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Tarbashevich K, Ermlich L, Wegner J, Pfeiffer J, Raz E. The mitochondrial protein Sod2 is important for the migration, maintenance, and fitness of germ cells. Front Cell Dev Biol 2023; 11:1250643. [PMID: 37954204 PMCID: PMC10639133 DOI: 10.3389/fcell.2023.1250643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 10/16/2023] [Indexed: 11/14/2023] Open
Abstract
To maintain a range of cellular functions and to ensure cell survival, cells must control their levels of reactive oxygen species (ROS). The main source of these molecules is the mitochondrial respiration machinery, and the first line of defense against these toxic substances is the mitochondrial enzyme superoxide dismutase 2 (Sod2). Thus, investigating early expression patterns and functions of this protein is critical for understanding how an organism develops ways to protect itself against ROS and enhance tissue fitness. Here, we report on expression pattern and function of zebrafish Sod2, focusing on the role of the protein in migration and maintenance of primordial germ cells during early embryonic development. We provide evidence that Sod2 is involved in purifying selection of vertebrate germ cells, which can contribute to the fitness of the organism in the following generations.
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Affiliation(s)
- Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation (ZMBE), Muenster, Germany
| | - Laura Ermlich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation (ZMBE), Muenster, Germany
| | - Julian Wegner
- Institute of Cell Biology, Center for Molecular Biology of Inflammation (ZMBE), Muenster, Germany
| | - Jana Pfeiffer
- Institute of Cell Biology, Center for Molecular Biology of Inflammation (ZMBE), Muenster, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation (ZMBE), Muenster, Germany
- Max Planck Institute for Molecular Biomedicine, Münster, Germany
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Westerich KJ, Tarbashevich K, Schick J, Gupta A, Zhu M, Hull K, Romo D, Zeuschner D, Goudarzi M, Gross-Thebing T, Raz E. Spatial organization and function of RNA molecules within phase-separated condensates in zebrafish are controlled by Dnd1. Dev Cell 2023; 58:1578-1592.e5. [PMID: 37463577 PMCID: PMC10528888 DOI: 10.1016/j.devcel.2023.06.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Revised: 06/08/2023] [Accepted: 06/28/2023] [Indexed: 07/20/2023]
Abstract
Germ granules, condensates of phase-separated RNA and protein, are organelles that are essential for germline development in different organisms. The patterning of the granules and their relevance for germ cell fate are not fully understood. Combining three-dimensional in vivo structural and functional analyses, we study the dynamic spatial organization of molecules within zebrafish germ granules. We find that the localization of RNA molecules to the periphery of the granules, where ribosomes are localized, depends on translational activity at this location. In addition, we find that the vertebrate-specific Dead end (Dnd1) protein is essential for nanos3 RNA localization at the condensates' periphery. Accordingly, in the absence of Dnd1, or when translation is inhibited, nanos3 RNA translocates into the granule interior, away from the ribosomes, a process that is correlated with the loss of germ cell fate. These findings highlight the relevance of sub-granule compartmentalization for post-transcriptional control and its importance for preserving germ cell totipotency.
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Affiliation(s)
- Kim Joana Westerich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Jan Schick
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Antra Gupta
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Mingzhao Zhu
- Department of Chemistry & Biochemistry and The Baylor Synthesis and Drug-Lead Discovery Laboratory, Baylor University, Waco, TX 76706, USA
| | - Kenneth Hull
- Department of Chemistry & Biochemistry and The Baylor Synthesis and Drug-Lead Discovery Laboratory, Baylor University, Waco, TX 76706, USA
| | - Daniel Romo
- Department of Chemistry & Biochemistry and The Baylor Synthesis and Drug-Lead Discovery Laboratory, Baylor University, Waco, TX 76706, USA
| | - Dagmar Zeuschner
- Electron Microscopy Facility, Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany
| | - Mohammad Goudarzi
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Theresa Gross-Thebing
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany; Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany.
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Westerich KJ, Tarbashevich K, Schick J, Gupta A, Zhu M, Hull K, Romo D, Zeuschner D, Goudarzi M, Gross-Thebing T, Raz E. Spatial organization and function of RNA molecules within phase-separated condensates are controlled by Dnd1. bioRxiv 2023:2023.07.09.548244. [PMID: 37461638 PMCID: PMC10350045 DOI: 10.1101/2023.07.09.548244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/28/2023]
Abstract
Germ granules, condensates of phase-separated RNA and protein, are organelles essential for germline development in different organisms The patterning of the granules and its relevance for germ cell fate are not fully understood. Combining three-dimensional in vivo structural and functional analyses, we study the dynamic spatial organization of molecules within zebrafish germ granules. We find that localization of RNA molecules to the periphery of the granules, where ribosomes are localized depends on translational activity at this location. In addition, we find that the vertebrate-specific Dead end (Dnd1) protein is essential for nanos3 RNA localization at the condensates' periphery. Accordingly, in the absence of Dnd1, or when translation is inhibited, nanos3 RNA translocates into the granule interior, away from the ribosomes, a process that is correlated with loss of germ cell fate. These findings highlight the relevance of sub-granule compartmentalization for posttranscriptional control, and its importance for preserving germ cell totipotency.
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Affiliation(s)
- Kim Joana Westerich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
| | - Jan Schick
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
| | - Antra Gupta
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
| | - Mingzhao Zhu
- Department of Chemistry & Biochemistry and The Baylor Synthesis and Drug-Lead Discovery Laboratory, Baylor University, Waco, Texas 76706, United States
| | - Kenneth Hull
- Department of Chemistry & Biochemistry and The Baylor Synthesis and Drug-Lead Discovery Laboratory, Baylor University, Waco, Texas 76706, United States
| | - Daniel Romo
- Department of Chemistry & Biochemistry and The Baylor Synthesis and Drug-Lead Discovery Laboratory, Baylor University, Waco, Texas 76706, United States
| | - Dagmar Zeuschner
- Electron Microscopy Facility, Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany
| | - Mohammad Goudarzi
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
| | - Theresa Gross-Thebing
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
- Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany
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Westerich KJ, Reinecke S, Emich J, Wyrwoll MJ, Stallmeyer B, Meyer M, Oud MS, Fietz D, Pilatz A, Kliesch S, Reichman-Fried M, Tarbashevich K, Limon T, Stehling M, Friedrich C, Tüttelmann F, Raz E. Linking human Dead end 1 (DND1) variants to male infertility employing zebrafish embryos. Hum Reprod 2023; 38:655-670. [PMID: 36807972 DOI: 10.1093/humrep/dead031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Revised: 01/16/2023] [Indexed: 02/22/2023] Open
Abstract
STUDY QUESTION Is the vertebrate protein Dead end (DND1) a causative factor for human infertility and can novel in vivo assays in zebrafish help in evaluating this? SUMMARY ANSWER Combining patient genetic data with functional in vivo assays in zebrafish reveals a possible role for DND1 in human male fertility. WHAT IS KNOWN ALREADY About 7% of the male population is affected by infertility but linking specific gene variants to the disease is challenging. The function of the DND1 protein was shown to be critical for germ cell development in several model organisms but a reliable and cost-effective method for evaluating the activity of the protein in the context of human male infertility is still missing. STUDY DESIGN, SIZE, DURATION Exome data from 1305 men included in the Male Reproductive Genomics cohort were examined in this study. A total of 1114 of the patients showed severely impaired spermatogenesis but were otherwise healthy. Eighty-five men with intact spermatogenesis were included in the study as controls. PARTICIPANTS/MATERIALS, SETTING, METHODS We screened the human exome data for rare, stop-gain, frameshift, splice site, as well as missense variants in DND1. The results were validated by Sanger sequencing. Immunohistochemical techniques and, when possible, segregation analyses were performed for patients with identified DND1 variants. The amino acid exchange in the human variant was mimicked at the corresponding site of the zebrafish protein. Using different aspects of germline development in live zebrafish embryos as biological assays, we examined the activity level of these DND1 protein variants. MAIN RESULTS AND THE ROLE OF CHANCE In human exome sequencing data, we identified four heterozygous variants in DND1 (three missense and one frameshift variant) in five unrelated patients. The function of all of the variants was examined in the zebrafish and one of those was studied in more depth in this model. We demonstrate the use of zebrafish assays as a rapid and effective biological readout for evaluating the possible impact of multiple gene variants on male fertility. This in vivo approach allowed us to assess the direct impact of the variants on germ cell function in the context of the native germline. Focusing on the DND1 gene, we find that zebrafish germ cells, expressing orthologs of DND1 variants identified in infertile men, failed to arrive correctly at the position where the gonad develops and exhibited defects in cell fate maintenance. Importantly, our analysis facilitated the evaluation of single nucleotide variants, whose impact on protein function is difficult to predict, and allowed us to distinguish variants that do not affect the protein's activity from those that strongly reduce it and could thus potentially be the primary cause for the pathological condition. These aberrations in germline development resemble the testicular phenotype of azoospermic patients. LIMITATIONS, REASONS FOR CAUTION The pipeline we present requires access to zebrafish embryos and to basic imaging equipment. The notion that the activity of the protein in the zebrafish-based assays is relevant for the human homolog is well supported by previous knowledge. Nevertheless, the human protein may differ in some respects from its homologue in zebrafish. Thus, the assay should be considered only one of the parameters used in defining DND1 variants as causative or non-causative for infertility. WIDER IMPLICATIONS OF THE FINDINGS Using DND1 as an example, we have shown that the approach described in this study, relying on bridging between clinical findings and fundamental cell biology, can help to establish links between novel human disease candidate genes and fertility. In particular, the power of the approach we developed is manifested by the fact that it allows the identification of DND1 variants that arose de novo. The strategy presented here can be applied to different genes in other disease contexts. STUDY FUNDING/COMPETING INTEREST(S) This study was funded by the German Research Foundation, Clinical Research Unit, CRU326 'Male Germ Cells'. There are no competing interests. TRIAL REGISTRATION NUMBER N/A.
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Affiliation(s)
- Kim Joana Westerich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, Germany
| | - Solveig Reinecke
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, Germany
| | - Jana Emich
- Institute of Reproductive Genetics, University of Münster, Münster, Germany
| | | | - Birgit Stallmeyer
- Institute of Reproductive Genetics, University of Münster, Münster, Germany
| | - Matthias Meyer
- Evolutionary Genetics Department, Max-Planck-Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Manon S Oud
- Department of Human Genetics, Donders Institute for Brain, Cognition and Behavior, Radboud University Medical Center, Nijmegen, The Netherlands
| | - Daniela Fietz
- Institute of Veterinary Anatomy, Histology and Embryology, Justus Liebig University, Gießen, Germany
| | - Adrian Pilatz
- Clinic for Urology, Pediatric Urology and Andrology, Justus Liebig University, Gießen, Germany
| | - Sabine Kliesch
- Department of Clinical and Surgical Andrology, Centre of Reproductive Medicine and Andrology, University of Münster, Münster, Germany
| | - Michal Reichman-Fried
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, Germany
| | - Tamara Limon
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, Germany
| | - Martin Stehling
- Flow Cytometry Unit, Max-Planck-Institute of Molecular Biomedicine, Münster, Germany
| | - Corinna Friedrich
- Institute of Reproductive Genetics, University of Münster, Münster, Germany
| | - Frank Tüttelmann
- Institute of Reproductive Genetics, University of Münster, Münster, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, Germany
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Truszkowski L, Batur D, Long H, Tarbashevich K, Vos BE, Trappmann B, Raz E. Primordial germ cells adjust their protrusion type while migrating in different tissue contexts in vivo. Development 2023; 150:286614. [PMID: 36515556 PMCID: PMC10110502 DOI: 10.1242/dev.200603] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 11/29/2022] [Indexed: 12/15/2022]
Abstract
In both physiological processes and disease contexts, migrating cells have the ability to adapt to conditions in their environment. As an in vivo model for this process, we use zebrafish primordial germ cells that migrate throughout the developing embryo. When migrating within an ectodermal environment, the germ cells form fewer and smaller blebs when compared with their behavior within mesodermal environment. We find that cortical tension of neighboring cells is a parameter that affects blebbing frequency. Interestingly, the change in blebbing activity is accompanied by the formation of more actin-rich protrusions. These alterations in cell behavior that correlate with changes in RhoA activity could allow the cells to maintain dynamic motility parameters, such as migration speed and track straightness, in different settings. In addition, we find that the polarity of the cells can be affected by stiff structures positioned in their migration path This article has an associated 'The people behind the papers' interview.
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Affiliation(s)
- Lukasz Truszkowski
- Institute of Cell Biology, ZMBE, University of Münster, D-48149 Münster, Germany
| | - Dilek Batur
- Institute of Cell Biology, ZMBE, University of Münster, D-48149 Münster, Germany
| | - Hongyan Long
- Bioactive Materials Laboratory, Max Planck Institute for Molecular Biomedicine, D-48149 Münster, Germany
| | | | - Bart E Vos
- Third Institute of Physics - Biophysics, Georg August University Göttingen, D-37007 Göttingen, Germany
| | - Britta Trappmann
- Bioactive Materials Laboratory, Max Planck Institute for Molecular Biomedicine, D-48149 Münster, Germany
| | - Erez Raz
- Institute of Cell Biology, ZMBE, University of Münster, D-48149 Münster, Germany
- Max Planck Institute for Molecular Biomedicine, D-48149, Münster, Germany
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6
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Labbaf Z, Petratou K, Ermlich L, Backer W, Tarbashevich K, Reichman-Fried M, Luschnig S, Schulte-Merker S, Raz E. A robust and tunable system for targeted cell ablation in developing embryos. Dev Cell 2022; 57:2026-2040.e5. [PMID: 35914525 DOI: 10.1016/j.devcel.2022.07.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Revised: 05/10/2022] [Accepted: 07/07/2022] [Indexed: 11/03/2022]
Abstract
Cell ablation is a key method in the research fields of developmental biology, tissue regeneration, and tissue homeostasis. Eliminating specific cell populations allows for characterizing interactions that control cell differentiation, death, behavior, and spatial organization of cells. Current methodologies for inducing cell death suffer from relatively slow kinetics, making them unsuitable for analyzing rapid events and following primary and immediate consequences of the ablation. To address this, we developed a cell-ablation system that is based on bacterial toxin/anti-toxin proteins and enables rapid and cell-autonomous elimination of specific cell types and organs in zebrafish embryos. A unique feature of this system is that it uses an anti-toxin, which allows for controlling the degree and timing of ablation and the resulting phenotypes. The transgenic zebrafish generated in this work represent a highly efficient tool for cell ablation, and this approach is applicable to other model organisms as demonstrated here for Drosophila.
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Affiliation(s)
- Zahra Labbaf
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster 48149, Germany
| | - Kleio Petratou
- Institute for Cardiovascular Organogenesis and Regeneration, Faculty of Medicine, Münster 48149, Germany
| | - Laura Ermlich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster 48149, Germany
| | - Wilko Backer
- Institute for Integrative Cell Biology and Physiology, University of Münster, Münster 48149, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster 48149, Germany
| | - Michal Reichman-Fried
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster 48149, Germany
| | - Stefan Luschnig
- Institute for Integrative Cell Biology and Physiology, University of Münster, Münster 48149, Germany
| | - Stefan Schulte-Merker
- Institute for Cardiovascular Organogenesis and Regeneration, Faculty of Medicine, Münster 48149, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster 48149, Germany.
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Kummer D, Steinbacher T, Thölmann S, Schwietzer MF, Hartmann C, Horenkamp S, Demuth S, Peddibhotla SS, Brinkmann F, Kemper B, Schnekenburger J, Brandt M, Betz T, Liashkovich I, Kouzel IU, Shahin V, Corvaia N, Rottner K, Tarbashevich K, Raz E, Greune L, Schmidt MA, Gerke V, Ebnet K. A JAM-A-tetraspanin-αvβ5 integrin complex regulates contact inhibition of locomotion. J Biophys Biochem Cytol 2022; 221:213070. [PMID: 35293964 PMCID: PMC8931538 DOI: 10.1083/jcb.202105147] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2021] [Revised: 12/16/2021] [Accepted: 01/21/2022] [Indexed: 12/30/2022] Open
Abstract
Contact inhibition of locomotion (CIL) is a process that regulates cell motility upon collision with other cells. Improper regulation of CIL has been implicated in cancer cell dissemination. Here, we identify the cell adhesion molecule JAM-A as a central regulator of CIL in tumor cells. JAM-A is part of a multimolecular signaling complex in which tetraspanins CD9 and CD81 link JAM-A to αvβ5 integrin. JAM-A binds Csk and inhibits the activity of αvβ5 integrin-associated Src. Loss of JAM-A results in increased activities of downstream effectors of Src, including Erk1/2, Abi1, and paxillin, as well as increased activity of Rac1 at cell-cell contact sites. As a consequence, JAM-A-depleted cells show increased motility, have a higher cell-matrix turnover, and fail to halt migration when colliding with other cells. We also find that proper regulation of CIL depends on αvβ5 integrin engagement. Our findings identify a molecular mechanism that regulates CIL in tumor cells and have implications on tumor cell dissemination.
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Affiliation(s)
- Daniel Kummer
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany,Interdisciplinary Clinical Research Center (IZKF), University of Münster, Münster, Germany
| | - Tim Steinbacher
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Sonja Thölmann
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Mariel Flavia Schwietzer
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Christian Hartmann
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Simone Horenkamp
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Sabrina Demuth
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Swetha S.D. Peddibhotla
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Frauke Brinkmann
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany
| | - Björn Kemper
- Biomedical Technology Center, Medical Faculty, University of Münster, Münster, Germany
| | - Jürgen Schnekenburger
- Biomedical Technology Center, Medical Faculty, University of Münster, Münster, Germany
| | - Matthias Brandt
- Institute-associated Research Group “Mechanics of Cellular Systems”, Institute of Cell Biology, ZMBE, University of Münster, Münster, Germany
| | - Timo Betz
- Institute-associated Research Group “Mechanics of Cellular Systems”, Institute of Cell Biology, ZMBE, University of Münster, Münster, Germany
| | - Ivan Liashkovich
- Institute of Physiology II, University of Münster, Münster, Germany
| | - Ivan U. Kouzel
- Sars International Centre for Marine Molecular Biology University of Bergen Thormøhlensgt, Bergen, Norway
| | - Victor Shahin
- Institute of Physiology II, University of Münster, Münster, Germany
| | - Nathalie Corvaia
- Centre d’Immunologie Pierre Fabre (CIPF), Saint-Julien-en-Genevois, France
| | - Klemens Rottner
- Divison of Molecular Cell Biology, Zoological Institute, Technical University Braunschweig, Braunschweig, Germany,Molecular Cell Biology Group, Department of Cell Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany
| | | | - Erez Raz
- Institute of Cell Biology, ZMBE, University of Münster, Münster, Germany,Cells-in-Motion Cluster of Excellence (EXC 1003—CiM), University of Münster, 48419 Münster, Germany
| | - Lilo Greune
- Institute of Infectiology, ZMBE, University of Münster, Münster, Germany
| | | | - Volker Gerke
- Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany,Cells-in-Motion Cluster of Excellence (EXC 1003—CiM), University of Münster, 48419 Münster, Germany
| | - Klaus Ebnet
- Institute-associated Research Group “Cell Adhesion and Cell Polarity”, Münster, Germany,Institute of Medical Biochemistry, ZMBE, University of Münster, Münster, Germany,Interdisciplinary Clinical Research Center (IZKF), University of Münster, Münster, Germany,Cells-in-Motion Cluster of Excellence (EXC 1003—CiM), University of Münster, 48419 Münster, Germany
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8
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Marzano M, Herzmann S, Elsbroek L, Sanal N, Tarbashevich K, Raz E, Krahn MP, Rumpf S. AMPK adapts metabolism to developmental energy requirement during dendrite pruning in Drosophila. Cell Rep 2021; 37:110024. [PMID: 34788610 DOI: 10.1016/j.celrep.2021.110024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 07/30/2021] [Accepted: 10/28/2021] [Indexed: 10/19/2022] Open
Abstract
To reshape neuronal connectivity in adult stages, Drosophila sensory neurons prune their dendrites during metamorphosis using a genetic degeneration program that is induced by the steroid hormone ecdysone. Metamorphosis is a nonfeeding stage that imposes metabolic constraints on development. We find that AMP-activated protein kinase (AMPK), a regulator of energy homeostasis, is cell-autonomously required for dendrite pruning. AMPK is activated by ecdysone and promotes oxidative phosphorylation and pyruvate usage, likely to enable neurons to use noncarbohydrate metabolites such as amino acids for energy production. Loss of AMPK or mitochondrial deficiency causes specific defects in pruning factor translation and the ubiquitin-proteasome system. Our findings distinguish pruning from pathological neurite degeneration, which is often induced by defects in energy production, and highlight how metabolism is adapted to fit energy-costly developmental transitions.
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Affiliation(s)
- Marco Marzano
- Institute for Neurobiology, University of Münster, Badestrasse 9, 48149 Münster, Germany
| | - Svende Herzmann
- Institute for Neurobiology, University of Münster, Badestrasse 9, 48149 Münster, Germany
| | - Leonardo Elsbroek
- Institute for Neurobiology, University of Münster, Badestrasse 9, 48149 Münster, Germany
| | - Neeraja Sanal
- Institute for Neurobiology, University of Münster, Badestrasse 9, 48149 Münster, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
| | - Michael P Krahn
- Department of Medical Cell Biology, Medical Clinic D, University Hospital of Münster, Münster, Germany
| | - Sebastian Rumpf
- Institute for Neurobiology, University of Münster, Badestrasse 9, 48149 Münster, Germany.
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9
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Grimaldi C, Schumacher I, Boquet-Pujadas A, Tarbashevich K, Vos BE, Bandemer J, Schick J, Aalto A, Olivo-Marin JC, Betz T, Raz E. E-cadherin focuses protrusion formation at the front of migrating cells by impeding actin flow. Nat Commun 2020; 11:5397. [PMID: 33106478 PMCID: PMC7588466 DOI: 10.1038/s41467-020-19114-z] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Accepted: 09/25/2020] [Indexed: 12/11/2022] Open
Abstract
The migration of many cell types relies on the formation of actomyosin-dependent protrusions called blebs, but the mechanisms responsible for focusing this kind of protrusive activity to the cell front are largely unknown. Here, we employ zebrafish primordial germ cells (PGCs) as a model to study the role of cell-cell adhesion in bleb-driven single-cell migration in vivo. Utilizing a range of genetic, reverse genetic and mathematical tools, we define a previously unknown role for E-cadherin in confining bleb-type protrusions to the leading edge of the cell. We show that E-cadherin-mediated frictional forces impede the backwards flow of actomyosin-rich structures that define the domain where protrusions are preferentially generated. In this way, E-cadherin confines the bleb-forming region to a restricted area at the cell front and reinforces the front-rear axis of migrating cells. Accordingly, when E-cadherin activity is reduced, the bleb-forming area expands, thus compromising the directional persistence of the cells. The arrival of migratory cells at their targets relies on following precise routes within tissues. Here the authors demonstrate that the cell adhesion molecule E-cadherin can control the path of cell migration by confining the site where bleb-type protrusions form within the cell front.
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Affiliation(s)
- Cecilia Grimaldi
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany
| | - Isabel Schumacher
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany
| | - Aleix Boquet-Pujadas
- Institut Pasteur, Bioimage Analysis Unit, 75105, Paris, France.,CNRS UMR 3691, 75105, Paris, France.,Sorbonne Université, 75005, Paris, France
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany
| | - Bart Eduard Vos
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany
| | - Jan Bandemer
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany
| | - Jan Schick
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany
| | - Anne Aalto
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany
| | | | - Timo Betz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany.,Institute of Physics - Biophysics, Georg August Universität, Friedrich-Hund-Platz 1, 37077, Göttingen, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149, Münster, Germany.
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10
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Skvortsova K, Tarbashevich K, Stehling M, Lister R, Irimia M, Raz E, Bogdanovic O. Retention of paternal DNA methylome in the developing zebrafish germline. Nat Commun 2019; 10:3054. [PMID: 31296860 PMCID: PMC6624265 DOI: 10.1038/s41467-019-10895-6] [Citation(s) in RCA: 71] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2018] [Accepted: 05/31/2019] [Indexed: 01/08/2023] Open
Abstract
Two waves of DNA methylation reprogramming occur during mammalian embryogenesis; during preimplantation development and during primordial germ cell (PGC) formation. However, it is currently unclear how evolutionarily conserved these processes are. Here we characterise the DNA methylomes of zebrafish PGCs at four developmental stages and identify retention of paternal epigenetic memory, in stark contrast to the findings in mammals. Gene expression profiling of zebrafish PGCs at the same developmental stages revealed that the embryonic germline is defined by a small number of markers that display strong developmental stage-specificity and that are independent of DNA methylation-mediated regulation. We identified promoters that are specifically targeted by DNA methylation in somatic and germline tissues during vertebrate embryogenesis and that are frequently misregulated in human cancers. Together, these detailed methylome and transcriptome maps of the zebrafish germline provide insight into vertebrate DNA methylation reprogramming and enhance our understanding of the relationships between germline fate acquisition and oncogenesis.
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Affiliation(s)
- Ksenia Skvortsova
- Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, NSW, 2010, Australia
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, 48149, Germany
| | - Martin Stehling
- Flow Cytometry Unit, Max-Planck-Institute for Molecular Biomedicine, Roentgenstraße 20, 48149, Münster, Germany
| | - Ryan Lister
- ARC CoE Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, WA, 6009, Australia
- Molecular Medicine Division, Harry Perkins Institute of Medical Research, Perth, WA, 6009, Australia
| | - Manuel Irimia
- Centre for Genomic Regulation, The Barcelona Institute for Science and Technology, Barcelona, 08003, Spain
- Universitat Pompeu Fabra (UPF), Barcelona, 08002, Spain
- ICREA, Barcelona, 08010, Spain
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Münster, 48149, Germany
| | - Ozren Bogdanovic
- Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, NSW, 2010, Australia.
- School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, 2010, Australia.
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11
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Pfeiffer J, Tarbashevich K, Bandemer J, Palm T, Raz E. Rapid progression through the cell cycle ensures efficient migration of primordial germ cells - The role of Hsp90. Dev Biol 2018; 436:84-93. [PMID: 29477339 DOI: 10.1016/j.ydbio.2018.02.014] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2017] [Revised: 11/30/2017] [Accepted: 02/21/2018] [Indexed: 01/21/2023]
Abstract
Zebrafish primordial germ cells (PGCs) constitute a useful in vivo model to study cell migration and to elucidate the role of specific proteins in this process. Here we report on the role of the heat shock protein Hsp90aa1.2, a protein whose RNA level is elevated in the PGCs during their migration. Reducing Hsp90aa1.2 activity slows down the progression through the cell cycle and leads to defects in the control over the MTOC number in the migrating cells. These defects result in a slower migration rate and compromise the arrival of PGCs at their target, the region where the gonad develops. Our results emphasize the importance of ensuring rapid progression through the cell cycle during single-cell migration and highlight the role of heat shock proteins in the process.
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Affiliation(s)
- Jana Pfeiffer
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Von-Esmarch-Str. 56, 48149 Münster, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Von-Esmarch-Str. 56, 48149 Münster, Germany
| | - Jan Bandemer
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Von-Esmarch-Str. 56, 48149 Münster, Germany
| | - Thomas Palm
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Von-Esmarch-Str. 56, 48149 Münster, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, Von-Esmarch-Str. 56, 48149 Münster, Germany.
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12
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Cao J, Ehling M, März S, Seebach J, Tarbashevich K, Sixta T, Pitulescu ME, Werner AC, Flach B, Montanez E, Raz E, Adams RH, Schnittler H. Polarized actin and VE-cadherin dynamics regulate junctional remodelling and cell migration during sprouting angiogenesis. Nat Commun 2017; 8:2210. [PMID: 29263363 PMCID: PMC5738342 DOI: 10.1038/s41467-017-02373-8] [Citation(s) in RCA: 104] [Impact Index Per Article: 14.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2016] [Accepted: 11/24/2017] [Indexed: 02/07/2023] Open
Abstract
VEGFR-2/Notch signalling regulates angiogenesis in part by driving the remodelling of endothelial cell junctions and by inducing cell migration. Here, we show that VEGF-induced polarized cell elongation increases cell perimeter and decreases the relative VE-cadherin concentration at junctions, triggering polarized formation of actin-driven junction-associated intermittent lamellipodia (JAIL) under control of the WASP/WAVE/ARP2/3 complex. JAIL allow formation of new VE-cadherin adhesion sites that are critical for cell migration and monolayer integrity. Whereas at the leading edge of the cell, large JAIL drive cell migration with supportive contraction, lateral junctions show small JAIL that allow relative cell movement. VEGFR-2 activation initiates cell elongation through dephosphorylation of junctional myosin light chain II, which leads to a local loss of tension to induce JAIL-mediated junctional remodelling. These events require both microtubules and polarized Rac activity. Together, we propose a model where polarized JAIL formation drives directed cell migration and junctional remodelling during sprouting angiogenesis. The formation of new blood vessels requires both polarized cell migration and coordinated control of endothelial cell contacts. Here, Cao and colleagues describe at the sub-cellular level the cytoskeletal and cell junction dynamics regulating these processes upon VEGF-induced cell elongation.
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Affiliation(s)
- Jiahui Cao
- Institute of Anatomy and Vascular Biology, Westfälische Wilhelms University of Münster, Faculty of Medicine, D-48149, Münster, Germany
| | - Manuel Ehling
- Max Planck Institute for Molecular Biomedicine and Westfälische Wilhelms University of Münster, Faculty of Medicine, D-48149, Münster, Germany
| | - Sigrid März
- Institute of Anatomy and Vascular Biology, Westfälische Wilhelms University of Münster, Faculty of Medicine, D-48149, Münster, Germany
| | - Jochen Seebach
- Institute of Anatomy and Vascular Biology, Westfälische Wilhelms University of Münster, Faculty of Medicine, D-48149, Münster, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, D-48149, Münster, Germany
| | - Tomas Sixta
- Department of Cybernetics, Czech Technical University, 16627, Prague 6, Czech Republic
| | - Mara E Pitulescu
- Max Planck Institute for Molecular Biomedicine and Westfälische Wilhelms University of Münster, Faculty of Medicine, D-48149, Münster, Germany
| | - Ann-Cathrin Werner
- Walter-Brendel-Centre of Experimental Medicine, University Hospital, LMU Munich, D-81377 Munich, Germany
| | - Boris Flach
- Department of Cybernetics, Czech Technical University, 16627, Prague 6, Czech Republic
| | - Eloi Montanez
- Walter-Brendel-Centre of Experimental Medicine, University Hospital, LMU Munich, D-81377 Munich, Germany
| | - Erez Raz
- Institute of Cell Biology, Center for Molecular Biology of Inflammation, D-48149, Münster, Germany
| | - Ralf H Adams
- Max Planck Institute for Molecular Biomedicine and Westfälische Wilhelms University of Münster, Faculty of Medicine, D-48149, Münster, Germany
| | - Hans Schnittler
- Institute of Anatomy and Vascular Biology, Westfälische Wilhelms University of Münster, Faculty of Medicine, D-48149, Münster, Germany.
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13
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Goudarzi M, Tarbashevich K, Mildner K, Begemann I, Garcia J, Paksa A, Reichman-Fried M, Mahabaleshwar H, Blaser H, Hartwig J, Zeuschner D, Galic M, Bagnat M, Betz T, Raz E. Bleb Expansion in Migrating Cells Depends on Supply of Membrane from Cell Surface Invaginations. Dev Cell 2017; 43:577-587.e5. [PMID: 29173819 PMCID: PMC5939956 DOI: 10.1016/j.devcel.2017.10.030] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2017] [Revised: 09/27/2017] [Accepted: 10/26/2017] [Indexed: 01/14/2023]
Abstract
Cell migration is essential for morphogenesis, organ formation, and homeostasis, with relevance for clinical conditions. The migration of primordial germ cells (PGCs) is a useful model for studying this process in the context of the developing embryo. Zebrafish PGC migration depends on the formation of cellular protrusions in form of blebs, a type of protrusion found in various cell types. Here we report on the mechanisms allowing the inflation of the membrane during bleb formation. We show that the rapid expansion of the protrusion depends on membrane invaginations that are localized preferentially at the cell front. The formation of these invaginations requires the function of Cdc42, and their unfolding allows bleb inflation and dynamic cell-shape changes performed by migrating cells. Inhibiting the formation and release of the invaginations strongly interfered with bleb formation, cell motility, and the ability of the cells to reach their target.
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Affiliation(s)
- Mohammad Goudarzi
- Institute for Cell Biology, ZMBE, Von-Esmarch-Strasse 56, 48149 Münster, Germany
| | | | - Karina Mildner
- Electron Microscopy Unit, Max Planck Institute for Molecular Biomedicine, Röntgenstrasse 20, 48149 Münster, Germany
| | - Isabell Begemann
- Workgroup Nanoforces in Cells, Institute of Medical Physics und Biophysics, DFG Cluster of Excellence 'Cells in Motion' (EXC 1003), Robert-Koch-Strasse 31, 48149 Münster, Germany
| | - Jamie Garcia
- Department of Cell Biology, Duke University, 333B Nanaline Duke Building, Box 3709, Durham, NC 27710, USA
| | - Azadeh Paksa
- Institute for Cell Biology, ZMBE, Von-Esmarch-Strasse 56, 48149 Münster, Germany
| | | | - Harsha Mahabaleshwar
- Institute for Cell Biology, ZMBE, Von-Esmarch-Strasse 56, 48149 Münster, Germany
| | - Heiko Blaser
- Germ Cell Development, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37070 Göttingen, Germany
| | - Johannes Hartwig
- Institute for Cell Biology, ZMBE, Von-Esmarch-Strasse 56, 48149 Münster, Germany
| | - Dagmar Zeuschner
- Electron Microscopy Unit, Max Planck Institute for Molecular Biomedicine, Röntgenstrasse 20, 48149 Münster, Germany
| | - Milos Galic
- Workgroup Nanoforces in Cells, Institute of Medical Physics und Biophysics, DFG Cluster of Excellence 'Cells in Motion' (EXC 1003), Robert-Koch-Strasse 31, 48149 Münster, Germany
| | - Michel Bagnat
- Department of Cell Biology, Duke University, 333B Nanaline Duke Building, Box 3709, Durham, NC 27710, USA
| | - Timo Betz
- Institute for Cell Biology, ZMBE, Von-Esmarch-Strasse 56, 48149 Münster, Germany
| | - Erez Raz
- Institute for Cell Biology, ZMBE, Von-Esmarch-Strasse 56, 48149 Münster, Germany.
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14
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Otten ABC, Theunissen TEJ, Derhaag JG, Lambrichs EH, Boesten IBW, Winandy M, van Montfoort APA, Tarbashevich K, Raz E, Gerards M, Vanoevelen JM, van den Bosch BJC, Muller M, Smeets HJM. Differences in Strength and Timing of the mtDNA Bottleneck between Zebrafish Germline and Non-germline Cells. Cell Rep 2016; 16:622-30. [PMID: 27373161 DOI: 10.1016/j.celrep.2016.06.023] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2015] [Revised: 04/15/2016] [Accepted: 06/02/2016] [Indexed: 10/21/2022] Open
Abstract
We studied the mtDNA bottleneck in zebrafish to elucidate size, timing, and variation in germline and non-germline cells. Mature zebrafish oocytes contain, on average, 19.0 × 10(6) mtDNA molecules with high variation between oocytes. During embryogenesis, the mtDNA copy number decreases to ∼170 mtDNA molecules per primordial germ cell (PGC), a number similar to that in mammals, and to ∼50 per non-PGC. These occur at the same developmental stage, implying considerable variation in mtDNA copy number in (non-)PGCs of the same female, dictated by variation in the mature oocyte. The presence of oocytes with low mtDNA numbers, if similar in humans, could explain how (de novo) mutations can reach high mutation loads within a single generation. High mtDNA copy numbers in mature oocytes are established by mtDNA replication during oocyte development. Bottleneck differences between germline and non-germline cells, due to early differentiation of PGCs, may account for different distribution patterns of familial mutations.
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Affiliation(s)
- Auke B C Otten
- Department of Genetics and Cell Biology, Clinical Genomics Unit, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Tom E J Theunissen
- Department of Genetics and Cell Biology, Clinical Genomics Unit, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Josien G Derhaag
- Department of Obstetrics and Gynaecology, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Ellen H Lambrichs
- Department of Genetics and Cell Biology, Clinical Genomics Unit, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Iris B W Boesten
- Department of Genetics and Cell Biology, Clinical Genomics Unit, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Marie Winandy
- Laboratory of Organogenesis and Regeneration, GIGA-Research, Univérsité de Liège, 4000 Liège, Belgium
| | - Aafke P A van Montfoort
- Department of Obstetrics and Gynaecology, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Katsiaryna Tarbashevich
- Institute for Cell Biology, Centre for Molecular Biology of Inflammation, Münster University, 48149 Münster, Germany
| | - Erez Raz
- Institute for Cell Biology, Centre for Molecular Biology of Inflammation, Münster University, 48149 Münster, Germany
| | - Mike Gerards
- Maastricht Centre for Systems Biology (MaCSBio), Maastricht University Medical Centre, 6200MD, the Netherlands
| | - Jo M Vanoevelen
- Department of Genetics and Cell Biology, Clinical Genomics Unit, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Bianca J C van den Bosch
- Department of Genetics and Cell Biology, Clinical Genomics Unit, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands
| | - Marc Muller
- Laboratory of Organogenesis and Regeneration, GIGA-Research, Univérsité de Liège, 4000 Liège, Belgium
| | - Hubert J M Smeets
- Department of Genetics and Cell Biology, Clinical Genomics Unit, School for Oncology and Developmental Biology (GROW), Maastricht University Medical Centre, 6200MD Maastricht, the Netherlands; Maastricht Centre for Systems Biology (MaCSBio), Maastricht University Medical Centre, 6200MD, the Netherlands.
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15
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Paksa A, Bandemer J, Hoeckendorf B, Razin N, Tarbashevich K, Minina S, Meyen D, Biundo A, Leidel SA, Peyrieras N, Gov NS, Keller PJ, Raz E. Repulsive cues combined with physical barriers and cell-cell adhesion determine progenitor cell positioning during organogenesis. Nat Commun 2016; 7:11288. [PMID: 27088892 PMCID: PMC4837475 DOI: 10.1038/ncomms11288] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2015] [Accepted: 03/09/2016] [Indexed: 01/15/2023] Open
Abstract
The precise positioning of organ progenitor cells constitutes an essential, yet poorly understood step during organogenesis. Using primordial germ cells that participate in gonad formation, we present the developmental mechanisms maintaining a motile progenitor cell population at the site where the organ develops. Employing high-resolution live-cell microscopy, we find that repulsive cues coupled with physical barriers confine the cells to the correct bilateral positions. This analysis revealed that cell polarity changes on interaction with the physical barrier and that the establishment of compact clusters involves increased cell–cell interaction time. Using particle-based simulations, we demonstrate the role of reflecting barriers, from which cells turn away on contact, and the importance of proper cell–cell adhesion level for maintaining the tight cell clusters and their correct positioning at the target region. The combination of these developmental and cellular mechanisms prevents organ fusion, controls organ positioning and is thus critical for its proper function. The precise positioning of organ progenitor cells is essential for organ development and function. Here the authors use live imaging and mathematical modelling to show that the confinement of a motile progenitor cell population results from coupled physical barriers and cell-cell interactions.
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Affiliation(s)
- Azadeh Paksa
- Institute for Cell Biology, ZMBE, Von-Esmarch-Street 56, 48149 Muenster, Germany
| | - Jan Bandemer
- Institute for Cell Biology, ZMBE, Von-Esmarch-Street 56, 48149 Muenster, Germany
| | | | - Nitzan Razin
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | | | - Sofia Minina
- Germ Cell Development, Max-Planck Institute of Biophysical Chemistry, Am Fassberg 11, 37070 Göttingen, Germany
| | - Dana Meyen
- Institute for Cell Biology, ZMBE, Von-Esmarch-Street 56, 48149 Muenster, Germany
| | - Antonio Biundo
- Max Planck Research Group for RNA Biology, Max Planck Institute for Molecular Biomedicine, Von-Esmarch-Strasse 54, 48149 Muenster, Germany
| | - Sebastian A Leidel
- Max Planck Research Group for RNA Biology, Max Planck Institute for Molecular Biomedicine, Von-Esmarch-Strasse 54, 48149 Muenster, Germany
| | - Nadine Peyrieras
- USR3695 BioEmergences, CNRS, Université Paris-Saclay, Avenue de la Terrasse, 91190 Gif-sur-Yvette, France
| | - Nir S Gov
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | | | - Erez Raz
- Institute for Cell Biology, ZMBE, Von-Esmarch-Street 56, 48149 Muenster, Germany
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16
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Tulotta C, Stefanescu C, Beletkaia E, Bussmann J, Tarbashevich K, Schmidt T, Snaar-Jagalska BE. Inhibition of signaling between human CXCR4 and zebrafish ligands by the small molecule IT1t impairs the formation of triple-negative breast cancer early metastases in a zebrafish xenograft model. Dis Model Mech 2016; 9:141-53. [PMID: 26744352 PMCID: PMC4770151 DOI: 10.1242/dmm.023275] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2015] [Accepted: 12/25/2015] [Indexed: 12/15/2022] Open
Abstract
Triple-negative breast cancer (TNBC) is a highly aggressive and recurrent type of breast carcinoma that is associated with poor patient prognosis. Because of the limited efficacy of current treatments, new therapeutic strategies need to be developed. The CXCR4-CXCL12 chemokine signaling axis guides cell migration in physiological and pathological processes, including breast cancer metastasis. Although targeted therapies to inhibit the CXCR4-CXCL12 axis are under clinical experimentation, still no effective therapeutic approaches have been established to block CXCR4 in TNBC. To unravel the role of the CXCR4-CXCL12 axis in the formation of TNBC early metastases, we used the zebrafish xenograft model. Importantly, we demonstrate that cross-communication between the zebrafish and human ligands and receptors takes place and human tumor cells expressing CXCR4 initiate early metastatic events by sensing zebrafish cognate ligands at the metastatic site. Taking advantage of the conserved intercommunication between human tumor cells and the zebrafish host, we blocked TNBC early metastatic events by chemical and genetic inhibition of CXCR4 signaling. We used IT1t, a potent CXCR4 antagonist, and show for the first time its promising anti-tumor effects. In conclusion, we confirm the validity of the zebrafish as a xenotransplantation model and propose a pharmacological approach to target CXCR4 in TNBC. Summary: CXCR4-expressing human tumor cells respond to zebrafish cognate ligands and initiate metastatic events in a zebrafish xenograft model. The CXCR4 antagonist IT1t has promising tumor inhibitory effects.
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Affiliation(s)
- Claudia Tulotta
- Institute of Biology, Animal Sciences and Health, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | - Cristina Stefanescu
- Institute of Biology, Animal Sciences and Health, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | - Elena Beletkaia
- Physics of Life Processes, Kamerligh Onnes-Huygens Laboratory, Leiden University, Niels Bohrweg 2, Leiden 2333 CA, The Netherlands
| | - Jeroen Bussmann
- Institute of Biology, Animal Sciences and Health, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands Leiden Institute of Chemistry, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | | | - Thomas Schmidt
- Physics of Life Processes, Kamerligh Onnes-Huygens Laboratory, Leiden University, Niels Bohrweg 2, Leiden 2333 CA, The Netherlands
| | - B Ewa Snaar-Jagalska
- Institute of Biology, Animal Sciences and Health, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
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17
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Meyen D, Tarbashevich K, Banisch TU, Wittwer C, Reichman-Fried M, Maugis B, Grimaldi C, Messerschmidt EM, Raz E. Dynamic filopodia are required for chemokine-dependent intracellular polarization during guided cell migration in vivo. eLife 2015; 4. [PMID: 25875301 PMCID: PMC4397908 DOI: 10.7554/elife.05279] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2014] [Accepted: 03/23/2015] [Indexed: 01/08/2023] Open
Abstract
Cell migration and polarization is controlled by signals in the environment. Migrating cells typically form filopodia that extend from the cell surface, but the precise function of these structures in cell polarization and guided migration is poorly understood. Using the in vivo model of zebrafish primordial germ cells for studying chemokine-directed single cell migration, we show that filopodia distribution and their dynamics are dictated by the gradient of the chemokine Cxcl12a. By specifically interfering with filopodia formation, we demonstrate for the first time that these protrusions play an important role in cell polarization by Cxcl12a, as manifested by elevation of intracellular pH and Rac1 activity at the cell front. The establishment of this polarity is at the basis of effective cell migration towards the target. Together, we show that filopodia allow the interpretation of the chemotactic gradient in vivo by directing single-cell polarization in response to the guidance cue. DOI:http://dx.doi.org/10.7554/eLife.05279.001 Some of the cells in an animal embryo have to migrate long distances to reach their final positions; that is to say, to reach the locations where they will participate in the formation of tissues and organs. The migration of cells is also important throughout the entire lifespan of an animal. White blood cells, for example, must be able to move within tissues to search for and fight infections as well as to detect and remove abnormal cells. The front end of a migrating cell typically protrudes. The back of the cell is then pulled and detaches, which allows the whole cell to move forward. Migrating cells generate thin finger-like projections known as filopodia that have been suggested to help the cell sense their external environments and follow chemical cues. It is not clear what happens to a migrating cell in a living organism if the formation of its filopodia is impaired, or even how filipodia help the normal migration of cells in animals. To define how filopodia help to guide migrating cells in an animal, Meyen et al. analyzed the migration of cells called ‘primordial germ cells’ (or PGCs) in zebrafish. These cells form very early on in development of a zebrafish embryo at a position that is far away from their final location (in the testes or ovaries where they will go on to form sperm or egg cells respectively). Meyen et al. revealed that cells that are exposed to the guidance cue (a protein called a chemokine) form more filopodia at their front compared to their rear. The filopodia formed at the cell front also extend and retract more frequently. Meyen et al. further observed that the specific chemokine that guides the cells can bind to the filopodia and enter the cell. This leads to a signal inside the cell that tells the cell to move in the direction where more of the chemokine is found. Indeed, altering the distribution and number of filopodia around the cell's edge decreases the ability of the primordial germ cells to reach their targets. Together, this work shows that the filopodia at the front end of cells are required for sensing the chemokines that guide cell movement. Further work is required to understand the mechanism that determines the distribution of filopodia on the surface of migrating cells, and the role of chemokines in the process. Moreover, this work may also be relevant for understanding the migration of cancer cells, because several types of cancer can invade new tissues by following directional cues including chemokines. DOI:http://dx.doi.org/10.7554/eLife.05279.002
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Affiliation(s)
- Dana Meyen
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Katsiaryna Tarbashevich
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Torsten U Banisch
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Carolina Wittwer
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Michal Reichman-Fried
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Benoît Maugis
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Cecilia Grimaldi
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Esther-Maria Messerschmidt
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
| | - Erez Raz
- Institute for Cell Biology, Center for Molecular Biology of Inflammation, Münster University, Münster, Germany
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Claussen M, Tarbashevich K, Pieler T. Functional dissection of the RNA signal sequence responsible for vegetal localization ofXGrip2.1mRNA in Xenopus oocytes. RNA Biol 2014; 8:873-82. [DOI: 10.4161/rna.8.5.16028] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
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Palm T, Hemmer K, Winter J, Fricke IB, Tarbashevich K, Sadeghi Shakib F, Rudolph IM, Hillje AL, De Luca P, Bahnassawy L, Madel R, Viel T, De Siervi A, Jacobs AH, Diederichs S, Schwamborn JC. A systemic transcriptome analysis reveals the regulation of neural stem cell maintenance by an E2F1-miRNA feedback loop. Nucleic Acids Res 2013; 41:3699-712. [PMID: 23396440 PMCID: PMC3616707 DOI: 10.1093/nar/gkt070] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Stem cell fate decisions are controlled by a molecular network in which transcription factors and miRNAs are of key importance. To systemically investigate their impact on neural stem cell (NSC) maintenance and neuronal commitment, we performed a high-throughput mRNA and miRNA profiling and isolated functional interaction networks of involved mechanisms. Thereby, we identified an E2F1–miRNA feedback loop as important regulator of NSC fate decisions. Although E2F1 supports NSC proliferation and represses transcription of miRNAs from the miR-17∼92 and miR-106a∼363 clusters, these miRNAs are transiently up-regulated at early stages of neuronal differentiation. In these early committed cells, increased miRNAs expression levels directly repress E2F1 mRNA levels and inhibit cellular proliferation. In mice, we demonstrated that these miRNAs are expressed in the neurogenic areas and that E2F1 inhibition represses NSC proliferation. The here presented data suggest a novel interaction mechanism between E2F1 and miR-17∼92 / miR-106a∼363 miRNAs in controlling NSC proliferation and neuronal differentiation.
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Affiliation(s)
- Thomas Palm
- Westfälische Wilhelms-Universität Münster, ZMBE, Institute of Cell Biology, Stem Cell Biology and Regeneration Group, 48149 Münster, Germany
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Stückemann T, Wegleiter T, Stefan E, Nägele O, Tarbashevich K, Böck G, Raz E, Aanstad P. Zebrafish Cxcr4a determines the proliferative response to Hedgehog signalling. Development 2012; 139:2711-20. [PMID: 22782722 DOI: 10.1242/dev.074930] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The Hedgehog (Hh) pathway plays dual roles in proliferation and patterning during embryonic development, but the mechanism(s) that distinguish the mitogenic and patterning activities of Hh signalling are not fully understood. An additional level of complexity is provided by the observation that Hh signalling can both promote and inhibit cell proliferation. One model to account for this apparent paradox is that Hh signalling primarily regulates cell cycle kinetics, such that activation of Hh signalling promotes fast cycling and an earlier cell cycle exit. Here we report that activation of Hh signalling promotes endodermal cell proliferation but inhibits proliferation in neighbouring non-endodermal cells, suggesting that the cell cycle kinetics model is insufficient to account for the opposing proliferative responses to Hh signalling. We show that expression of the chemokine receptor Cxcr4a is a critical parameter that determines the proliferative response to Hh signalling, and that loss of Cxcr4a function attenuates the transcription of cell cycle regulator targets of Hh signalling without affecting general transcriptional targets. We show that Cxcr4a inhibits PKA activity independently of Hh signalling, and propose that Cxcr4a enhances Hh-dependent proliferation by promoting the activity of Gli1. Our results indicate that Cxcr4a is required for Hh-dependent cell proliferation but not for Hh-dependent patterning, and suggest that the parallel activation of Cxcr4a is required to modulate the Hh pathway to distinguish between patterning and proliferation.
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Affiliation(s)
- Tom Stückemann
- Institute of Molecular Biology, University of Innsbruck, Technikerstrasse 25, Innsbruck, Austria
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Mahabaleshwar H, Tarbashevich K, Nowak M, Brand M, Raz E. β-arrestin control of late endosomal sorting facilitates decoy receptor function and chemokine gradient formation. Development 2012; 139:2897-902. [PMID: 22791893 DOI: 10.1242/dev.080408] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
A crucial regulator of Cxcl12 is the decoy receptor Cxcr7, which controls the level of the chemokine in the tissue. The molecular mechanisms that enable Cxcr7 to function as an efficient molecular sink are not known. Using zebrafish primordial germ cells as a model, we identify a novel role for β-arrestins in controlling the intracellular trafficking of Cxcr7. β-arrestins facilitate the recycling of Cxcr7 from late endosomal compartments back to the plasma membrane, whereas the internalized ligand undergoes lysosomal degradation. β-arrestins thus function in regulating chemokine gradient formation, allowing responding cells to discriminate between alternative migration targets in vivo.
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Affiliation(s)
- Harsha Mahabaleshwar
- Institute of Cell Biology, ZMBE, University of Münster, Von-Esmarch-Str. 56, 48149 Münster, Germany
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Goudarzi M, Banisch T, Mobin M, Maghelli N, Tarbashevich K, Strate I, van den Berg J, Blaser H, Bandemer S, Paluch E, Bakkers J, Tolić-Nørrelykke I, Raz E. Identification and Regulation of a Molecular Module for Bleb-Based Cell Motility. Dev Cell 2012; 23:210-8. [DOI: 10.1016/j.devcel.2012.05.007] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2011] [Revised: 04/21/2012] [Accepted: 05/10/2012] [Indexed: 10/28/2022]
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Boldajipour B, Doitsidou M, Tarbashevich K, Laguri C, Yu SR, Ries J, Dumstrei K, Thelen S, Dörries J, Messerschmidt EM, Thelen M, Schwille P, Brand M, Lortat-Jacob H, Raz E. Cxcl12 evolution – subfunctionalization of a ligand through altered interaction with the chemokine receptor. Development 2011; 138:2909-14. [DOI: 10.1242/dev.068379] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
The active migration of primordial germ cells (PGCs) from their site of specification towards their target is a valuable model for investigating directed cell migration within the complex environment of the developing embryo. In several vertebrates, PGC migration is guided by Cxcl12, a member of the chemokine superfamily. Interestingly, two distinct Cxcl12 paralogs are expressed in zebrafish embryos and contribute to the chemotattractive landscape. Although this offers versatility in the use of chemokine signals, it also requires a mechanism through which migrating cells prioritize the relevant cues that they encounter. Here, we show that PGCs respond preferentially to one of the paralogs and define the molecular basis for this biased behavior. We find that a single amino acid exchange switches the relative affinity of the Cxcl12 ligands for one of the duplicated Cxcr4 receptors, thereby determining the functional specialization of each chemokine that elicits a distinct function in a distinct process. This scenario represents an example of protein subfunctionalization – the specialization of two gene copies to perform complementary functions following gene duplication – which in this case is based on receptor-ligand interaction. Such specialization increases the complexity and flexibility of chemokine signaling in controlling concurrent developmental processes.
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Affiliation(s)
- Bijan Boldajipour
- Institute of Cell Biology, Center of Molecular Biology of Inflammation, University of Münster, von-Esmarch-Str. 56, 48149 Münster, Germany
- Max-Planck Institute of Biophysical Chemistry, Am Fassberg 11, 37070 Göttingen, Germany
| | - Maria Doitsidou
- Max-Planck Institute of Biophysical Chemistry, Am Fassberg 11, 37070 Göttingen, Germany
| | - Katsiaryna Tarbashevich
- Institute of Cell Biology, Center of Molecular Biology of Inflammation, University of Münster, von-Esmarch-Str. 56, 48149 Münster, Germany
| | - Cedric Laguri
- IBS, Institut de Biologie Structurale, UMR 5075 CNRS CEA UJF, 41 Rue Horowitz, F-38027 Grenoble, France
| | - Shuizi Rachel Yu
- Biotechnology Center, and Center for Regenerative Therapies, TU Dresden, Tatzberg 47-49, 01307 Dresden, Germany
| | - Jonas Ries
- Biophysics, Biotechnology Center, TU Dresden, Tatzberg 47-49, 01307 Dresden, Germany
| | - Karin Dumstrei
- Max-Planck Institute of Biophysical Chemistry, Am Fassberg 11, 37070 Göttingen, Germany
| | - Sylvia Thelen
- Institute for Research in Biomedicine, via Vela 6, CH-6500 Bellinzona, Switzerland
| | - Julia Dörries
- Max-Planck Institute of Biophysical Chemistry, Am Fassberg 11, 37070 Göttingen, Germany
| | - Esther-Maria Messerschmidt
- Institute of Cell Biology, Center of Molecular Biology of Inflammation, University of Münster, von-Esmarch-Str. 56, 48149 Münster, Germany
| | - Marcus Thelen
- Institute for Research in Biomedicine, via Vela 6, CH-6500 Bellinzona, Switzerland
| | - Petra Schwille
- Biophysics, Biotechnology Center, TU Dresden, Tatzberg 47-49, 01307 Dresden, Germany
| | - Michael Brand
- Biotechnology Center, and Center for Regenerative Therapies, TU Dresden, Tatzberg 47-49, 01307 Dresden, Germany
| | - Hugues Lortat-Jacob
- IBS, Institut de Biologie Structurale, UMR 5075 CNRS CEA UJF, 41 Rue Horowitz, F-38027 Grenoble, France
| | - Erez Raz
- Institute of Cell Biology, Center of Molecular Biology of Inflammation, University of Münster, von-Esmarch-Str. 56, 48149 Münster, Germany
- Max-Planck Institute of Biophysical Chemistry, Am Fassberg 11, 37070 Göttingen, Germany
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Tarbashevich K, Dzementsei A, Pieler T. A novel function for KIF13B in germ cell migration. Dev Biol 2011; 349:169-78. [DOI: 10.1016/j.ydbio.2010.10.016] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2010] [Revised: 09/19/2010] [Accepted: 10/14/2010] [Indexed: 10/18/2022]
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Tarbashevich K, Raz E. The nuts and bolts of germ-cell migration. Curr Opin Cell Biol 2010; 22:715-21. [DOI: 10.1016/j.ceb.2010.09.005] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2010] [Revised: 08/20/2010] [Accepted: 09/16/2010] [Indexed: 12/28/2022]
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Arthur PK, Claussen M, Koch S, Tarbashevich K, Jahn O, Pieler T. Participation of Xenopus Elr-type proteins in vegetal mRNA localization during oogenesis. J Biol Chem 2009; 284:19982-92. [PMID: 19458392 DOI: 10.1074/jbc.m109.009928] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
Directional transport of specific mRNAs is of primary biological relevance. In Xenopus oocytes, mRNA localization to the vegetal pole is important for germ layer formation and germ cell development. Using a biochemical approach, we identified Xenopus Elr-type proteins, homologs of the Hu/ELAV proteins, as novel components of the vegetal mRNA localization machinery. They bind specifically to the localization elements of several different vegetally localizing Xenopus mRNAs, and they are part of one RNP together with other localization proteins, such as Vg1RBP and XStaufen 1. Blocking Elr-type protein binding by either localization element mutagenesis or antisense morpholino oligonucleotide-mediated masking of their target RNA structures, as well as overexpression of wild type and mutant ElrB proteins, interferes with vegetal localization in Xenopus oocytes.
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Affiliation(s)
- Patrick K Arthur
- Department of Developmental Biochemistry, Göttingen Center for Molecular Biosciences, University of Göttingen, 37077 Göttingen, Germany
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