Effects of Lactobacillus rhamnosus and Enterococcus faecalis Supplementation as Direct-Fed Microbials on Rumen Microbiota of Boer and Speckled Goat Breeds

Research progress in isolation and identification of rumen probiotics

With the increasing research on the exploitation of rumen microbial resources, rumen probiotics have attracted much attention for their positive contributions in promoting nutrient digestion, inhibiting pathogenic bacteria, and improving production performance. In the past two decades, macrogenomics has provided a rich source of new-generation probiotic candidates, but most of these "dark substances" have not been successfully cultured due to the restrictive growth conditions. However, fueled by high-throughput culture and sorting technologies, it is expected that the potential probiotics in the rumen can be exploited on a large scale, and their potential applications in medicine and agriculture can be explored. In this paper, we review and summarize the classical techniques for isolation and identification of rumen probiotics, introduce the development of droplet-based high-throughput cell culture and single-cell sequencing for microbial culture and identification, and finally introduce promising cultureomics techniques. The aim is to provide technical references for the development of related technologies and microbiological research to promote the further development of the field of rumen microbiology research.

Effects of probiotic and yeast extract supplementation on oxidative stress, inflammatory response, and growth in weaning Saanen kids

This study aimed to investigate the effects of probiotic and yeast extract supplementation on the metabolic, immune, and oxidative status of Sannen goat kids during the weaning challenge. Forty goat kids were randomly assigned to four groups: a probiotic group (Pr) (basal diet + mixture of Bacillus subtilis, Bacillus lechiniformis, Streptococcus Thermophilis, and Enterococcus faecium), a yeast cell wall extract group (YC) (basal diet + Saccharomyces cerevisiae), a probiotic and yeast cell wall extract group (Pr + YC) (basal diet + mixture of probiotic and yeast cell wall extract), and a control group (basal diet). Treatments were administered 21 days prior to weaning (80 ± 2 days of life) until 21 days post-weaning except for the control group. Blood samples were collected at four different time points, including 21 days before weaning, 2 days post-weaning (weaning time), 7 days post-weaning, and 21 days post-weaning. Average levels of triiodothyronine, thyroxine, total protein (TP), albumin, globulin, blood urea nitrogen (BUN), total antioxidant capacity (TAC), serum adenosine deaminase (ADA), nitric oxide (NO), ferritin, glucose, cortisol, triglyceride, non-esterified fatty acid (NEFA), Β-hydroxybutyric acid (BHBA), and body weight were measured. The average levels of cortisol tended to be higher in the Pr group in comparison to the control group (P = 0.07) and the Pr + YC group (P = 0.10). NEFA was found to be higher and tended to be higher in the control group compared to the Pr + YC group (P > 0.001) and Pr group (P = 0.10), respectively. Additionally, the BHBA concentration was higher in the control group compared to the Pr group (P > 0.001). No differences were observed in the concentration of other measured parameters among the treatments. The concentration of cortisol tended to be higher (P = 0.10) at the weaning time as compared to the third sampling time. Furthermore, the concentration of TAC was observed to be higher (P > 0.01) at the weaning time in comparison to the third and fourth sampling times. The concentration of NO was higher (P > 0.01) at the third sampling time when compared to the first sampling time. A reduction in NEFA and BHBA levels may suggest an improvement in the metabolic status of the supplemented animals during the weaning challenge. However, supplementation with probiotics and yeast cell wall extract did not appear to have an effect on the oxidative status of the animals. The increase in TAC and NO levels observed during the weaning time may indicate an increase in oxidative stress during this period.

'Multi-omics' data integration: applications in probiotics studies

The concept of probiotics is witnessing increasing attention due to its benefits in influencing the host microbiome and the modulation of host immunity through the strengthening of the gut barrier and stimulation of antibodies. These benefits, combined with the need for improved nutraceuticals, have resulted in the extensive characterization of probiotics leading to an outburst of data generated using several 'omics' technologies. The recent development in system biology approaches to microbial science is paving the way for integrating data generated from different omics techniques for understanding the flow of molecular information from one 'omics' level to the other with clear information on regulatory features and phenotypes. The limitations and tendencies of a 'single omics' application to ignore the influence of other molecular processes justify the need for 'multi-omics' application in probiotics selections and understanding its action on the host. Different omics techniques, including genomics, transcriptomics, proteomics, metabolomics and lipidomics, used for studying probiotics and their influence on the host and the microbiome are discussed in this review. Furthermore, the rationale for 'multi-omics' and multi-omics data integration platforms supporting probiotics and microbiome analyses was also elucidated. This review showed that multi-omics application is useful in selecting probiotics and understanding their functions on the host microbiome. Hence, recommend a multi-omics approach for holistically understanding probiotics and the microbiome.

Glycyrrhinic acid and probiotics alleviate deoxynivalenol-induced cytotoxicity in intestinal epithelial cells

Deoxynivalenol (DON) is one of the most prevalent mycotoxin contaminants, which posing a serious health threat to animals and humans. Previous studies have found that individually supplemented probiotic or glycyrrhinic acid (GA) could degrade DON and alleviate DON-induced cytotoxicity. The present study investigated the effect of combining GA with Saccharomyces cerevisiae (S. cerevisiae) and Enterococcus faecalis (E. faecalis) using orthogonal design on alleviating IPEC-J2 cell damage induced by DON. The results showed that the optimal counts of S. cerevisiae and E. faecalis significantly promoted cell viability. The optimal combination for increasing cell viability was 400 µg/mL GA, 1 × 10⁶ CFU/mL S. cerevisiae and 1 × 10⁶ CFU/mL E. faecalis to make GAP, which not only significantly alleviated the DON toxicity but also achieved the highest degradation rate of DON (34.7%). Moreover, DON exposure significantly increased IL-8, Caspase3 and NF-κB contents, and upregulated the mRNA expressions of Bax, Caspase 3, NF-κB and the protein expressions of Bax, TNF-α and COX-2. However, GAP addition significantly reduced aforementioned genes and proteins. Furthermore, GAP addition significantly increased the mRNA expressions of Claudin-1, Occludin, GLUT2 and ASCT2, and the protein expressions of ZO-1, Claudin-1 and PePT1. It was inferred that the combination of GA, S. cerevisiae, and E. faecalis had the synergistic effect on enhancing cell viability and DON degradation, which could protect cells from DON-induced damage by reducing DON cytotoxicity, alleviating cell apoptosis and inflammation via inhibiting NF-κB signaling pathway, improving intestinal barrier function, and regulating nutrient absorption and transport. These findings suggest that GAP may have potential as a dietary supplement for livestock or humans exposed to DON-contaminated food or feed.

Corn Straw Total Mix Dietary Supplementation of Bacillus Subtilis-Enhanced Growth Performance of Lambs by Favorably Modulating Rumen Bacterial Microbiome

In this experiment, B. subtilis was added to pelletized straw-based total mixed ration, and the rumen microbial diversity of house-fed Duhan hybrid sheep was compared. Ten 3-month-old weaned Duhan hybrid lambs were separated into two groups and fattened for 80 days using a single-factor trial design. During the fattening period, the control and the experiment groups were fed with the same ration, except that the experiment group was supplemented with B. subtilis. The results showed that the addition of B. subtilis could significantly increase the daily weight gain, total weight gain, rumen microbial abundance, and rumen microbial diversity of the Duhan lamb. Among them, the proportion of microbial flora such as Bacteroidetes was significantly increased, producing more acetate, iso-butyrate, and butyrate, obtaining higher energy efficiency.