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Jain D, Kumari A, Saheewala H, Sanadhya S, Maheshwari D, Meena RH, Singh A, Gera R, Mohanty SR. Biochemical, functional and molecular characterization of pigeon pea rhizobia isolated from semi-arid regions of India. Arch Microbiol 2020; 202:1809-1816. [PMID: 32436039 DOI: 10.1007/s00203-020-01904-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2020] [Revised: 04/16/2020] [Accepted: 05/11/2020] [Indexed: 11/26/2022]
Abstract
Pigeon pea (Cajanus cajan (L.) Millspaugh) is among the top ten legumes grown globally not only having high tolerance to environmental stresses along, but also has the high biomass and productivity with optimal nutritional profiles. In the present study, 55 isolates of rhizobia were identified from 22 nodule samples of pigeon pea collected from semi-arid regions of India on the basis of morphological, biochemical, plant growth promoting activities and their ability to tolerate the stress conditions viz. pH, salt, temperature and drought stress. Amongst all the 55 isolates, 37 isolates showed effective nodulation under in vitro conditions in pigeon pea. Further, five isolates having multiple PGP activities and high in vitro symbiotic efficiency were subjected to 16S rRNA sequencing and confirmed their identities as Rhizobium, Mesorhizobium, Sinorhizobium sp. Further these 37 isolates were characterized at molecular level using ARDRA and revealed significant molecular diversity. Based on UPGMA clustering analysis, these isolates showed significant molecular diversity. The high degree of molecular diversity is due to mixed cropping of legumes in the region. The assessment of genetic diversity and molecular characterization of novel strains is a very important tool for the replacement of ineffective rhizobial strains with the efficient strains for the improvement in the nodulation and pigeon pea quality. The pigeon pea isolates with multiple PGPR activities could be further used for commercial production.
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Affiliation(s)
- Devendra Jain
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, India.
| | - Anisha Kumari
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, India
| | - Heena Saheewala
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, India
| | - Suman Sanadhya
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, India
| | - Deepali Maheshwari
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, India
| | - Ram Hari Meena
- Department of Soil Science and Agricultural Chemistry, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, India
| | - Abhijeet Singh
- Department of Biosciences, Manipal University Jaipur, Jaipur, Rajasthan, India
| | - Rajesh Gera
- All India Network Project on Soil Biodiversity-Biofertilizers, Department of Microbiology, CCS Haryana Agricultural University, Hisar, 125004, India
| | - S R Mohanty
- All India Network Project on Soil Biodiversity-Biofertilizers, ICAR-Indian Institute of Soil Science, Bhopal, India
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Molecular Diversity Analysis of Plant Growth Promoting Rhizobium Isolated from Groundnut and Evaluation of Their Field Efficacy. Curr Microbiol 2020; 77:1550-1557. [PMID: 32248283 DOI: 10.1007/s00284-020-01963-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2019] [Accepted: 03/21/2020] [Indexed: 10/24/2022]
Abstract
Rhizobium are nitrogen-fixing bacteria which possess the nif gene that codes for the nitrogenase enzyme involved in the reduction of atmospheric dinitrogen (N2) to ammonia. Thirty rhizobial strains were identified from ten groundnut plant root nodules collected from semi-arid regions of Rajasthan, India. The isolates were initially identified on the basis of morphological, biochemical, and molecular characteristics. These rhizobium strains were further screened for plant growth promoting activities. Twenty-eight strains were able to produce indole acetic acid, nine strains could solubilize phosphate, and twenty-nine strains exhibited positive results for siderophore and ammonia production. All the bacterial strains were able to efficiently nodulate the groundnut under pot conditions and based on multiple PGP activities six strains were selected for field evaluation. Field experiments confirmed the effectiveness of these selected rhizobium strains resulted in significantly higher nodule number, nodule dry weight, grain yield, and yield components of inoculated plants. Inoculation of the rhizobium strain GN223 followed by GN221 resulted in high yield and field efficiency. Isolation of effective microbial strains is the prerequisite to increase the yield which is evident from the field data of the present study. Hence, these strains might serve as proficient inoculants.
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El dein Abdel-lateif KS, Mansour SR, El-Badawy MF, Shohayeb MM. Isolation and molecular characterization ofFrankiastrains resistant to some heavy metals. J Basic Microbiol 2018; 58:720-729. [DOI: 10.1002/jobm.201800122] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2018] [Accepted: 06/11/2018] [Indexed: 11/09/2022]
Affiliation(s)
- Khalid Salah El dein Abdel-lateif
- Department of Pharmaceutical Microbiology, College of Pharmacy; Taif University; Taif Saudi Arabia
- Department of Genetics, Faculty of Agriculture; Menoufia University; Egypt
| | - Samira R. Mansour
- Botany Department, Faculty of Science; Suez Canal University; Ismailia Egypt
| | - Mohamed F. El-Badawy
- Department of Pharmaceutical Microbiology, College of Pharmacy; Taif University; Taif Saudi Arabia
- Department of Microbiology and Immunology, Faculty of Pharmacy; Misr University for Science and Technology; Egypt
| | - Mohamed M. Shohayeb
- Department of Pharmaceutical Microbiology, College of Pharmacy; Taif University; Taif Saudi Arabia
- Department of Microbiology, Faculty of Pharmacy; Tanta University; Egypt
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