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Polaczek J, Kieca K, Oszajca M, Impert O, Katafias A, Chatterjee D, Ćoćić D, Puchta R, Stochel G, Hubbard CD, van Eldik R. A Personal Account on Inorganic Reaction Mechanisms. CHEM REC 2023:e202300278. [PMID: 37821418 DOI: 10.1002/tcr.202300278] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 09/22/2023] [Indexed: 10/13/2023]
Abstract
The presented Review is focused on the latest research in the field of inorganic chemistry performed by the van Eldik group and his collaborators. The first part of the manuscript concentrates on the interaction of nitric oxide and its derivatives with biologically important compounds. We summarized mechanistic information on the interaction between model porphyrin systems (microperoxidase) and NO as well as the recent studies on the formation of nitrosylcobalamin (CblNO). The following sections cover the characterization of the Ru(II)/Ru(III) mixed-valence ion-pair complexes, including Ru(II)/Ru(III)(edta) complexes. The last part concerns the latest mechanistic information on the DFT techniques applications. Each section presents the most important results with the mechanistic interpretations.
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Affiliation(s)
- Justyna Polaczek
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
| | - Konrad Kieca
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
- Jagiellonian University, Doctoral School of Exact and Natural Sciences, Kraków, 30-348, Krakow, Poland
| | - Maria Oszajca
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
| | - Olga Impert
- Faculty of Chemistry, Nicolaus Copernicus University in Torun, Gagarina 7, 87-100, Torun, Poland
| | - Anna Katafias
- Faculty of Chemistry, Nicolaus Copernicus University in Torun, Gagarina 7, 87-100, Torun, Poland
| | - Debabrata Chatterjee
- Faculty of Chemistry, Nicolaus Copernicus University in Torun, Gagarina 7, 87-100, Torun, Poland
- Vice-Chancellor's Research Group, Zoology Department, University of Burdwan, Burdwan, 713104, India
| | - Dušan Ćoćić
- University of Kragujevac, Faculty of Science, Department of Chemistry, Radoja Domanovića 12, P. O. Box 60, 34000, Kragujevac, Serbia
| | - Ralph Puchta
- Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstrasse 1, 91058, Erlangen, Germany
- Central Institute for Scientific Computing (CISC), University of Erlangen-Nuremberg, Martensstr. 5a, 91058, Erlangen, Germany
- Computer Chemistry Center, Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Nägelsbachstr. 25, 91052, Erlangen, Germany
| | - Grażyna Stochel
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
| | - Colin D Hubbard
- Department of Chemistry, University of New Hampshire, Durham, 03824, USA
| | - Rudi van Eldik
- Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstrasse 1, 91058, Erlangen, Germany
- Faculty of Chemistry, Nicolaus Copernicus University in Torun, Gagarina 7, 87-100, Torun, Poland
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Buchner MR, Müller M. Ligand Influence on Structural and Spectroscopic Properties of Beryllium Oxocarboxylates. Inorg Chem 2021; 60:17379-17387. [PMID: 34730335 DOI: 10.1021/acs.inorgchem.1c02939] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Aluminum-based adjuvants for vaccines and beryllium ions interact with the same immune receptor. The Be4O core, which is also found in beryllium oxocarboxylates, has been proposed to be the binding species in the latter case. However, this is not proven due to a lack of suitable probes for the Be4O moiety. Therefore, a versatile synthetic route to beryllium oxocarboxylates has been developed to investigate the steric and electronic influence of the ligands onto their molecular and spectroscopic properties. The oxocarboxylates exhibit extremely narrow line widths in 9Be NMR spectroscopy, and the chemical shift is only influenced by the sterics of the ligands. The mean variation of the atomic distances in the central Be4O building block is extremely small over all investigated compounds, and even the C-C distances are only little perturbed by the properties of the ligands. Vibrational spectroscopy showed Be-O bands; however, further distinctions could not be drawn.
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Affiliation(s)
- Magnus R Buchner
- Fachbereich Chemie, Philipps-Universität Marburg, 35032 Marburg, Germany
| | - Matthias Müller
- Fachbereich Chemie, Philipps-Universität Marburg, 35032 Marburg, Germany
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Scheibe B, Buchner MR. Carboxylic Acid Ester Adducts of Beryllium Chloride and Their Role in the Synthesis of Beryllium Nitrates. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800177] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Benjamin Scheibe
- Anorganische Chemie; Arbeitsgruppe Fluorchemie; Philipps-Universität Marburg; Hans-Meerwein-Strasse 4 35032 Marburg Germany
| | - Magnus R. Buchner
- Anorganische Chemie; Nachwuchsgruppe Berylliumchemie; Fachbereich Chemie; Philipps-Universität Marburg; Hans-Meerwein-Strasse 4 35032 Marburg Germany
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Berger RJ, Mera-Adasme R. Glutamyl-glutamate – a tailor-made chelating ligand for the [Be4O]6+ core in basic beryllium complexes and implications on investigations on the origins of chronic beryllium disease. ACTA ACUST UNITED AC 2015. [DOI: 10.1515/znb-2015-0157] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Density functional theory calculations suggest that l-glutamyl-l-glutamate [H-Glu-Glu-H]2– can act as an efficient chelating ligand in basic beryllium carboxylates of type Be4O(RCO2)6. An exergonic energy balance of –10.6 kcal mol–1 for the substitution of two [AcO]– anions by one [H-Glu-Glu-OH]2– dianion in Be4O(AcO2)6 has been calculated; for a second and third substitutions, the computed energy release amounts to –9.3, and –11.3 kcal mol–1. The coordination geometry of the complexes shows a trend toward less deviation from local octahedral symmetry with increasing number of [H-Glu-Glu-OH]2– ligands. The implications of these findings for the yet unknown molecular origins of chronic beryllium disease (CBD) are discussed, and a Be4O moiety is suggested as the beryllium species engaged in CBD.
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Affiliation(s)
- Raphael J.F. Berger
- Materialchemie, Paris-Lodron Universität Salzburg, Hellbrunner Strasse 34, 5020 Salzburg, Austria; and Department of Chemistry, P.O. Box 55 FI-0014, University of Helsinki, Finland
| | - Raúl Mera-Adasme
- Laboratorio de Química Inorgánica Teórica, Departamento de Química, Facultad de Ciencias, Universidad de Chile, Santiago, Chile
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Berger RJF, Jana S, Monkowius U, Mitzel NW. Bis(μ-diisopropyl-hydoxylaminato)-κ(2) O:N;κ(2) O:O-bis-[(diisopropyl-hydoxylaminato-κO)beryllium]. Acta Crystallogr Sect E Struct Rep Online 2012; 68:m1463. [PMID: 23468690 PMCID: PMC3588725 DOI: 10.1107/s1600536812045655] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2012] [Accepted: 11/05/2012] [Indexed: 11/30/2022]
Abstract
The title compound, [Be2(C6H14NO)4], was prepared from a solution of BeCl2 in diethyl ether and two equivalents of O-lithiated N,N-diisopropylhydoxylamine. The molecular structure is composed of a dinuclear unit forming a central five-membered planar Be—O—Be—O—N ring (sum of internal angles = 540.0°; r.m.s. deviation from planarity = 0.0087 Å). Both Be atoms show the unusual coordination number of three, with one Be atom coordinated by three O atoms and the other by two O atoms and one N atom, both in distorted trigonal–planar environments. The Be—O distances are in the range 1.493 (5)–1.600 (5) Å and the Be—N distance is 1.741 (5) Å.
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