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Dieris M, Kowatschew D, Hassenklöver T, Manzini I, Korsching SI. Calcium imaging of adult olfactory epithelium reveals amines as important odor class in fish. Cell Tissue Res 2024; 396:95-102. [PMID: 38347202 PMCID: PMC10997700 DOI: 10.1007/s00441-024-03859-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Accepted: 12/29/2023] [Indexed: 04/06/2024]
Abstract
The odor space of aquatic organisms is by necessity quite different from that of air-breathing animals. The recognized odor classes in teleost fish include amino acids, bile acids, reproductive hormones, nucleotides, and a limited number of polyamines. Conversely, a significant portion of the fish olfactory receptor repertoire is composed of trace amine-associated receptors, generally assumed to be responsible for detecting amines. Zebrafish possess over one hundred of these receptors, but the responses of olfactory sensory neurons to amines have not been known so far. Here we examined odor responses of zebrafish olfactory epithelial explants at the cellular level, employing calcium imaging. We report that amines elicit strong responses in olfactory sensory neurons, with a time course characteristically different from that of ATP-responsive (basal) cells. A quantitative analysis of the laminar height distribution shows amine-responsive cells undistinguishable from ciliated neurons positive for olfactory marker protein. This distribution is significantly different from those measured for microvillous neurons positive for transient receptor potential channel 2 and basal cells positive for proliferating cell nuclear antigen. Our results suggest amines as an important odor class for teleost fish.
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Affiliation(s)
- M Dieris
- Institute of Genetics, Faculty of Mathematics and Natural Sciences of the University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - D Kowatschew
- Institute of Genetics, Faculty of Mathematics and Natural Sciences of the University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - T Hassenklöver
- Institute of Neurophysiology and Cellular Biophysics, University of Göttingen, Göttingen Germany, and Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB), Göttingen, Germany
- Current address: Department of Animal Physiology and Molecular Biomedicine, Institute of Animal Physiology, Justus-Liebig-University Gießen, Gießen, Germany
| | - I Manzini
- Institute of Neurophysiology and Cellular Biophysics, University of Göttingen, Göttingen Germany, and Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB), Göttingen, Germany
- Current address: Department of Animal Physiology and Molecular Biomedicine, Institute of Animal Physiology, Justus-Liebig-University Gießen, Gießen, Germany
| | - S I Korsching
- Institute of Genetics, Faculty of Mathematics and Natural Sciences of the University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany.
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Kowatschew D, Bozorg Nia S, Hassan S, Ustinova J, Weth F, Korsching SI. Spatial organization of olfactory receptor gene choice in the complete V1R-related ORA family of zebrafish. Sci Rep 2022; 12:14816. [PMID: 36045218 PMCID: PMC9433392 DOI: 10.1038/s41598-022-17900-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 08/02/2022] [Indexed: 11/12/2022] Open
Abstract
The vertebrate sense of smell employs four main receptor families for detection of odors, among them the V1R/ORA family, which is unusually small and highly conserved in teleost fish. Zebrafish possess just seven ORA receptors, enabling a comprehensive analysis of the expression patterns of the entire family. The olfactory organ of zebrafish is representative for teleosts, cup-shaped, with lamella covered with sensory epithelium protruding into the cup from a median raphe. We have performed quantitative in situ hybridization on complete series of horizontal cryostat sections of adult zebrafish olfactory organ, and have analysed the location of ora-expressing cells in three dimensions, radial diameter, laminar height, and height-within-the-organ. We report broadly overlapping, but distinctly different distributions for all ora genes, even for ora3a and ora3b, the most recent gene duplication. Preferred positions in different dimensions are independent of each other. This spatial logic is very similar to previous reports for the much larger families of odorant receptor (or) and V2R-related olfC genes in zebrafish. Preferred positions for ora genes tend to be more central and more apical than those we observed for these other two families, consistent with expression in non-canonical sensory neuron types.
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Affiliation(s)
- Daniel Kowatschew
- Institute of Genetics, Mathematical-Natural Sciences Faculty of the University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Shahrzad Bozorg Nia
- Institute of Genetics, Mathematical-Natural Sciences Faculty of the University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Shahzaib Hassan
- Institute of Genetics, Mathematical-Natural Sciences Faculty of the University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Jana Ustinova
- Zoological Institute, Department of Cell- and Neurobiology, Karlsruhe Institute of Technology, Fritz-Haber-Weg 4, 76131, Karlsruhe, Germany
| | - Franco Weth
- Zoological Institute, Department of Cell- and Neurobiology, Karlsruhe Institute of Technology, Fritz-Haber-Weg 4, 76131, Karlsruhe, Germany
| | - Sigrun I Korsching
- Institute of Genetics, Mathematical-Natural Sciences Faculty of the University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany.
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Abstract
Nucleotides are an important class of odorants for aquatic vertebrates such as frogs and fishes, but also have manifold signaling roles in other cellular processes. Recently, an adenosine receptor believed to belong to the adora2 clade has been identified as an olfactory receptor in zebrafish. Here, we set out to elucidate the evolutionary history of both this gene and its olfactory function. We have performed a thorough phylogenetic study in vertebrates, chordates and their sister group, ambulacraria, and show that the origin of the zebrafish olfactory receptor gene can be traced back to the most recent common ancestor of all three groups as a segregate sister clade (adorb) to the adora gene family. Eel, carp, and clawed frog all express adorb in a sparse and distributed pattern within their olfactory epithelium very similar to the pattern observed for zebrafish that is, consistent with a function as olfactory receptor. In sharp contrast, lamprey adorb-expressing cells are absent from the sensory region of the lamprey nose, but form a contiguous domain directly adjacent to the sensory region. Double-labeling experiments confirmed the expression of lamprey adorb in nonneuronal cells and are consistent with an expression in neuronal progenitor cells. Thus, adorb may have undergone a switch of function in the jawed lineage of vertebrates towards a role as olfactory receptor.
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Affiliation(s)
- Daniel Kowatschew
- Institute of Genetics, Faculty of Mathematics and Natural Sciences, University of Cologne, Germany
| | - Sigrun I Korsching
- Institute of Genetics, Faculty of Mathematics and Natural Sciences, University of Cologne, Germany
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Dieris M, Kowatschew D, Korsching SI. Olfactory function in the trace amine-associated receptor family (TAARs) evolved twice independently. Sci Rep 2021; 11:7807. [PMID: 33833329 PMCID: PMC8032801 DOI: 10.1038/s41598-021-87236-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Accepted: 03/18/2021] [Indexed: 11/23/2022] Open
Abstract
Olfactory receptor families have arisen independently several times during evolution. The origin of taar genes, one of the four major vertebrate olfactory receptor families, is disputed. We performed a phylogenetic analysis making use of 96 recently available genomes, and report that olfactory functionality has arisen twice independently within the TAAR family, once in jawed and once in jawless fish. In lamprey, an ancestral gene expanded to generate a large family of olfactory receptors, while the sister gene in jawed vertebrates did not expand and is not expressed in olfactory sensory neurons. Both clades do not exhibit the defining TAAR motif, and we suggest naming them taar-like receptors (tarl). We have identified the evolutionary origin of both taar and tarl genes in a duplication of the serotonergic receptor 4 that occurred in the most recent common ancestor of vertebrates. We infer two ancestral genes in bony fish (TAAR12, TAAR13) which gave rise to the complete repertoire of mammalian olfactory taar genes and to class II of the taar repertoire of teleost fish. We follow their evolution in seventy-one bony fish genomes and report a high evolutionary dynamic, with many late gene birth events and both early and late gene death events.
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Affiliation(s)
- Milan Dieris
- Institute for Genetics, University At Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Daniel Kowatschew
- Institute for Genetics, University At Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Sigrun I Korsching
- Institute for Genetics, University At Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany.
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von Twickel A, Kowatschew D, Saltürk M, Schauer M, Robertson B, Korsching S, Walkowiak W, Grillner S, Pérez-Fernández J. Individual Dopaminergic Neurons of Lamprey SNc/VTA Project to Both the Striatum and Optic Tectum but Restrict Co-release of Glutamate to Striatum Only. Curr Biol 2019; 29:677-685.e6. [DOI: 10.1016/j.cub.2019.01.004] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Revised: 11/23/2018] [Accepted: 01/02/2019] [Indexed: 10/27/2022]
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Ahuja G, Reichel V, Kowatschew D, Syed AS, Kotagiri AK, Oka Y, Weth F, Korsching SI. Overlapping but distinct topology for zebrafish V2R-like olfactory receptors reminiscent of odorant receptor spatial expression zones. BMC Genomics 2018; 19:383. [PMID: 29792162 PMCID: PMC5966872 DOI: 10.1186/s12864-018-4740-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2017] [Accepted: 04/30/2018] [Indexed: 11/23/2022] Open
Abstract
Background The sense of smell is unrivaled in terms of molecular complexity of its input channels. Even zebrafish, a model vertebrate system in many research fields including olfaction, possesses several hundred different olfactory receptor genes, organized in four different gene families. For one of these families, the initially discovered odorant receptors proper, segregation of expression into distinct spatial subdomains within a common sensory surface has been observed both in teleost fish and in mammals. However, for the remaining three families, little to nothing was known about their spatial coding logic. Here we wished to investigate, whether the principle of spatial segregation observed for odorant receptors extends to another olfactory receptor family, the V2R-related OlfC genes. Furthermore we thought to examine, how expression of OlfC genes is integrated into expression zones of odorant receptor genes, which in fish share a single sensory surface with OlfC genes. Results To select representative genes, we performed a comprehensive phylogenetic study of the zebrafish OlfC family, which identified a novel OlfC gene, reduced the number of pseudogenes to 1, and brought the total family size to 60 intact OlfC receptors. We analyzed the spatial pattern of OlfC-expressing cells for seven representative receptors in three dimensions (height within the epithelial layer, horizontal distance from the center of the olfactory organ, and height within the olfactory organ). We report non-random distributions of labeled neurons for all OlfC genes analysed. Distributions for sparsely expressed OlfC genes are significantly different from each other in nearly all cases, broad overlap notwithstanding. For two of the three coordinates analyzed, OlfC expression zones are intercalated with those of odorant receptor zones, whereas in the third dimension some segregation is observed. Conclusion Our results show that V2R-related OlfC genes follow the same spatial logic of expression as odorant receptors and their expression zones intermingle with those of odorant receptor genes. Thus, distinctly different expression zones for individual receptor genes constitute a general feature shared by teleost and tetrapod V2R/OlfC and odorant receptor families alike. Electronic supplementary material The online version of this article (10.1186/s12864-018-4740-8) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Gaurav Ahuja
- Institute of Genetics, University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany. .,Present address: Center for Molecular Medicine Cologne (ZMMK), Robert-Koch-Str. 21, 50931, Cologne, Germany. .,Present address: Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931, Cologne, Germany.
| | - Vera Reichel
- Institute of Genetics, University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Daniel Kowatschew
- Institute of Genetics, University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Adnan S Syed
- Institute of Genetics, University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Aswani Kumar Kotagiri
- Institute of Genetics, University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany
| | - Yuichiro Oka
- Institute of Genetics, University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany.,Present address: Department of Anatomy and Neuroscience, Graduate School of Medicine, Osaka University, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.,Present address: Department of Child Development, United Graduate School of Child Development, Osaka University, Kanazawa University, Hamamatsu University School of Medicine, Chiba University and University of Fukui, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan
| | - Franco Weth
- Karlsruher Institut fuer Technologie (KIT) - Campus Sued, Zoologisches Institut, Abteilung fuer Zell- und Neurobiologie, Fritz-Haber-Weg 4, 76131, Karlsruhe, Germany
| | - Sigrun I Korsching
- Institute of Genetics, University at Cologne, Zülpicher Str. 47A, 50674, Cologne, Germany.
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