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Garnica S, Sandoval-Leiva P, Riess K. Phylogenetic relationships in the genus Podoserpula and description of P. aliweni, a new species from Chile. Mycologia 2021; 113:1110-1121. [PMID: 34190666 DOI: 10.1080/00275514.2021.1927422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
Phylogenetic analyses based on a three-locus nuclear data set (ITS1-5.8S-ITS2, the 5' end of the 28S, and the largest subunit of RNA polymerase I) supported the pagoda fungus (Podoserpula, Amylocorticiales) as a monophyletic group most closely related to species of Anomoporia, which is nonmonophyletic, and Amyloathelia. Phylogenetic relationships inferred from internal transcribed spacer (ITS) sequences of specimens sampled in Australia, Chile, China, Madagascar, and New Zealand divided Podoserpula into two major lineages: Clade A containing Australian and New Zealand collections designated P. pusio and the Chinese species P. ailaoshanensis, which have basidiospores with no reaction to Melzer's reagent, and Clade B, which includes a species described from Chile, P. aliweni, and specimens originating from Australia, Chile, Madagascar, and New Zealand with dextrinoid basidiospores. Podoserpula aliweni forms a unique branch in the phylogenetic tree and differs from its most closely related taxon by 1.8-2.1% in the ITS region. The new species exhibits a tree-like habit with a white to concolorous stipe-like base with the hymenophore's main subcylindrical axis bearing up to 18 superimposed pilei, slightly enrolled white margins shading from yellowish white to orange-yellow toward the center, and ellipsoid to broadly ellipsoid basidiospores measuring 4.0-4.5 × 3.5 µm. Ecologically, P. aliweni occurs during the rainy season, often gregariously on dried branches or wet soil under Nothofagus dombeyi or N. obliqua and has a distribution range of more than 600 km in southern Chile. This study extends the known distributional range and increases our knowledge on the phylogenetic diversity and taxonomy in Podoserpula.
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Affiliation(s)
- Sigisfredo Garnica
- Laboratorio de Micología, Instituto de Bioquímica y Microbiología, Universidad Austral de Chile, Isla Teja, Casilla 567, 5049000, Valdivia, Chile
| | | | - Kai Riess
- iES Landau, Institute for Environmental Sciences, University of Koblenz-Landau, Fortstr. 7, 76829 Landau, Germany
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Yuan HS, Lu X, Dai YC, Hyde KD, Kan YH, Kušan I, He SH, Liu NG, Sarma VV, Zhao CL, Cui BK, Yousaf N, Sun G, Liu SY, Wu F, Lin CG, Dayarathne MC, Gibertoni TB, Conceição LB, Garibay-Orijel R, Villegas-Ríos M, Salas-Lizana R, Wei TZ, Qiu JZ, Yu ZF, Phookamsak R, Zeng M, Paloi S, Bao DF, Abeywickrama PD, Wei DP, Yang J, Manawasinghe IS, Harishchandra D, Brahmanage RS, de Silva NI, Tennakoon DS, Karunarathna A, Gafforov Y, Pem D, Zhang SN, de Azevedo Santiago ALCM, Bezerra JDP, Dima B, Acharya K, Alvarez-Manjarrez J, Bahkali AH, Bhatt VK, Brandrud TE, Bulgakov TS, Camporesi E, Cao T, Chen YX, Chen YY, Devadatha B, Elgorban AM, Fan LF, Du X, Gao L, Gonçalves CM, Gusmão LFP, Huanraluek N, Jadan M, Jayawardena RS, Khalid AN, Langer E, Lima DX, de Lima-Júnior NC, de Lira CRS, Liu JK(J, Liu S, Lumyong S, Luo ZL, Matočec N, Niranjan M, Oliveira-Filho JRC, Papp V, Pérez-Pazos E, Phillips AJL, Qiu PL, Ren Y, Ruiz RFC, Semwal KC, Soop K, de Souza CAF, Souza-Motta CM, Sun LH, Xie ML, Yao YJ, Zhao Q, Zhou LW. Fungal diversity notes 1277–1386: taxonomic and phylogenetic contributions to fungal taxa. FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00461-7] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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He MQ, Zhao RL, Hyde KD, Begerow D, Kemler M, Yurkov A, McKenzie EHC, Raspé O, Kakishima M, Sánchez-Ramírez S, Vellinga EC, Halling R, Papp V, Zmitrovich IV, Buyck B, Ertz D, Wijayawardene NN, Cui BK, Schoutteten N, Liu XZ, Li TH, Yao YJ, Zhu XY, Liu AQ, Li GJ, Zhang MZ, Ling ZL, Cao B, Antonín V, Boekhout T, da Silva BDB, De Crop E, Decock C, Dima B, Dutta AK, Fell JW, Geml J, Ghobad-Nejhad M, Giachini AJ, Gibertoni TB, Gorjón SP, Haelewaters D, He SH, Hodkinson BP, Horak E, Hoshino T, Justo A, Lim YW, Menolli N, Mešić A, Moncalvo JM, Mueller GM, Nagy LG, Nilsson RH, Noordeloos M, Nuytinck J, Orihara T, Ratchadawan C, Rajchenberg M, Silva-Filho AGS, Sulzbacher MA, Tkalčec Z, Valenzuela R, Verbeken A, Vizzini A, Wartchow F, Wei TZ, Weiß M, Zhao CL, Kirk PM. Notes, outline and divergence times of Basidiomycota. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00435-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
AbstractThe Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406–430 Mya, classes are 211–383 Mya, and orders are 99–323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27–178 Mya, Pucciniomycotina from 85–222 Mya, and Ustilaginomycotina from 79–177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of their phylogeny and evolution.
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Buyck B, Duhem B, Das K, Jayawardena RS, Niveiro N, Pereira OL, Prasher IB, Adhikari S, Albertó EO, Bulgakov TS, Castañeda-Ruiz RF, Hembrom ME, Hyde KD, Lewis DP, Michlig A, Nuytinck J, Parihar A, Popoff OF, Ramirez NA, Silva MD, Verma RK, Hofstetter V. Fungal Biodiversity Profiles 21–30. CRYPTOGAMIE MYCOL 2017. [DOI: 10.7872/crym/v38.iss1.2017.101] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Bart Buyck
- Museum National d'Histoire Naturelle, CP 39, ISYEB, UMR 7205 CNRS MNHN UPMC EPHE, 12 Rue Buffon, F-75005 Paris, France
| | - Bernard Duhem
- Museum National d'Histoire Naturelle, UMS2700, OMSI, 16 rue Buffon, F-75005 Paris, France †
| | - Kanad Das
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Ruvishika S. Jayawardena
- Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People's Republic of China
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Nicolás Niveiro
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Olinto L. Pereira
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil
| | - Indu B. Prasher
- Department of Botany, Mycology and Plant Pathology Laboratory, Panjab University Chandigarh, 160014, India
| | - Sinchan Adhikari
- Department of Botany, University of Kalyani, Kalyani 741235, Nadia, West Bengal, India
| | - Edgardo Omar Albertó
- Instituto de Investigaciones Biotecnológicas — Instituto Tecnológico de Chascomús. IIB—INTECH (UNSAM—CONICET). Cam. Circ. Laguna Km. 6, Chascomús, Buenos Aires, CP 7130, Argentina
| | - Timur S. Bulgakov
- Academy of Biology and Biotechnology, Southern Federal University, Rostov-on-Don 344090, Rostov Region, Russia
| | - Rafael F. Castañeda-Ruiz
- Instituto de Investigaciones Fundamentales en Agricultura Tropical “Alejandro de Humboldt” (INIFAT), calle 1, esq. 2, Santiago de Las Vegas, Ciudad de La Habana, C.P. 17200, Cuba
| | - Manoj E. Hembrom
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
- Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
| | | | - Andrea Michlig
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Jorinde Nuytinck
- Naturalis Biodiversity Center, P.O. Box 9517, 2300RA Leiden, The Netherlands
| | - Arvind Parihar
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Orlando Fabián Popoff
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Natalia Andrea Ramirez
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Meiriele Da Silva
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil
| | - Rajnish K. Verma
- Department of Botany, Mycology and Plant Pathology Laboratory, Panjab University Chandigarh, 160014, India
| | - Valérie Hofstetter
- Department of Plant Protection, Agroscope Changins-Wädenswil Research Station ACW, Rte De Duiller, CH-1260 Nyon 1, Switzerland
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Zhou JL, Chen H, Cui BK. Podoserpula ailaoshanensis sp. nov. (Amylocorticiales, Basidiomycota) from China based on morphological and sequence analyses. MYCOSCIENCE 2016. [DOI: 10.1016/j.myc.2016.04.003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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