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Zakharov VM, Trofimov IE. Developmental noise, entropy, and biological system condition. Biosystems 2024; 244:105310. [PMID: 39154842 DOI: 10.1016/j.biosystems.2024.105310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2024] [Revised: 08/15/2024] [Accepted: 08/15/2024] [Indexed: 08/20/2024]
Abstract
Developmental noise is considered as a permissible level of entropy, as a compromise between the cost and needed precision of the realization of genetic information. In terms of entropy, noise is a measure of acceptable level of disorder to ensure a reliable system operation. Developmental noise plays a role in the observed phenotypic diversity and is associated with other indicators of the biological system condition. The thermodynamic characteristic of entropy by the energy metabolism also turns out to be related to the developmental noise. Phenotypic variability is largely determined by developmental homeostasis, including both canalization (an ability to form a similar phenotype under different conditions) and developmental stability (a capability for perfect development measured by noise level). It is shown that the change in the noise level, as an expression of the certain entropy level, unlike other forms of phenotypic variability, is a reflection of a change in the system condition. Although the entropy indices of ontogeny and community under certain conditions can change simultaneously, the entropy index at the level of developmental noise proves to be a more unambiguous and universal measure of the disorder of a biological system, compared to biodiversity indices at the community level.
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Affiliation(s)
- Vladimir M Zakharov
- Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, Russia
| | - Ilya E Trofimov
- Koltzov Institute of Developmental Biology of the Russian Academy of Sciences, Russia.
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Manuta N, Duro S, Szara T, Jashari T, Demircioğlu İ, Avanus K, Büyükünal SK. Skull asymmetry in various sheep breeds: Directional asymmetry and fluctuating asymmetry. Anat Histol Embryol 2024; 53:e13047. [PMID: 38702894 DOI: 10.1111/ahe.13047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 04/03/2024] [Accepted: 04/23/2024] [Indexed: 05/06/2024]
Abstract
Sheep (Ovis aries) play an important role in the economy of Turkey and the Balkan Peninsula due to their use in farming. As a domesticated species, sheep's morphometric and morphological diversity is likely determined by selective breeding practices rather than geographic distribution. This study aimed to analyse four different sheep breed skulls and reveal skull asymmetry using geometric morphometric methods. For this purpose, 2D images of 52 sheep skulls from different breeds were analysed from the dorsal view of the skull, using 28 landmarks. In the comparison of sheep skulls from the dorsal view, the first principal components for directional asymmetry (DA) and fluctuating asymmetry (FA) were 32.98% and 39.62% of the total variation, respectively. Sharri and Ivesi (Awassi) sheep breeds had the broadest distribution of skull shapes among the breeds, while Lara e Polisit was the most conservative breed. DA was used as a measure of biomechanical constraints, and FA was used as an indicator of environmental stress. Consistent with DA, both differences in centroid size and shape between breeds were statistically significant. No differences between males and females related to asymmetry were revealed. Ivesi sheep revealed the highest fluctuating asymmetry. Geometric morphometric methods proved to be a useful tool for distinguishing differences in the shape of the skull of different sheep breeds and also can be useful for taxonomic purposes.
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Affiliation(s)
- Nicoleta Manuta
- Institute of Graduate Studies, Istanbul University- Cerrahpaşa, Istanbul, Türkiye
| | - Sokol Duro
- Faculty of Veterinary Medicine, Agricultural University of Tirana, Tirana, Albania
| | - Tomasz Szara
- Department of Morphological Sciences, Institute of Veterinary Medicine, Warsaw University of Life Sciences-SGGW, Warsaw, Poland
| | - Tefik Jashari
- Institute of Graduate Studies, Istanbul University- Cerrahpaşa, Istanbul, Türkiye
| | - İsmail Demircioğlu
- Department of Anatomy, Faculty of Veterinary Medicine, Harran University, Şanlıurfa, Türkiye
| | - Kozet Avanus
- Department of Animal Breeding and Husbandry, Faculty of Veterinary Medicine, Istanbul University- Cerrahpaşa, Istanbul, Türkiye
| | - Serkan Kemal Büyükünal
- Department of Food Hygiene and Technology, Faculty of Veterinary Medicine, Istanbul University- Cerrahpaşa, Istanbul, Türkiye
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Forest Fragmentation and Developmental Stability of Wood Mice Apodemus sylvaticus: A Food-Mediated Effect? DIVERSITY 2023. [DOI: 10.3390/d15030423] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
Abstract
Generalist mice are key species for the long-term dynamics of fragmented forests due to their dual role as seed dispersers or predators of the dominant trees. Wood mice, Apodemus sylvaticus, usually act as a net predator in woodlots due to higher winter densities and earlier winter reproduction than in forests. Here we analyze the recruitment expectations of young mice born in woodlots in relation to food availability through an index of developmental stability that combined values of fluctuating asymmetry (FA) for six traits of the lower mandibles. FA was measured in young and adult mice caught at the end of the winter in control woodlots, food-supplemented woodlots and in a nearby large forest. Despite low sample sizes (n = 9 for young and n = 74 for adults), FA in young mice born in control woodlots were significantly higher than in those from food-supplemented woodlots and the forest and in all adults. Food limitation in woodlots was thus associated with increased developmental instability of young mice, but it had no effect on adults. Instability likely reduced the survival prospects of young mice through increased mortality, and this should be compensated by yearly recolonization of woodlots by adults from the agricultural matrix in autumn and winter. Future work analyzing mechanisms suggested here but using non-lethal methods will be important to clarify the impacts of FA on the population dynamics of wood mice.
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Fluctuating Asymmetry as a Measure of Stress in Natural Populations of Woody Plants: Influence of Ecological and Geographical Factors on Developmental Stability. Symmetry (Basel) 2023. [DOI: 10.3390/sym15030700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/14/2023] Open
Abstract
Fluctuating asymmetry is a sensitive indicator of favorable conditions during the period of individual development. The influence of climatic factors, biotopic conditions, latitude, altitude, and age of plants from the natural populations of the silver birch Betula pendula Roth was analyzed. The material consisted of 13,000 leaves of the silver birch from 11 regions of north-eastern Siberia. The influence of 23 climatic factors and six integrated coefficients characterizing the general suitability of the climate, as well as summer, winter, spring, and autumn was analyzed. The developmental stability of woody plants and, consequently, the level of the FA of the lamina in natural biotopes can vary in a wide range. We found that climatic factors, mainly conditions in the warm season, have a significant impact. We also noted the influence of the age, biotope, and light conditions. For Betula pendula, an increase in FA was registered on the ecological periphery of its range, i.e., on the edge of the forest belt in the north and in the mountains. The data obtained demonstrate the high influence of natural stress-inducing factors on development stability in plants.
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Yuan S, Zhang HT, Li X, Yue XX, Fu HP, Wu XD. The effect of grazing and reclamation on rodent community stability in the Alxa desert. Front Ecol Evol 2023. [DOI: 10.3389/fevo.2022.1105297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
Ecosystem stability has been of increasing interest in the past several decades as it helps predict the consequences of anthropogenic disturbances on ecosystems. A wild rodent community under reclamation and different grazing disturbances in the Alxa Desert was investigated using live trapping from 2006 to 2011. We studied the rodent community composition, community diversity, and variability of different life history strategies. These results showed that reclamation reduced rodent community stability by increasing temporal variability of community, reducing rodent community resistance as shown by decreasing dominance of KSS strategists, and increased the resistance variability of the rodent community by increasing the variability of abundance and richness for KSS strategists. Grazing reduced rodent community resilience by reducing the dominance of rRF strategists, and increased the resilience variability of the rodent community by increasing the variability of abundance and richness for rRF strategists. Those results may answer the three ecological questions about how ecosystems respond to disturbances from a diversity perspective. The ecosystems with intermediate disturbance are more stable, in other words, with higher resistance and resilience. The increase of KSS strategists means the increase of resistance of the community. The increase of rRF strategists means the increase of community resilience.
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Zhelev Z, Tsonev S, Mollov I. Are there correlations between the levels of fluctuating asymmetry in Pelophylax ridibundus (Anura: Ranidae) meristic morphological traits and morphological parameters used for assessing their physical fitness (health status)? ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:54677-54687. [PMID: 35306652 DOI: 10.1007/s11356-022-19690-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Accepted: 03/09/2022] [Indexed: 06/14/2023]
Abstract
The degree of developmental stability of individuals and populations is most often estimated by their level of fluctuating asymmetry (FA) - the random deviations from perfect symmetry. In our previous work, we recorded high levels of FA (FAMI index: frequency of asymmetric manifestation of an individual) in Pelophylax ridibundus populations that inhabit biotopes at Sazliyka River, south Bulgaria with high levels of anthropogenic pollution (domestic sewage pollution). At the same time, in the biotopes located in the upper reaches of the river (less disrupted habitats), the populations showed low levels of FA. Currently, we present the results of the study of the values of several morphological parameters: snout-vent length (SVL), body weight (BW), and body condition factor (CF) in the same populations of P. ridibundus. In addition, we evaluate the correlation between the values of these morphological parameters and the values of fluctuating asymmetry (the FAMI index), using the Kendall rank correlation analysis. The analysis of the relationships between the parameters characterizing the physical fitness of frogs and the indicator of developmental stability - the FAMI index - did not establish statistically significant correlations in the analyses in the whole groups of P. ridibundus from each site and in the correlations between sexes. We believe that the approaches to the study of developmental stability (analysis of fluctuating asymmetry levels) and those related to the assessment of physical fitness (health status) of frogs should be applied independently of each other.
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Affiliation(s)
- Zhivko Zhelev
- Faculty of Biology, Department of Zoology, University of Plovdiv "Paisii Hilendarski, " 24 Tsar Assen Str, 4000, Plovdiv, Bulgaria
| | - Stefan Tsonev
- Functional Genetics, AgroBioInstitute, 8 Dragan Tsankov Blvd, 1164, Sofia, Bulgaria
| | - Ivelin Mollov
- Faculty of Biology, Department of Ecology and Environmental Conservation, University of Plovdiv "Paisii Hilendarski, " 24 Tzar Asen Str, 4000, Plovdiv, Bulgaria.
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Fluctuating asymmetry as an indicator of stress. Emerg Top Life Sci 2022; 6:295-301. [PMID: 35788314 DOI: 10.1042/etls20210274] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Revised: 05/11/2022] [Accepted: 05/17/2022] [Indexed: 01/23/2023]
Abstract
Fluctuating asymmetry as a special kind of asymmetry can be defined as deviations from a known predetermined ratio of the parts of morphological structure under study. As a special type of phenotypic variability fluctuating asymmetry is a manifestation of ontogenetic noise or developmental variability. This type of variability is ubiquitous and plays a significant role in the observed phenotypic diversity. The level of fluctuating asymmetry turns out to be an indicator of optimal developmental conditions and genetic coadaptation. It is also considered as a parameter of fitness. Thus, fluctuating asymmetry acts as a measure of developmental stability in developmental biology and as a measure of population condition in population biology.
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Caccavo A, Lemos H, Maroja LS, Gonçalves PR. Does stress mess with rodents' heads? Influence of habitat amount and genetic factors in mandible fluctuating asymmetry in South American water rats ( Nectomys squamipes, Sigmodontinae) from Brazilian Atlantic rainforest remnants. Ecol Evol 2021; 11:7080-7092. [PMID: 34141277 PMCID: PMC8207160 DOI: 10.1002/ece3.7557] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 03/23/2021] [Accepted: 03/26/2021] [Indexed: 11/20/2022] Open
Abstract
Loss of developmental stability can lead to deviations from bilateral symmetry (i.e. Fluctuating Asymmetry - FA), and is thought to be caused by environmental and genetic factors associated with habitat loss and stress. Therefore, levels of FA might be a valuable tool to monitor wild populations if FA serves as an indicator of exposure to stress due to impacts of habitat loss and fragmentation. In studies examining FA and habitat fragmentation, FA levels are often explained by loss of genetic variation, though few studies have addressed FA's use as indicator of environmental impact. Here, we investigated whether habitat loss, genetic variation, and/or inbreeding affect the developmental instability in Brazilian Atlantic forest populations of a Neotropical water rat (Nectomys squamipes). We sampled individuals from eight sites within Atlantic forest remnants with different amounts of available forest habitat and assessed FA levels with geometric morphometric techniques using adult mandibles. We used observed heterozygosity (Ho) and inbreeding coefficient (Fis), from seven microsatellite markers, as a proxy of genetic variation at individual and population levels. Populations were not significantly different for shape or size FA levels. Furthermore, interindividual variation in both shape and size FA levels and interpopulational differences in size FA levels were best explained by chance. However, habitat amount was negatively associated with both interpopulational variance and average shape FA levels. This association was stronger in populations living in areas with <28% of forest cover, which presented higher variance and higher average FA, suggesting that Nectomys squamipes might have a tolerance threshold to small availability of habitat. Our work is one of the first to use FA to address environmental stress caused by habitat loss in small mammal populations from a Neotropical biome. We suggest that shape FA might serve as a conservation tool to monitor human impact on natural animal populations.
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Affiliation(s)
- Aldo Caccavo
- Programa de Pós‐Graduação em Ciências Ambientais e ConservaçãoPPGCiAC ‐ Instituto de Biodiversidade e Sustentabilidade NUPEMUniversidade Federal do Rio de JaneiroMacaéBrazil
- Setor de MastozoologiaDepartamento de VertebradosMuseu NacionalUniversidade Federal do Rio de JaneiroRio de JaneiroBrazil
- Museu de História Natural do Ceará Prof. Dias da RochaCentro de Ciências da SaúdeUniversidade Estadual do CearáCearáBrazil
| | - Hudson Lemos
- Programa de Pós‐Graduação em Ciências Ambientais e ConservaçãoPPGCiAC ‐ Instituto de Biodiversidade e Sustentabilidade NUPEMUniversidade Federal do Rio de JaneiroMacaéBrazil
| | | | - Pablo Rodrigues Gonçalves
- Instituto de Biodiversidade e Sustentabilidade NUPEMUniversidade Federal do Rio de JaneiroMacaéBrazil
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Fluctuating Asymmetry, Developmental Noise and Developmental Stability: Future Prospects for the Population Developmental Biology Approach. Symmetry (Basel) 2020. [DOI: 10.3390/sym12081376] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Developmental noise—which level may vary within a certain backlash allowed by natural selection—is a reflection of the state of a developing system or developmental stability. Phenotypic variations inside the genetically determined norm observed in case of fluctuating asymmetry provide a unique opportunity for evaluating this form of ontogenetic variability. Low levels of developmental noise for the biologic system under study is observed under certain conditions, while its increase acts as a measure of stress. The concordance of changes in developmental stability with changes in other parameters of developmental homeostasis indicates the significance of fluctuating asymmetry estimates. All this determines the future prospects of the study of fluctuating asymmetry not only for developmental biology, but also for population biology. The study of developmental stability may act as the basis of an approach of population developmental biology to assess the nature of the phenotypic diversity and the state of natural populations under various impacts and during evolutionary transformations.
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Fluctuating Asymmetry in Morphological Characteristics of Betula Pendula Roth Leaf under Conditions of Urban Ecosystems: Evaluation of the Multi-Factor Negative Impact. Symmetry (Basel) 2020. [DOI: 10.3390/sym12081317] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
The fluctuating asymmetry (FA) in Betula pendula Roth was estimated as an integrated measure of five morphometric characteristics of a lamina. Samples were collected in seven cities that differ both in climatic conditions, moderately to sharply continental. In total, 33 ecotopes were distinguished with various level of anthropogenic load. The statistical data processing involved correlation, one-way and factorial ANOVA, regression analyses, and principal component analysis (PCA). The impact of 25 climatic and anthropogenic factors on the FA value was considered. In most urban ecotopes, the integrated fluctuating asymmetry (IFA) value was higher than in natural biotopes of the same region. No significant inter-annual differences in IFA values were found. FA dependence on traffic load is noted to be statistically significant. The covariation analysis of IFA, climatic, and anthropogenic variables in various urban ecotopes revealed the impact of three groups of factors that together explain 93% of the variance in environmental parameters. The complex analysis clearly arranged the studied ecotopes by pollution gradient and climatic patterns. The primary effect of the total anthropogenic load on the developmental stability of B. pendula results in an IFA increase. IFA can play a key role in bioindication assessment of environmental quality. The climatic factors have no significant effect on the developmental stability of B. pendula in urban conditions.
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Functional Asymmetry and Fingerprint Features of Left-Handed and Right-Handed Young Yakuts (Mongoloid Race, North-Eastern Siberia). Symmetry (Basel) 2018. [DOI: 10.3390/sym10120728] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
An ethnically homogeneous group of Yakuts (Mongoloid race, Northeast Asia), aged 18–31, was studied to characterize the diversity of particular features between left- and right-handed individuals. A total of 52 left-handed (32 women and 20 men) and 100 right-handed (50 women and 50 men) individuals were studied. Testing included two sets of questions and tasks, dynamometry of the right and left hand, and fingerprint analysis. Left-handed and right-handed people were found to differ in functional asymmetry of psychophysiological and motor reactions. Right-handers were characterized by higher intragroup similarity, while, among left-handers, greater dispersion of these traits was observed. Asymmetry in hand grip strength was less pronounced in the left-handed people than in the right-handed; this difference was statistically significant, and the difference was greater in men than in women. This suggests that the non-dominant hand in the left-handed people was subjected to a greater load and indicates the forced adaptation of the left-handed people to “dextrastress”. No significant difference between sexes was found when analyzing fingerprint patterns. Left-handers had arches significantly more often than right-handers. Radial loops were most often found on the index finger, and, in the left-handers, their occurrence was significantly higher on three to five fingers of the left hand compared with the right-handers. The levels of fluctuating asymmetry in left-handers and right-handers were similar.
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Shadrina EG, Vol’pert YL. Experience of applying plant and animal fluctuating asymmetry in assessment of environmental quality in terrestrial ecosystems: Results of 20-year studies of wildlife and anthropogenically transformed territories. Russ J Dev Biol 2018. [DOI: 10.1134/s1062360418010058] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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