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Grau BW, Kumar P, Nilsen A, Malhotra SV. Nitrogen-bridgehead compounds: overview, synthesis, and outlook on applications. Org Biomol Chem 2025; 23:1479-1532. [PMID: 39623962 DOI: 10.1039/d4ob01589d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/13/2025]
Abstract
The nitrogen-bridgehead is a common structural motif present in a multitude of natural products. As many of these abundant compounds exhibit biological activities, e.g. against cancer or bacteria, these derivatives are of high interest. While natural products are often associated with problematic characteristics, such as elaborate separation processes, high molecular complexity and limited room for derivatization, purely synthetic approaches can overcome these challenges. Many synthetic procedures have been reported for preparation of artificial nitrogen bridgehead compounds, however, to our surprise only a fraction of these has been tested for their bioactivity. This review is therefore meant to give an overview of existing synthetic methods that provide scaffolds containing bridgehead nitrogen atoms, covering the period from 2000 to 2023. Reviews which cover subunits of this topic are referenced as well.
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Affiliation(s)
- Benedikt W Grau
- Department of Cell, Development and Cancer Biology, Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.
- Center for Experimental Therapeutics, Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA
| | - Praveen Kumar
- Department of Cell, Development and Cancer Biology, Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.
- Center for Experimental Therapeutics, Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA
| | - Aaron Nilsen
- Department of Chemical Physiology and Biochemistry, Oregon Health & Science University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, USA
| | - Sanjay V Malhotra
- Department of Cell, Development and Cancer Biology, Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.
- Center for Experimental Therapeutics, Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA
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Hu Y, Yu HB, Tian Y, Xie MS, Guo HM. Copper(II)-Catalyzed Asymmetric (3+3) Annulation of Diaziridines with Oxiranes. Org Lett 2025; 27:1310-1315. [PMID: 39878925 DOI: 10.1021/acs.orglett.5c00064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2025]
Abstract
Highly asymmetric (3+3) annulation of diaziridines with oxiranes via C-N bond cleavage in diaziridine was achieved under 10 mol % of chiral copper(II) complex as the catalyst under mild reaction conditions. With Cu(OTf)2 as the Lewis acid and C1-symmetric imidazolidine-pyrroloimidazolone pyridine as the ligand, diverse tetrahydro-[1,3,4]-oxadiazines were obtained by stereospecific C-N/C-O bond formation in moderate to good yields (up to 93% yield) and high diastereo- (>20:1 dr) and enantioselectivities (up to 92% ee). The catalytic cycle and stereochemical model were proposed by DFT calculation.
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Affiliation(s)
- Ying Hu
- State Key Laboratory of Antiviral Drugs, Pingyuan Laboratory, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, School of Chemistry and Chemical Engineering, Henan Normal University, Xinxiang, Henan 453007, China
| | - Heng-Bin Yu
- State Key Laboratory of Antiviral Drugs, Pingyuan Laboratory, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, School of Chemistry and Chemical Engineering, Henan Normal University, Xinxiang, Henan 453007, China
| | - Yin Tian
- State Key Laboratory of Southwestern Chinese Medicine Resources, School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China
| | - Ming-Sheng Xie
- State Key Laboratory of Antiviral Drugs, Pingyuan Laboratory, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, School of Chemistry and Chemical Engineering, Henan Normal University, Xinxiang, Henan 453007, China
| | - Hai-Ming Guo
- State Key Laboratory of Antiviral Drugs, Pingyuan Laboratory, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, School of Chemistry and Chemical Engineering, Henan Normal University, Xinxiang, Henan 453007, China
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Stoikov II, Antipin IS, Burilov VA, Kurbangalieva AR, Rostovskii NV, Pankova AS, Balova IA, Remizov YO, Pevzner LM, Petrov ML, Vasilyev AV, Averin AD, Beletskaya IP, Nenajdenko VG, Beloglazkina EK, Gromov SP, Karlov SS, Magdesieva TV, Prishchenko AA, Popkov SV, Terent’ev AO, Tsaplin GV, Kustova TP, Kochetova LB, Magdalinova NA, Krasnokutskaya EA, Nyuchev AV, Kuznetsova YL, Fedorov AY, Egorova AY, Grinev VS, Sorokin VV, Ovchinnikov KL, Kofanov ER, Kolobov AV, Rusinov VL, Zyryanov GV, Nosov EV, Bakulev VA, Belskaya NP, Berezkina TV, Obydennov DL, Sosnovskikh VY, Bakhtin SG, Baranova OV, Doroshkevich VS, Raskildina GZ, Sultanova RM, Zlotskii SS, Dyachenko VD, Dyachenko IV, Fisyuk AS, Konshin VV, Dotsenko VV, Ivleva EA, Reznikov AN, Klimochkin YN, Aksenov DA, Aksenov NA, Aksenov AV, Burmistrov VV, Butov GM, Novakov IA, Shikhaliev KS, Stolpovskaya NV, Medvedev SM, Kandalintseva NV, Prosenko OI, Menshchikova EB, Golovanov AA, Khashirova SY. Organic Chemistry in Russian Universities. Achievements of Recent Years. RUSSIAN JOURNAL OF ORGANIC CHEMISTRY 2024; 60:1361-1584. [DOI: 10.1134/s1070428024080013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2024] [Revised: 03/28/2024] [Accepted: 03/31/2024] [Indexed: 01/06/2025]
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Lukyanova VA, Kuznetsov VV, Konstantinova NM, Dmitrenok AS, Kosaya MP, Dorofeeva OV, Druzhinina AI. Enthalpy of formation of 6-phenyl-1,5-diazabicyclo[3.1.0]hexane by combustion calorimetry and theoretical approach for efficient prediction of thermochemistry of diaziridines. Phys Chem Chem Phys 2023; 25:25289-25298. [PMID: 37701931 DOI: 10.1039/d3cp03290f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/14/2023]
Abstract
The combustion energy and standard molar enthalpy of formation of crystalline 6-phenyl-1,5-diazabicyclo[3.1.0]hexane (PDABH) were determined using an isoperibolic calorimeter with a static bomb. PDABH is the first diaziridine for which the experimental value of the enthalpy of formation was obtained. This value was validated by the theoretical values of gas phase enthalpy of formation and enthalpy of sublimation. The gas phase enthalpy of formation was calculated using the DLPNO-CCSD(T1)/CBS method in conjunction with isodesmic-type reactions. This method was chosen in comparison to another high quality evaluative method (G4), which has been shown to provide unreliable results for cyclic nitrogen containing compounds. The descriptors of the molecular electrostatic potential (MEP) were used to estimate the enthalpy of sublimation of PDABH. The proposed MEP model is based on experimental enthalpies of sublimation for 75 compounds structurally similar to PDABH. The high-level ab initio calculations of gas phase enthalpies of formation combined with enthalpies of sublimations estimated using descriptors of MEP allow predicting the enthalpies of formation of diaziridines in the solid phase.
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Affiliation(s)
- Vera A Lukyanova
- Department of Chemistry, M. V. Lomonosov Moscow State University, 119991 Moscow, Russia.
| | - Vladimir V Kuznetsov
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 119991 Moscow, Russia
| | | | - Andrey S Dmitrenok
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 119991 Moscow, Russia
| | - Maria P Kosaya
- Department of Chemistry, M. V. Lomonosov Moscow State University, 119991 Moscow, Russia.
| | - Olga V Dorofeeva
- Department of Chemistry, M. V. Lomonosov Moscow State University, 119991 Moscow, Russia.
| | - Anna I Druzhinina
- Department of Chemistry, M. V. Lomonosov Moscow State University, 119991 Moscow, Russia.
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Belyakov AV, Kuznetsov VV, Shimanskaya GS, Rykov AN, Goloveshkin AS, Novakovskaya YV, Shishkov IF. Molecular structure of 1,1',6,6'-tetraaza-7,7'-bi(bicyclo[4.1.0]heptane) in gas, solid and solution phases: GED, XRD and NMR data combined with quantum chemical calculations. MENDELEEV COMMUNICATIONS 2023. [DOI: 10.1016/j.mencom.2023.01.030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
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6
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Penney AA, Efremova MM, Molchanov AP, Kryukova MA, Kudinov AY, Bunev AS, Keresten VM, Kuznetsov MA. 1,3‐Dipolar
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Nucleophilic Reactivity of Diaziridines Based on 3,4‐Dihydroisoquinoline toward Aryl Iso(thio)cyanates. ChemistrySelect 2022. [DOI: 10.1002/slct.202202627] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Alexander A. Penney
- Saint Petersburg State University, Institute of Chemistry Universitetsky pr. 26 Saint Petersburg 198504 Russian Federation
| | - Mariia M. Efremova
- Saint Petersburg State University, Institute of Chemistry Universitetsky pr. 26 Saint Petersburg 198504 Russian Federation
| | - Alexander P. Molchanov
- Saint Petersburg State University, Institute of Chemistry Universitetsky pr. 26 Saint Petersburg 198504 Russian Federation
| | - Mariya A. Kryukova
- Saint Petersburg State University, Institute of Chemistry Universitetsky pr. 26 Saint Petersburg 198504 Russian Federation
| | - Andrey Yu. Kudinov
- Togliatti State University Medicinal Chemistry Center Belorusskaya st. 14 Togliatti 445020 Russian Federation
| | - Alexander S. Bunev
- Togliatti State University Medicinal Chemistry Center Belorusskaya st. 14 Togliatti 445020 Russian Federation
| | - Valentina M. Keresten
- Saint Petersburg State University, Institute of Chemistry Universitetsky pr. 26 Saint Petersburg 198504 Russian Federation
| | - Mikhail A. Kuznetsov
- Saint Petersburg State University, Institute of Chemistry Universitetsky pr. 26 Saint Petersburg 198504 Russian Federation
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Kuznetsov V, Khakimov D, Dmitrenok A, Goloveshkin A. Synthesis, structure and peculiarity of conformational behavior of 1,5-diazabicyclo[3.1.0]hexanes. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Tachrim ZP, Wang L, Murai Y, Hashimoto M. New Trends in Diaziridine Formation and Transformation (a Review). Molecules 2021; 26:4496. [PMID: 34361648 PMCID: PMC8348119 DOI: 10.3390/molecules26154496] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Revised: 07/19/2021] [Accepted: 07/20/2021] [Indexed: 01/18/2023] Open
Abstract
This review focuses on diaziridine, a high strained three-membered heterocycle with two nitrogen atoms that plays an important role as one of the most important precursors of diazirine photoaffinity probes, as well as their formation and transformation. Recent research trends can be grouped into three categories, based on whether they have examined non-substituted, N-monosubstituted, or N,N-disubstituted diaziridines. The discussion expands on the conventional methods for recent applications, the current spread of studies, and the unconventional synthesis approaches arising over the last decade of publications.
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Affiliation(s)
- Zetryana Puteri Tachrim
- Division of Applied Bioscience, Graduate School of Agriculture, Hokkaido University, Kita 9, Nishi 9, Kita-ku, Sapporo 060-8589, Japan; (L.W.); (Y.M.)
- Research Center for Chemistry, Indonesian Institute of Sciences, Kawasan Puspiptek, Serpong, South Tangerang 15314, Banten, Indonesia
| | - Lei Wang
- Division of Applied Bioscience, Graduate School of Agriculture, Hokkaido University, Kita 9, Nishi 9, Kita-ku, Sapporo 060-8589, Japan; (L.W.); (Y.M.)
- State Key Laboratory of Fine Chemicals, Department of Pharmacy, School of Chemical Engineering, Dalian University of Technology, Dalian 116024, China
| | - Yuta Murai
- Division of Applied Bioscience, Graduate School of Agriculture, Hokkaido University, Kita 9, Nishi 9, Kita-ku, Sapporo 060-8589, Japan; (L.W.); (Y.M.)
- Frontier Research Center for Post-Genome Science and Technology, Faculty of Advanced Life Science, Hokkaido University, Kita 21, Nishi 11, Kita-ku, Sapporo 001-0021, Japan
| | - Makoto Hashimoto
- Division of Applied Bioscience, Graduate School of Agriculture, Hokkaido University, Kita 9, Nishi 9, Kita-ku, Sapporo 060-8589, Japan; (L.W.); (Y.M.)
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