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Sklute EC, Leopo DA, Neat KA, Livi KJT, Dyar MD, Holden JF. Fe(III) (oxyhydr)oxide reduction by the thermophilic iron-reducing bacterium Desulfovulcanus ferrireducens. Front Microbiol 2023; 14:1272245. [PMID: 37928658 PMCID: PMC10622975 DOI: 10.3389/fmicb.2023.1272245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Accepted: 09/19/2023] [Indexed: 11/07/2023] Open
Abstract
Some thermophilic bacteria from deep-sea hydrothermal vents grow by dissimilatory iron reduction, but our understanding of their biogenic mineral transformations is nascent. Mineral transformations catalyzed by the thermophilic iron-reducing bacterium Desulfovulcanus ferrireducens during growth at 55°C were examined using synthetic nanophase ferrihydrite, akaganeite, and lepidocrocite separately as terminal electron acceptors. Spectral analyses using visible-near infrared (VNIR), Fourier-transform infrared attenuated total reflectance (FTIR-ATR), and Mössbauer spectroscopies were complemented with x-ray diffraction (XRD) and transmission electron microscopy (TEM) using selected area electron diffraction (SAED) and energy dispersive X-ray (EDX) analyses. The most extensive biogenic mineral transformation occurred with ferrihydrite, which produced a magnetic, visibly dark mineral with spectral features matching cation-deficient magnetite. Desulfovulcanus ferrireducens also grew on akaganeite and lepidocrocite and produced non-magnetic, visibly dark minerals that were poorly soluble in the oxalate solution. Bioreduced mineral products from akaganeite and lepidocrocite reduction were almost entirely absorbed in the VNIR spectroscopy in contrast to both parent minerals and the abiotic controls. However, FTIR-ATR and Mössbauer spectra and XRD analyses of both biogenic minerals were almost identical to the parent and control minerals. The TEM of these biogenic minerals showed the presence of poorly crystalline iron nanospheres (50-200 nm in diameter) of unknown mineralogy that were likely coating the larger parent minerals and were absent from the controls. The study demonstrated that thermophilic bacteria transform different types of Fe(III) (oxyhydr)oxide minerals for growth with varying mineral products. These mineral products are likely formed through dissolution-reprecipitation reactions but are not easily predictable through chemical equilibrium reactions alone.
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Affiliation(s)
- Elizabeth C Sklute
- Planetary Science Institute, Tucson, AZ, United States
- Los Alamos National Laboratory, Los Alamos, NM, United States
| | - Deborah A Leopo
- Department of Microbiology, University of Massachusetts, Amherst, MA, United States
| | - Kaylee A Neat
- Department of Astronomy, Mount Holyoke College, South Hadley, MA, United States
| | - Kenneth J T Livi
- Department of Materials Science and Engineering, Johns Hopkins University, Baltimore, MD, United States
| | - M Darby Dyar
- Planetary Science Institute, Tucson, AZ, United States
- Department of Astronomy, Mount Holyoke College, South Hadley, MA, United States
| | - James F Holden
- Department of Microbiology, University of Massachusetts, Amherst, MA, United States
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Kashyap S, Sklute EC, Wang P, Tague TJ, Dyar MD, Holden JF. Spectral Detection of Nanophase Iron Minerals Produced by Fe(III)-Reducing Hyperthermophilic Crenarchaea. Astrobiology 2023; 23:43-59. [PMID: 36070586 PMCID: PMC9810357 DOI: 10.1089/ast.2022.0042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 08/01/2022] [Indexed: 06/15/2023]
Abstract
Mineral transformations by two hyperthermophilic Fe(III)-reducing crenarchaea, Pyrodictium delaneyi and Pyrobaculum islandicum, were examined using synthetic nanophase ferrihydrite, lepidocrocite, and akaganeite separately as terminal electron acceptors and compared with abiotic mineral transformations under similar conditions. Spectral analyses using visible-near-infrared, Fourier-transform infrared attenuated total reflectance (FTIR-ATR), Raman, and Mössbauer spectroscopies were complementary and revealed formation of various biomineral assemblages distinguishable from abiotic phases. The most extensive biogenic mineral transformation occurred with ferrihydrite, which formed primarily magnetite with spectral features similar to biomagnetite relative to a synthetic magnetite standard. The FTIR-ATR spectra of ferrihydrite bioreduced by P. delaneyi also showed possible cell-associated organics such as exopolysaccharides. Such combined detections of biomineral assemblages and organics might serve as biomarkers for hyperthermophilic Fe(III) reduction. With lepidocrocite, P. delaneyi produced primarily a ferrous carbonate phase reminiscent of siderite, and with akaganeite, magnetite and a ferrous phosphate phase similar to vivianite were formed. P. islandicum showed minor biogenic production of a ferrous phosphate similar to vivianite when grown on lepidocrocite, and a mixed valent phosphate or sulfate mineral when grown on akaganeite. These results expand the range of biogenic mineral transformations at high temperatures and identify spacecraft-relevant spectroscopies suitable for discriminating mineral biogenicity.
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Affiliation(s)
- Srishti Kashyap
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA
| | | | - Peng Wang
- Bruker Optics, Inc., Billerica, Massachusetts, USA
| | | | - M. Darby Dyar
- Planetary Science Institute, Tucson, Arizona, USA
- Department of Astronomy, Mount Holyoke College, South Hadley, Massachusetts, USA
| | - James F. Holden
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA
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Kashyap S, Sklute EC, Dyar MD, Holden JF. Reduction and Morphological Transformation of Synthetic Nanophase Iron Oxide Minerals by Hyperthermophilic Archaea. Front Microbiol 2018; 9:1550. [PMID: 30050524 PMCID: PMC6050373 DOI: 10.3389/fmicb.2018.01550] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Accepted: 06/21/2018] [Indexed: 11/24/2022] Open
Abstract
Fe(III) (oxyhydr)oxides are electron acceptors for some hyperthermophilic archaea in mildly reducing geothermal environments. However, the kinds of iron oxides that can be used, growth rates, extent of iron reduction, and the morphological changes that occur to minerals are poorly understood. The hyperthermophilic iron-reducing crenarchaea Pyrodictium delaneyi and Pyrobaculum islandicum were grown separately on six different synthetic nanophase Fe(III) (oxyhydr)oxides. For both organisms, growth on ferrihydrite produced the highest growth rates and the largest amounts of Fe(II), although P. delaneyi produced four times more Fe(II) (25 mM) than P. islandicum (6 mM). Both organisms grew on lepidocrocite and akaganéite and produced 2 and 3 mM Fe(II). Modest growth occurred for both organisms on goethite, hematite, and maghemite where ≤1 mM Fe(II) was produced. The diameters of the spherical mineral end-products following P. delaneyi growth increased by 30 nm for ferrihydrite and 50–150 nm for lepidocrocite relative to heated abiotic controls. For akaganéite, spherical particle sizes were the same for P. delaneyi-reacted samples and heated abiotic controls, but the spherical particles were more numerous in the P. delaneyi samples. For P. islandicum, there was no increase in grain size for the mineral end-products following growth on ferrihydrite, lepidocrocite, or akaganéite relative to the heated abiotic controls. High-resolution transmission electron microscopy of lattice fringes and selected-area electron diffraction of the minerals produced by both organisms when grown on ferrihydrite showed that magnetite and/or possibly maghemite were the end-products while the heated abiotic controls only contained ferrihydrite. These results expand the current view of bioavailable Fe(III) (oxyhydr)oxides for reduction by hyperthermophilic archaea when presented as synthetic nanophase minerals. They show that growth and reduction rates are inversely correlated with the iron (oxyhydr)oxide crystallinity and that iron (oxyhydr)oxide mineral transformation takes different forms for these two organisms.
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Affiliation(s)
- Srishti Kashyap
- Department of Microbiology, University of Massachusetts, Amherst, MA, United States
| | - Elizabeth C Sklute
- Department of Astronomy, Mount Holyoke College, South Hadley, MA, United States.,Planetary Science Institute, Tucson, AZ, United States
| | - M Darby Dyar
- Department of Astronomy, Mount Holyoke College, South Hadley, MA, United States.,Planetary Science Institute, Tucson, AZ, United States
| | - James F Holden
- Department of Microbiology, University of Massachusetts, Amherst, MA, United States
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Sklute EC, Rogers AD, Gregerson JC, Jensen HB, Reeder RJ, Dyar MD. Amorphous salts formed from rapid dehydration of multicomponent chloride and ferric sulfate brines: Implications for Mars. Icarus 2018; 302:285-295. [PMID: 29670302 PMCID: PMC5901898 DOI: 10.1016/j.icarus.2017.11.018] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Salts with high hydration states have the potential to maintain high levels of relative humidity (RH) in the near subsurface of Mars, even at moderate temperatures. These conditions could promote deliquescence of lower hydrates of ferric sulfate, chlorides, and other salts. Previous work on deliquesced ferric sulfates has shown that when these materials undergo rapid dehydration, such as that which would occur upon exposure to present day Martian surface conditions, an amorphous phase forms. However, the fate of deliquesced halides or mixed ferric sulfate-bearing brines are presently unknown. Here we present results of rapid dehydration experiments on Ca-, Na-, Mg- and Fe-chloride brines and multi-component (Fe2 (SO4)3 ± Ca, Na, Mg, Fe, Cl, HCO3) brines at ∼21°C, and characterize the dehydration products using visible/near-infrared (VNIR) reflectance spectroscopy, mid-infrared attenuated total reflectance spectroscopy, and X-ray diffraction (XRD) analysis. We find that rapid dehydration of many multicomponent brines can form amorphous solids or solids with an amorphous component, and that the presence of other elements affects the persistence of the amorphous phase under RH fluctuations. Of the pure chloride brines, only Fe-chloride formed an amorphous solid. XRD patterns of the multicomponent amorphous salts show changes in position, shape, and magnitude of the characteristic diffuse scattering observed in all amorphous materials that could be used to help constrain the composition of the amorphous salt. Amorphous salts deliquesce at lower RH values compared to their crystalline counterparts, opening up the possibility of their role in potential deliquescence-related geologic phenomena such as recurring slope lineae (RSLs) or soil induration. This work suggests that a wide range of aqueous mixed salt solutions can lead to the formation of amorphous salts and are possible for Mars; detailed studies of the formation mechanisms, stability and transformation behaviors of amorphous salts are necessary to further constrain their contribution to Martian surface materials.
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Affiliation(s)
- Elizabeth C. Sklute
- Department of Astronomy, Mount Holyoke College, 50 College St., South Hadley, MA 01075, USA
| | - A. Deanne Rogers
- Department of Geoscience, Stony Brook University, 255 Earth and Space Science Building, Stony Brook, NY 11794-2100, USA
| | - Jason C. Gregerson
- Department of Geoscience, Stony Brook University, 255 Earth and Space Science Building, Stony Brook, NY 11794-2100, USA
| | - Heidi B. Jensen
- Department of Geoscience, Stony Brook University, 255 Earth and Space Science Building, Stony Brook, NY 11794-2100, USA
| | - Richard J. Reeder
- Department of Geoscience, Stony Brook University, 255 Earth and Space Science Building, Stony Brook, NY 11794-2100, USA
| | - M. Darby Dyar
- Department of Astronomy, Mount Holyoke College, 50 College St., South Hadley, MA 01075, USA
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Sklute EC, Kashyap S, Dyar MD, Holden JF, Tague T, Wang P, Jaret SJ. Spectral and morphological characteristics of synthetic nanophase iron (oxyhydr)oxides. Phys Chem Miner 2018; 45:1-26. [PMID: 30135614 PMCID: PMC6101973 DOI: 10.1007/s00269-017-0897-y] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Nanophase iron (oxyhydr)oxides are ubiquitous on Earth, globally distributed on Mars, and likely present on numerous other rocky solar system bodies. They are often structurally and, therefore, spectrally distinct from iron (oxyhydr)oxide bulk phases. Because their spectra vary with grain size, they can be difficult to identify or distinguish unless multiple analysis techniques are used in tandem. Yet, most literature reports fail to use multiple techniques or adequately parameterize sample morphology, making it difficult to understand how morphology affects spectral characteristics across techniques. Here, we present transmission electron microscopy, Raman, visible and near-infrared, and mid-infrared attenuated total reflectance data on synthetic, nanophase akaganéite, lepidocrocite, goethite, hematite, ferrihydrite, magnetite, and maghemite. Feature positions are tabulated and compared to those for bulk (oxyhydr)oxides and other nanophase iron (oxyhydr)oxides from the literature. The utility and limitations of each technique in analyzing nanophase iron (oxyhydr)oxides are discussed. Raman, mid-infrared, and visible near-infrared spectra show broadening, loss of some spectral features, and shifted positions compared to bulk phases. Raman and mid-infrared spectroscopies are useful in identifying and distinguishing akaganéite, lepidocrocite, goethite, and hematite, though ferrihydrite, magnetite, and maghemite have overlapped band positions. Visible near-infrared spectroscopy can identify and distinguish among ferrihydrite, magnetite, and maghemite in pure spectra, though akaganéite, lepidocrocite, and goethite can have overlapping bands. It is clear from this work that further understanding of variable spectral features in nanophase iron (oxyhydr)oxides must await additional studies to robustly assess effects of morphology. This study establishes a template for future work.
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Affiliation(s)
- Elizabeth C. Sklute
- Department of Astronomy, Mount Holyoke College, 50 College St., South Hadley, MA 01075, USA
| | - Srishti Kashyap
- Department of Microbiology, University of Massachusetts, N418 Morrill Science Center IV North, 639 N. Pleasant St., Amherst, MA 01003, USA
| | - M. Darby Dyar
- Department of Astronomy, Mount Holyoke College, 50 College St., South Hadley, MA 01075, USA
- Planetary Science Institute, 1700 East Fort Lowell, Suite 106, Tucson, AZ 85719-2395, USA
| | - James F. Holden
- Department of Microbiology, University of Massachusetts, N418 Morrill Science Center IV North, 639 N. Pleasant St., Amherst, MA 01003, USA
| | - Thomas Tague
- Bruker Optics Inc., 19 Fortune Dr., Billerica, MA 01821, USA
| | - Peng Wang
- Bruker Optics Inc., 19 Fortune Dr., Billerica, MA 01821, USA
| | - Steven J. Jaret
- Department of Geoscience, Stony Brook University, 255 Earth and Space Science Building, Stony Brook, NY 11794-2100, USA
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Sklute EC, Eguchi M, Henderson CN, Angelone MS, Yennawar HP, Mallouk TE. Orientation of Diamagnetic Layered Transition Metal Oxide Particles in 1-Tesla Magnetic Fields. J Am Chem Soc 2011; 133:1824-31. [DOI: 10.1021/ja107090n] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Elizabeth C. Sklute
- Department of Chemistry, ‡Materials Research Institute, and §Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Miharu Eguchi
- Department of Chemistry, ‡Materials Research Institute, and §Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Camden N. Henderson
- Department of Chemistry, ‡Materials Research Institute, and §Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Mark S. Angelone
- Department of Chemistry, ‡Materials Research Institute, and §Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Hemant P. Yennawar
- Department of Chemistry, ‡Materials Research Institute, and §Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Thomas E. Mallouk
- Department of Chemistry, ‡Materials Research Institute, and §Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
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Tosca NJ, McLennan SM, Dyar MD, Sklute EC, Michel FM. Fe oxidation processes at Meridiani Planum and implications for secondary Fe mineralogy on Mars. ACTA ACUST UNITED AC 2008. [DOI: 10.1029/2007je003019] [Citation(s) in RCA: 57] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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