Source-specific geochemical and health risk assessment of anthropogenically induced metals in a tropical urban waterway

Thorough deliberation is necessary to safeguard the tropical urban streams near the shoreline from human interference, as it is becoming a notable environmental danger. Consequently, an in-depth study was carried out on a significant urban waterway located on the southern seashore of Bangladesh, which is positioned in the Bengal delta, renowned as the largest delta in the globe. The current investigation assesses the potential health hazards associated with trace metals (Hg, Cu, As, Pb, Ni, Zn, Cd, Cr, Fe, and Mn) and uses chemometric analysis to determine where they originate. Likewise geochemical methods are used to analyze the levels of trace metal enrichment and pollution in the sediments of the river. Almost all of the elements' mean concentrations were observed to be within the standard limits. The findings not only demonstrate the extent of trace metal contamination but also the health threats that it poses to the public (male, female, and children) by polluting the sediment. For all age groups of people, the hazard index was <1, suggesting there was no non-carcinogenic threat. Regardless of age and sex, exposure occurred in descending order: ingestion > dermal > inhalation. Total carcinogenic risk (TCR) values for males, females, and children were 1.45E-05, 1.56E-05, and 1.34E-04, respectively, recommending that children are at greater vulnerability than adults. The geochemical approach and chemometric analysis corroborate the human-induced impact of trace metal loading in the sediment of the waterway, which is predominantly caused by the oil industry, domestic garbage, and untreated waste discharge.

Holistic perilous index-based environmental appraisal of Metal(oid)s in the sole coral-bearing island of northeastern bay of Bengal

This study aimed to evaluate the concentration, distribution, along with the environmental and human health impact of eight heavy metals-Pb, Cr, Cu, Cd, Zn, Mn, Ni, and As-on St. Martin's Island in the northeastern Bay of Bengal, and in doing so to help implement new legislations to protect the island. Focusing on the island's significance as a tourist destination, with seafood being a prominent dietary component, three sample types (sediment, seawater, and crustaceans) were selected for a comprehensive assessment, considering seasonal variations. Concentration of metals was observed to be lower than the established standards in sediment samples, but in seawater samples, Pb, Cr, Cd and Zn were higher than US-EPA values for natural marine water. The metals displayed a decreasing trend of Zn > Ni > Pb > Cu > Mn > As > Cd > Cr in crustacean samples for both seasons. Crustacean samples displayed higher metal concentrations in winter than in monsoon. Pb exceeded the maximum allowable limit for crustaceans with a concentration of about 3 and 4 mg kg-1 in monsoon and winter respectively; being more than 6-8 times the standard for Bangladesh which is only about 0.5 mg kg-1. Health indices displayed that although adults may suffer less from carcinogenic/non-carcinogenic health effects, the risks are far greater for children. For both age groups, As and Ni displayed possibilities of developing cancer. Principal Component Analysis (PCA)shed light on the sources of metals and showed that most of them were from anthropogenic sources. Overall, this study found that the quality of the environment of the island was better in comparison to previous studies made before the pandemic, and so, if the trend continues, it may lead to a better environment for the organisms around the island and help to keep the negative physiological impacts from the consumption of these organisms to a minimal.

Minerals and fatty acid profile of small indigenous fish species from homestead ponds within a Sub-tropical coastal region

Malnutrition has emerged as a noticeable obstruction to the socio-economic advancement of rural areas along the coastal regions of Bangladesh. Small indigenous fish species (SIS) have the potential to alleviate the malnutrition issue because of having higher nutritional compositions. However, prior research has overlooked the detailed nutritional value of SIS originating from coastal regions. Consequently, the current investigation sought to analyze the mineral and fatty acid composition of twelve SIS obtained from coastal homestead ponds. The findings indicated that the mineral composition in SIS exhibited the following descending order: calcium (Ca) > phosphorus (P) > potassium (K) > magnesium (Mg) > iron (Fe) > zinc (Zn). Furthermore, when considering the overall mineral content in SIS, it ranked in the following decreasing order: A. testudineus, M. tengara, C. punctatus, N. nandus, P. sophore, C. fasciatus, A. mola, C. batrachus, H. fossilis, P. sarana, M. aculeatus, and O. pabda. The analysis of the fatty acid profile further revealed that SIS is a rich source of palmitic acid, linoleic acid, oleic acid, stearic acid, myristic acid, palmitoleic acid, and linolenic acid. The saturated fatty acid content of the SIS varied between 42.66 % and 63.37 %, and the highest content was found in A. mola whereas the lowest was in A. testudineus. On the other hand, the total monounsaturated fatty acid content of the SIS ranged from 26.49 % (A. mola) to 46.12 % (P. sarana), and the total PUFAs contents among the fish species ranged from 5.7 % (A. mola) to 16.54 % (H. fossilis). Therefore, SIS could be a key source of minerals and essential fatty acids for human well-being. This can help fulfill nutrient requirements and reduce malnutrition among coastal populations. It can be said that, if these fishes are introduced in the culture systems, it will be used for consumption as well as support the livelihood of coastal people.

Trace metals in transboundary (India-Myanmar-Bangladesh) anadromous fish Tenualosa ilisha and its consequences on human health

Hilsa shad (Tenualosa ilisha, Hamilton, 1822), the highly coveted table fish within the Indian subcontinent, is Bangladesh's most significant single-species fishery. To assess the risk that toxic metals pose to human health, certain health risk indices-estimated daily intake (EDI), target hazard quotient (THQ), total target hazard quotient (TTHQ), and target cancer risk (TR)-were calculated. The hierarchy of toxic metals (µg/g-ww) in Hilsa shad of the bay showed as Zn (13.64 ± 2.18) > Fe (9.25 ± 1.47) > Mn (2.98 ± 0.75) > Cu (0.57 ± 0.18) > Cr (0.23 ± 0.06) > Pb (0.22 ± 0.04) > As (0.08 ± 0.02) > Ni (0.06 ± 0.02) > Co (0.04 ± 0.01) > Cd (0.01 ± 0.003) in the wet season and Zn (11.45 ± 1.97) > Fe (10.51 ± 1.38) > Mn (3.80 ± 0.75) > Cu (0.73 ± 0.17) > Pb (0.30 ± 0.03) > Cr (0.20 ± 0.05) > As (0.09 ± 0.01) > Ni (0.08 ± 0.02) > Co (0.07 ± 0.02) > Cd (0.02 ± 0.004) in the dry season. The EDI of all the examined trace metals indicated no risk to human health from consuming Hilsa fish. The estimation of THQ and TTHQ suggested that the ingestion of both individual and combined trace metals through Hilsa shad consumption was safe from the perspective of human health. Also, there was no evidence of carcinogenic risk for consumers based on the evaluation of the TR value of metals (As, Pb, Cd, and Ni) due to Hilsa shad consumption.

Sediment-bound hazardous trace metals(oid) in south-eastern drainage system of Bangladesh: First assessment on human health

Despite the beneficial aspect of a natural drainage system, increasing human-induced activities, which include urbanization and growth in industrialization, degrade the ecosystem in terms of trace metal contamination. In response, given the great importance of the south-eastern drainage system in Bangladesh, a detailed evaluation of the human health risk as well as the potential ecological risk of trace metals (Be, Cd, Co, Cr, Cu, Hg, Ni, Pb, Se, V, Zn, and As) in Karnaphuli riverbed sediment was conducted. Mean levels of the elements in mg/kg were As (5.62 ± 1.47); Se (0.84 ± 0.61); Hg (0.37 ± 0.23); Be (1.17 ± 0.49); Pb (15.62 ± 8.42); Cd (0.24 ± 0.33); Co (11.59 ± 4.49); Cr (112.75 ± 40.09); Cu (192.67 ± 49.71); V (27.49 ± 10.95); Zn (366.83 ± 62.82); Ni (75.83 ± 25.87). Pollution indicators, specifically contamination factor (CF), pollution load index (PLI), degree of contamination (Cd), enrichment factor (EF), geo-accumulation index (Igeo), and potential ecological risk index (RI), were computed to assess sediment quality. For the first observation of health risk, chronic daily intake (CDI), hazard quotient (HQ), hazard index (HI), carcinogenic risk (CR) and total carcinogenic risk (TCR) indices were calculated. According to the results, CDI values through the ingestion route of both the adult and child groups were organized in the following descending mode respectively: Zn > Cu > Cr > Ni > V > Pb > Co > As > Se > Be > Cd > Hg. The non-carcinogenic risks were generally low for all routes of exposure, except HQingestion was slightly higher for both adults and children. The calculated hazard index (HI) was, nevertheless, within the permitted range (HI < 1). Similarly, none of the metals exhibited any carcinogenic risks, as all CR values were within the 10-4-10-6 range. The need for authoritative efforts and water policy for the sake of the surrounding ecosystem and human health in the vicinity of the examined watershed is strongly felt as an outcome of this study. The purpose of this study is to protect public health by identifying trace metal sources and reducing industrial and domestic discharge into this natural drainage system.

Trace metal exposure and human health consequences through consumption of market-available Oreochromis niloticus (L.) in Bangladesh

Using Oreochromis niloticus (L.), commonly known as tilapia, as a model, this study evaluated the exposure of trace metal and their risk assessment on human health. In addition, the status of amino acids, fatty acids, vital elements, and their benefits is also studied. Estimating the nutrient composition of fish muscle is necessary to ensure that it meets the requirements for human health, food regulations, and commercial specifications. The species examined contained appreciable concentrations of amino acids, fatty acid content, and minerals, suggesting that the fish species could be a good source of protein, fat, and minerals. Hazardous heavy metals were found to be lower compared to their corresponding maximum tolerable limits. The order of trace metals is Zn (22,709 µg/kg) > Fe (19,878 µg/kg) > Cu (1261 µg /kg) > Mn (1228 µg/kg) > Cr (474 µg/kg) > Ni (152 µg/kg) As (318 µg /kg) > Pb (281 µg/kg) > Co (24 µg /kg) > Cd (13 µg/kg) > Hg (5 µg/kg); a number of health-related indices, including estimated daily intake (EDI), target hazard quotient (THQ), and hazard index (HI), as well as carcinogenic risk (CR) indices for adult and children, were calculated to evaluate the human health hazard of the heavy metals. The THQ and HI of heavy metals for tilapia are lower than 1, posing a non-carcinogenic threat to human health due to the biomagnifications of these deadly poisonous metals. Principal component, cluster, and correlation analyses delineated the common probabilistic sources of metal contamination origin and significant inter-parameter associations. Although no human health risks for the consumption of tilapia was found, more attention must be paid for the monitoring of Oreochromis niloticus before entering the market.

Vertical distribution and contamination assessment of heavy metals in sediment cores of ship breaking area of Bangladesh

Vertical heavy metal profiling reflects the history of the deposition of metals and helps to understand the characteristics of accumulation in various layers of the sediment. Nevertheless, no previous studies in Bangladesh had focused on the vertical distribution of heavy metals in core sediments. In this study, vertical distribution, contamination level and potential ecological risks of six heavy metals (Zn, Cu, Pb, Cr, Ni, Mn) from the core sediment of ship breaking were assessed and compared with the non-ship breaking area of Bangladesh. The concentration (µg/g) of heavy metals in the 0-10 cm (surface), 10-20 cm (middle) and 20-30 cm (bottom) of sediment cores was as follows, respectively: Zn (35.54-100.68, 37.27-258.02, 42.78-66.45); Cu (16.38-75.25, 30.64-92.02, 34.99-52.98); Pb (4.84-132.08, BDL-204.48, BDL-23.51); Cr (14.57-42.13, 25.31-42.71, 15.26-36.34); Ni (4.02-42.23, 4.94-43.70, 4.40-43.13); Mn (198.74-764.16, 257.77-980.50, 255.62-856.44). The heavy metal content of core sediment from the shipbreaking region was substantially higher than that of non-shipbreaking area. Except for Ni, heavy metal content was highest in the middle layer, followed by the upper and lower layers of the sediment core. Contamination exponents such as enrichment factor, contamination factor and geo-accumulation index (Igeo) revealed contamination by Zn, Cu and Pb while potential ecological risk factor ([Formula: see text]) and risk index suggested low ecological risk by studied heavy metals except for Pb. Correlation matrix, cluster analysis and principal component analysis indicated that all studied heavy metals could have similar anthropogenic origins.

tRNA diversification among uncultured archeon clones

Whole genome sequences (DNA sequences) of four uncultured archeon clones (1B6:CR626858.1, 4B7:CR626856.1, 22i07:JQ768096.1 and 19c08:JQ768095.1) were collected from NCBI BioSample database for the construction of digital data on tRNA. tRNAscan-SE 2.0 and ENDMEMO tools were used to identify and sketch tRNA structure as well as calculate Guanine-Cytosine (GC) percentage respectively. Eight true/functional tRNAs were identified from above 4 sequences which showed cove score greater than 20% with no variable loop. The tRNAs from the uncultured archeon clones were classified as Ala, Arg, Ile, Thr, Pro and Val type tRNA with cove score ranging from 34.22%-79.03%. The range of GC content was found 42.89%-56.91%; while tRNA contributed GC content ranging from 52%-64.86% to the total GC content in these sequences. The data fabricated in this study could be very useful for studying the diversity of tRNA among prokaryotes.

Multiple Biliary Hamartomas (von Meyenburg complexes) - A Case Report

Multiple biliary hamartoma (MBH) is a rare cause of multiple benign hepatic lesions. The condition is also known as von Meyenburg complexes, multiple bile duct hamartomas and biliary microhamartomas. MBH is asymptomatic and usually found incidentally where it is important to differentiate from other causes of multiple liver lesions particularly liver metastases. Histologically, they consist of cystic dilatation of the bile duct, encompassed by fibrous stroma. We reported a 74 year old male patient with multiple hepatic lesions which ultrasonographic appearance suggested multiple hepatic cysts. The diagnosis of MBH was made by MRCP of whole abdomen. Recognition of this unusual lesion is essential to avoid confusion with other cystic tumors of the liver specially liver metastases and to learn more about its natural history and response to treatment.Pulse Vol.9 January-December 2016 p.60-63

Genomics dataset on unclassified published organism (patent US 7547531)

Nucleotide (DNA) sequence analysis provides important clues regarding the characteristics and taxonomic position of an organism. With the intention that, DNA sequence analysis is very crucial to learn about hierarchical classification of that particular organism. This dataset (patent US 7547531) is chosen to simplify all the complex raw data buried in undisclosed DNA sequences which help to open doors for new collaborations. In this data, a total of 48 unidentified DNA sequences from patent US 7547531 were selected and their complete sequences were retrieved from NCBI BioSample database. Quick response (QR) code of those DNA sequences was constructed by DNA BarID tool. QR code is useful for the identification and comparison of isolates with other organisms. AT/GC content of the DNA sequences was determined using ENDMEMO GC Content Calculator, which indicates their stability at different temperature. The highest GC content was observed in GP445188 (62.5%) which was followed by GP445198 (61.8%) and GP445189 (59.44%), while lowest was in GP445178 (24.39%). In addition, New England BioLabs (NEB) database was used to identify cleavage code indicating the 5, 3 and blunt end and enzyme code indicating the methylation site of the DNA sequences was also shown. These data will be helpful for the construction of the organisms’ hierarchical classification, determination of their phylogenetic and taxonomic position and revelation of their molecular characteristics.

A case report of spinal intramedullary lipoma

3 months old boy presented with inablility to move upper limb and cries on touching the upper limb from 1 week of age. On examination reflexes were absent in upper limb but hyper reflexia was found in lower limb. Cervical and brain MRI revealed expansion of the cervical spinal canal with smoothly marginated mass within the cervical cord which is hyperintense in T1WI, T2WI and completely loses its signal intensity in FS and gradient weighted sequences. There was no diffusion restriction and appears mostly intramedullary. MRI features were consistent with intramedullary lipoma in cervical spinal cord.Pulse Vol.7 January-December 2014 p.50-52

Uterine artery pseudoaneurysm after cesarean section: case report

Uterine artery pseudoaneurysm (UAP) occurs rarely and can develop after various gynecologic or obstetric procedures. The delayed diagnosis of this disease often results in life-threatening hemorrhage. Here is described a case of UAP after cesarean section. The patient visited gynecology outpatient department of AHD 60 days after cesarean section done outside AHD because of abnormal per vaginal bleeding. After her cesarean section she had undergone laparotomy outside AHD for post partum haemorrhage but those papers were not available. From there she was sent to our radiology department for color Doppler TVS examination and here she was diagnosed as a case of UAP using color Doppler ultrasonography. The most frequent cause of UAP is cesarean section, which accounted for 47.4% of all cases. Previous studies show that the definitive diagnosis was made at angiography (41.2%), computed tomography (29.4%), or color doppler ultrasonography (29.4%). Almost all cases (94.1%) were conservatively treated with transcatheter uterine artery embolization. Consideration of UAP in the differential diagnosis is crucial for proper treatment before rupture and to preserve fertility.Pulse Vol.7 January-December 2014 p.56-60

In Silico Modeling and Immunoinformatics Probing Disclose the Epitope Based PeptideVaccine Against Zika Virus Envelope Glycoprotein

Zika virus (ZIKV) is an aedes mosquito borne pathogen belonging to the member of flaviviridae subgroup is the causative agent of an emerging disease called Zika fever, known as a benign infection usually presenting as influenza like illness with cutaneous rash. Due to recent epidemic outbreaks it is realized as a major health risk which need enhanced surveillance, but no attempt has been made to design an epitope based peptide vaccine against Zika virus. Viral envelope proteins are derived from host cell membrane proteins with some viral glycoproteins and are used to cover their protective protein capsid, help the viruses to enter host cells and help them to avoid the host immune response. In this study, amino acid sequence of ZIKV envelope glycoprotein was obtained from a protein database and examined with in silico approaches to determine the most immunogenic epitopes for B cell and T cell which could induce humoral as well as cell mediated immune response. Both the linear and conformational epitopes for B cell were predicted by immunoinformatics tools housed in IEDB resources. The peptide sequence DAHAKRQTVVVLGSQEGAV from position 121 and peptide sequence from 117-137 amino acids were predicted as most potential B cell linear and conformational epitopes respectively. Epitopes for CD4+ and CD8+ T cell were also predicted by using tools within IEDB resource and peptide sequence MMLELDPPF from position 250-258 amino acids was predicted as most immunogenic CD8+ T cell epitope with immune response evoking ability prediction score (I pMHC) of 0.09139 and conservancy of 52.17%. The innate immune response for ZIKV envelope glycoprotein was determined by interferon (IFN)-gamma effectuation and mimicking capacity by immunoinformatics and molecular docking study respectively. However, this is an introductory approach to design an epitope based peptide vaccine against Zika virus; we hope this model will be very much helpful in designing and predicting novel vaccine candidate.

Uterine Didelphys Associated With Obstructed Hemivagina and Ipsilateral Renal Anomaly (OHVIRA) Syndrome: a Case Report

A 30 year old nulligravida female reported to the fertility centre of AHD with the complaints of primary infertility for three and half years and spasmodic dysmenorrhoea. There is also history of progressively increasing right lower abdominal pain as well as discomfort which was cyclically associated with the onset of menses. Transabdominal sonography showed-‘Endometrial splitting into two at the fundus–suggesting bicornuate uterus. Echogenic soft tissue in the cervical canal due to blood clots. Non visualized right kidney. Mildly enlarged left kidney’. HSG done outside AHD suggestive of unicornuate uterus with single fallopian tube. IVU showed non visualized right kidney. Normally excreting left kidney. TVS showed normal sized septated nulliparus uterus with homogeneous myometrium and thick endometrium with proliferative phase echo. Mildly enlarged right ovary with mildly distended right tube. Mild collection adjacent to the vagina. Then the patient came to the gynaecology dept of AHD from where she was sent to our Radiology department to undergo MRI of pelvis. The MRI showed uterine didelphys. Obstructed hemivagina (right) with hematocolpos extended upto pelvic brim along right and posterior aspect of uterus through anomalous dilated remnant of right lower ureter with ipsilateral renal agenesis. Patient was diagnosed as OHVIRA syndrome radiologically. DOI: http://dx.doi.org/10.3329/pulse.v6i1-2.20358 Pulse Vol.6 January-December 2013 p.66-69

Reasons for non-uptake of referral: children with disabilities identified through the Key Informant Method in Bangladesh

PURPOSE

To identify reasons for the non-uptake of referral for children with disability identified though the Key Informant Method in Bangladesh.

METHOD

Core data was collected and analysed using qualitative methodologies. Fifty-one semi-structured interviews were completed with parent(s) of children who had attended a screening camp at the invitation of a Key Informant, but had not taken up their subsequent referral for health or rehabilitative services. Thematic analysis of the interview data resulted in emerging trends that were critically analysed according to the research objective.

RESULTS

Seven thematic reasons for non-uptake of referral were identified: severity of the disability; family and community; direct and associated cost; location of referral; negative camp experience; deliberate non-uptake; and procedural problems. Parents often discussed multiple reasons for non-uptake, interrelating socio-cultural, logistical and experiential factors.

CONCLUSION

Understanding the reasons for the parents of children with disability not taking up referral is important for the design and implementation of appropriate, relevant and contextual medical and rehabilitative services. The role of Key Informants may be developed from case detection, to include facilitation of effective and efficient uptake of services.

IMPLICATIONS FOR REHABILITATION

Programmes to identify children with disability and facilitate subsequent rehabilitation or treatment need to have extensive pre-planned strategies for referral mechanisms and follow up. Although Key Informants were not the focus of investigation, the present study suggests that there is potential for the role of the Key Informants to be extended beyond that of a case detection, to inform and facilitate referral processes and encourage the uptake of services.

Computer-assisted pre- and postoperative evaluation of surgically assisted rapid maxillary expansion

OBJECTIVE

Computer-assisted methods were used to evaluate different variants of surgically assisted rapid maxillary expansion (SARME) in terms of bone repositioning, new bone formation in the osteotomy gap, and bone quality before and after surgery.

MATERIALS AND METHODS

Twenty-nine patients (18 male, 11 female) with a mean age of 29 years (16 to 44 years) were included in the study. Surgically assisted rapid maxillary expansion with Le Fort I osteotomy was performed in all patients studied. High-resolution computed tomography (CT) was carried out directly before and 6 to 8 weeks after surgery. After registration of the preoperative CT data on the postoperative data, 3D models were constructed and superimposed. New bone formation in the osteotomy gap was visualized by means of a visualization procedure developed specifically for this purpose. Bone quality was analyzed by dividing the models into different anatomical segments. A qualitative comparison of the data was accomplished using a direct volume rendering procedure with a special transfer function. A quantitative comparison was carried out based on the pre- and postoperative histograms of each region.

RESULTS

Maxillary widening was confirmed in all patients by computer-assisted analysis. Four patients exhibited significant maxillary asymmetry after surgery. New bone formation within the osteotomy gap was irregular along the osteotomy lines but often symmetrical on both sides. The more symmetrical the osteotomy, the more symmetrical the new bone formation proved to be. In all but two cases, the postoperative qualitative and quantitative analyses showed a significant decrease in Hounsfield units, particularly in the vestibular bone.

CONCLUSION

The differences in new bone formation in the osteotomy gap suggest that the type of surgical technique and distractor used influence the outcome. Our results indicate that SAME results in a decrease in bone quality, particularly in the vestibular bone. Computer-assisted analysis clearly results in an information gain.

Molecular Cloning of a Novel Bradykinin-Related Peptide from the Skin of Indian Bronzed Frog Hylarana Temporalis

Bradykinin-related peptides (BRPs) constitute one of the most studied groups of bioactive peptides in amphibian skin secretions. The present study describes the successful isolation of a novel BRP (hylaranakinin TE) from the skin secretion of the Indian bronzed frog Hylarana temporalis. The deduced open reading frame consisted of 115 amino acid residues with a putative signal peptide of 22 amino acid residues, followed by a spacer region and mature peptide regions that encode for two BRPs: a canonical bradykinin R-9-R with a C-terminal extension of FVPASSL and Thr6-BK. The Thr6-BK reported in the present study had an unusual FP-insertion in the N-terminal part and ended in FAPEII, which is very different from the IAPAIV sequence reported in other ranid frogs. Unlike the mammalian bradykinin and its precursor, amphibian BRPs and their precursors are extremely variable, as evident from the present study. This forms the first report of BRPs from Hylarana temporalis, endemic to India and Sri Lanka.