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Phillips RA, Kraev I, Lange S. Protein Deimination and Extracellular Vesicle Profiles in Antarctic Seabirds. BIOLOGY 2020; 9:E15. [PMID: 31936359 PMCID: PMC7168935 DOI: 10.3390/biology9010015] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Revised: 12/19/2019] [Accepted: 01/07/2020] [Indexed: 02/06/2023]
Abstract
Pelagic seabirds are amongst the most threatened of all avian groups. They face a range of immunological challenges which seem destined to increase due to environmental changes in their breeding and foraging habitats, affecting prey resources and exposure to pollution and pathogens. Therefore, the identification of biomarkers for the assessment of their health status is of considerable importance. Peptidylarginine deiminases (PADs) post-translationally convert arginine into citrulline in target proteins in an irreversible manner. PAD-mediated deimination can cause structural and functional changes in target proteins, allowing for protein moonlighting in physiological and pathophysiological processes. PADs furthermore contribute to the release of extracellular vesicles (EVs), which play important roles in cellular communication. In the present study, post-translationally deiminated protein and EV profiles of plasma were assessed in eight seabird species from the Antarctic, representing two avian orders: Procellariiformes (albatrosses and petrels) and Charadriiformes (waders, auks, gulls and skuas). We report some differences between the species assessed, with the narrowest EV profiles of 50-200 nm in the northern giant petrel Macronectes halli, and the highest abundance of larger 250-500 nm EVs in the brown skua Stercorarius antarcticus. The seabird EVs were positive for phylogenetically conserved EV markers and showed characteristic EV morphology. Post-translational deimination was identified in a range of key plasma proteins critical for immune response and metabolic pathways in three of the bird species under study; the wandering albatross Diomedea exulans, south polar skua Stercorarius maccormicki and northern giant petrel. Some differences in Gene Ontology (GO) biological and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways for deiminated proteins were observed between these three species. This indicates that target proteins for deimination may differ, potentially contributing to a range of physiological functions relating to metabolism and immune response, as well as to key defence mechanisms. PAD protein homologues were identified in the seabird plasma by Western blotting via cross-reaction with human PAD antibodies, at an expected 75 kDa size. This is the first study to profile EVs and to identify deiminated proteins as putative novel plasma biomarkers in Antarctic seabirds. These biomarkers may be further refined to become useful indicators of physiological and immunological status in seabirds-many of which are globally threatened.
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Affiliation(s)
- Richard A. Phillips
- British Antarctic Survey, Natural Environment Research Council, Cambridge CB3 0ET, UK;
| | - Igor Kraev
- Electron Microscopy Suite, Faculty of Science, Technology, Engineering and Mathematics, Open University, Milton Keynes MK7 6AA, UK;
| | - Sigrun Lange
- Tissue Architecture and Regeneration Research Group, School of Life Sciences, University of Westminster, London W1W 6UW, UK
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Jaeger A, Lebarbenchon C, Bourret V, Bastien M, Lagadec E, Thiebot JB, Boulinier T, Delord K, Barbraud C, Marteau C, Dellagi K, Tortosa P, Weimerskirch H. Avian cholera outbreaks threaten seabird species on Amsterdam Island. PLoS One 2018; 13:e0197291. [PMID: 29847561 PMCID: PMC5976148 DOI: 10.1371/journal.pone.0197291] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2017] [Accepted: 04/29/2018] [Indexed: 11/19/2022] Open
Abstract
Infectious diseases may be particularly critical for the conservation of endangered species. A striking example is the recurrent outbreaks that have been occurring in seabirds on Amsterdam Island for the past 30 years, threatening populations of three Endangered seabird species and of the endemic, Critically Endangered Amsterdam albatross Diomedea amsterdamensis. The bacteria Pasteurella multocida (avian cholera causative agent), and to a lesser extent Erysipelothrix rhusiopathiae (erysipelas causative agent), were both suspected to be responsible for these epidemics. Despite this critical situation, demographic trends were not available for these threatened populations, and the occurrence and characterization of potential causative agents of epizootics remain poorly known. The aims of the current study were to (i) provide an update of population trends for four threatened seabird species monitored on Amsterdam Island, (ii) assess the occurrence of P. multocida, and E. rhusiopathiae in live birds from five species, (iii) search for other infectious agents in these samples and, (iv) isolate and genotype the causative agent(s) of epizooties from dead birds. Our study shows that the demographic situation has worsened substantially in three seabird species during the past decade, with extremely low reproductive success and declining populations for Indian yellow-nosed albatrosses Thalassarche carteri, sooty albatrosses Phoebetria fusca, and northern rockhopper penguins Eudyptes moseleyi. Pasteurella multocida or E. rhusiopathiae were detected by PCR in live birds of all five investigated species, while results were negative for eight additional infectious agents. A single strain of P. multocida was repeatedly cultured from dead birds, while no E. rhusiopathiae could be isolated. These results highlight the significance of P. multocida in this particular eco-epidemiological system as the main agent responsible for epizootics. The study stresses the urgent need to implement mitigation measures to alter the course of avian cholera outbreaks threatening the persistence of seabird populations on Amsterdam Island.
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Affiliation(s)
- Audrey Jaeger
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Université de la Réunion, UMR ENTROPIE, UR, IRD, CNRS, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Camille Lebarbenchon
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Vincent Bourret
- Centre d’Ecologie Fonctionnelle et Evolutive, CNRS-Université Montpellier UMR 5175, Montpellier, France
| | - Matthieu Bastien
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
| | - Erwan Lagadec
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
| | - Jean-Baptiste Thiebot
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
| | - Thierry Boulinier
- Centre d’Ecologie Fonctionnelle et Evolutive, CNRS-Université Montpellier UMR 5175, Montpellier, France
| | - Karine Delord
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
| | - Christophe Barbraud
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
| | - Cédric Marteau
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
| | - Koussay Dellagi
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Pablo Tortosa
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Henri Weimerskirch
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
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A PELAGIC OUTBREAK OF AVIAN CHOLERA IN NORTH AMERICAN GULLS: SCAVENGING AS A PRIMARY MECHANISM FOR TRANSMISSION? J Wildl Dis 2016; 52:793-802. [PMID: 27455197 DOI: 10.7589/2015-12-342] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Avian cholera, caused by the bacterium Pasteurella multocida , is an endemic disease globally, often causing annual epizootics in North American wild bird populations with thousands of mortalities. From December 2006 to March 2007, an avian cholera outbreak caused mortality in marine birds off the coast of Atlantic Canada, largely centered 300-400 km off the coast of the island of Newfoundland. Scavenging gulls ( Larus spp.) were the primary species detected; however, mortality was also identified in Black-legged Kittiwakes ( Rissa tridactyla ) and one Common Raven ( Corvus corax ), a nonmarine species. The most common gross necropsy findings in the birds with confirmed avian cholera were acute fibrinous and necrotizing lesions affecting the spleen, air sacs, and pericardium, and nonspecific hepatomegaly and splenomegaly. The etiologic agent, P. multocida serotype 1, was recovered from 77 of 136 carcasses examined, and confirmed or probable avian cholera was diagnosed in 85 cases. Mortality observed in scavenging gull species was disproportionately high relative to their abundance, particularly when compared to nonscavenging species. The presence of feather shafts in the ventricular lumen of the majority of larid carcasses diagnosed with avian cholera suggests scavenging of birds that died from avian cholera as a major mode of transmission. This documentation of an outbreak of avian cholera in a North American pelagic environment affecting primarily scavenging gulls indicates that offshore marine environments may be a component of avian cholera dynamics.
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Dewar ML, Arnould JPY, Dann P, Trathan P, Groscolas R, Smith S. Interspecific variations in the gastrointestinal microbiota in penguins. Microbiologyopen 2013; 2:195-204. [PMID: 23349094 PMCID: PMC3584224 DOI: 10.1002/mbo3.66] [Citation(s) in RCA: 82] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2012] [Revised: 12/10/2012] [Accepted: 12/17/2012] [Indexed: 01/15/2023] Open
Abstract
Despite the enormous amount of data available on the importance of the gastrointestinal (GI) microbiota in vertebrate (especially mammals), information on the GI microbiota of seabirds remains incomplete. As with many seabirds, penguins have a unique digestive physiology that enables them to store large reserves of adipose tissue, protein, and lipids. This study used quantitative real-time polymerase chain reaction (qPCR) and 16S rRNA gene pyrosequencing to characterize the interspecific variations of the GI microbiota of four penguin species: the king, gentoo, macaroni, and little penguin. The qPCR results indicated that there were significant differences in the abundance of the major phyla Firmicutes, Bacteroides, Actinobacteria, and Proteobacteria. A total of 132,340, 18,336, 6324, and 4826 near full-length 16S rRNA gene sequences were amplified from fecal samples collected from king, gentoo, macaroni, and little penguins, respectively. A total of 13 phyla were identified with Firmicutes, Bacteroidetes, Proteobacteria, and Fusobacteria dominating the composition; however, there were major differences in the relative abundance of the phyla. In addition, this study documented the presence of known human pathogens, such as Campylobacter, Helicobacter, Prevotella, Veillonella, Erysipelotrichaceae, Neisseria, and Mycoplasma. However, their role in disease in penguins remains unknown. To our knowledge, this is the first study to provide an in-depth investigation of the GI microbiota of penguins.
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Affiliation(s)
- Meagan L Dewar
- School of Exercise and Nutritional Sciences, Deakin University, Burwood, Australia.
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Barbosa A, Palacios MJ. Health of Antarctic birds: a review of their parasites, pathogens and diseases. Polar Biol 2009; 32:1095. [PMID: 32214635 PMCID: PMC7087846 DOI: 10.1007/s00300-009-0640-3] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2008] [Revised: 04/17/2009] [Accepted: 04/21/2009] [Indexed: 11/29/2022]
Abstract
Antarctic birds are not beyond the effects of parasites or pathogens. However, potential ecological consequences of wide-spread infections for bird populations in Antarctica have received little attention. In this paper, we review the information published about disease and parasites, and their effects on Antarctic birds. The information on host species, parasites and pathogens, and geographic regions is incomplete and data on ecological effects on the populations, including how birds respond to pathogens and parasites, are almost inexistent. We conclude that more research is needed to establish general patterns of spatial and temporal variation in pathogens and parasites, and to determine how such patterns could influence hosts. This information is crucial to limit the spread of outbreaks and may aid in the decision-making process should they occur.
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Affiliation(s)
- Andrés Barbosa
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas, CSIC, C/General Segura, 1, 04001 Almeria, Spain
- Present Address: Departamento de Ecología Evolutiva, Museo Nacional de Ciencias Naturales, CSIC, C/José Gutiérrez Abascal, 2, 28006 Madrid, Spain
| | - María José Palacios
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas, CSIC, C/General Segura, 1, 04001 Almeria, Spain
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