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Lenatti M, Carlevaro A, Guergachi A, Keshavjee K, Mongelli M, Paglialonga A. A novel method to derive personalized minimum viable recommendations for type 2 diabetes prevention based on counterfactual explanations. PLoS One 2022; 17:e0272825. [PMCID: PMC9671330 DOI: 10.1371/journal.pone.0272825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Accepted: 11/02/2022] [Indexed: 11/19/2022] Open
Abstract
Despite the growing availability of artificial intelligence models for predicting type 2 diabetes, there is still a lack of personalized approaches to quantify minimum viable changes in biomarkers that may help reduce the individual risk of developing disease. The aim of this article is to develop a new method, based on counterfactual explanations, to generate personalized recommendations to reduce the one-year risk of type 2 diabetes. Ten routinely collected biomarkers extracted from Electronic Medical Records of 2791 patients at low risk and 2791 patients at high risk of type 2 diabetes were analyzed. Two regions characterizing the two classes of patients were estimated using a Support Vector Data Description classifier. Counterfactual explanations (i.e., minimal changes in input features able to change the risk class) were generated for patients at high risk and evaluated using performance metrics (availability, validity, actionability, similarity, and discriminative power) and a qualitative survey administered to seven expert clinicians. Results showed that, on average, the requested minimum viable changes implied a significant reduction of fasting blood sugar, systolic blood pressure, and triglycerides and a significant increase of high-density lipoprotein in patients at risk of diabetes. A significant reduction in body mass index was also recommended in most of the patients at risk, except in females without hypertension. In general, greater changes were recommended in hypertensive patients compared to non-hypertensive ones. The experts were overall satisfied with the proposed approach although in some cases the proposed recommendations were deemed insufficient to reduce the risk in a clinically meaningful way. Future research will focus on a larger set of biomarkers and different comorbidities, also incorporating clinical guidelines whenever possible. Development of additional mathematical and clinical validation approaches will also be of paramount importance.
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Affiliation(s)
- Marta Lenatti
- Institute of Electronics, Information Engineering and Telecommunications (IEIIT), National Research Council of Italy (CNR), Rome, Italy
| | - Alberto Carlevaro
- Institute of Electronics, Information Engineering and Telecommunications (IEIIT), National Research Council of Italy (CNR), Rome, Italy
- Department of Electrical, Electronics and Telecommunications Engineering and Naval Architecture (DITEN), University of Genoa, Genoa, Italy
| | - Aziz Guergachi
- Ted Rogers School of Management, Toronto Metropolitan University, Toronto, Canada
- Ted Rogers School of Information Technology Management, Toronto Metropolitan University, Toronto, Canada
- Department of Mathematics and Statistics, York University, Toronto, Canada
| | - Karim Keshavjee
- Institute of Health Policy, Management and Evaluation, Dalla Lana School of Public Health, University of Toronto, Toronto, Canada
- * E-mail:
| | - Maurizio Mongelli
- Institute of Electronics, Information Engineering and Telecommunications (IEIIT), National Research Council of Italy (CNR), Rome, Italy
| | - Alessia Paglialonga
- Institute of Electronics, Information Engineering and Telecommunications (IEIIT), National Research Council of Italy (CNR), Rome, Italy
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Lenatti M, Carlevaro A, Keshavjee K, Guergachi A, Paglialonga A, Mongelli M. Characterization of Type 2 Diabetes Using Counterfactuals and Explainable AI. Stud Health Technol Inform 2022; 294:98-103. [PMID: 35612024 DOI: 10.3233/shti220404] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Type 2 diabetes mellitus is a metabolic disorder of glucose management, whose prevalence is increasing inexorably worldwide. Adherence to therapies, along with a healthy lifestyle can help prevent the onset of disease. This preliminary study proposes the use of explainable artificial intelligence techniques with the aim of (i) characterizing diabetic patients through a set of easily interpretable rules and (ii) providing individualized recommendations for the prevention of the onset of the disease through the generation of counterfactual explanations, based on minimal variations of biomarkers routinely collected in primary care. The results of this preliminary study parallel findings from the literature as differences in biomarkers between patients with and without diabetes are observed for fasting blood sugar, body mass index, and high-density lipoprotein levels.
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Affiliation(s)
- Marta Lenatti
- National Research Council of Italy (CNR), Institute of Electronics, Information Engineering and Telecommunications (IEIIT), Italy
| | - Alberto Carlevaro
- National Research Council of Italy (CNR), Institute of Electronics, Information Engineering and Telecommunications (IEIIT), Italy.,University of Genoa, Department of Electrical, Electronics and Telecommunications Engineering and Naval Architecture (DITEN), Italy
| | - Karim Keshavjee
- University of Toronto, Institute of Health Policy, Management and Evaluation, Dalla Lana School of Public Health, Canada
| | - Aziz Guergachi
- Ryerson University, Ted Rogers School of Management, Toronto, Canada.,York University, Department of Mathematics and Statistics, Toronto, Canada
| | - Alessia Paglialonga
- National Research Council of Italy (CNR), Institute of Electronics, Information Engineering and Telecommunications (IEIIT), Italy
| | - Maurizio Mongelli
- National Research Council of Italy (CNR), Institute of Electronics, Information Engineering and Telecommunications (IEIIT), Italy
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Porro E, Santi F, Moretti A, Pollastro M, Zolezzi A, Carlevaro A, Figini E, Magliano P, Serra G. [Problem of high-risk pregnancy: comparison of 8 screening systems applied simultaneously to a sample of 484 pregnancies]. Ann Ostet Ginecol Med Perinat 1978; 99:349-93. [PMID: 754604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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Cottafava F, Carlevaro A, Anselmi L, Bertolotto M. [Kaposi's sarcoma. Report on a case treated with peptichemio]. Minerva Pediatr 1977; 29:247-52. [PMID: 846469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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