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Gao X, Zhang S, Liu K, Tan Z, Zhao G, Han Y, Cheng Y, Li C, Li F, Tian Y, Li P. An Adaptive Joint CCA-ICA Method for Ocular Artifact Removal and its Application to Emotion Classification. J Neurosci Methods 2023; 390:109841. [PMID: 36948359 DOI: 10.1016/j.jneumeth.2023.109841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2023] [Revised: 03/10/2023] [Accepted: 03/19/2023] [Indexed: 03/24/2023]
Abstract
BACKGROUND The quality of Electroencephalogram (EEG) signals is critical for revealing the neural mechanism of emotions. However, ocular artifacts decreased the signal to noise ratio (SNR) and covered the inherent cognitive component of EEGs, which pose a great challenge in neuroscience research. NEW METHOD We proposed a novel unsupervised learning algorithm to adaptively remove the ocular artifacts by combining canonical correlation analysis (CCA), independent component analysis (ICA), higher-order statistics, empirical mode decomposition (EMD), and wavelet denoising techniques. Specifically, the combination of CCA and ICA aimed to improve the quality of source separation, while the higher-order statistics further located the source of ocular artifacts. Subsequently, these noised sources were further corrected by EMD and wavelet denoising to improve SNR of EEG signals. RESULTS We evaluated the performance of our proposed method with simulation studies and real EEG applications. The results of simulation study showed our proposed method could significantly improve the quality of signals under almost all noise conditions compared to four state-of-art methods. Consistently, the experiments of real EEG applications showed that the proposed methods could efficiently restrict the components of ocular artifacts and preserve the inherent information of cognition processing to improve the reliability of related analysis such as power spectral density (PSD) and emotion recognition. COMPARISON WITH EXISTING METHODS Our proposed model outperforms the comparative methods in EEG recovery, which further improve the application performance such as PSD analysis and emotion recognition. CONCLUSIONS The superior performance of our proposed method suggests that it is promising for removing ocular artifacts from EEG signals, which offers an efficient EEG preprocessing technology for the development of brain computer interface such as emotion recognition.
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Affiliation(s)
- Xiaohui Gao
- the School of Bioinformatics, Chongqing University of Posts and Telecommunications, Chongqing, 400065, China; Chongqing Institute for Brain and Intelligence, Guangyang Bay Laboratory, Chongqing 400064, China; Institute for Advanced Sciences, Chongqing University of Posts and Communications
| | - Shilai Zhang
- the Clinical Hospital of Chengdu Brain Science In-stitute, MOE Key Lab for Neuroinformation and School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China
| | - Ke Liu
- the Chongqing University of Posts and Telecommunications Chongqing Key Laboratory of Computational Intelligence Chongqing, 400065, China
| | - Ziqin Tan
- the School of Bioinformatics, Chongqing University of Posts and Telecommunications, Chongqing, 400065, China; Chongqing Institute for Brain and Intelligence, Guangyang Bay Laboratory, Chongqing 400064, China; Institute for Advanced Sciences, Chongqing University of Posts and Communications
| | - Guanyi Zhao
- the School of Bioinformatics, Chongqing University of Posts and Telecommunications, Chongqing, 400065, China; Chongqing Institute for Brain and Intelligence, Guangyang Bay Laboratory, Chongqing 400064, China; Institute for Advanced Sciences, Chongqing University of Posts and Communications
| | - Yumeng Han
- the School of Bioinformatics, Chongqing University of Posts and Telecommunications, Chongqing, 400065, China; Chongqing Institute for Brain and Intelligence, Guangyang Bay Laboratory, Chongqing 400064, China; Institute for Advanced Sciences, Chongqing University of Posts and Communications
| | - Yue Cheng
- the Key Laboratory of Intelligent Analysis and Decision on Complex Systems, Chongqing University of Posts and Telecommunications, Chongqing, 400065, China
| | - Cunbo Li
- the Clinical Hospital of Chengdu Brain Science In-stitute, MOE Key Lab for Neuroinformation and School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China
| | - Fali Li
- the Clinical Hospital of Chengdu Brain Science In-stitute, MOE Key Lab for Neuroinformation and School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China.
| | - Yin Tian
- the School of Bioinformatics, Chongqing University of Posts and Telecommunications, Chongqing, 400065, China; Chongqing Institute for Brain and Intelligence, Guangyang Bay Laboratory, Chongqing 400064, China; Institute for Advanced Sciences, Chongqing University of Posts and Communications.
| | - Peiyang Li
- the School of Bioinformatics, Chongqing University of Posts and Telecommunications, Chongqing, 400065, China; Chongqing Institute for Brain and Intelligence, Guangyang Bay Laboratory, Chongqing 400064, China; Institute for Advanced Sciences, Chongqing University of Posts and Communications.
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2
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Chiarion G, Sparacino L, Antonacci Y, Faes L, Mesin L. Connectivity Analysis in EEG Data: A Tutorial Review of the State of the Art and Emerging Trends. Bioengineering (Basel) 2023; 10:bioengineering10030372. [PMID: 36978763 PMCID: PMC10044923 DOI: 10.3390/bioengineering10030372] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 03/10/2023] [Accepted: 03/14/2023] [Indexed: 03/30/2023] Open
Abstract
Understanding how different areas of the human brain communicate with each other is a crucial issue in neuroscience. The concepts of structural, functional and effective connectivity have been widely exploited to describe the human connectome, consisting of brain networks, their structural connections and functional interactions. Despite high-spatial-resolution imaging techniques such as functional magnetic resonance imaging (fMRI) being widely used to map this complex network of multiple interactions, electroencephalographic (EEG) recordings claim high temporal resolution and are thus perfectly suitable to describe either spatially distributed and temporally dynamic patterns of neural activation and connectivity. In this work, we provide a technical account and a categorization of the most-used data-driven approaches to assess brain-functional connectivity, intended as the study of the statistical dependencies between the recorded EEG signals. Different pairwise and multivariate, as well as directed and non-directed connectivity metrics are discussed with a pros-cons approach, in the time, frequency, and information-theoretic domains. The establishment of conceptual and mathematical relationships between metrics from these three frameworks, and the discussion of novel methodological approaches, will allow the reader to go deep into the problem of inferring functional connectivity in complex networks. Furthermore, emerging trends for the description of extended forms of connectivity (e.g., high-order interactions) are also discussed, along with graph-theory tools exploring the topological properties of the network of connections provided by the proposed metrics. Applications to EEG data are reviewed. In addition, the importance of source localization, and the impacts of signal acquisition and pre-processing techniques (e.g., filtering, source localization, and artifact rejection) on the connectivity estimates are recognized and discussed. By going through this review, the reader could delve deeply into the entire process of EEG pre-processing and analysis for the study of brain functional connectivity and learning, thereby exploiting novel methodologies and approaches to the problem of inferring connectivity within complex networks.
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Affiliation(s)
- Giovanni Chiarion
- Mathematical Biology and Physiology, Department Electronics and Telecommunications, Politecnico di Torino, 10129 Turin, Italy
| | - Laura Sparacino
- Department of Engineering, University of Palermo, 90128 Palermo, Italy
| | - Yuri Antonacci
- Department of Engineering, University of Palermo, 90128 Palermo, Italy
| | - Luca Faes
- Department of Engineering, University of Palermo, 90128 Palermo, Italy
| | - Luca Mesin
- Mathematical Biology and Physiology, Department Electronics and Telecommunications, Politecnico di Torino, 10129 Turin, Italy
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3
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Lee PL, Chen SH, Chang TC, Lee WK, Hsu HT, Chang HH. Continual Learning of a Transformer-Based Deep Learning Classifier Using an Initial Model from Action Observation EEG Data to Online Motor Imagery Classification. Bioengineering (Basel) 2023; 10:bioengineering10020186. [PMID: 36829681 PMCID: PMC9952173 DOI: 10.3390/bioengineering10020186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2022] [Revised: 01/20/2023] [Accepted: 01/24/2023] [Indexed: 02/04/2023] Open
Abstract
The motor imagery (MI)-based brain computer interface (BCI) is an intuitive interface that enables users to communicate with external environments through their minds. However, current MI-BCI systems ask naïve subjects to perform unfamiliar MI tasks with simple textual instruction or a visual/auditory cue. The unclear instruction for MI execution not only results in large inter-subject variability in the measured EEG patterns but also causes the difficulty of grouping cross-subject data for big-data training. In this study, we designed an BCI training method in a virtual reality (VR) environment. Subjects wore a head-mounted device (HMD) and executed action observation (AO) concurrently with MI (i.e., AO + MI) in VR environments. EEG signals recorded in AO + MI task were used to train an initial model, and the initial model was continually improved by the provision of EEG data in the following BCI training sessions. We recruited five healthy subjects, and each subject was requested to participate in three kinds of tasks, including an AO + MI task, an MI task, and the task of MI with visual feedback (MI-FB) three times. This study adopted a transformer- based spatial-temporal network (TSTN) to decode the user's MI intentions. In contrast to other convolutional neural network (CNN) or recurrent neural network (RNN) approaches, the TSTN extracts spatial and temporal features, and applies attention mechanisms along spatial and temporal dimensions to perceive the global dependencies. The mean detection accuracies of TSTN were 0.63, 0.68, 0.75, and 0.77 in the MI, first MI-FB, second MI-FB, and third MI-FB sessions, respectively. This study demonstrated the AO + MI gave an easier way for subjects to conform their imagery actions, and the BCI performance was improved with the continual learning of the MI-FB training process.
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Affiliation(s)
- Po-Lei Lee
- Department of Electrical Engineering, National Central University, Taoyuan 320, Taiwan
- Pervasive Artificial Intelligence Research Labs, Hsinchu 300, Taiwan
| | - Sheng-Hao Chen
- Department of Electrical Engineering, National Central University, Taoyuan 320, Taiwan
| | - Tzu-Chien Chang
- Department of Electrical Engineering, National Central University, Taoyuan 320, Taiwan
| | - Wei-Kung Lee
- Department of Rehabilitation, Taoyuan General Hospital, Taoyuan 330, Taiwan
| | - Hao-Teng Hsu
- Department of Electrical Engineering, National Central University, Taoyuan 320, Taiwan
- Pervasive Artificial Intelligence Research Labs, Hsinchu 300, Taiwan
| | - Hsiao-Huang Chang
- Division of Cardiovascular Surgery, Department of Surgery, Taipei Veterans General Hospital, Taipei 112, Taiwan
- Department of Surgery, School of Medicine, College of Medicine, Taipei Medical University, Taipei 110, Taiwan
- Correspondence: ; Tel.: +886-937-919-107
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4
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Zhou TH, Liang W, Liu H, Wang L, Ryu KH, Nam KW. EEG Emotion Recognition Applied to the Effect Analysis of Music on Emotion Changes in Psychological Healthcare. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 20:378. [PMID: 36612700 PMCID: PMC9819891 DOI: 10.3390/ijerph20010378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2022] [Revised: 12/23/2022] [Accepted: 12/24/2022] [Indexed: 06/17/2023]
Abstract
Music therapy is increasingly being used to promote physical health. Emotion semantic recognition is more objective and provides direct awareness of the real emotional state based on electroencephalogram (EEG) signals. Therefore, we proposed a music therapy method to carry out emotion semantic matching between the EEG signal and music audio signal, which can improve the reliability of emotional judgments, and, furthermore, deeply mine the potential influence correlations between music and emotions. Our proposed EER model (EEG-based Emotion Recognition Model) could identify 20 types of emotions based on 32 EEG channels, and the average recognition accuracy was above 90% and 80%, respectively. Our proposed music-based emotion classification model (MEC model) could classify eight typical emotion types of music based on nine music feature combinations, and the average classification accuracy was above 90%. In addition, the semantic mapping was analyzed according to the influence of different music types on emotional changes from different perspectives based on the two models, and the results showed that the joy type of music video could improve fear, disgust, mania, and trust emotions into surprise or intimacy emotions, while the sad type of music video could reduce intimacy to the fear emotion.
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Affiliation(s)
- Tie Hua Zhou
- Department of Computer Science and Technology, School of Computer Science, Northeast Electric Power University, Jilin 132000, China
| | - Wenlong Liang
- Department of Computer Science and Technology, School of Computer Science, Northeast Electric Power University, Jilin 132000, China
| | - Hangyu Liu
- Department of Computer Science and Technology, School of Computer Science, Northeast Electric Power University, Jilin 132000, China
| | - Ling Wang
- Department of Computer Science and Technology, School of Computer Science, Northeast Electric Power University, Jilin 132000, China
| | - Keun Ho Ryu
- Data Science Laboratory, Faculty of Information Technology, Ton Duc Thang University, Ho Chi Minh City 700000, Vietnam
- Biomedical Engineering Institute, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Kwang Woo Nam
- Department of Computer and Information Engineering, Kunsan National University, Gunsan 54150, Republic of Korea
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5
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Chen X, Gupta RS, Gupta L. Exploiting the Cone of Influence for Improving the Performance of Wavelet Transform-Based Models for ERP/EEG Classification. Brain Sci 2022; 13:brainsci13010021. [PMID: 36672003 PMCID: PMC9856575 DOI: 10.3390/brainsci13010021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Revised: 12/10/2022] [Accepted: 12/19/2022] [Indexed: 12/24/2022] Open
Abstract
Features extracted from the wavelet transform coefficient matrix are widely used in the design of machine learning models to classify event-related potential (ERP) and electroencephalography (EEG) signals in a wide range of brain activity research and clinical studies. This novel study is aimed at dramatically improving the performance of such wavelet-based classifiers by exploiting information offered by the cone of influence (COI) of the continuous wavelet transform (CWT). The COI is a boundary that is superimposed on the wavelet scalogram to delineate the coefficients that are accurate from those that are inaccurate due to edge effects. The features derived from the inaccurate coefficients are, therefore, unreliable. In this study, it is hypothesized that the classifier performance would improve if unreliable features, which are outside the COI, are zeroed out, and the performance would improve even further if those features are cropped out completely. The entire, zeroed out, and cropped scalograms are referred to as the "same" (S)-scalogram, "zeroed out" (Z)-scalogram, and the "valid" (V)-scalogram, respectively. The strategy to validate the hypotheses is to formulate three classification approaches in which the feature vectors are extracted from the (a) S-scalogram in the standard manner, (b) Z-scalogram, and (c) V-scalogram. A subsampling strategy is developed to generate small-sample ERP ensembles to enable customized classifier design for single subjects, and a strategy is developed to select a subset of channels from multiple ERP channels. The three scalogram approaches are implemented using support vector machines, random forests, k-nearest neighbor, multilayer perceptron neural networks, and deep learning convolution neural networks. In order to validate the performance hypotheses, experiments are designed to classify the multi-channel ERPs of five subjects engaged in distinguishing between synonymous and non-synonymous word pairs. The results confirm that the classifiers using the Z-scalogram features outperform those using the S-scalogram features, and the classifiers using the V-scalogram features outperform those using the Z-scalogram features. Most importantly, the relative improvement of the V-scalogram classifiers over the standard S-scalogram classifiers is dramatic. Additionally, enabling the design of customized classifiers for individual subjects is an important contribution to ERP/EEG-based studies and diagnoses of patient-specific disorders.
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Affiliation(s)
- Xiaoqian Chen
- School of Electrical, Computer, and Biomedical Engineering, Southern Illinois University, Carbondale, IL 62901, USA
| | - Resh S. Gupta
- Center of Excellence for Stress and Mental Health, VA San Diego Healthcare System, San Diego, CA 92161, USA
| | - Lalit Gupta
- School of Electrical, Computer, and Biomedical Engineering, Southern Illinois University, Carbondale, IL 62901, USA
- Correspondence:
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6
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Yang L, He J, Liu D, Zheng W, Song Z. EEG Microstate Features as an Automatic Recognition Model of High-Density Epileptic EEG Using Support Vector Machine. Brain Sci 2022; 12:brainsci12121731. [PMID: 36552190 PMCID: PMC9775561 DOI: 10.3390/brainsci12121731] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 12/10/2022] [Accepted: 12/14/2022] [Indexed: 12/24/2022] Open
Abstract
Epilepsy is one of the most serious nervous system diseases; it can be diagnosed accurately by video electroencephalogram. In this study, we analyzed microstate epileptic electroencephalogram (EEG) to aid in the diagnosis and identification of epilepsy. We recruited patients with focal epilepsy and healthy participants from the Third Xiangya Hospital and recorded their resting EEG data. In this study, the EEG data were analyzed by microstate analysis, and the support vector machine (SVM) classifier was used for automatic epileptic EEG classification based on features of the EEG microstate series, including microstate parameters (duration, occurrence, and coverage), linear features (median, second quartile, mean, kurtosis, and skewness) and non-linear features (Petrosian fractal dimension, approximate entropy, sample entropy, fuzzy entropy, and Lempel-Ziv complexity). In the gamma sub-band, the microstate parameters as a model were the best for interictal epilepsy recognition, with an accuracy of 87.18%, recall of 70.59%, and an area under the curve of 94.52%. There was a recognition effect of interictal epilepsy through the features extracted from the EEG microstate, which varied within the 4~45 Hz band with an accuracy of 79.55%. Based on the SVM classifier, microstate parameters and EEG features can be effectively used to classify epileptic EEG, and microstate parameters can better classify epileptic EEG compared with EEG features.
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Affiliation(s)
| | | | | | | | - Zhi Song
- Correspondence: ; Tel.: +1-39-74-814-092
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7
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Islam MS, Hussain I, Rahman MM, Park SJ, Hossain MA. Explainable Artificial Intelligence Model for Stroke Prediction Using EEG Signal. SENSORS (BASEL, SWITZERLAND) 2022; 22:s22249859. [PMID: 36560227 PMCID: PMC9782764 DOI: 10.3390/s22249859] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 11/30/2022] [Accepted: 12/14/2022] [Indexed: 05/07/2023]
Abstract
State-of-the-art healthcare technologies are incorporating advanced Artificial Intelligence (AI) models, allowing for rapid and easy disease diagnosis. However, most AI models are considered "black boxes," because there is no explanation for the decisions made by these models. Users may find it challenging to comprehend and interpret the results. Explainable AI (XAI) can explain the machine learning (ML) outputs and contribution of features in disease prediction models. Electroencephalography (EEG) is a potential predictive tool for understanding cortical impairment caused by an ischemic stroke and can be utilized for acute stroke prediction, neurologic prognosis, and post-stroke treatment. This study aims to utilize ML models to classify the ischemic stroke group and the healthy control group for acute stroke prediction in active states. Moreover, XAI tools (Eli5 and LIME) were utilized to explain the behavior of the model and determine the significant features that contribute to stroke prediction models. In this work, we studied 48 patients admitted to a hospital with acute ischemic stroke and 75 healthy adults who had no history of identified other neurological illnesses. EEG was obtained within three months following the onset of ischemic stroke symptoms using frontal, central, temporal, and occipital cortical electrodes (Fz, C1, T7, Oz). EEG data were collected in an active state (walking, working, and reading tasks). In the results of the ML approach, the Adaptive Gradient Boosting models showed around 80% accuracy for the classification of the control group and the stroke group. Eli5 and LIME were utilized to explain the behavior of the stroke prediction model and interpret the model locally around the prediction. The Eli5 and LIME interpretable models emphasized the spectral delta and theta features as local contributors to stroke prediction. From the findings of this explainable AI research, it is expected that the stroke-prediction XAI model will help with post-stroke treatment and recovery, as well as help healthcare professionals, make their diagnostic decisions more explainable.
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Affiliation(s)
- Mohammed Saidul Islam
- Network and Data Analysis Group, Department of Computer Science and Engineering, Islamic University and Technology (IUT), Gazipur 1704, Bangladesh
| | - Iqram Hussain
- Department of Biomedical Engineering, Medical Research Center, College of Medicine, Seoul National University, Seoul 03080, Republic of Korea
- Data Mind Ltd., Dhaka 1230, Bangladesh
- Correspondence: or (I.H.); (M.A.H.)
| | - Md Mezbaur Rahman
- Network and Data Analysis Group, Department of Computer Science and Engineering, Islamic University and Technology (IUT), Gazipur 1704, Bangladesh
| | - Se Jin Park
- AI-Based Healthcare Research Group, Sewon Intelligence Ltd., Seoul 04512, Republic of Korea
| | - Md Azam Hossain
- Network and Data Analysis Group, Department of Computer Science and Engineering, Islamic University and Technology (IUT), Gazipur 1704, Bangladesh
- Correspondence: or (I.H.); (M.A.H.)
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8
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Wu W, Ma L, Lian B, Cai W, Zhao X. Few-Electrode EEG from the Wearable Devices Using Domain Adaptation for Depression Detection. BIOSENSORS 2022; 12:1087. [PMID: 36551054 PMCID: PMC9775005 DOI: 10.3390/bios12121087] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Revised: 11/16/2022] [Accepted: 11/23/2022] [Indexed: 06/17/2023]
Abstract
Nowadays, major depressive disorder (MDD) has become a crucial mental disease that endangers human health. Good results have been achieved by electroencephalogram (EEG) signals in the detection of depression. However, EEG signals are time-varying, and the distributions of the different subjects' data are non-uniform, which poses a bad influence on depression detection. In this paper, the deep learning method with domain adaptation is applied to detect depression based on EEG signals. Firstly, the EEG signals are preprocessed and then transformed into pictures by two methods: the first one is to present the three channels of EEG separately in the same image, and the second one is the RGB synthesis of the three channels of EEG. Finally, the training and prediction are performed in the domain adaptation model. The results indicate that the domain adaptation model can effectively extract EEG features and obtain an average accuracy of 77.0 ± 9.7%. This paper proves that the domain adaptation method can effectively weaken the inherent differences of EEG signals, making the diagnosis of different users more accurate.
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Affiliation(s)
- Wei Wu
- School of Information Science and Engineering, NingboTech University, Ningbo 315100, China
- School of Information Science and Engineering, Zhejiang Sci-Tech University, Hangzhou 310018, China
| | - Longhua Ma
- School of Information Science and Engineering, NingboTech University, Ningbo 315100, China
| | - Bin Lian
- School of Information Science and Engineering, NingboTech University, Ningbo 315100, China
| | - Weiming Cai
- School of Information Science and Engineering, NingboTech University, Ningbo 315100, China
| | - Xianghong Zhao
- School of Information Science and Engineering, NingboTech University, Ningbo 315100, China
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9
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EEG Network Analysis in Epilepsy with Generalized Tonic–Clonic Seizures Alone. Brain Sci 2022; 12:brainsci12111574. [DOI: 10.3390/brainsci12111574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 11/14/2022] [Accepted: 11/15/2022] [Indexed: 11/22/2022] Open
Abstract
Many contradictory theories regarding epileptogenesis in idiopathic generalized epilepsy have been proposed. This study aims to define the network that takes part in the formation of the spike-wave discharges in patients with generalized tonic–clonic seizures alone (GTCSa) and elucidate the network characteristics. Furthermore, we intend to define the most influential brain areas and clarify the connectivity pattern among them. The data were collected from 23 patients with GTCSa utilizing low-density electroencephalogram (EEG). The source localization of generalized spike-wave discharges (GSWDs) was conducted using the Standardized low-resolution brain electromagnetic tomography (sLORETA) methodology. Cortical connectivity was calculated utilizing the imaginary part of coherence. The network characteristics were investigated through small-world propensity and the integrated value of influence (IVI). Source localization analysis estimated that most sources of GSWDs were in the superior frontal gyrus and anterior cingulate. Graph theory analysis revealed that epileptic sources created a network that tended to be regularized during generalized spike-wave activity. The IVI analysis concluded that the most influential nodes were the left insular gyrus and the left inferior parietal gyrus at 3 and 4 Hz, respectively. In conclusion, some nodes acted mainly as generators of GSWDs and others as influential ones across the whole network.
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10
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Epileptic Seizure Detection Based on Variational Mode Decomposition and Deep Forest Using EEG Signals. Brain Sci 2022; 12:brainsci12101275. [PMID: 36291210 PMCID: PMC9599930 DOI: 10.3390/brainsci12101275] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Revised: 09/16/2022] [Accepted: 09/20/2022] [Indexed: 11/16/2022] Open
Abstract
Electroencephalography (EEG) records the electrical activity of the brain, which is an important tool for the automatic detection of epileptic seizures. It is certainly a very heavy burden to only recognize EEG epilepsy manually, so the method of computer-assisted treatment is of great importance. This paper presents a seizure detection algorithm based on variational modal decomposition (VMD) and a deep forest (DF) model. Variational modal decomposition is performed on EEG recordings, and the first three variational modal functions (VMFs) are selected to construct the time–frequency distribution of the EEG signals. Then, the log−Euclidean covariance matrix (LECM) is computed to represent the EEG properties and form EEG features. The deep forest model is applied to complete the EEG signal classification, which is a non-neural network deep model with a cascade structure that performs feature learning through the forest. In addition, to improve the classification accuracy, postprocessing techniques are performed to generate the discriminant results by moving average filtering and adaptive collar expansion. The algorithm was evaluated on the Bonn EEG dataset and the Freiburg long−term EEG dataset, and the former achieved a sensitivity and specificity of 99.32% and 99.31%, respectively. The mean sensitivity and specificity of this method for the 21 patients in the Freiburg dataset were 95.2% and 98.56%, respectively, with a false detection rate of 0.36/h. These results demonstrate the superior performance advantage of our algorithm and indicate its great research potential in epilepsy detection.
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Abstract
Electroencephalogram (EEG) artifacts such as eyeblink, eye movement, and muscle movements widely contaminate the EEG signals. Those unwanted artifacts corrupt the information contained in the EEG signals and degrade the performance of qualitative analysis of clinical applications and as well as EEG-based brain–computer interfaces (BCIs). The applications of wavelet transform in denoising EEG signals are increasing day by day due to its capability of handling non-stationary signals. All the reported wavelet denoising techniques for EEG signals are surveyed in this paper in terms of the quality of noise removal and retrieving important information. In order to evaluate the performance of wavelet denoising techniques for EEG signals and to express the quality of reconstruction, the techniques were evaluated based on the results shown in the respective literature. We also compare certain features in the evaluation of the wavelet denoising techniques, such as the requirement of reference channel, automation, online, and performance on a single channel.
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12
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Shi Y, Ying X, Yang J. Deep Unsupervised Domain Adaptation with Time Series Sensor Data: A Survey. SENSORS (BASEL, SWITZERLAND) 2022; 22:s22155507. [PMID: 35898010 PMCID: PMC9371201 DOI: 10.3390/s22155507] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2022] [Revised: 07/20/2022] [Accepted: 07/21/2022] [Indexed: 05/03/2023]
Abstract
Sensors are devices that output signals for sensing physical phenomena and are widely used in all aspects of our social production activities. The continuous recording of physical parameters allows effective analysis of the operational status of the monitored system and prediction of unknown risks. Thanks to the development of deep learning, the ability to analyze temporal signals collected by sensors has been greatly improved. However, models trained in the source domain do not perform well in the target domain due to the presence of domain gaps. In recent years, many researchers have used deep unsupervised domain adaptation techniques to address the domain gap between signals collected by sensors in different scenarios, i.e., using labeled data in the source domain and unlabeled data in the target domain to improve the performance of models in the target domain. This survey first summarizes the background of recent research on unsupervised domain adaptation with time series sensor data, the types of sensors used, the domain gap between the source and target domains, and commonly used datasets. Then, the paper classifies and compares different unsupervised domain adaptation methods according to the way of adaptation and summarizes different adaptation settings based on the number of source and target domains. Finally, this survey discusses the challenges of the current research and provides an outlook on future work. This survey systematically reviews and summarizes recent research on unsupervised domain adaptation for time series sensor data to provide the reader with a systematic understanding of the field.
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Lung Cancer Prediction Using Robust Machine Learning and Image Enhancement Methods on Extracted Gray-Level Co-Occurrence Matrix Features. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12136517] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
In the present era, cancer is the leading cause of demise in both men and women worldwide, with low survival rates due to inefficient diagnostic techniques. Recently, researchers have been devising methods to improve prediction performance. In medical image processing, image enhancement can further improve prediction performance. This study aimed to improve lung cancer image quality by utilizing and employing various image enhancement methods, such as image adjustment, gamma correction, contrast stretching, thresholding, and histogram equalization methods. We extracted the gray-level co-occurrence matrix (GLCM) features on enhancement images, and applied and optimized vigorous machine learning classification algorithms, such as the decision tree (DT), naïve Bayes, support vector machine (SVM) with Gaussian, radial base function (RBF), and polynomial. Without the image enhancement method, the highest performance was obtained using SVM, polynomial, and RBF, with accuracy of (99.89%). The image enhancement methods, such as image adjustment, contrast stretching at threshold (0.02, 0.98), and gamma correction at gamma value of 0.9, improved the prediction performance of our analysis on 945 images provided by the Lung Cancer Alliance MRI dataset, which yielded 100% accuracy and 1.00 of AUC using SVM, RBF, and polynomial kernels. The results revealed that the proposed methodology can be very helpful to improve the lung cancer prediction for further diagnosis and prognosis by expert radiologists to decrease the mortality rate.
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EEG Signals Based Internet Addiction Diagnosis Using Convolutional Neural Networks. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12136297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Internet addiction (IA), as a new and often unrecognized psychosocial disorder, endangers people’s health and their lives. However, the common biometric analysis based on the combination of EEG signals and results of questionnaires is not quantitative, and thus difficult to ensure a specific biomarker. This work aims to develop a deep learning algorithm (no need to identify biomarkers) used for diagnosing IA and evaluating therapy efficacy. Herein, a five-layer CNN model combined with a fast Fourier transform is proposed to diagnose IA quantitatively. This algorithm is validated in the Lemon dataset by using it to process raw data, full spectral power, and alpha-beta-gamma spectral power (related to IA). In contrast to alpha-beta-gamma spectral power, the results based on full spectral power show better performance (87.59% accuracy, 88.80% sensitivity, and 86.41% specificity), which confirms that the proposed algorithm can diagnose IA without biomarkers. In addition, this proposed CNN model presents obvious advantages in processing raw data, achieving 81.1% accuracy. Such results verify that this method can contribute to the reduction of diagnosis time and be potentially used in real-time health monitoring systems. This work provides a quantitative approach to diagnose IA and evaluate therapy efficacy, as a general strategy, and can be widely used in other disorder diagnoses that affect EEG signals, such as psychiatric disorders, substance dependence, and depression.
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Ara RK, Matiolański A, Dziech A, Baran R, Domin P, Wieczorkiewicz A. Fast and Efficient Method for Optical Coherence Tomography Images Classification Using Deep Learning Approach. SENSORS (BASEL, SWITZERLAND) 2022; 22:s22134675. [PMID: 35808169 PMCID: PMC9269557 DOI: 10.3390/s22134675] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Revised: 06/13/2022] [Accepted: 06/16/2022] [Indexed: 05/18/2023]
Abstract
The use of optical coherence tomography (OCT) in medical diagnostics is now common. The growing amount of data leads us to propose an automated support system for medical staff. The key part of the system is a classification algorithm developed with modern machine learning techniques. The main contribution is to present a new approach for the classification of eye diseases using the convolutional neural network model. The research concerns the classification of patients on the basis of OCT B-scans into one of four categories: Diabetic Macular Edema (DME), Choroidal Neovascularization (CNV), Drusen, and Normal. Those categories are available in a publicly available dataset of above 84,000 images utilized for the research. After several tested architectures, our 5-layer neural network gives us a promising result. We compared them to the other available solutions which proves the high quality of our algorithm. Equally important for the application of the algorithm is the computational time, which is reduced by the limited size of the model. In addition, the article presents a detailed method of image data augmentation and its impact on the classification results. The results of the experiments were also presented for several derived models of convolutional network architectures that were tested during the research. Improving processes in medical treatment is important. The algorithm cannot replace a doctor but, for example, can be a valuable tool for speeding up the process of diagnosis during screening tests.
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Affiliation(s)
- Rouhollah Kian Ara
- Institute of Telecommunications, AGH University of Science and Technology, 30-059 Krakow, Poland; (R.K.A.); (A.D.)
| | - Andrzej Matiolański
- Institute of Telecommunications, AGH University of Science and Technology, 30-059 Krakow, Poland; (R.K.A.); (A.D.)
- Correspondence:
| | - Andrzej Dziech
- Institute of Telecommunications, AGH University of Science and Technology, 30-059 Krakow, Poland; (R.K.A.); (A.D.)
| | - Remigiusz Baran
- Faculty of Electrical Engineering, Automatic Control and Computer Science, Kielce University of Technology, 25-314 Kielce, Poland;
| | - Paweł Domin
- Consultronix S.A., 32-083 Balice, Poland; (P.D.); (A.W.)
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