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Okamoto N, Kadoya M, Wada Y. Clinical and Molecular Features of Patients With Congenital Disorders of Glycosylation in Japan. JIMD Rep 2025; 66:e70011. [PMID: 40191061 PMCID: PMC11969085 DOI: 10.1002/jmd2.70011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Revised: 03/13/2025] [Accepted: 03/17/2025] [Indexed: 04/09/2025] Open
Abstract
Congenital disorders of glycosylation (CDG) are a heterogeneous group of diseases caused by defects in various steps of the glycosylation pathway. There are over 200 known human glycosylation-related disorders. Many of these defects lead to multisystemic manifestations, commonly involving the central nervous system, with symptoms ranging from mild to severe. The phenotypic presentation of CDG can vary significantly. Identifying altered protein glycosylation is crucial for accurate diagnosis. Our research institute has contributed to the CDG diagnostic support center in Japan, developing new analytical techniques utilizing mass spectrometry. These techniques allow for the identification of defects in N-glycosylation, O-glycosylation, and combined glycosylation pathways. Advances in genetic analysis, including whole exome sequencing, have revealed that certain types of CDG are more prevalent than previously recognized. We have contributed to the molecular diagnosis of 66 CDG patients in Japan. Although PMM2-CDG is the most common form of CDG, it was only detected in 17% of the patients in the present study, suggesting that its incidence is much lower in Japan compared to European countries. We also conducted a comprehensive review of case reports of CDG in Japan, further describing the clinical and molecular spectrum of the disease in this population.
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Affiliation(s)
- Nobuhiko Okamoto
- Department of Medical GeneticsOsaka Women's and Children's HospitalIzumiJapan
- Department of Molecular MedicineResearch Institute, Osaka Women's and Children's HospitalIzumiJapan
| | - Machiko Kadoya
- Department of Molecular MedicineResearch Institute, Osaka Women's and Children's HospitalIzumiJapan
| | - Yoshinao Wada
- Department of Molecular MedicineResearch Institute, Osaka Women's and Children's HospitalIzumiJapan
- Department of Obstetric MedicineOsaka Women's and Children's HospitalIzumiJapan
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Wada Y. Mass Spectrometry as a First-Line Diagnostic Aid for Congenital Disorders of Glycosylation. Mass Spectrom (Tokyo) 2025; 14:A0169. [PMID: 39931184 PMCID: PMC11808201 DOI: 10.5702/massspectrometry.a0169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2025] [Accepted: 01/27/2025] [Indexed: 02/13/2025] Open
Abstract
Congenital disorders of glycosylation (CDG) constitute a group of rare inherited metabolic disorders resulting from mutations in genes involved in the biosynthesis of glycan chains that are covalently attached to proteins or lipids. To date, nearly 200 genes have been identified as responsible for these disorders, with approximately half implicated in N-glycosylation defects. Diagnosis of CDG is primarily achieved through genetic analysis and the identification of glycan abnormalities, referred to as molecular phenotypes. With the increasing use of whole exome and genome sequencing in the investigation of diseases with unknown etiology, the number of cases suspected of CDG is increasing, highlighting the necessity for glycan analysis. Molecular phenotyping in CDG typically targets glycoproteins, with transferrin and apolipoprotein CIII being key representatives of N- and mucin-type O-glycosylation, respectively. Mass spectrometry (MS) provides rapid analysis and yields moderately detailed information, establishing it as a first-line molecular diagnostic tool that complements genetic analysis. Structural anomalies detected by MS can be classified into distinct patterns, which may indicate specific defects within the glycosylation pathway. In cases of CDG types that lack clear molecular phenotypes, characteristic metabolites can often be identified and quantified by MS, further aiding in the diagnostic process. Molecular diagnosis of CDG using MS can be performed with a standard mass spectrometer and a dried blood spot on filter paper, enabling its application in population-based mass screening.
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Affiliation(s)
- Yoshinao Wada
- Department of Obstetric Medicine, Osaka Women’s and Children’s Hospital, 840 Murodo-cho, Izumi, Osaka 594–1101, Japan
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Masunaga Y, Nishimura G, Takahashi K, Hishiyama T, Imamura M, Kashimada K, Kadoya M, Wada Y, Okamoto N, Oba D, Ohashi H, Ikeno M, Sakamoto Y, Fukami M, Saitsu H, Ogata T. Clinical and molecular findings in three Japanese patients with N-acetylneuraminic acid synthetase-congenital disorder of glycosylation (NANS-CDG). Sci Rep 2022; 12:17079. [PMID: 36224347 PMCID: PMC9556533 DOI: 10.1038/s41598-022-21751-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 09/30/2022] [Indexed: 01/04/2023] Open
Abstract
We report clinical and molecular findings in three Japanese patients with N-acetylneuraminic acid synthetase-congenital disorder of glycosylation (NANS-CDG). Patient 1 exhibited a unique constellation of clinical features including marked hydrocephalus, spondyloepimetaphyseal dysplasia (SEMD), and thrombocytopenia which is comparable to that of an infant reported by Faye-Peterson et al., whereas patients 2 and 3 showed Camera-Genevieve type SMED with intellectual/developmental disability which is currently known as the sole disease name for NANS-CDG. Molecular studies revealed a maternally inherited likely pathogenic c.207del:p.(Arg69Serfs*57) variant and a paternally derived likely pathogenic c.979_981dup:p.(Ile327dup) variant in patient 1, a homozygous likely pathogenic c.979_981dup:p.(Ile327dup) variant caused by maternal segmental isodisomy involving NANS in patient 2, and a paternally inherited pathogenic c.133-12T>A variant leading to aberrant splicing and a maternally inherited likely pathogenic c.607T>C:p.(Tyr203His) variant in patient 3 (reference mRNA: NM_018946.4). The results, together with previously reported data, imply that (1) NANS plays an important role in postnatal growth and fetal brain development; (2) SMED is recognizable at birth and shows remarkable postnatal evolution; (3) NANS-CDG is associated with low-normal serum sialic acid, obviously elevated urine N-acetylmannosamine, and normal N- and O-glycosylation of serum proteins; and (4) NANS-CDG is divided into Camera-Genevieve type and more severe Faye-Peterson type.
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Affiliation(s)
- Yohei Masunaga
- grid.505613.40000 0000 8937 6696Department of Pediatrics, Hamamatsu University School of Medicine, Hamamatsu, Japan
| | - Gen Nishimura
- grid.430047.40000 0004 0640 5017Center for Intractable Diseases, Saitama Medical University Hospital, Saitama, Japan
| | - Koji Takahashi
- grid.410824.b0000 0004 1764 0813Department of Pediatrics, Tsuchiura Kyodo General Hospital, Tsuchiura, Japan
| | - Tomiyuki Hishiyama
- grid.410824.b0000 0004 1764 0813Department of Neonatology, Tsuchiura Kyodo General Hospital, Tsuchiura, Japan
| | - Masatoshi Imamura
- grid.410824.b0000 0004 1764 0813Department of Neonatology, Tsuchiura Kyodo General Hospital, Tsuchiura, Japan
| | - Kenichi Kashimada
- grid.410824.b0000 0004 1764 0813Department of Pediatrics, Tsuchiura Kyodo General Hospital, Tsuchiura, Japan ,grid.265073.50000 0001 1014 9130Department of Pediatrics and Developmental Biology, Tokyo Medical and Dental University, Tokyo, Japan
| | - Machiko Kadoya
- grid.416629.e0000 0004 0377 2137Department of Molecular Medicine, Osaka Women’s and Children’s Hospital, Osaka, Japan
| | - Yoshinao Wada
- grid.416629.e0000 0004 0377 2137Department of Molecular Medicine, Osaka Women’s and Children’s Hospital, Osaka, Japan
| | - Nobuhiko Okamoto
- grid.416629.e0000 0004 0377 2137Department of Molecular Medicine, Osaka Women’s and Children’s Hospital, Osaka, Japan
| | - Daiju Oba
- grid.416697.b0000 0004 0569 8102Division of Medical Genetics, Saitama Children’s Medical Center, Saitama, Japan
| | - Hirofumi Ohashi
- grid.416697.b0000 0004 0569 8102Division of Medical Genetics, Saitama Children’s Medical Center, Saitama, Japan
| | - Mitsuru Ikeno
- grid.258269.20000 0004 1762 2738Department of Pediatrics, Juntendo University School of Medicine, Tokyo, Japan
| | - Yuko Sakamoto
- grid.482668.60000 0004 1769 1784Department of Orthopedics, Juntendo University Nerima Hospital, Tokyo, Japan
| | - Maki Fukami
- grid.63906.3a0000 0004 0377 2305Department of Molecular Endocrinology, National Research Institute for Child Health and Development, Tokyo, Japan
| | - Hirotomo Saitsu
- grid.505613.40000 0000 8937 6696Department of Biochemistry, Hamamatsu University School of Medicine, Hamamatsu, Japan
| | - Tsutomu Ogata
- grid.505613.40000 0000 8937 6696Department of Pediatrics, Hamamatsu University School of Medicine, Hamamatsu, Japan ,grid.63906.3a0000 0004 0377 2305Department of Molecular Endocrinology, National Research Institute for Child Health and Development, Tokyo, Japan ,grid.505613.40000 0000 8937 6696Department of Biochemistry, Hamamatsu University School of Medicine, Hamamatsu, Japan ,grid.413553.50000 0004 1772 534XDepartment of Pediatrics, Hamamatsu Medical Center, Hamamatsu, Japan
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Wada Y, Okamoto N. Electrospray Ionization Mass Spectrometry of Apolipoprotein CIII to Evaluate O-glycan Site Occupancy and Sialylation in Congenital Disorders of Glycosylation. Mass Spectrom (Tokyo) 2022; 11:A0104. [PMID: 36060528 PMCID: PMC9396207 DOI: 10.5702/massspectrometry.a0104] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Accepted: 06/30/2022] [Indexed: 01/01/2023] Open
Abstract
Congenital disorders of glycosylation (CDG) are inherited metabolic diseases that affect the synthesis of glycoconjugates. Defects in mucin-type O-glycosylation occur independently or in combination with N-glycosylation disorders, and the profiling of the O-glycans of apolipoprotein CIII (apoCIII) by mass spectrometry (MS) can be used to support a diagnosis. The biomarkers are site occupancy and sialylation levels, which are indicated by the content of non-glycosylated apoCIII0a isoform and by the ratio of monosialylated apoCIII1 to disialylated apoCIII2 isoforms, respectively. In this report, electrospray ionization (ESI) quadrupole MS of apoCIII was used to identify these biomarkers. Among the instrumental parameters, the declustering potential (DP) induced the fragmentation of the O-glycan moiety including the Thr-GalNAc linkage, resulting in an increase in apoCIII0a ions. This incurs the risk of creating a false positive for reduced site occupancy. The apoCIII1/apoCIII2 ratio was substantially unchanged despite some dissociation of sialic acids. Therefore, appropriate DP settings are especially important when transferrin, which requires a higher DP, for N-glycosylation disorders is analyzed simultaneously with apoCIII in a single ESI MS measurement. Finally, a reference range of diagnostic biomarkers and mass spectra of apoCIII obtained from patients with SLC35A1-, TRAPPC11-, and ATP6V0A2-CDG are presented.
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Affiliation(s)
- Yoshinao Wada
- Department of Obstetric Medicine, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan
- Department of Molecular Medicine, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan
| | - Nobuhiko Okamoto
- Department of Molecular Medicine, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan
- Department of Medical Genetics, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan
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Wada Y, Kadoya M, Okamoto N. Mass Spectrometry of Transferrin and Apolipoprotein CIII from Dried Blood Spots for Congenital Disorders of Glycosylation. Mass Spectrom (Tokyo) 2022; 11:A0113. [PMID: 36713804 PMCID: PMC9853950 DOI: 10.5702/massspectrometry.a0113] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 12/07/2022] [Indexed: 12/13/2022] Open
Abstract
Dried blood spot (DBS) is the standard specimen for the newborn screening of inborn errors of metabolism (IEM) by tandem mass spectrometry. Availability of DBS for the mass spectrometric analysis of the diagnostic marker proteins, transferrin (Tf) and apolipoprotein CIII (apoCIII), of congenital disorders of glycosylation (CDG) was examined. Recovery of Tf from DBS was only slightly reduced compared with fresh serum. Although oxidation of the core polypeptides was observed, glycans of Tf and apoCIII were unaffected by storage of DBS in the ambient environment for at least 1 month. The combination of DBS and the triple quadrupole mass spectrometer used for IEM screening was sufficient to characterize the aberrant glycoprofiles of Tf and apoCIII in CDG. DBS or dried serum spot on filter paper can reduce the cost of sample transportation and potentially promote mass spectrometric screening of CDG.
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Affiliation(s)
- Yoshinao Wada
- Department of Obstetric Medicine, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan,Department of Molecular Medicine, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan,Correspondence to: Yoshinao Wada, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan, e-mail:
| | - Machiko Kadoya
- Department of Molecular Medicine, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan
| | - Nobuhiko Okamoto
- Department of Molecular Medicine, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan,Department of Medical Genetics, Osaka Women’s and Children’s Hospital (OWCH), 840 Murodo-cho, Izumi, Osaka 594–1101, Japan
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