1
|
Medgyesi Z, Mika LT. Characterization and Application of Cyrene as a Biomass-Based Solvent for Homogeneous Heck-Coupling Reaction. Chempluschem 2024; 89:e202400379. [PMID: 38980081 DOI: 10.1002/cplu.202400379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 07/04/2024] [Accepted: 07/09/2024] [Indexed: 07/10/2024]
Abstract
Cyrene, a renewable, non-toxic substance having negligible vapor pressure, even at high temperatures, was proposed as a reaction medium for homogeneous Pd-catalyzed Heck-coupling reactions. It was first characterized by its temperature-dependent physicochemical properties, i. e., vapor pressure, density, surface tension, heat capacity, and viscosity, the key parameters of its reaction and process chemistry. Its refractive indices in the function of temperature were also determined. Hereafter, the effect of reaction parameters (Pd source, nature of the base, the water content of the reaction mixture, leaving group (-I, -Br, -Cl, and -OTf of aromatic substrates) on Pd-catalyzed Heck-coupling reaction was investigated using iodobenzene and styrene as model substrates. Subsequently, 4-substituted iodobenzene and styrene derivatives were applied to investigate the effect of electronic parameters on the reaction efficiency and functional group tolerance. To demonstrate the applicability of the system, thirteen stilbene derivatives were isolated with good to high yields and purity (>95 %) using 0.2 mol % of Pd, 1.5 eq. of Et3N as a base, in 1 mL of Cyrene for 2 h at 100 °C.
Collapse
Affiliation(s)
- Zoltán Medgyesi
- Department of Chemical and Environmental Process Engineering, Faculty of Chemical Technology and Biotechnology, Budapest University of Technology and Economics, Műegyetem rkp. 3., H-1111, Budapest, Hungary
| | - László T Mika
- Department of Chemical and Environmental Process Engineering, Faculty of Chemical Technology and Biotechnology, Budapest University of Technology and Economics, Műegyetem rkp. 3., H-1111, Budapest, Hungary
| |
Collapse
|
2
|
Vinoth Kumar P, Shobika M, Roopan SM, Madhumitha G. A mini review: Recent progress in light-mediated synthesis of carbon–carbon bonded stilbene analogues. Tetrahedron 2023. [DOI: 10.1016/j.tet.2023.133341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2023]
|
3
|
Luo W, Luo K, Yang Y, Lin X, Li P, Wen Y. N-maleyl chitosan-supported palladium catalyst for Heck coupling reaction and reduction of 4-nitrophenol. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.129852] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
|
4
|
Saranya PV, Aneeja T, Anilkumar G. Palladium‐catalyzed difluoromethylation and difluoroalkylation reactions: An overview. Appl Organomet Chem 2021. [DOI: 10.1002/aoc.6503] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
|
5
|
Bizzarri BM, Fanelli A, Botta L, Zippilli C, Cesarini S, Saladino R. Dendrimeric Structures in the Synthesis of Fine Chemicals. MATERIALS (BASEL, SWITZERLAND) 2021; 14:5318. [PMID: 34576547 PMCID: PMC8471025 DOI: 10.3390/ma14185318] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 08/30/2021] [Accepted: 09/09/2021] [Indexed: 12/13/2022]
Abstract
Dendrimers are highly branched structures with a defined shape, dimension, and molecular weight. They consist of three major components: the central core, branches, and terminal groups. In recent years, dendrimers have received great attention in medicinal chemistry, diagnostic field, science of materials, electrochemistry, and catalysis. In addition, they are largely applied for the functionalization of biocompatible semiconductors, in gene transfection processes, as well as in the preparation of nano-devices, including heterogeneous catalysts. Here, we describe recent advances in the design and application of dendrimers in catalytic organic and inorganic processes, sustainable and low environmental impact, photosensitive materials, nano-delivery systems, and antiviral agents' dendrimers.
Collapse
Affiliation(s)
- Bruno Mattia Bizzarri
- Biological and Ecological Sciences Department (DEB), University of Tuscia, 01100 Viterbo, Italy; (A.F.); (L.B.); (C.Z.); (S.C.)
| | | | | | | | | | - Raffaele Saladino
- Biological and Ecological Sciences Department (DEB), University of Tuscia, 01100 Viterbo, Italy; (A.F.); (L.B.); (C.Z.); (S.C.)
| |
Collapse
|
6
|
Li D, Tian Q, Wang X, Wang Q, Wang Y, Liao S, Xu P, Huang X, Yuan J. N-Heterocyclic carbene palladium (II)-pyridine (NHC-Pd (II)-Py) complex catalyzed heck reactions. SYNTHETIC COMMUN 2021. [DOI: 10.1080/00397911.2021.1919711] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Dan Li
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Qingqiang Tian
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Xuetong Wang
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Qiang Wang
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Yin Wang
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Siwei Liao
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Ping Xu
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Xin Huang
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| | - Jianyong Yuan
- Department of Medicinal Chemistry, College of Pharmacy, Chongqing Medical University, Chongqing, PR China
| |
Collapse
|
7
|
Rayadurgam J, Sana S, Sasikumar M, Gu Q. Palladium catalyzed C–C and C–N bond forming reactions: an update on the synthesis of pharmaceuticals from 2015–2020. Org Chem Front 2021. [DOI: 10.1039/d0qo01146k] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Some of the most prominent and promising catalysts in organic synthesis for the requisite construction of C–C and C–N bonds are palladium (Pd) catalysts, which play a pivotal role in pharmaceutical and medicinal chemistry.
Collapse
Affiliation(s)
- Jayachandra Rayadurgam
- Research Center for Drug Discovery
- School of Pharmaceutical Sciences
- Sun Yat-Sen University
- Guangzhou 510006
- People's Republic of China
| | - Sravani Sana
- Alder Research Chemicals Private Limited
- CSIR-IICT
- Hyderabad
- India
| | - M. Sasikumar
- Department of Chemistry
- Indian Institute of Science Education and Research
- Tirupati
- India
| | - Qiong Gu
- Research Center for Drug Discovery
- School of Pharmaceutical Sciences
- Sun Yat-Sen University
- Guangzhou 510006
- People's Republic of China
| |
Collapse
|
8
|
Niknam E, Moaddeli A, Khalafi-Nezhad A. Palladium anchored on guanidine-terminated magnetic dendrimer (G3-Gu-Pd): An efficient nano-sized catalyst for phosphorous-free Mizoroki-Heck and copper-free Sonogashira couplings in water. J Organomet Chem 2020. [DOI: 10.1016/j.jorganchem.2020.121369] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
|
9
|
Chopra J, Goswami AK, Baroliya PK. An Overview of Solid Supported Palladium and Nickel Catalysts for C-C Cross Coupling Reactions. MINI-REV ORG CHEM 2020. [DOI: 10.2174/1570193x16666190617160339] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Solid supported catalysts have been of considerable interest in organic synthesis for the
last few years. Solid support provides an efficient heterogeneous catalytic system owing to facile
recovery and extensive recycling by simple filtration because of possessing 3-R approach (Recoverable,
Robust and Recyclable) and makes solid supported catalyst more appealing nowadays. In view
of the high cost and shortage of furthermost used palladium catalyst, its recovery and recycling are
vital issues for any large-scale application which are being overcome by using solid supported
catalytic systems. Therefore, a variety of inorganic and organic solid-supported catalytic systems
have been developed so far in order to address these challenges. This review attempts highlight a
number of solid supported catalytic systems in the pro-active area of widely used C-C cross coupling
reactions.
Collapse
Affiliation(s)
- Jaishri Chopra
- Coordination Chemistry Lab, Department of Chemistry, Mohanlal Sukhadia University, Udaipur (Rajasthan) - 313001, India
| | - Ajay K. Goswami
- Coordination Chemistry Lab, Department of Chemistry, Mohanlal Sukhadia University, Udaipur (Rajasthan) - 313001, India
| | - Prabhat K. Baroliya
- Coordination Chemistry Lab, Department of Chemistry, Mohanlal Sukhadia University, Udaipur (Rajasthan) - 313001, India
| |
Collapse
|
10
|
Ryu JH, Lee GJ, Shih YRV, Kim TI, Varghese S. Phenylboronic Acid-polymers for Biomedical Applications. Curr Med Chem 2019; 26:6797-6816. [DOI: 10.2174/0929867325666181008144436] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2018] [Revised: 09/24/2018] [Accepted: 09/26/2018] [Indexed: 02/08/2023]
Abstract
Background:
Phenylboronic acid-polymers (PBA-polymers) have attracted tremendous
attention as potential stimuli-responsive materials with applications in drug-delivery
depots, scaffolds for tissue engineering, HIV barriers, and biomolecule-detecting/sensing platforms.
The unique aspect of PBA-polymers is their interactions with diols, which result in reversible,
covalent bond formation. This very nature of reversible bonding between boronic
acids and diols has been fundamental to their applications in the biomedical area.
Methods:
We have searched peer-reviewed articles including reviews from Scopus, PubMed,
and Google Scholar with a focus on the 1) chemistry of PBA, 2) synthesis of PBA-polymers,
and 3) their biomedical applications.
Results:
We have summarized approximately 179 papers in this review. Most of the applications
described in this review are focused on the unique ability of PBA molecules to interact
with diol molecules and the dynamic nature of the resulting boronate esters. The strong sensitivity
of boronate ester groups towards the surrounding pH also makes these molecules
stimuli-responsive. In addition, we also discuss how the re-arrangement of the dynamic boronate
ester bonds renders PBA-based materials with other unique features such as self-healing
and shear thinning.
Conclusion:
The presence of PBA in the polymer chain can render it with diverse functions/
relativities without changing their intrinsic properties. In this review, we discuss the development
of PBA polymers with diverse functions and their biomedical applications with a
specific focus on the dynamic nature of boronate ester groups.
Collapse
Affiliation(s)
- Ji Hyun Ryu
- Department of Orthopaedic Surgery, Duke University School of Medicine, Durham, North Carolina, NC 27703, United States
| | - Gyeong Jin Lee
- Department of Biosystems & Biomaterials Science and Engineering, College of Agriculture and Life Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
| | - Yu-Ru V. Shih
- Department of Orthopaedic Surgery, Duke University School of Medicine, Durham, North Carolina, NC 27703, United States
| | - Tae-il Kim
- Department of Biosystems & Biomaterials Science and Engineering, College of Agriculture and Life Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
| | - Shyni Varghese
- Department of Orthopaedic Surgery, Duke University School of Medicine, Durham, North Carolina, NC 27703, United States
| |
Collapse
|
11
|
Munir N, Masood S, Liaqat F, Tahir MN, Yousuf S, Kalsoom S, Mughal EU, Sumrra SH, Maalik A, Zafar MN. Synthesis of new Pro-PYE ligands as co-catalysts toward Pd-catalyzed Heck-Mizoroki cross coupling reactions. RSC Adv 2019; 9:37986-38000. [PMID: 35541803 PMCID: PMC9075740 DOI: 10.1039/c9ra07912b] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2019] [Accepted: 11/07/2019] [Indexed: 11/25/2022] Open
Abstract
The present research work describes the synthesis of five new ligands containing pyridinium amine, [H2L1][OTf]2-[H2L5][I]2 from two new precursors, [P3 Et][I] and [P2 Me][CF3SO3]. The structure elucidations of the compounds were confirmed by multinuclear NMR (1H, 13C), FT-IR and by single crystal XRD techniques. Theoretical DFT studies were carried out to get better insight into the electronic levels and structural features of all the molecules. These synthesized new Pro-PYE ligands [H2L1][OTf]2-[H2L5][I]2 were found to be significantly active as co-catalysts for Pd(CH3CO2)2 toward Heck-Mizoroki coupling reactions with wide substrate scope in the order of [H2L1][OTf]2 ≫ [H2L2][OTf]2 > [H2L3][OTf]2 > [H2L4][OTf]2 > [H2L5][I]2.
Collapse
Affiliation(s)
- Naima Munir
- Department of Chemistry, Quaid-i-Azam University Islamabad-45320 Pakistan +923314503061
| | - Sara Masood
- Department of Chemistry, Quaid-i-Azam University Islamabad-45320 Pakistan +923314503061
| | - Faroha Liaqat
- Department of Chemistry, Quaid-i-Azam University Islamabad-45320 Pakistan +923314503061
| | | | - Sammer Yousuf
- H. E. J. Research Institute of Chemistry, International Centre for Chemical and Biological Sciences, University of Karachi 75270 Pakistan
| | - Saima Kalsoom
- Centre for Interdisciplinary Research in Basic Sciences (CIRBS), International Islamic University Islamabad Pakistan
| | | | | | - Aneela Maalik
- Department of Chemistry, COMSATS University Islamabad, Islamabad Campus Park Road Islamabad-45550 Pakistan +923335490834
| | - Muhammad Naveed Zafar
- Department of Chemistry, Quaid-i-Azam University Islamabad-45320 Pakistan +923314503061
| |
Collapse
|
12
|
Mella C, Torres CC, Pecchi G, Campos CH. Mesoporous Palladium N,N'-Bis(3-Allylsalicylidene)o-Phenylenediamine-Methyl Acrylate Resins as Heterogeneous Catalysts for the Heck Coupling Reaction. MATERIALS (BASEL, SWITZERLAND) 2019; 12:ma12162612. [PMID: 31426313 PMCID: PMC6721152 DOI: 10.3390/ma12162612] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 08/12/2019] [Accepted: 08/14/2019] [Indexed: 06/10/2023]
Abstract
Palladium N,N'-bis(3-allylsalicylidene)o-phenylenediamine complex (PdAS) immobilized onto mesoporous polymeric methyl acrylate (MA) based resins (PdAS(x)-MA, x = 1, 2, 5, or 10 wt.%) were successfully prepared as heterogeneous catalysts for the Heck reaction. The catalysts were synthesized via radical suspension polymerization using PdAS as a metal chelate monomer, divinylbenzene and MA as co-monomers. The effect of the PdAS(x) content on the physicochemical properties of the resins is also reported. The catalysts were characterized by using a range of analytical techniques. The large surface area (>580 m2·g-1) and thermal stability (up to 250 °C) of the PdAS(x)-MA materials allows their application as catalysts in the C-C coupling reaction between iodobenzene and MA in the presence of trimethylamine at 120 °C using DMF as the solvent. The PdAS(10)-MA catalyst exhibited the highest catalytic performance with no significant catalytic loss being observed after five reuses, thereby indicating excellent catalyst stability in the reaction medium.
Collapse
Affiliation(s)
- Claudio Mella
- Depto. Físico-Química, Facultad de Ciencias Químicas, Universidad de Concepción, Edmundo Larenas 129, Concepción 4070371, Chile
| | - Cecilia C Torres
- Depto. de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andrés Bello, Sede Concepción, Autopista Concepción-Talcahuano 7100, Talcahuano 4300866, Chile
| | - Gina Pecchi
- Depto. Físico-Química, Facultad de Ciencias Químicas, Universidad de Concepción, Edmundo Larenas 129, Concepción 4070371, Chile
- Millenium Nuclei on Catalytic Processes towards Sustainable Chemistry (CSC), Santiago 8340518, Chile
| | - Cristian H Campos
- Depto. Físico-Química, Facultad de Ciencias Químicas, Universidad de Concepción, Edmundo Larenas 129, Concepción 4070371, Chile.
| |
Collapse
|
13
|
Ocansey E, Darkwa J, Makhubela BC. Bis(pyrazolyl)palladium(II) complexes as catalysts for Mizoroki–Heck cross-coupling reactions. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.03.030] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
|
14
|
Rong MK, Holtrop F, Slootweg JC, Lammertsma K. 1,3-P,N hybrid ligands in mononuclear coordination chemistry and homogeneous catalysis. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2018.08.016] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
|
15
|
Gallen A, Riera A, Verdaguer X, Grabulosa A. Coordination chemistry and catalysis with secondary phosphine oxides. Catal Sci Technol 2019. [DOI: 10.1039/c9cy01501a] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Review on synthesis, coordination chemistry and catalysis with secondary phosphine oxides.
Collapse
Affiliation(s)
- Albert Gallen
- Departament de Química Inorgànica i Orgànica
- Secció de Química Inorgànica
- Universitat de Barcelona
- Barcelona
- Spain
| | - Antoni Riera
- Institute for Research in Biomedicine (IRB-Barcelona)
- The Barcelona Institute of Science and Technology
- Barcelona 08028
- Spain
- Departament de Química Inorgànica i Orgànica
| | - Xavier Verdaguer
- Institute for Research in Biomedicine (IRB-Barcelona)
- The Barcelona Institute of Science and Technology
- Barcelona 08028
- Spain
- Departament de Química Inorgànica i Orgànica
| | - Arnald Grabulosa
- Departament de Química Inorgànica i Orgànica
- Secció de Química Inorgànica
- Universitat de Barcelona
- Barcelona
- Spain
| |
Collapse
|
16
|
Sabounchei SJ, Sedghi A, Hashemi A, Hosseinzadeh M, Bayat M, Gable RW. Pallada- and platinacycle complexes of phosphorus ylides; synthesis, X-ray characterization, theoretical and electrochemical studies and application of Pd(II) complexes as catalyst in Suzuki-Miyaura coupling reaction. Appl Organomet Chem 2017. [DOI: 10.1002/aoc.3850] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Asieh Sedghi
- Faculty of Chemistry; Bu-Ali Sina University; Hamedan 65174 Iran
| | - Ali Hashemi
- Faculty of Chemistry; Bu-Ali Sina University; Hamedan 65174 Iran
| | | | - Mehdi Bayat
- Faculty of Chemistry; Bu-Ali Sina University; Hamedan 65174 Iran
| | - Robert W. Gable
- School of Chemistry; University of Melbourne; Victoria 3010 Australia
| |
Collapse
|
17
|
Sabounchei SJ, Sayadi M, Bayat M, Sedghi A, Gable RW. Synthesis, X-ray structural and DFT studies of n-membered ring P, C-chelated complexes of Pd(II) and Pt(II) derived from unsymmetrical phosphorus ylides and application of Pd(II) complexes as catalyst in Suzuki reaction. J COORD CHEM 2017. [DOI: 10.1080/00958972.2017.1397640] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
| | - Mohsen Sayadi
- Faculty of Chemistry, Bu-Ali Sina University, Hamedan, Iran
| | - Mehdi Bayat
- Faculty of Chemistry, Bu-Ali Sina University, Hamedan, Iran
| | - Asiyeh Sedghi
- Faculty of Chemistry, Bu-Ali Sina University, Hamedan, Iran
| | - Robert W. Gable
- School of Chemistry, University of Melbourne, Melbourne, Australia
| |
Collapse
|
18
|
Javad Sabounchei S, Hashemi A, Yousefi A, Gohari Derakhshandeh P, Karamian R, Asadbegy M, Van Hecke K. New pallada- and platinacycle complexes of phosphorus ylide: Synthesis, structural characterization, antioxidant capacity and catalytic behavior towards Mizoroki-Heck reactions. Polyhedron 2017. [DOI: 10.1016/j.poly.2017.06.043] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
19
|
George JT, Srivatsan SG. Vinyluridine as a Versatile Chemoselective Handle for the Post-transcriptional Chemical Functionalization of RNA. Bioconjug Chem 2017; 28:1529-1536. [PMID: 28406614 DOI: 10.1021/acs.bioconjchem.7b00169] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The development of modular and efficient methods to functionalize RNA with biophysical probes is very important in advancing the understanding of the structural and functional relevance of RNA in various cellular events. Herein, we demonstrate a two-step bioorthogonal chemical functionalization approach for the conjugation of multiple probes onto RNA transcripts using a 5-vinyl-modified uridine nucleotide analog (VUTP). VUTP, containing a structurally noninvasive and versatile chemoselective handle, was efficiently incorporated into RNA transcripts by in vitro transcription reactions. Furthermore, we show for the first time the use of a palladium-mediated oxidative Heck reaction in functionalizing RNA with fluorogenic probes by reacting vinyl-labeled RNA transcripts with appropriate boronic acid substrates. The vinyl label also permitted the post-transcriptional functionalization of RNA by a reagent-free inverse electron demand Diels-Alder (IEDDA) reaction in the presence of tetrazine substrates. Collectively, our results demonstrate that the incorporation of VUTP provides newer possibilities for the modular functionalization of RNA with variety of reporters.
Collapse
Affiliation(s)
- Jerrin Thomas George
- Department of Chemistry, Indian Institute of Science Education and Research (IISER) Pune , Dr. Homi Bhabha Road, Pashan, Pune 411008, India
| | - Seergazhi G Srivatsan
- Department of Chemistry, Indian Institute of Science Education and Research (IISER) Pune , Dr. Homi Bhabha Road, Pashan, Pune 411008, India
| |
Collapse
|
20
|
Silarska E, Trzeciak A. Oxygen-promoted coupling of arylboronic acids with olefins catalyzed by [CA]2[PdX4] complexes without a base. ACTA ACUST UNITED AC 2015. [DOI: 10.1016/j.molcata.2015.07.003] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
21
|
Tang J, Cong M, Xia Y, Quéléver G, Fan Y, Qu F, Peng L. Pd-catalyzed oxidative C–H alkenylation for synthesizing arylvinyltriazole nucleosides. Org Biomol Chem 2015; 13:110-4. [DOI: 10.1039/c4ob01836b] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Pd-catalyzed oxidative C–H alkenylation: an effective method for synthesizing arylvinyltriazole nucleosides in good yields and with large functional group tolerance.
Collapse
Affiliation(s)
- Jingjie Tang
- Aix-Marseille Université
- CNRS
- CINaM UMR 7325
- Marseille
- France
| | - Mei Cong
- Aix-Marseille Université
- CNRS
- CINaM UMR 7325
- Marseille
- France
| | - Yi Xia
- Aix-Marseille Université
- CNRS
- CINaM UMR 7325
- Marseille
- France
| | | | - Yuting Fan
- Aix-Marseille Université
- CNRS
- CINaM UMR 7325
- Marseille
- France
| | - Fanqi Qu
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan
- P. R. China
| | - Ling Peng
- Aix-Marseille Université
- CNRS
- CINaM UMR 7325
- Marseille
- France
| |
Collapse
|