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Nodi SS, Paul M, Robinson N, Wang L, Rehman SU, Kabir MA. Munsell Soil Colour Prediction from the Soil and Soil Colour Book Using Patching Method and Deep Learning Techniques. SENSORS (BASEL, SWITZERLAND) 2025; 25:287. [PMID: 39797078 PMCID: PMC11723438 DOI: 10.3390/s25010287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2024] [Revised: 12/27/2024] [Accepted: 01/02/2025] [Indexed: 01/13/2025]
Abstract
Soil colour is a key indicator of soil health and the associated properties. In agriculture, soil colour provides farmers and advises with a visual guide to interpret soil functions and performance. Munsell colour charts have been used to determine soil colour for many years, but the process is fallible, as it depends on the user's perception. As smartphones are widely used and come with high-quality cameras, a popular one was used for capturing images for this study. This study aims to predict Munsell soil colour (MSC) from the Munsell soil colour book (MSCB) by using deep learning techniques on mobile-captured images. MSCB contains 14 pages and 443 colour chips. So, the number of classes for chip-by-chip prediction is very high, and the captured images are inadequate to train and validate using deep learning methods; thus, a patch-based mechanism was proposed to enrich the dataset. So, the course of action is to find the prediction accuracy of MSC for both page level and chip level by evaluating multiple deep learning methods combined with a patch-based mechanism. The analysis also provides knowledge about the best deep learning technique for MSC prediction. Without patching, the accuracy for chip-level prediction is below 40%, the page-level prediction is below 65%, and the accuracy with patching is around 95% for both, which is significant. Lastly, this study provides insights into the application of the proposed techniques and analysis within real-world soil and provides results with higher accuracy with a limited number of soil samples, indicating the proposed method's potential scalability and effectiveness with larger datasets.
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Affiliation(s)
- Sadia Sabrin Nodi
- School of Computing, Mathematics and Engineering, Charles Sturt University, Bathurst, NSW 2795, Australia; (M.P.); (S.u.R.); (M.A.K.)
- Cooperative Research Centre for High Performance Soils, Callaghan, NSW 2308, Australia; (N.R.); (L.W.)
| | - Manoranjan Paul
- School of Computing, Mathematics and Engineering, Charles Sturt University, Bathurst, NSW 2795, Australia; (M.P.); (S.u.R.); (M.A.K.)
- Cooperative Research Centre for High Performance Soils, Callaghan, NSW 2308, Australia; (N.R.); (L.W.)
| | - Nathan Robinson
- Cooperative Research Centre for High Performance Soils, Callaghan, NSW 2308, Australia; (N.R.); (L.W.)
- Centre for eResearch and Digital Innovation, Federation University, Mount Helen, VIC 3350, Australia
| | - Liang Wang
- Cooperative Research Centre for High Performance Soils, Callaghan, NSW 2308, Australia; (N.R.); (L.W.)
- Global Centre for Environmental Remediation, The University of Newcastle, Callaghan, NSW 2308, Australia
| | - Sabih ur Rehman
- School of Computing, Mathematics and Engineering, Charles Sturt University, Bathurst, NSW 2795, Australia; (M.P.); (S.u.R.); (M.A.K.)
| | - Muhammad Ashad Kabir
- School of Computing, Mathematics and Engineering, Charles Sturt University, Bathurst, NSW 2795, Australia; (M.P.); (S.u.R.); (M.A.K.)
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Wan S, Hou J, Zhao J, Clarke N, Kempenaar C, Chen X. Predicting Soil Organic Matter, Available Nitrogen, Available Phosphorus and Available Potassium in a Black Soil Using a Nearby Hyperspectral Sensor System. SENSORS (BASEL, SWITZERLAND) 2024; 24:2784. [PMID: 38732890 PMCID: PMC11086104 DOI: 10.3390/s24092784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2024] [Revised: 04/19/2024] [Accepted: 04/25/2024] [Indexed: 05/13/2024]
Abstract
Black soils, which play an important role in agricultural production and food security, are well known for their relatively high content of soil organic matter (SOM). SOM has a significant impact on the sustainability of farmland and provides nutrients for plants. Hyperspectral imaging (HSI) in the visible and near-infrared region has shown the potential to detect soil nutrient levels in the laboratory. However, using portable spectrometers directly in the field remains challenging due to variations in soil moisture (SM). The current study used spectral data captured by a handheld spectrometer outdoors to predict SOM, available nitrogen (AN), available phosphorus (AP) and available potassium (AK) with different SM levels. Partial least squares regression (PLSR) models were established to compare the predictive performance of air-dried soil samples with SMs around 20%, 30% and 40%. The results showed that the model established using dry sample data had the best performance (RMSE = 4.47 g/kg) for the prediction of SOM, followed by AN (RMSE = 20.92 mg/kg) and AK (RMSE = 22.67 mg/kg). The AP was better predicted by the model based on 30% SM (RMSE = 8.04 mg/kg). In general, model performance deteriorated with an increase in SM, except for the case of AP. Feature wavelengths for predicting four kinds of soil properties were recommended based on variable importance in the projection (VIP), which offered useful guidance for the development of portable hyperspectral sensors based on discrete wavebands to reduce cost and save time for on-site data collection.
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Affiliation(s)
- Shuming Wan
- Heilongjiang Academy of Black Soil Conservation and Utilization, Heilongjiang Academy of Agricultural Sciences, Harbin 150086, China;
- Agrosystems Research, Wageningen University & Research, P.O. Box 16, 6700 AA Wageningen, The Netherlands
| | - Jiaqi Hou
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Jiangsan Zhao
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, N-1431 Aas, Norway
| | - Nicholas Clarke
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, N-1431 Aas, Norway
| | - Corné Kempenaar
- Agrosystems Research, Wageningen University & Research, P.O. Box 16, 6700 AA Wageningen, The Netherlands
| | - Xueli Chen
- Heilongjiang Academy of Black Soil Conservation and Utilization, Heilongjiang Academy of Agricultural Sciences, Harbin 150086, China;
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Saad El Imanni H, El Harti A, Hssaisoune M, Velastegui-Montoya A, Elbouzidi A, Addi M, El Iysaouy L, El Hachimi J. Rapid and Automated Approach for Early Crop Mapping Using Sentinel-1 and Sentinel-2 on Google Earth Engine; A Case of a Highly Heterogeneous and Fragmented Agricultural Region. J Imaging 2022; 8:316. [PMID: 36547481 PMCID: PMC9783565 DOI: 10.3390/jimaging8120316] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 11/11/2022] [Accepted: 11/16/2022] [Indexed: 11/26/2022] Open
Abstract
Accurate and rapid crop type mapping is critical for agricultural sustainability. The growing trend of cloud-based geospatial platforms provides rapid processing tools and cloud storage for remote sensing data. In particular, a variety of remote sensing applications have made use of publicly accessible data from the Sentinel missions of the European Space Agency (ESA). However, few studies have employed these data to evaluate the effectiveness of Sentinel-1, and Sentinel-2 spectral bands and Machine Learning (ML) techniques in challenging highly heterogeneous and fragmented agricultural landscapes using the Google Earth Engine (GEE) cloud computing platform. This work aims to map, accurately and early, the crop types in a highly heterogeneous and fragmented agricultural region of the Tadla Irrigated Perimeter (TIP) as a case study using the high spatiotemporal resolution of Sentinel-1, Sentinel-2, and a Random Forest (RF) classifier implemented on GEE. More specifically, five experiments were performed to assess the optical band reflectance values, vegetation indices, and SAR backscattering coefficients on the accuracy of crop classification. Besides, two scenarios were used to assess the monthly temporal windows on classification accuracy. The findings of this study show that the fusion of Sentinel-1 and Sentinel-2 data can accurately produce the early crop mapping of the studied area with an Overall Accuracy (OA) reaching 95.02%. The scenarios prove that the monthly time series perform better in terms of classification accuracy than single monthly windows images. Red-edge and shortwave infrared bands can improve the accuracy of crop classification by 1.72% when compared to only using traditional bands (i.e., visible and near-infrared bands). The inclusion of two common vegetation indices (The Normalized Vegetation Index (NDVI), the Enhanced Vegetation Index (EVI)) and Sentinel-1 backscattering coefficients to the crop classification enhanced the overall classification accuracy by 0.02% and 2.94%, respectively, compared to using the Sentinel-2 reflectance bands alone. The monthly windows analysis indicated that the improvement in the accuracy of crop classification is the greatest when the March images are accessible, with an OA higher than 80%.
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Affiliation(s)
- Hajar Saad El Imanni
- Geomatics, Georesources and Environment Laboratory, Faculty of Sciences and Techniques, Sultan Moulay Slimane University, Beni Mellal 23023, Morocco
| | - Abderrazak El Harti
- Geomatics, Georesources and Environment Laboratory, Faculty of Sciences and Techniques, Sultan Moulay Slimane University, Beni Mellal 23023, Morocco
| | - Mohammed Hssaisoune
- Applied Geology and Geo-Environment Laboratory, Faculty of Sciences, Ibn Zohr University, Agadir 80000, Morocco
- Faculty of Applied Sciences, Ibn Zohr University, Ait Melloul 86150, Morocco
| | - Andrés Velastegui-Montoya
- Centro de Investigación y Proyectos Aplicados a las Ciencias de la Tierra (CIPAT), ESPOL Polytechnic University, Guayaquil P.O. Box 09-01-5863, Ecuador
- Facultad de Ingeniería en Ciencias de la Tierra (FICT), ESPOL Polytechnic University, Guayaquil P.O. Box 09-01-5863, Ecuador
- Geoscience Institute, Federal University of Pará, Belém 66075-110, Brazil
| | - Amine Elbouzidi
- Laboratoire d’Amélioration des Productions Agricoles, Biotechnologie et Environnement (LAPABE), Faculté des Sciences, Université Mohammed Premier, Oujda 60000, Morocco
| | - Mohamed Addi
- Laboratoire d’Amélioration des Productions Agricoles, Biotechnologie et Environnement (LAPABE), Faculté des Sciences, Université Mohammed Premier, Oujda 60000, Morocco
| | - Lahcen El Iysaouy
- ERSC, LEC, Research Center E3S, EMI, Mohammed V University in Rabat, BP765 Agdal, Rabat 10106, Morocco
| | - Jaouad El Hachimi
- Geomatics, Georesources and Environment Laboratory, Faculty of Sciences and Techniques, Sultan Moulay Slimane University, Beni Mellal 23023, Morocco
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