF) to produce polyhydroxyalkanoates (PHAs). Different methodologies are available associating the two processes. In general, the studies employ a 1st step by SSF to hydrolyze the agro-industrial by-products used as a carbon source, and a 2nd step to produce PHA that can be carried out by SmF or SSF. This paper reviewed and compared the different methodologies described in the literature to assess their potential for use in PHA production. The studies evaluated showed that highest PHA yields (86.2% and 82.3%) were achieved by associating SSF and SmF by Cupriavidus necator. Meanwhile, in methodologies using only SSF, Bacillus produced the highest yields (62% and 56.8%). Since PHA (%) does not necessarily represent a higher production by biomass, the productivity parameter was also compared between studies. We observed that the highest productivity results did not necessarily represent the highest PHA (%). C. necator presented the highest PHA yields associating SSF and SmF, however, is not the most suitable microorganism for PHA production by SSF. Concomitant use of C. necator and Bacillus is suggested for future studies in SSF. Also, it discusses the lack of studies on the association of the two fermentation methodologies, and on the scaling of SSF process for PHA production. In addition to demonstrating the need for standardization of results, for comparison between different methodologies.
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Affiliation(s)
- Camila Rios Piecha
- Bioprocess Technology Laboratory, Biotechnology, Technological Development Center, Federal University of Pelotas, RS, Zip Code 96010-90, Pelotas, Brazil.
| | - Taisha Carvalho Alves
- Center for Chemical, Pharmaceutical and Food Science, Federal University of Pelotas, Pelotas, RS, Brazil
| | - Maria Luiza de Oliveira Zanini
- Bioprocess Technology Laboratory, Biotechnology, Technological Development Center, Federal University of Pelotas, RS, Zip Code 96010-90, Pelotas, Brazil
| | - Caroline de Paula Lopes Corrêa
- Bioprocess Technology Laboratory, Biotechnology, Technological Development Center, Federal University of Pelotas, RS, Zip Code 96010-90, Pelotas, Brazil
| | - Fábio Pereira Leivas Leite
- Bioprocess Technology Laboratory, Biotechnology, Technological Development Center, Federal University of Pelotas, RS, Zip Code 96010-90, Pelotas, Brazil
| | - Vanessa Galli
- Bioprocess Technology Laboratory, Biotechnology, Technological Development Center, Federal University of Pelotas, RS, Zip Code 96010-90, Pelotas, Brazil
| | - Patrícia Silva Diaz
- Bioprocess Technology Laboratory, Biotechnology, Technological Development Center, Federal University of Pelotas, RS, Zip Code 96010-90, Pelotas, Brazil
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15
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Optimized cell growth and poly(3-hydroxybutyrate) synthesis from saponified spent coffee grounds oil. Appl Microbiol Biotechnol 2022; 106:6033-6045. [PMID: 36028634 PMCID: PMC9468064 DOI: 10.1007/s00253-022-12093-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Revised: 07/20/2022] [Accepted: 07/22/2022] [Indexed: 11/04/2022]
Abstract
Abstract
Spent coffee ground (SCG) oil is an ideal substrate for the biosynthesis of polyhydroxyalkanoates (PHAs) by Cupriavidus necator. The immiscibility of lipids with water limits their bioavailability, but this can be resolved by saponifying the oil with potassium hydroxide to form water-soluble fatty acid potassium salts and glycerol. Total saponification was achieved with 0.5 mol/L of KOH at 50 °C for 90 min. The relationship between the initial carbon substrate concentration (C0) and the specific growth rate (µ) of C. necator DSM 545 was evaluated in shake flask cultivations; crude and saponified SCG oils were supplied at matching initial carbon concentrations (C0 = 2.9–23.0 g/L). The Han-Levenspiel model provided the closest fit to the experimental data and accurately described complete growth inhibition at 32.9 g/L (C0 = 19.1 g/L) saponified SCG oil. Peak µ-values of 0.139 h−1 and 0.145 h−1 were obtained with 11.99 g/L crude and 17.40 g/L saponified SCG oil, respectively. Further improvement to biomass production was achieved by mixing the crude and saponified substrates together in a carbon ratio of 75:25% (w/w), respectively. In bioreactors, C. necator initially grew faster on the mixed substrates (µ = 0.35 h−1) than on the crude SCG oil (µ = 0.23 h−1). After harvesting, cells grown on crude SCG oil obtained a total biomass concentration of 7.8 g/L and contained 77.8% (w/w) PHA, whereas cells grown on the mixed substrates produced 8.5 g/L of total biomass and accumulated 84.4% (w/w) of PHA. Key points • The bioavailability of plant oil substrates can be improved via saponification. • Cell growth and inhibition were accurately described by the Han-Levenpsiel model. • Mixing crude and saponified oils enable variation of free fatty acid content.
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16
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DJERRAB L, CHEKROUD Z, ROUABHIA A, DEMS MA, ATTAILIA I, GARCIA LIR, SMADI MA. Potential use of Bacillus paramycoides for the production of the biopolymer polyhydroxybutyrate from leftover carob fruit agro-waste. AIMS Microbiol 2022; 8:318-337. [PMID: 36317006 PMCID: PMC9576499 DOI: 10.3934/microbiol.2022023] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2022] [Revised: 07/15/2022] [Accepted: 07/20/2022] [Indexed: 02/24/2025] Open
Abstract
This study was designed to investigate, at a laboratory scale, the possibility of valorizing the leftover carob fruits to produce the eco-friendly biopolymer polyhydroxybutyrate (PHB) by using the bacterial strain Bacillus paramycoides, which has been isolated from the botanical garden of Skikda University in Algeria. The PHB production was tested under various conditions: a pH of 3-8, temperature range of 30-44 °C, carob extracted molasses concentration of 2-8% v/v, an incubation time of 24-96 h and an agitation speed of 150-300 rpm. The effects of different nitrogen sources and carob extracted molasses treatment types were also investigated. The PHB concentration was determined quantitatively as crotonic acid by measuring the absorbance at 300 nm. Cell growth was quantified by measuring the density of the culture at 600 nm. The presence of PHB was confirmed by applying high-performance liquid chromatography (HPLC) using an Aminex HPX-87H and implementing gas chromatography analysis. The best yield of PHB synthesis was obtained by using 6% v/v of 5 M H2SO4 treated with carob molasses as a carbon source, with peptone as a nitrogen source; incubation was conducted at 37 °C for 96 h at an agitation speed of 300 rpm (114.95 mg/L). The HPLC analysis confirmed the synthesis of PHB by B. paramycoides to have a chromatogram retention time of 22.5 min. Carob waste was successfully valorized to PHB.
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Affiliation(s)
- Leila DJERRAB
- Laboratory of Research on the Physical Chemistry of Surfaces and Interfaces (LRPCSI), University 20 Août 1955 Skikda, Algeria
| | - Zohra CHEKROUD
- Research Laboratory of Interactions, Biodiversity, Ecosystems and Biotechnology (LRIBEB) University 20 Août 1955 Skikda, Algeria
| | - Amer ROUABHIA
- Research Laboratory of Biological Treatment of Residues, Department of Chemical Engineering and Food Technology, Institute of Vitivinicultural and Agri-food Research (IVAGRO), University of Cadiz, Spain
| | - Mohamed Abdesselem DEMS
- Bioinformatics and Biostatistics Unit (BIBSU), National Center for Biotechnology, Constantine, Algeria
| | - Imane ATTAILIA
- Superior School of Food Sciences and Agro Food Industries (ESSAIA), Algiers, Algeria
| | - Luis Isidoro Romero GARCIA
- Director Laboratory of Biological Treatment of Residues, Department of Chemical Engineering and Food Technology University of Cadiz, Spain
| | - Mustapha Adnane SMADI
- Laboratory of Animal Biotechnologies, National Center for Biotechnology, Constantine, Algeria
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17
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Koller M. Advances in Polyhydroxyalkanoate (PHA) Production, Volume 3. Bioengineering (Basel) 2022; 9:bioengineering9070328. [PMID: 35877379 PMCID: PMC9312071 DOI: 10.3390/bioengineering9070328] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Accepted: 07/17/2022] [Indexed: 01/19/2023] Open
Abstract
Steadily increasing R&D activities in the field of microbial polyhydroxyalkanoate (PHA) biopolyesters are committed to growing global threats from climate change, aggravating plastic pollution, and the shortage of fossil resources. These prevailing issues paved the way to launch the third Special Issue of Bioengineering dedicated to future-oriented biomaterials, characterized by their versatile plastic-like properties. Fifteen individual contributions to the Special Issue, written by renowned groups of researchers from all over the world, perfectly mirror the current research directions in the PHA sector: inexpensive feedstock like carbon-rich waste from agriculture, mitigation of CO2 for PHA biosynthesis by cyanobacteria or wild type and engineered “knallgas” bacteria, powerful extremophilic PHA production strains, novel tools for rapid in situ determination of PHA in photobioreactors, modelling of the dynamics of PHA production by mixed microbial cultures from inexpensive raw materials, enhanced bioreactor design for high-throughput PHA production by sophisticated cell retention systems, sustainable and efficient PHA recovery from biomass assisted by supercritical water, enhanced processing of PHA by application of novel antioxidant additives, and the development of compatible biopolymer blends. Moreover, elastomeric medium chain length PHA (mcl-PHA) are covered in-depth, inter alia, by introduction of a novel class of bioactive mcl-PHA-based networks, in addition to the first presentation of the new rubber-like polythioester poly(3-mercapto-2-methylpropionate). Finally, the present Special Issue is concluded by a critical essay on past, ongoing, and announced global endeavors for PHA commercialization.
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Affiliation(s)
- Martin Koller
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstrasse 28/IV, 8010 Graz, Austria; ; Tel.: +43-316-380-5463
- ARENA—Arbeitsgemeinschaft für Ressourcenschonende und Nachhaltige Technologien, Inffeldgasse 21b, 8010 Graz, Austria
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18
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Rodríguez Y, García S, Pérez R, Lebrero R, Muñoz R. Optimization of nitrogen feeding strategies for improving polyhydroxybutyrate production from biogas by Methylocystis parvus str. OBBP in a stirred tank reactor. CHEMOSPHERE 2022; 299:134443. [PMID: 35364084 DOI: 10.1016/j.chemosphere.2022.134443] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 03/07/2022] [Accepted: 03/24/2022] [Indexed: 06/14/2023]
Abstract
The design of efficient cultivation strategies to produce bioplastics from biogas is crucial for the implementation of this biorefinery process. In this work, biogas-based polyhydroxybutyrate (PHB) production and CH4 biodegradation performance was investigated for the first time in a stirred tank bioreactor inoculated with Methylocystis parvus str. OBBP. Decreasing nitrogen loading rates in continuous mode and alternating feast:famine regimes of 24 h-cycles, and alternating feast:famine regimes of 24 h:24 h and 24 h:48 h were tested. Continuous N feeding did not support an effective PHB production despite the occurrence of nitrogen limiting conditions. Feast-famine cycles of 24 h:24 h (with 50% stoichiometric nitrogen supply) supported the maximum PHB production (20 g-PHB m-3 d-1) without compromising the CH4-elimination capacity (25 g m-3 h-1) of the system. Feast:famine ratios ≤1:2 entailed the deterioration of process performance at stoichiometric nitrogen inputs ≤60%.
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Affiliation(s)
- Yadira Rodríguez
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina, s/n, 47011, Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina, s/n, 47011, Valladolid, Spain.
| | - Silvia García
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina, s/n, 47011, Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina, s/n, 47011, Valladolid, Spain.
| | - Rebeca Pérez
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina, s/n, 47011, Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina, s/n, 47011, Valladolid, Spain.
| | - Raquel Lebrero
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina, s/n, 47011, Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina, s/n, 47011, Valladolid, Spain.
| | - Raúl Muñoz
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina, s/n, 47011, Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina, s/n, 47011, Valladolid, Spain.
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19
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Boccalon E, Gorrasi G. Functional bioplastics from food residual: Potentiality and safety issues. Compr Rev Food Sci Food Saf 2022; 21:3177-3204. [PMID: 35768940 DOI: 10.1111/1541-4337.12986] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 04/30/2022] [Accepted: 05/03/2022] [Indexed: 11/26/2022]
Abstract
Plastic pollution and food waste are two global issues with much in common. Plastic containers were introduced as a practical and easy remedy to improve food preservation and reduce the risk of creating waste, but ironically, to address one problem, another has been made worse. The spread of single-use containers has dramatically increased the amount of plastic that has to be discarded, and the most urgent task is now to find a solution to what has become part of the problem. An innovative way around it consists of promoting the valorization of food residues by turning them into novel materials for packaging. Although the results are promising, the aim of completely replacing plastics with biodegradable materials still seems far from being achieved. This review illustrates the main strategies adopted thus far to produce new bioplastic materials and composites from waste resources and focuses on the pros and cons of the food recovery process to look for the aspects that represent an obstacle to the development of the circular food economy on an industrial scale.
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Affiliation(s)
- Elisa Boccalon
- Department of Industrial Engineering, University of Salerno, Salerno, Fisciano, Italy
| | - Giuliana Gorrasi
- Department of Industrial Engineering, University of Salerno, Salerno, Fisciano, Italy
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20
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Influence of emulsified plant oil composition on growth and biopolymer production of Cupriavidus necator DSM 545. FOOD AND BIOPRODUCTS PROCESSING 2022. [DOI: 10.1016/j.fbp.2021.12.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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21
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Parroquin Gonzalez M, Winterburn J. Enhanced biosynthesis of polyhydroxyalkanoates by continuous feeding of volatile fatty acids in Haloferax mediterranei. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2021.108307] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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22
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Xu RZ, Cao JS, Luo JY, Feng Q, Ni BJ, Fang F. Integrating mechanistic and deep learning models for accurately predicting the enrichment of polyhydroxyalkanoates accumulating bacteria in mixed microbial cultures. BIORESOURCE TECHNOLOGY 2022; 344:126276. [PMID: 34742815 DOI: 10.1016/j.biortech.2021.126276] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Revised: 10/28/2021] [Accepted: 10/29/2021] [Indexed: 06/13/2023]
Abstract
The enrichment of polyhydroxyalkanoates (PHA) accumulating bacteria (PAB) in mixed microbial cultures (MMC) is extremely difficult to be predicted and optimized. Here we demonstrate that mechanistic and deep learning models can be integrated innovatively to accurately predict the dynamic enrichment of PAB. Well-calibrated activated sludge models (ASM) of the PAB enrichment process provide time-dependent data under different operating conditions. Recurrent neural network (RNN) models are trained and tested based on the time-dependent dataset generated by ASM. The accurate prediction performance is achieved (R2 > 0.991) for three different PAB enrichment datasets by the optimized RNN model. The optimized RNN model can also predict the equilibrium concentration of PAB (R2 = 0.944) and corresponding time, which represents the end of the PAB enrichment process. This study demonstrates the strength of integrating mechanistic and deep learning models to predict long-term variations of specific microbes, helping to optimize their selection process for PHA production.
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Affiliation(s)
- Run-Ze Xu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China
| | - Jia-Shun Cao
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China
| | - Jing-Yang Luo
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China
| | - Qian Feng
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China
| | - Bing-Jie Ni
- Centre for Technology in Water and Wastewater (CTWW), School of Civil and Environmental Engineering, University of Technology Sydney (UTS), Sydney, NSW 2007, Australia
| | - Fang Fang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China.
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23
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Optimization of Propagation Medium for Enhanced Polyhydroxyalkanoate Production by Pseudomonas oleovorans. FERMENTATION-BASEL 2021. [DOI: 10.3390/fermentation8010016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Polyhydroxyalkanoates (PHAs) represent a promising alternative to commercially used petroleum-based plastics. Pseudomonas oleovorans is a natural producer of medium-chain-length PHA (mcl-PHA) under cultivation conditions with nitrogen limitation and carbon excess. Two-step cultivation appears to be an efficient but more expensive method of PHA production. Therefore, the aim of this work was to prepare a minimal synthetic medium for maximum biomass yield and to optimize selected independent variables by response surface methodology (RSM). The highest biomass yield (1.71 ± 0.04 g/L) was achieved in the optimized medium containing 8.4 g/L glucose, 5.7 g/L sodium ammonium phosphate and 35.4 mM phosphate buffer. Under these conditions, both carbon and nitrogen sources were completely consumed after 48 h of the cultivation and the biomass yield was 1.7-fold higher than in the conventional medium recommended by the literature. This approach demonstrates the possibility of using two-stage PHA cultivation to obtain the maximum amount of biomass and PHA.
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24
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Sousa BV, Silva F, Reis MA, Lourenço ND. Monitoring pilot-scale polyhydroxyalkanoate production from fruit pulp waste using near-infrared spectroscopy. Biochem Eng J 2021. [DOI: 10.1016/j.bej.2021.108210] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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25
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Khomlaem C, Aloui H, Oh WG, Kim BS. High cell density culture of Paracoccus sp. LL1 in membrane bioreactor for enhanced co-production of polyhydroxyalkanoates and astaxanthin. Int J Biol Macromol 2021; 192:289-297. [PMID: 34619282 DOI: 10.1016/j.ijbiomac.2021.09.180] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Revised: 09/12/2021] [Accepted: 09/26/2021] [Indexed: 11/17/2022]
Abstract
A cell retention culture of Paracoccus sp. LL1 was performed in a membrane bioreactor equipped with an internal ceramic filter module to reach high cell density and thus enhance the co-production of polyhydroxyalkanoates (PHA) and astaxanthin as growth-associated products. Cell retention culture results showed that PHA accumulation increased with increasing dry cell weight (DCW), giving rise to a maximum of 113 ± 0.92 g/L of DCW with 43.9 ± 0.91 g/L of PHA (38.8% of DCW) at 48 h. A significant increase in both intracellular and extracellular astaxanthin concentrations was also recorded during fermentation process achieving a maximum of 8.51 ± 0.20 and 10.2 ± 0.24 mg/L, respectively. Amounts of PHA and total astaxanthin produced by cell retention culture were 6.29 and 19.7-folds higher, respectively, than those recorded under batch cultivation. PHA and total astaxanthin productivities by cell retention culture also increased up to 0.914 g/L/h and 0.781 mg/L/h, respectively, which were 3.54 and 11.1-folds higher than those of batch culture. Based on gas chromatography, Fourier transform infrared spectroscopy, and 1H nuclear magnetic resonance spectroscopy, the extracted PHA was identified as a copolymer of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) with a 3-hydroxyvalerate content of 3.78 mol%.
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Affiliation(s)
- Chanin Khomlaem
- Department of Chemical Engineering, Chungbuk National University, Cheongju, Chungbuk 28644, Republic of Korea
| | - Hajer Aloui
- Department of Chemical Engineering, Chungbuk National University, Cheongju, Chungbuk 28644, Republic of Korea
| | - Won-Gyun Oh
- Department of Chemical Engineering, Chungbuk National University, Cheongju, Chungbuk 28644, Republic of Korea
| | - Beom Soo Kim
- Department of Chemical Engineering, Chungbuk National University, Cheongju, Chungbuk 28644, Republic of Korea.
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26
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Schmid MT, Sykacek E, O'Connor K, Omann M, Mundigler N, Neureiter M. Pilot scale production and evaluation of mechanical and thermal properties of P(
3HB
) from
Bacillus megaterium
cultivated on desugarized sugar beet molasses. J Appl Polym Sci 2021. [DOI: 10.1002/app.51503] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Maximilian T. Schmid
- Institute of Environmental Biotechnology University of Natural Resources and Life Sciences Tulln Austria
| | - Eva Sykacek
- Institute of Natural Materials Technology University of Natural Resources and Life Sciences Tulln Austria
| | | | - Markus Omann
- AGRANA Research & Innovation Center GmbH Tulln Austria
| | - Norbert Mundigler
- Institute of Natural Materials Technology University of Natural Resources and Life Sciences Tulln Austria
| | - Markus Neureiter
- Institute of Environmental Biotechnology University of Natural Resources and Life Sciences Tulln Austria
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27
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Muthuraj R, Valerio O, Mekonnen TH. Recent developments in short- and medium-chain- length Polyhydroxyalkanoates: Production, properties, and applications. Int J Biol Macromol 2021; 187:422-440. [PMID: 34324901 DOI: 10.1016/j.ijbiomac.2021.07.143] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 07/12/2021] [Accepted: 07/20/2021] [Indexed: 02/07/2023]
Abstract
Developing renewable resource-based plastics with complete biodegradability and a minimal carbon footprint can open new opportunities to effectively manage the end-of-life plastics waste and achieve a low carbon society. Polyhydroxyalkanoates (PHAs) are biobased and biodegradable thermoplastic polyesters that accumulate in microorganisms (e.g., bacterial, microalgal, and fungal species) as insoluble and inert intracellular inclusion. The PHAs recovery from microorganisms, which typically involves cell lysis, extraction, and purification, provides high molecular weight and purified polyesters that can be compounded and processed using conventional plastics converting equipment. The physio-chemical, thermal, and mechanical properties of the PHAs are comparable to traditional synthetic polymers such as polypropylene and polyethylene. As a result, it has attracted substantial applications interest in packaging, personal care, coatings, agricultural and biomedical uses. However, PHAs have certain performance limitations (e.g. slow crystallization), and substantially more expensive than many other polymers. As such, more research and development is required to enable them for extensive use. This review provides a critical review of the recent progress achieved in PHAs production using different microorganisms, downstream processing, material properties, processing avenues, recycling, aerobic and anaerobic biodegradation, and applications.
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Affiliation(s)
- Rajendran Muthuraj
- Worn Again Technologies Ltd, Bio City, Pennyfoot St, NG1 1GF Nottingham, Nottinghamshire, United Kingdom
| | - Oscar Valerio
- Departamento de Ingeniería Química, Universidad de Concepción, Concepción, Chile
| | - Tizazu H Mekonnen
- Department of Chemical Engineering, Institute of Polymer Research, Waterloo Institute for Nanotechnology, University of Waterloo, 200 University Avenue West, Waterloo, ON, Canada.
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28
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Vu DH, Wainaina S, Taherzadeh MJ, Åkesson D, Ferreira JA. Production of polyhydroxyalkanoates (PHAs) by Bacillus megaterium using food waste acidogenic fermentation-derived volatile fatty acids. Bioengineered 2021; 12:2480-2498. [PMID: 34115556 PMCID: PMC8806590 DOI: 10.1080/21655979.2021.1935524] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022] Open
Abstract
High production costs still hamper fast expansion of commercial production of polyhydroxyalkanoates (PHAs). This problem is greatly related to the cultivation medium which accounts for up to 50% of the whole process costs. The aim of this research work was to evaluate the potential of using volatile fatty acids (VFAs), derived from acidogenic fermentation of food waste, as inexpensive carbon sources for the production of PHAs through bacterial cultivation. Bacillus megaterium could assimilate glucose, acetic acid, butyric acid, and caproic acid as single carbon sources in synthetic medium with maximum PHAs production yields of 9-11%, on a cell dry weight basis. Single carbon sources were then replaced by a mixture of synthetic VFAs and by a VFAs-rich stream from the acidogenic fermentation of food waste. After 72 h of cultivation, the VFAs were almost fully consumed by the bacterium in both media and PHAs production yields of 9-10%, on cell dry weight basis, were obtained. The usage of VFAs mixture was found to be beneficial for the bacterial growth that tackled the inhibition of propionic acid, iso-butyric acid, and valeric acid when these volatile fatty acids were used as single carbon sources. The extracted PHAs were revealed to be polyhydroxybutyrate (PHB) by characterization methods of Fourier-transform infrared spectroscopy (FTIR) and differential scanning calorimetry (DSC). The obtained results proved the possibility of using VFAs from acidogenic fermentation of food waste as a cheap substrate to reduce the cost of PHAs production.
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Affiliation(s)
- Danh H Vu
- Swedish Centre for Resource Recovery, University of Borås, Sweden
| | - Steven Wainaina
- Swedish Centre for Resource Recovery, University of Borås, Sweden
| | | | - Dan Åkesson
- Swedish Centre for Resource Recovery, University of Borås, Sweden
| | - Jorge A Ferreira
- Swedish Centre for Resource Recovery, University of Borås, Sweden
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29
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Bedade DK, Edson CB, Gross RA. Emergent Approaches to Efficient and Sustainable Polyhydroxyalkanoate Production. Molecules 2021; 26:3463. [PMID: 34200447 PMCID: PMC8201374 DOI: 10.3390/molecules26113463] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 05/25/2021] [Accepted: 05/27/2021] [Indexed: 11/16/2022] Open
Abstract
Petroleum-derived plastics dominate currently used plastic materials. These plastics are derived from finite fossil carbon sources and were not designed for recycling or biodegradation. With the ever-increasing quantities of plastic wastes entering landfills and polluting our environment, there is an urgent need for fundamental change. One component to that change is developing cost-effective plastics derived from readily renewable resources that offer chemical or biological recycling and can be designed to have properties that not only allow the replacement of current plastics but also offer new application opportunities. Polyhydroxyalkanoates (PHAs) remain a promising candidate for commodity bioplastic production, despite the many decades of efforts by academicians and industrial scientists that have not yet achieved that goal. This article focuses on defining obstacles and solutions to overcome cost-performance metrics that are not sufficiently competitive with current commodity thermoplastics. To that end, this review describes various process innovations that build on fed-batch and semi-continuous modes of operation as well as methods that lead to high cell density cultivations. Also, we discuss work to move from costly to lower cost substrates such as lignocellulose-derived hydrolysates, metabolic engineering of organisms that provide higher substrate conversion rates, the potential of halophiles to provide low-cost platforms in non-sterile environments for PHA formation, and work that uses mixed culture strategies to overcome obstacles of using waste substrates. We also describe historical problems and potential solutions to downstream processing for PHA isolation that, along with feedstock costs, have been an Achilles heel towards the realization of cost-efficient processes. Finally, future directions for efficient PHA production and relevant structural variations are discussed.
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Affiliation(s)
- Dattatray K. Bedade
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
| | - Cody B. Edson
- New York State Center for Polymer Synthesis, Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
| | - Richard A. Gross
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
- New York State Center for Polymer Synthesis, Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
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30
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Santolin L, Waldburger S, Neubauer P, Riedel SL. Substrate-Flexible Two-Stage Fed-Batch Cultivations for the Production of the PHA Copolymer P(HB- co-HHx) With Cupriavidus necator Re2058/pCB113. Front Bioeng Biotechnol 2021; 9:623890. [PMID: 33829008 PMCID: PMC8020817 DOI: 10.3389/fbioe.2021.623890] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Accepted: 03/02/2021] [Indexed: 11/13/2022] Open
Abstract
Recent studies of the impact and dimension of plastic pollution have drawn the attention to finding more sustainable alternatives to fossil-based plastics. Microbially produced polyhydroxyalkanoates (PHAs) biopolymers are strong candidates to replace conventional plastic materials, due to their true biodegradability and versatile properties. However, widespread use of these polymers is still hindered by their high cost of production. In the present study, we target high yields of the PHA copolymer poly(hydroxybutyrate-co-hydroxyhexanoate) [P(HB-co-HHx)] using a substrate-flexible two-stage fed-batch approach for the cultivation of the recombinant Cupriavidus necator strain Re2058/pCB113. A more substrate-flexible process allows to cope with constant price fluctuations and discontinuous supply of feedstocks on the market. Utilizing fructose for biomass accumulation and rapeseed oil for polymer production resulted in a final biomass concentration of 124 g L-1 with a polymer content of 86 wt% holding 17 mol% of HHx. Productivities were further optimized by operating the biomass accumulation stage in a "drain and fill" modus where 10% of the culture broth was recycled for semi-continuous biomass accumulation, after transferring 90% to a second bioreactor for PHA production. This strategy succeeded in shortening process times rising productivity yields to ∼1.45 g L-1 h-1.
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Affiliation(s)
- Lara Santolin
- Chair of Bioprocess Engineering, Institute of Biotechnology, Technische Universität Berlin, Berlin, Germany
| | - Saskia Waldburger
- Chair of Bioprocess Engineering, Institute of Biotechnology, Technische Universität Berlin, Berlin, Germany
| | - Peter Neubauer
- Chair of Bioprocess Engineering, Institute of Biotechnology, Technische Universität Berlin, Berlin, Germany
| | - Sebastian L Riedel
- Chair of Bioprocess Engineering, Institute of Biotechnology, Technische Universität Berlin, Berlin, Germany
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31
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Scheel RA, Ho T, Kageyama Y, Masisak J, McKenney S, Lundgren BR, Nomura CT. Optimizing a Fed-Batch High-Density Fermentation Process for Medium Chain-Length Poly(3-Hydroxyalkanoates) in Escherichia coli. Front Bioeng Biotechnol 2021; 9:618259. [PMID: 33718339 PMCID: PMC7953831 DOI: 10.3389/fbioe.2021.618259] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 02/08/2021] [Indexed: 11/15/2022] Open
Abstract
Production of medium chain-length poly(3-hydroxyalkanoates) [PHA] polymers with tightly defined compositions is an important area of research to expand the application and improve the properties of these promising biobased and biodegradable materials. PHA polymers with homopolymeric or defined compositions exhibit attractive material properties such as increased flexibility and elasticity relative to poly(3-hydroxybutyrate) [PHB]; however, these polymers are difficult to biosynthesize in native PHA-producing organisms, and there is a paucity of research toward developing high-density cultivation methods while retaining compositional control. In this study, we developed and optimized a fed-batch fermentation process in a stirred tank reactor, beginning with the biosynthesis of poly(3-hydroxydecanoate) [PHD] from decanoic acid by β-oxidation deficient recombinant Escherichia coli LSBJ using glucose as a co-substrate solely for growth. Bacteria were cultured in two stages, a biomass accumulation stage (37°C, pH 7.0) with glucose as the primary carbon source and a PHA biosynthesis stage (30°C, pH 8.0) with co-feeding of glucose and a fatty acid. Through iterative optimizations of semi-defined media composition and glucose feed rate, 6.0 g of decanoic acid was converted to PHD with an 87.5% molar yield (4.54 g L-1). Stepwise increases in the amount of decanoic acid fed during the fermentation correlated with an increase in PHD, resulting in a final decanoic acid feed of 25 g converted to PHD at a yield of 89.4% (20.1 g L-1, 0.42 g L-1 h-1), at which point foaming became uncontrollable. Hexanoic acid, octanoic acid, 10-undecenoic acid, and 10-bromodecanoic acid were all individually supplemented at 20 g each and successfully polymerized with yields ranging from 66.8 to 99.0% (9.24 to 18.2 g L-1). Using this bioreactor strategy, co-fatty acid feeds of octanoic acid/decanoic acid and octanoic acid/10-azidodecanoic acid (8:2 mol ratio each) resulted in the production of their respective copolymers at nearly the same ratio and at high yield, demonstrating that these methods can be used to control PHA copolymer composition.
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Affiliation(s)
- Ryan A. Scheel
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, United States
| | - Truong Ho
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, United States
| | - Yuki Kageyama
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, United States
- Division of Applied Chemistry, Department of Engineering, Hokkaido University, Sapporo, Japan
| | - Jessica Masisak
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, United States
| | - Seamus McKenney
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, United States
| | - Benjamin R. Lundgren
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, United States
| | - Christopher T. Nomura
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, United States
- Department of Biological Sciences, College of Science, University of Idaho, Moscow, ID, United States
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32
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Nygaard D, Yashchuk O, Noseda DG, Araoz B, Hermida ÉB. Improved fermentation strategies in a bioreactor for enhancing poly(3-hydroxybutyrate) (PHB) production by wild type Cupriavidus necator from fructose. Heliyon 2021; 7:e05979. [PMID: 33537471 PMCID: PMC7840857 DOI: 10.1016/j.heliyon.2021.e05979] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Revised: 11/20/2020] [Accepted: 01/11/2021] [Indexed: 11/26/2022] Open
Abstract
Poly(3-hydroxybutyrate) (PHB) belongs to the family of polyhydroxyalkanoates, biopolymers used for agricultural, industrial, or even medical applications. However, scaling up the production is still an issue due to the myriad of parameters involved in the fermentation processes. The present work seeks, firstly, to scale up poly(3-hydroxybutyrate) (PHB) production by wild type C. necator ATCC 17697 from shaken flasks to a stirred-tank bioreactor with the optimized media and fructose as carbon source. The second purpose is to improve the production of PHB by applying both the batch and fed-batch fermentation strategies in comparison with previous works of wild type C. necator with fructose. Furthermore, thinking of biomedical applications, physicochemical, and cytotoxicity analyses of the produced biopolymer, are presented. Fed-batch fermentation with an exponential feeding strategy enabled us to achieve the highest values of PHB concentration and productivity, 25.7 g/l and 0.43 g/(l h), respectively. The PHB productivity was 3.3 and 7.2 times higher than the one in batch strategy and shaken flask cultures, respectively. DSC, FTIR, 1H, and 13C NMR analysis led to determine that the biopolymer produced by C. necator ATCC 17697 has a molecular structure and characteristics in agreement with the commercial PHB. Additionally, the biopolymer does not induce cytotoxic effects on the NIH/3T3 cell culture. Due to the improved fermentation strategies, PHB concentration resulted in 40 % higher of the already reported one for wild type C. necator using other fed-batch modes and fructose as a carbon source. Thus the produced PHB could be attractive for biomedical applications, which generate a rising interest in polyhydroxyalkanoates during recent years.
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Affiliation(s)
- Daiana Nygaard
- School of Science and Technology, National University of San Martín (UNSAM), Av. 25 de mayo 1147, B1650HMK, San Martín, Buenos Aires, Argentina.,Argentine Council of Scientific and Technical Research (CONICET), Godoy Cruz 2290, C1425FQB, CABA, Argentina
| | - Oxana Yashchuk
- School of Science and Technology, National University of San Martín (UNSAM), Av. 25 de mayo 1147, B1650HMK, San Martín, Buenos Aires, Argentina.,Argentine Council of Scientific and Technical Research (CONICET), Godoy Cruz 2290, C1425FQB, CABA, Argentina
| | - Diego G Noseda
- Argentine Council of Scientific and Technical Research (CONICET), Godoy Cruz 2290, C1425FQB, CABA, Argentina.,Institute for Biotechnological Research, CONICET-UNSAM, 25 de Mayo y Francia, B1650HMK, San Martín, Buenos Aires, Argentina
| | - Beatriz Araoz
- School of Science and Technology, National University of San Martín (UNSAM), Av. 25 de mayo 1147, B1650HMK, San Martín, Buenos Aires, Argentina.,Argentine Council of Scientific and Technical Research (CONICET), Godoy Cruz 2290, C1425FQB, CABA, Argentina
| | - Élida B Hermida
- School of Science and Technology, National University of San Martín (UNSAM), Av. 25 de mayo 1147, B1650HMK, San Martín, Buenos Aires, Argentina.,Argentine Council of Scientific and Technical Research (CONICET), Godoy Cruz 2290, C1425FQB, CABA, Argentina
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33
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Dartiailh C, Blunt W, Sharma PK, Liu S, Cicek N, Levin DB. The Thermal and Mechanical Properties of Medium Chain-Length Polyhydroxyalkanoates Produced by Pseudomonas putida LS46 on Various Substrates. Front Bioeng Biotechnol 2021; 8:617489. [PMID: 33553122 PMCID: PMC7859343 DOI: 10.3389/fbioe.2020.617489] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Accepted: 12/21/2020] [Indexed: 11/13/2022] Open
Abstract
Medium chain-length polyhydroxyalkanoates (mcl-PHA) were produced by Pseudomonas putida LS46 cultured with a variety of carbohydrate and fatty acid substrates. The monomer compositions and molecular weights of the polymers varied greatly and was dependent on whether the substrate was metabolized via the fatty acid degradation or the de novo fatty acid synthesis pathways. The highest molecular weights were obtained from medium chain-length fatty acids, whereas low molecular weights were obtained from longer chain-length and more unsaturated fatty acids or carbohydrates. The differences in monomer compositions and molecular weights due to the choice of substrate did not affect the polymer thermal degradation point. The glass transition temperatures varied from -39.4°C to -52.7°C. The melting points, when observed, ranged from 43.2°C to 51.2°C. However, a profound substrate effect was observed on the crystallinity of these polymers. Reduced crystallinity was observed when the monomer compositions deviated away from C8-C10 monomer lengths. The highest crystallinity was observed from medium chain-length fatty acids, which resulted in polymers with the highest tensile strength. The polymer produced from octanoic acid exhibited the highest tensile strength of 4.3 MPa with an elongation-at-break of 162%, whereas the polymers produced from unsaturated, long-chain fatty acids remained amorphous. A comparative analysis of the substrate effect on the physical-mechanical and thermal properties of mcl-PHAs better clarifies the relationship between the monomer composition and their potential applications, and also aids to direct future PHA synthesis research toward properties of interest.
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Affiliation(s)
| | | | | | | | | | - David B. Levin
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB, Canada
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34
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Nitkiewicz T, Wojnarowska M, Sołtysik M, Kaczmarski A, Witko T, Ingrao C, Guzik M. How sustainable are biopolymers? Findings from a life cycle assessment of polyhydroxyalkanoate production from rapeseed-oil derivatives. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 749:141279. [PMID: 32818854 DOI: 10.1016/j.scitotenv.2020.141279] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Revised: 07/08/2020] [Accepted: 07/25/2020] [Indexed: 06/11/2023]
Abstract
The main purpose of the article was to compare different scenarios of biopolymer production and their impacts on the environment using Life Cycle Assessment. Three alternative polyhydroxyalkanoates (PHA: amorphous PHA and poly(3-hydroxybutyrate), P(3HB)) production scenarios were considered to assess its environmental impact: Scenario A - Production of mcl-PHA/P(3HB) from crude vegetable oil; Scenario B - Production of P(3HB) with biodiesel by-product; Scenario C - Production of mcl-PHA/P(3HB) from used vegetable oil. Subject to the scenario considered, it was shown that the environmental efficiency of PHA production is highly dependent on carbon sources used, and it is strongly supporting production of mcl-PHA instead of P(3HB). As LCA study shows, due to low yield of P(3HB) in comparison to mcl-PHA production in considered processes, all the P(3HB) production scenarios have higher impacts than the production of mcl-PHA. Production processes based on bacterial fermentation had its impacts related mostly to the raw materials used and to its separation phase. Additionally, using secondary materials instead of raw ones, namely used oil instead of virgin oil, gives significant improvement with regard to environmental impact. The resource efficiency is also the identified as the key factor with sensitivity analysis that indicates the possible increase of biopolymer yield as the most beneficial factor. Biobased polymers have big environmental potential but still need significant improvement with regard to their manufacturing processes in order to become more economically benign. Preferably production of these microbial polymers should be integrated into biorefinery blocks, where such waste stream arises (e.g. biodiesel production plant).
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Affiliation(s)
- Tomasz Nitkiewicz
- Life Cycle Modelling Centre, Faculty of Management, Częstochowa University of Technology, al. Armii Krajowej 19B, 42-200 Częstochowa, Poland
| | - Magdalena Wojnarowska
- Department of Product Technology and Ecology, Cracow University of Economics, ul. Rakowicka 27, 31-510 Kraków, Poland
| | - Mariusz Sołtysik
- Department of Management Process, Cracow University of Economics, ul. Rakowicka 27, 31-510 Kraków, Poland
| | - Adam Kaczmarski
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Krakow, Poland
| | - Tomasz Witko
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Krakow, Poland
| | - Carlo Ingrao
- Faculty of Engineering and Architecture, Kore University of Enna, Cittadella Universitaria, 94100 Enna, Italy
| | - Maciej Guzik
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Krakow, Poland.
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35
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Asiri F, Chen CH, Hwangbo M, Shao Y, Chu KH. From Organic Wastes to Bioplastics: Feasibility of
Nonsterile Poly(3-hydroxybutyrate) Production by Zobellella
denitrificans ZD1. ACS OMEGA 2020; 5:24158-24168. [PMID: 33015431 PMCID: PMC7528165 DOI: 10.1021/acsomega.9b04002] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Accepted: 08/03/2020] [Indexed: 05/04/2023]
Abstract
![]()
Poly(3-hydroxybutyrate)
(PHB)—a renewable and biodegradable
polymer—is a promising alternative to nonbiodegradable synthetic
plastics that are derived from petrochemicals. The methods currently
employed for PHB production are costly, in part, due to the expensive
cultivation feedstocks and the need to sterilize the culture medium,
which is energy-intensive. This study investigates the feasibility
of nonsterile PHB production from several saline organic wastes using
a salt-tolerant strain, Zobellella denitrificans ZD1 (referred to as strain ZD1). Factors such as the pH, salinity,
carbon/nitrogen (C/N) ratio, nitrogen source, and electron acceptor
that might affect the growth of strain ZD1 and its PHB production
were determined. Our results showed successful nonsterile PHB production
by growing the strain ZD1 on nonsterile synthetic crude glycerol,
high-strength saline wastewater, and real municipal wastewater-activated
sludge under saline conditions. The PHB production was significantly
enhanced when the levels of salts and nitrate-nitrogen in the culture
medium were increased. This study suggested a promising low-cost nonsterile
PHB production strategy from organic wastes using strain ZD1.
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Affiliation(s)
- Fahad Asiri
- Zachry
Department of Civil and Environmental Engineering, Texas A&M University, College
Station, Texas 77843-3136, United States
| | - Chih-Hung Chen
- Zachry
Department of Civil and Environmental Engineering, Texas A&M University, College
Station, Texas 77843-3136, United States
- Department
of Environmental Engineering, National Cheng
Kung University, Tainan 70101, Taiwan
| | - Myung Hwangbo
- Zachry
Department of Civil and Environmental Engineering, Texas A&M University, College
Station, Texas 77843-3136, United States
| | - Yiru Shao
- Zachry
Department of Civil and Environmental Engineering, Texas A&M University, College
Station, Texas 77843-3136, United States
| | - Kung-Hui Chu
- Zachry
Department of Civil and Environmental Engineering, Texas A&M University, College
Station, Texas 77843-3136, United States
- . Tel: (979)-845-1403. Fax: (979)-862-1542
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36
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Guzik M, Witko T, Steinbüchel A, Wojnarowska M, Sołtysik M, Wawak S. What Has Been Trending in the Research of Polyhydroxyalkanoates? A Systematic Review. Front Bioeng Biotechnol 2020; 8:959. [PMID: 33014998 PMCID: PMC7513618 DOI: 10.3389/fbioe.2020.00959] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 07/24/2020] [Indexed: 12/24/2022] Open
Abstract
Over the past decades, enormous progress has been achieved with regard to research on environmentally friendly polymers. One of the most prominent families of such biopolymers are bacterially synthesized polyhydroxyalkanoates (PHAs) that have been known since the 1920s. However, only as recent as the 1990s have extensive studies sprung out exponentially in this matter. Since then, different areas of exploration of these intriguing materials have been uncovered. However, no systematic review of undertaken efforts has been conducted so far. Therefore, we have performed an unbiased search of up-to-date literature to reveal trending topics in the research of PHAs over the past three decades by data mining of 2,227 publications. This allowed us to identify eight past and current trends in this area. Our study provides a comprehensive review of these trends and speculates where PHA research is heading.
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Affiliation(s)
- Maciej Guzik
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Kraków, Poland
| | - Tomasz Witko
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Kraków, Poland
| | - Alexander Steinbüchel
- Institut für Molekulare Mikrobiologie und Biotechnologie, Westfälische Wilhelms-Universität Münster, Münster, Germany
- Environmental Sciences Department, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Magdalena Wojnarowska
- Department of Product Technology and Ecology, Cracow University of Economics, Kraków, Poland
| | - Mariusz Sołtysik
- Department of Management Process, Cracow University of Economics, Kraków, Poland
| | - Sławomir Wawak
- Department of Management Process, Cracow University of Economics, Kraków, Poland
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37
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Choi SY, Cho IJ, Lee Y, Kim YJ, Kim KJ, Lee SY. Microbial Polyhydroxyalkanoates and Nonnatural Polyesters. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2020; 32:e1907138. [PMID: 32249983 DOI: 10.1002/adma.201907138] [Citation(s) in RCA: 62] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 01/20/2020] [Indexed: 06/11/2023]
Abstract
Microorganisms produce diverse polymers for various purposes such as storing genetic information, energy, and reducing power, and serving as structural materials and scaffolds. Among these polymers, polyhydroxyalkanoates (PHAs) are microbial polyesters synthesized and accumulated intracellularly as a storage material of carbon, energy, and reducing power under unfavorable growth conditions in the presence of excess carbon source. PHAs have attracted considerable attention for their wide range of applications in industrial and medical fields. Since the first discovery of PHA accumulating bacteria about 100 years ago, remarkable advances have been made in the understanding of PHA biosynthesis and metabolic engineering of microorganisms toward developing efficient PHA producers. Recently, nonnatural polyesters have also been synthesized by metabolically engineered microorganisms, which opened a new avenue toward sustainable production of more diverse plastics. Herein, the current state of PHAs and nonnatural polyesters is reviewed, covering mechanisms of microbial polyester biosynthesis, metabolic pathways, and enzymes involved in biosynthesis of short-chain-length PHAs, medium-chain-length PHAs, and nonnatural polyesters, especially 2-hydroxyacid-containing polyesters, metabolic engineering strategies to produce novel polymers and enhance production capabilities and fermentation, and downstream processing strategies for cost-effective production of these microbial polyesters. In addition, the applications of PHAs and prospects are discussed.
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Affiliation(s)
- So Young Choi
- Metabolic and Biomolecular Engineering National Research Laboratory, Systems Metabolic Engineering and Systems Healthcare Cross-Generation Collaborative Laboratory, Department of Chemical and Biomolecular Engineering (BK21 Plus Program), Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - In Jin Cho
- Metabolic and Biomolecular Engineering National Research Laboratory, Systems Metabolic Engineering and Systems Healthcare Cross-Generation Collaborative Laboratory, Department of Chemical and Biomolecular Engineering (BK21 Plus Program), Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Youngjoon Lee
- Metabolic and Biomolecular Engineering National Research Laboratory, Systems Metabolic Engineering and Systems Healthcare Cross-Generation Collaborative Laboratory, Department of Chemical and Biomolecular Engineering (BK21 Plus Program), Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Yeo-Jin Kim
- School of Life Sciences (KNU Creative BioResearch Group), KNU Institute for Microorganisms, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Kyung-Jin Kim
- School of Life Sciences (KNU Creative BioResearch Group), KNU Institute for Microorganisms, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu, 41566, Republic of Korea
| | - Sang Yup Lee
- Metabolic and Biomolecular Engineering National Research Laboratory, Systems Metabolic Engineering and Systems Healthcare Cross-Generation Collaborative Laboratory, Department of Chemical and Biomolecular Engineering (BK21 Plus Program), Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
- BioProcess Engineering Research Center and Bioinformatics Research Center, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
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Burniol-Figols A, Pinelo M, Skiadas IV, Gavala HN. Enhancing polyhydroxyalkanoate productivity with cell-retention membrane bioreactors. Biochem Eng J 2020. [DOI: 10.1016/j.bej.2020.107687] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Rodríguez Y, Firmino PIM, Pérez V, Lebrero R, Muñoz R. Biogas valorization via continuous polyhydroxybutyrate production by Methylocystis hirsuta in a bubble column bioreactor. WASTE MANAGEMENT (NEW YORK, N.Y.) 2020; 113:395-403. [PMID: 32585559 DOI: 10.1016/j.wasman.2020.06.009] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Revised: 05/25/2020] [Accepted: 06/11/2020] [Indexed: 06/11/2023]
Abstract
Creating additional value out of biogas during waste treatment has become a priority in past years. Biogas bioconversion into valuable bioproducts such as biopolymers has emerged as a promising strategy. This work assessed the operational feasibility of a bubble column bioreactor (BCB) implemented with gas recirculation and inoculated with a polyhydroxybutyrate (PHB)-producing strain using biogas as substrate. The BCB was initially operated at empty bed residence times (EBRTs) ranging from 30 to 120 min and gas recirculation ratios (R) from 0 to 30 to assess the gas-to-liquid mass transfer and bioconversion of CH4. Subsequently, the BCB was continuously operated at a R of 30 and an EBRT of 60 min under excess of nitrogen and nitrogen feast-famine cycles of 24 h:24 h to trigger PHB synthesis. Gas recirculation played a major role in CH4 gas-liquid transfer, providing almost fourfold higher CH4 elimination capacities (~41 g CH4 m-3 h-1) at the highest R and EBRT of 60 min. The long-term operation under N excess conditions entailed nitrite accumulation (induced by O2 limiting conditions) and concurrent methanotrophic activity inhibition above ~60 mg N-NO2- L-1. Adjusting the N-NO3- supply to match microbial N demand successfully prevented nitrite accumulation. Finally, the N feast-famine 24 h:24 h strategy supported a stable CH4 conversion with a removal efficiency of 70% along with a continuous PHB production, which yielded PHB accumulations of 14.5 ± 2.9% (mg PHB mg-1 total suspended solids × 100). These outcomes represent the first step towards the integration of biogas biorefineries into conventional anaerobic digestion plants.
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Affiliation(s)
- Yadira Rodríguez
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina s/n, 47011 Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina s/n, 47011 Valladolid, Spain
| | - Paulo Igor Milen Firmino
- Institute of Sustainable Processes, Dr. Mergelina s/n, 47011 Valladolid, Spain; Department of Hydraulic and Environmental Engineering, Federal University of Ceará, Fortaleza, Ceará, Brazil
| | - Víctor Pérez
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina s/n, 47011 Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina s/n, 47011 Valladolid, Spain
| | - Raquel Lebrero
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina s/n, 47011 Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina s/n, 47011 Valladolid, Spain
| | - Raúl Muñoz
- Department of Chemical Engineering and Environmental Technology, School of Industrial Engineering, University of Valladolid, Dr. Mergelina s/n, 47011 Valladolid, Spain; Institute of Sustainable Processes, Dr. Mergelina s/n, 47011 Valladolid, Spain.
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Brojanigo S, Parro E, Cazzorla T, Favaro L, Basaglia M, Casella S. Conversion of Starchy Waste Streams into Polyhydroxyalkanoates Using Cupriavidus necator DSM 545. Polymers (Basel) 2020; 12:polym12071496. [PMID: 32635554 PMCID: PMC7407217 DOI: 10.3390/polym12071496] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Revised: 06/26/2020] [Accepted: 06/30/2020] [Indexed: 01/23/2023] Open
Abstract
Due to oil shortage and environmental problems, synthetic plastics have to be replaced by different biodegradable materials. A promising alternative could be polyhydroxyalkanoates (PHAs), and the low-cost abundant agricultural starchy by-products could be usefully converted into PHAs by properly selected and/or developed microbes. Among the widely available starchy waste streams, a variety of residues have been explored as substrates, such as broken, discolored, unripe rice and white or purple sweet potato waste. Cupriavidus necator DSM 545, a well-known producer of PHAs, was adopted in a simultaneous saccharification and fermentation (SSF) process through an optimized dosage of the commercial amylases cocktail STARGEN™ 002. Broken rice was found to be the most promising carbon source with PHAs levels of up to 5.18 g/L. This research demonstrates that rice and sweet potato waste are low-cost feedstocks for PHAs production, paving the way for the processing of other starchy materials into bioplastics.
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Blunt W, Gaugler M, Collet C, Sparling R, Gapes DJ, Levin DB, Cicek N. Rheological Behavior of High Cell Density Pseudomonas putida LS46 Cultures during Production of Medium Chain Length Polyhydroxyalkanoate (PHA) Polymers. Bioengineering (Basel) 2019; 6:E93. [PMID: 31600906 PMCID: PMC6956342 DOI: 10.3390/bioengineering6040093] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 10/01/2019] [Accepted: 10/08/2019] [Indexed: 12/20/2022] Open
Abstract
The rheology of high-cell density (HCD) cultures is an important parameter for its impact on mixing and sparging, process scale-up, and downstream unit operations in bioprocess development. In this work, time-dependent rheological properties of HCD Pseudomonas putida LS46 cultures were monitored for microbial polyhydroxyalkanoate (PHA) production. As the cell density of the fed-batch cultivation increased (0 to 25 g·L-1 cell dry mass, CDM), the apparent viscosity increased nearly nine-fold throughout the fed-batch process. The medium behaved as a nearly Newtonian fluid at lower cell densities, and became increasingly shear-thinning as the cell density increased. However, shear-thickening behavior was observed at shearing rates of approximately 75 rad·s-1 or higher, and its onset increased with viscosity of the sample. The supernatant, which contained up to 9 g·L-1 soluble organic material, contributed more to the observed viscosity effect than did the presence of cells. Owing to this behavior, the oxygen transfer performance of the bioreactor, for otherwise constant operating conditions, was reduced by 50% over the cultivation time. This study has shown that the dynamic rheology of HCD cultures is an important engineering parameter that may impact the final outcome in PHA cultivations. Understanding and anticipating this behavior and its biochemical origins could be important for improving overall productivity, yield, process scalability, and the efficacy of downstream processing unit operations.
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Affiliation(s)
- Warren Blunt
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Marc Gaugler
- Scion Research, Te Papa Tipu Innovation Park, 49 Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - Christophe Collet
- Scion Research, Te Papa Tipu Innovation Park, 49 Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - Richard Sparling
- Department of Microbiology, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
| | - Daniel J Gapes
- Scion Research, Te Papa Tipu Innovation Park, 49 Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - David B Levin
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Nazim Cicek
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
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Blunt W, Dartiailh C, Sparling R, Gapes DJ, Levin DB, Cicek N. Development of High Cell Density Cultivation Strategies for Improved Medium Chain Length Polyhydroxyalkanoate Productivity Using Pseudomonas putida LS46. Bioengineering (Basel) 2019; 6:bioengineering6040089. [PMID: 31561519 PMCID: PMC6956024 DOI: 10.3390/bioengineering6040089] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2019] [Revised: 09/19/2019] [Accepted: 09/24/2019] [Indexed: 11/16/2022] Open
Abstract
High cell density (HCD) fed-batch cultures are widely perceived as a requisite for high-productivity polyhydroxyalkanoate (PHA) cultivation processes. In this work, a reactive pulse feed strategy (based on real-time CO2 or dissolved oxygen (DO) measurements as feedback variables) was used to control an oxygen-limited fed-batch process for improved productivity of medium chain length (mcl-) PHAs synthesized by Pseudomonas putida LS46. Despite the onset of oxygen limitation half-way through the process (14 h post inoculation), 28.8 ± 3.9 g L−1 total biomass (with PHA content up to 61 ± 8% cell dry mass) was reliably achieved within 27 h using octanoic acid as the carbon source in a bench-scale (7 L) bioreactor operated under atmospheric conditions. This resulted in a final volumetric productivity of 0.66 ± 0.14 g L−1 h−1. Delivering carbon to the bioreactor as a continuous drip feed process (a proactive feeding strategy compared to pulse feeding) made little difference on the final volumetric productivity of 0.60 ± 0.04 g L−1 h−1. However, the drip feed strategy favored production of non-PHA residual biomass during the growth phase, while pulse feeding favored a higher rate of mcl-PHA synthesis and yield during the storage phase. Overall, it was shown that the inherent O2-limitation brought about by HCD cultures can be used as a simple and effective control strategy for mcl-PHA synthesis from fatty acids. Furthermore, the pulse feed strategy appears to be a relatively easy and reliable method for rapid optimization of fed-batch processes, particularly when using toxic substrates like octanoic acid.
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Affiliation(s)
- Warren Blunt
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Christopher Dartiailh
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Richard Sparling
- Department of Microbiology, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
| | - Daniel J Gapes
- Scion Research, Te Papa Tipu Innovation Park, Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - David B Levin
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Nazim Cicek
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
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Reactive Melt Mixing of Poly(3-Hydroxybutyrate)/Rice Husk Flour Composites with Purified Biosustainably Produced Poly(3-Hydroxybutyrate- co-3-Hydroxyvalerate). MATERIALS 2019; 12:ma12132152. [PMID: 31277419 PMCID: PMC6651769 DOI: 10.3390/ma12132152] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Revised: 06/28/2019] [Accepted: 07/01/2019] [Indexed: 01/01/2023]
Abstract
Novel green composites based on commercial poly(3-hydroxybutyrate) (PHB) filled with 10 wt % rice husk flour (RHF) were melt-compounded in a mini-mixer unit using triglycidyl isocyanurate (TGIC) as compatibilizer and dicumyl peroxide (DCP) as initiator. Purified poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) produced by mixed bacterial cultures derived from fruit pulp waste was then incorporated into the green composite in contents in the 5-50 wt % range. Films for testing were obtained thereafter by thermo-compression and characterized. Results showed that the incorporation of up to 20 wt % of biowaste derived PHBV yielded green composite films with a high contact transparency, relatively low crystallinity, high thermal stability, improved mechanical ductility, and medium barrier performance to water vapor and aroma. This study puts forth the potential use of purified biosustainably produced PHBV as a cost-effective additive to develop more affordable and waste valorized food packaging articles.
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Switching from petro-plastics to microbial polyhydroxyalkanoates (PHA): the biotechnological escape route of choice out of the plastic predicament? EUROBIOTECH JOURNAL 2019. [DOI: 10.2478/ebtj-2019-0004] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Abstract
The benefit of biodegradable “green plastics” over established synthetic plastics from petro-chemistry, namely their complete degradation and safe disposal, makes them attractive for use in various fields, including agriculture, food packaging, and the biomedical and pharmaceutical sector. In this context, microbial polyhydroxyalkanoates (PHA) are auspicious biodegradable plastic-like polyesters that are considered to exert less environmental burden if compared to polymers derived from fossil resources.
The question of environmental and economic superiority of bio-plastics has inspired innumerable scientists during the last decades. As a matter of fact, bio-plastics like PHA have inherent economic drawbacks compared to plastics from fossil resources; they typically have higher raw material costs, and the processes are of lower productivity and are often still in the infancy of their technical development. This explains that it is no trivial task to get down the advantage of fossil-based competitors on the plastic market. Therefore, the market success of biopolymers like PHA requires R&D progress at all stages of the production chain in order to compensate for this disadvantage, especially as long as fossil resources are still available at an ecologically unjustifiable price as it does today.
Ecological performance is, although a logical argument for biopolymers in general, not sufficient to make industry and the society switch from established plastics to bio-alternatives. On the one hand, the review highlights that there’s indeed an urgent necessity to switch to such alternatives; on the other hand, it demonstrates the individual stages of the production chain, which need to be addressed to make PHA competitive in economic, environmental, ethical, and performance-related terms. In addition, it is demonstrated how new, smart PHA-based materials can be designed, which meet the customer’s expectations when applied, e.g., in the biomedical or food packaging sector.
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