Insights of the efficient hydrogen evolution reaction performance in bimetallic Au4Cu2 nanoclusters

The design of efficient electrocatalysts for improving hydrogen evolution reaction (HER) performance using atomically precise metal nanoclusters (NCs) is an emerging area of research. Here, we have studied the HER electrocatalytic performance of monometallic Cu6 and Au6 nanoclusters and bimetallic Au4Cu2 nanoclusters. A bimetallic Au4Cu2/MoS2 composite exhibits excellent HER catalytic activity with an overpotential (η10) of 155 mV vs. reversible hydrogen electrode observed at 10 mA cm-2 current density. The improved HER performance in Au4Cu2 is due to the increased electrochemically active surface area (ECSA), and Au4Cu2 NCs exhibits better stability than Cu6 and Au6 systems and bare MoS2. This augmentation offers a greater number of active sites for the favorable adsorption of reaction intermediates. Furthermore, by employing X-ray photoelectron spectroscopy (XPS) and Raman analysis, the kinetics of HER in the Au4Cu2/MoS2 composite were elucidated, attributing the favorable performance to better electronic interactions occurring at the interface between Au4Cu2 NCs and the MoS2 substrate. Theoretical analysis reveals that the inherent catalytic enhancement in Au4Cu2/MoS2 is due to favorable H atom adsorption over it and the smallest ΔGH* value. The downshift in the d-band of the Au4Cu2/MoS2 composite influences the binding energy of intermediate catalytic species. This new catalyst sheds light on the structure-property relationship for improving electrocatalytic performance at the atomic level.

Identification of differentially expressed genes and SNPs linked to harvest body weight of genetically improved rohu carp, Labeo rohita

In most of the aquaculture selection programs, harvest body weight has been a preferred performance trait for improvement. Molecular interplay of genes linked to higher body weight is not elucidated in major carp species. The genetically improved rohu carp with 18% average genetic gain per generation with respect to harvest body weight is a promising candidate for studying genes' underlying performance traits. In the present study, muscle transcriptome sequencing of two groups of individuals, with significant difference in breeding value, belonging to the tenth generation of rohu carp was performed using the Illumina HiSeq 2000 platform. A total of 178 million paired-end raw reads were generated to give rise to 173 million reads after quality control and trimming. The genome-guided transcriptome assembly and differential gene expression produced 11,86,119 transcripts and 451 upregulated and 181 downregulated differentially expressed genes (DEGs) between high-breeding value and low-breeding value (HB & LB) groups, respectively. Similarly, 39,158 high-quality coding SNPs were identified with the Ts/Tv ratio of 1.23. Out of a total of 17 qPCR-validated transcripts, eight were associated with cellular growth and proliferation and harbored 13 SNPs. The gene expression pattern was observed to be positively correlated with RNA-seq data for genes such as myogenic factor 6, titin isoform X11, IGF-1 like, acetyl-CoA, and thyroid receptor hormone beta. A total of 26 miRNA target interactions were also identified to be associated with significant DETs (p-value < 0.05). Genes such as Myo6, IGF-1-like, and acetyl-CoA linked to higher harvest body weight may serve as candidate genes in marker-assisted breeding and SNP array construction for genome-wide association studies and genomic selection.

SEDDS Basic Design and Recent Formulation Advancement: A Concurrent Review

In the present scenario, lipid-based novel drug delivery systems are the area of interest for the formulation scientist in order to improve the bioavailability of poorly water-soluble drugs. A selfemulsifying drug delivery system (SEDDS) upon contact with the gastrointestinal fluid, forms an o/w emulsion. SEDDS has gained popularity as a potential platform for improving the bioavailability of the lipophilic drug by overcoming several challenges. The various advantages like improved solubility, bypassing lymphatic transport, and improvement in bioavailability are associated with SMEDDS or SNEDDS. The extent of the formation of stable SEDDS depends on a specific combination of surfactant, co-surfactant, and oil. The present review highlighted the different aspects of formulation design along with optimization and characterization of SEDDS formulation. It also gives a brief description of the various aspects of the excipients used in SEDDS formulation. This review also includes the conflict between types of SEDDS based on droplet size. There is an extensive review of various research regarding different solidification techniques used for SEDDS in the last three years.

Light-Induced Hypoxia in Carbon Quantum Dots and Ultrahigh Photocatalytic Efficiency

Carbon quantum dots (CQDs) represent a class of carbon materials exhibiting photoresponse and many potential applications. Here, we present a unique property that dissolved CQDs capture large amounts of molecular oxygen from the air, the quantity of which can be controlled by light irradiation. The O₂ content can be varied between a remarkable 1 wt % of the CQDs in the dark to nearly half of it under illumination, in a reversible manner. Moreover, O₂ depletion enhances away from the air-solution interface as the nearby CQDs quickly regain them from the air, creating a pronounced concentration gradient in the solution. We elucidate the role of the CQD functional groups and show that excitons generated under light are responsible for their tunable adsorbed-oxygen content. Because of O₂ enrichment, the photocatalytic efficiency of the CQDs toward oxidation of benzylamines in the air is the same as under oxygen flow and far higher than the existing photocatalysts. The findings should encourage the development of a new class of oxygen-enricher materials and air as a sustainable oxidant in chemical transformations.

Ultrathin Twisty PdNi Alloy Nanowires as Highly Active ORR Electrocatalysts Exhibiting Morphology-Induced Durability over 200 K Cycles

Even though the anion exchange membrane fuel cells have many advantages, the stability of their electrocatalysts for oxygen reduction reaction (ORR) has remained remarkably poor. We report here on the ultrathin twisty PdNi-alloy nanowires (NWs) exhibiting a very low reaction overpotential with an E_1/2 ∼ 0.95 V versus RHE in alkaline media maintained over 200 K cycles, the highest ever recorded for an electrocatalyst. The mass activity of the used NWs is >10 times higher than fresh commercial Pt/C. Therein, Ni improves the Pd d-band center for a more efficient ORR, and its leaching continuously regenerates the surface active sites. The twisty nanowire morphology imparts multiple anchor points on the electrode surface to arrest their detachment or coalescence and extra stability from self-entanglement. The significance of the NW morphology was further confirmed from the high-temperature durability studies. The study demonstrates that tailoring the number of contact points to the electrode-surface may help realize commercial-grade stability in the highly active electrocatalysts.

Facile d-band tailoring in Sub-10 nm Pd cubes by in-situ grafting on nitrogen-doped graphene for highly efficient organic transformations

We demonstrate for the first time the in-situ synthesis of Pd nanocubes (PdNC) on nitrogen-doped reduced graphene oxide (NRGO) for facile organic transformations wherein the cubic morphology of Pd can only be realized by precision-controlled acid additions in the tune of 0.02 pH variations in the reaction medium. Due to the intimate contact arising from atom-by-atom addition of Pd on NRGO, the composite has exhibited a pronounced catalyst to support charge transfer effect, shift in the d-band center, and lowering of charge-transfer resistance when compared with PdNC-NRGO ex-situ composites prepared by mixing of the preformed components of PdNC and NRGO or PdNCs alone. The activities of these catalysts were tested for the Suzuki coupling and nitroarene reduction reactions using water as an industry-friendly solvent. In both, the in-situ deposited sample exhibited substantially higher catalytic activity as well as stability when compared with an ex-situ sample or pure PdNCs. We show that a very high turnover frequency of ~31300 h^-1 and ~900 h^-1 are achievable by using the in-situ deposited PdNC-NRGO composite for Suzuki coupling reactions and nitroarene reduction respectively, better than the state-of-the-art catalysts developed recently, in addition to high recyclability.

'Pre-optimization' of the solvent of nanoparticle synthesis for superior catalytic efficiency: a case study with Pd nanocrystals

In view of a limited rationale available for designing metal nanocrystals (NCs) to achieve high catalytic activities across various chemical transformations, we offer a new perspective on the optimization of the 'solvent-of-nanocrystal-synthesis' that, to an extent, would help bypass the tedious characterization needs. A systematic improvement in a catalyst is hindered because (i) it relies on size & shape control protocols, surface characterization, understanding molecular transformation mechanisms, and the energetics of the reactant-catalyst interactions, requiring the involvement of different domains experts, and (ii) the insights developed using model reactions may not easily extend to other reactions, although the current studies count on such a hypothesis. In support of (ii), by taking Pd NCs as catalysts and two distinct reaction types, viz. Suzuki coupling and nitroarene reduction, we show to what great extent the reaction rates may vary even for the seemingly similar reactions by using the same NCs. More importantly, for challenge (i), we demonstrate how the addition of a single-step to the current protocol of 'catalyst-synthesis and activity test' can potentially lead to the development of highly active catalysts by first finding a suitable solvent for the NC synthesis, while such solvent-effects are barely considered unlike the same in organic transformation reactions as a matter of routine, for example.

3D Porous Polymeric-Foam-Supported Pd Nanocrystal as a Highly Efficient and Recyclable Catalyst for Organic Transformations

The efficient recovery of noble metal nanocrystals used in heterogeneous organic transformations has remained a significant challenge, hindering their use in industry. Herein, highly catalytic Pd nanoparticles (NPs) were first prepared having a yield of >98% by a novel hydrothermal method using PVP as the reducing cum stabilizing agent that exhibited excellent turnover frequencies of ∼38,000 h^-1 for Suzuki-Miyaura cross-coupling and ∼1200 h^-1 for catalytic reduction of nitroarene compounds in a benign aqueous reaction medium. The Pd NPs were more efficient for cross-coupling of aryl compounds with electron-donating substituents than with electron-donating ones. Further, to improve their recyclability, a strategy was developed to embed these Pd NPs on mechanically robust polyurethane foam (PUF) for the first time and a "dip-catalyst" (Pd-PUF) containing 3D interconnected 100-500 μm pores was constructed. The PUF was chosen as the support with an expectation to reduce the fabrication cost of the "dip-catalyst" as the production of PUF is already commercialized. Pd-PUF could be easily separated from the reaction aliquot and reused without any loss of activity because the leaching of Pd NPs was found to be negligible in the various reaction mixtures. We show that the Pd-PUF could be reused for over 50 catalytic cycles maintaining a similar activity. We further demonstrate a scale-up reaction with a single-reaction 1.5 g yield for the Suzuki-Miyaura cross-coupling reaction.

Nanocrystalline Ag3PO4 for Sunlight- and Ambient Air-Driven Oxidation of Amines: High Photocatalytic Efficiency and a Facile Catalyst Regeneration Strategy

Selective oxidation of amines to imines using sunlight as clean and renewable energy source is an important but challenging chemical transformation because of high reactivity of the generated imines and lack of visible light-responsive materials with high conversion rates. In addition, oxygen gas has to be purged in the reaction mixture in order to increase the reaction efficiency which, in itself, is an energy-consuming process. Herein, we report, for the first time, the use of Ag₃PO₄ as an excellent photocatalyst for the oxidative coupling of benzyl amines induced by ambient air in the absence of any external source of molecular oxygen at room temperature. The conversion efficiency for the selective oxidation of benzyl amine was found to be greater than 95% with a selectivity of >99% after 40 min of light irradiation indicating an exceptionally high conversion efficiency with a rate constant of 0.002 min^-1, a turnover frequency of 57 h^-1, and a quantum yield of 19%, considering all of the absorbed photons. Ag₃PO₄, however, is known for its poor photostability owing to a positive conduction band position and a favorable reduction potential to metallic silver. Therefore, we further employed a simple catalyst regeneration strategy and showed that the catalyst can be recycled with negligible loss of activity and selectivity.

High and reversible oxygen uptake in carbon dot solutions generated from polyethylene facilitating reactant-enhanced solar light harvesting

Solar-driven photocatalysis is emerging as a key chemical transformation strategy due to its favourable energy economy. However, in photocatalytic oxidation reactions where molecular oxygen (O2) is a reactant, achieving higher efficiency requires an O2-saturated environment in order to maintain a high oxygen level on the catalyst surface, necessitating an additional energy-consuming step of O2 separation from air. Here we show that in the presence of carbon quantum dots (CQDs), the oxygen content and the ability of O2 to diffuse in water increase significantly. We first demonstrate a novel strategy to convert several grams of polyethylene, a stubborn pollutant, into highly photoactive CQDs by stepwise dehydrogenation and graphitization. In a typical CQD concentration of ∼1 mg ml-1, the oxygen level in water reaches ∼640 μM, double that of pure water inferring an extremely high O2 content of ∼1 wt% associated with CQDs under ambient conditions. Therefore, when the CQDs were used to catalyze photo-oxidation of aromatic alcohols by sunlight, the efficiency was found higher than previous instances despite those employing high oxygen pressure, temperature and expensive materials. Besides waste polyethylene utilization, the uniqueness of oxygen enrichment in CQD solutions may offer immense prospects including those in photo-oxidation reactions.

Molecular characterization, computational analysis and expression profiling of Dmrt1 gene in Indian major carp, Labeo rohita (Hamilton 1822)

Sexual dimorphism of fish morphology, physiology and behavior is diverse and complex in nature. Doublesex and mab-3 related transcription factor (Dmrt) is a large protein family whose function is sexual development and differentiation in vertebrates. Here, we report a full-length cDNA sequence of Labeo rohita (rohu) Dmrt1 of 907 bp length having 798 bp of open reading frame encoding 265 amino acids. The molecular weight of rohu DMRT1 protein was found to be 28.74 KDa and isoelectric point was 7.53. DMRT1 protein contains 23 positively and 24 negatively charged amino acids with a GRAVY score of -0.618. A characteristic DM domain was found in DMRT1 protein, which is a novel DNA-binding domain. Phylogenetic analysis showed maximum similarity with Cyprinus carpio when compared with DMRT1 of other vertebrates. Molecular docking study identified active sites to be targeted for drug designing. Rohu DMRT1 was observed to interact with other proteins such as FOXL2, CYP19a1a, AMH and SOX9a. Differential expression study revealed higher expression in testis tissue implying its role in male sex differentiation and testicular development. The information generated in the present work could facilitate further research to resolve the issues related to gonadal maturation and reproduction of commercially important aquaculture species.

Synthesis of Bi3TaO7–Bi4TaO8Br composites in ambient air and their high photocatalytic activity upon metal loading

Cocatalyst loading on ambient-air synthesized Bi₃TaO₇–Bi₄TaO₈X (X = Cl, Br) composites for highly suppressed exciton recombination and efficient solar light harvesting.

Self-immobilized Pd nanowires as an excellent platform for a continuous flow reactor: efficiency, stability and regeneration

Despite extensive use of Pd nanocrystals as catalysts, the realization of a Pd-based continuous flow reactor remains a challenge. Difficulties arise due to ill-defined anchoring of the nanocrystals on a substrate and reactivity of the substrate under different reaction conditions. We demonstrate the first metal (Pd) nanowire-based catalytic flow reactor that can be used across different filtration platforms, wherein, reactants flow through a porous network of nanowires (10-1000 nm pore sizes) and the product can be collected as filtrate. Controlling the growth parameters and obtaining high aspect ratio of the nanowires (diameter = ∼13 nm and length > 8000 nm) is necessary for successful fabrication of this flow reactor. The reactor performance is similar to a conventional reactor, but without requiring energy-expensive mechanical stirring. Synchrotron-based EXAFS studies were used to examine the catalyst microstructure and Operando FT-IR spectroscopic studies were used to devise a regenerative strategy. We show that after prolonged use, the catalyst performance can be regenerated up to 99% by a simple wash-off process without disturbing the catalyst bed. Thus, collection, regeneration and redispersion processes of the catalyst in conventional industrial reactors can be avoided. Another important advantage is avoiding specific catalyst-anchoring substrates, which are not only expensive, but also non-universal in nature.

Emerging Materials in Heterogeneous Electrocatalysis Involving Oxygen for Energy Harvesting

Water-based renewable energy cycle involved in water splitting, fuel cells, and metal-air batteries has been gaining increasing attention for sustainable generation and storage of energy. The major challenges in these technologies arise due to the poor kinetics of the oxygen reduction reaction (ORR) and the oxygen evolution reactions (OER), besides the high cost of the catalysts. Attempts to address these issues have led to the development of many novel and inexpensive catalysts as well as newer mechanistic insights, particularly so in the last three-four years when more catalysts have been investigated than ever before. With the growing emphasis on bifunctionality, that is, materials that can facilitate both reduction and evolution of oxygen, this review is intended to discuss all major families of ORR, OER, and bifunctional catalysts such as metals, alloys, oxides, other chalcogenides, pnictides, and metal-free materials developed during this period in a single platform, while also directing the readers to specific and detailed review articles dealing with each family. In addition, each section highlights the latest theoretical and experimental insights that may further improve ORR/OER performances. The bifunctional catalysts being sufficiently new, no consensus appears to have emerged about the efficiencies. Therefore, a statistical analysis of their performances by considering nearly all literature reports that have appeared in this period is presented. The current challenges in rational design of these catalysts as well as probable strategies to improve their performances are presented.

Population structure and genetic diversity of hatchery stocks as revealed by combined mtDNA fragment sequences in Indian major carp, Catla catla

Catla catla is the second most important Indian major carp due to high growth rate and acceptance to consumers for food value. It is widely cultured in the Indian subcontinent as monoculture or polyculture. In the present study, genetic diversity among hatchery stocks (total 218 samples of catla) collected from different geographical regions of India was examined using mtDNA fragment sequence of Cyt b (306 bp) and D loop (710 bp). High numbers (57) of population specific haplotypes were observed in the present study. The results revealed significant genetic heterogeneity for the sequence data (F_ST = 0.27546, p < .05). Analysis of molecular variance revealed significant genetic differentiation among different catla populations. The information generated in present study could be useful to develop broad genetic base populations of catla.

Rapid recovery of complete mitogenome of Indian major carp, Catla catla from low depth paired end Illumina sequencing

Here we report the reconstruction of the catla (Catla catla) complete mitochondrial genome sequence from low depth paired end Illumina sequencing. The genome is of 16,597 bp in size. Similar to other vertebrate mtgenomes, it consists of 13 protein-coding genes, 22 tRNAs, 2 rRNAs and a putative control region. The present mtgenome is 3 bp longer than the earlier reported catla mtgenome from our laboratory. Majority of the mitochondrial genes are encoded by the H-strand. Phylogenetics analysis revealed that Catla catla is closer to Labeo rohita than other labeo species. Present study demonstrated the power of next generation sequencing towards hassle free and rapid sequencing of mitochondrial genomes of non-model organisms.

Low-depth shotgun sequencing resolves complete mitochondrial genome sequence of Labeo rohita

Labeo rohita, popularly known as rohu, is a widely cultured species in whole Indian subcontinent. In the present study, we used in-silico approach to resolve complete mitochondrial genome of rohu. Low-depth shotgun sequencing using Roche 454 GS FLX (Branford, Connecticut, USA) followed by de novo assembly in CLC Genomics Workbench version 7.0.4 (Aarhus, Denmark) revealed the complete mitogenome of L. rohita to be 16 606 bp long (accession No. KR185963). It comprised of 13 protein-coding genes, 22 tRNAs, 2 rRNAs and 1 putative control region. The gene order and organization are similar to most vertebrates. The mitogenome in the present investigation has 99% similarity with that of previously reported mitogenomes of rohu and this is also evident from the phylogenetic study using maximum-likelihood (ML) tree method. This study was done to determine the feasibility, accuracy and reliability of low-depth sequence data obtained from NGS platform as compared to the Sanger sequencing. Thus, NGS technology has proven to be competent and a rapid in-silico alternative to resolve the complete mitochondrial genome sequence, thereby reducing labors and time.

Genetic relationship and population structure of three Indian local chicken populations as revealed by mtDNA D-loop

The genetic information obtained from the mitochondrial DNA D-loop region has paramount importance in understanding the evolution of closely related individuals, and designing proper breeding or conservation plans. The present study was conducted using partial D-loop sequences of three local poultry populations from Odisha, India. The partial D-loop sequences were found to be highly polymorphic having 164 polymorphic sites with 89 singletons and 75 parsimony informative sites. Furthermore, 25 insertion and deletion sites were observed. High genetic diversity was observed within three local chicken populations. Highest genetic difference was observed between Gujuri and Kalua population (0.2230) followed by Gujuri and Hansli (0.199) and Kalua with Hansli (0.166). The pairwise mismatch distribution showed that all populations are of constant size over time. Phylogenetic tree analysis indicated that the said three populations were close to the referred population of China, Sri Lanka, Indonesia and Japan than Aseel and Kadaknath (Indian native breeds).

Complete mitochondrial genome sequence of Cirrhinus mrigala (Hamilton, 1822)

The complete mitochondrial genome of Cirrhinus mrigala was determined using the polymerase chain reaction. The mitogenome (16,594 bp) has the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 22 tRNA genes, two rRNA genes and one control region. The overall base composition on the heavy strand was as follows: A: 32.0%, G: 15.5%, C: 28.0%, T: 24.55% and the A+T content: 56.5%. The control region contains a dinucleotide repeat motif, (TA)14, a termination-associated sequence and three conserved sequence blocks. These mitogenome sequence data would play an important role in population genetics and the molecular taxonomy of cultivable cyprinids in India.

Complete mitochondrial genome sequence of Catla catla and its phylogenetic consideration

Complete nucleotide sequence of mitochondrial genome (mitogenome) of the Catla catla (Ostariophysi: Cypriniformes: Cyprinidae) was determined in the present study. Its length is 16,594 bp and contains 13 protein coding genes, 22 transfer RNAs, two ribosomal RNAs and one non-coding control region. Most of the genes were encoded on the H-strand, while the ND6 and eight tRNA (Gln, Ala, Asn, Cys, Tyr, Ser (UCN), Glu and Pro) genes were encoded on the L-strand. The reading frames of two pair of genes overlapped: ATPase 8 with 6 and ND4L with ND4 by seven nucleotides each. The main non-coding region was 929 bp, with three conserved sequence blocks (CSB-I, CSB-II, and CSB-III) and an unusual simple sequence repeat, (TA)(7). Phylogenetic analyses based on complete mitochondrial genome sequences were in favor of the traditional taxonomy of family Cyprinidae. In conclusion present mitogenome of Catla catla adds more information to our understanding of diversity and evolution of mitogenome in fishes.

Complete mitochondrial genome of Labeo rohita

The complete mitochondrial genome of Labeo rohita, an important cultivable fish, was determined for the first time. The genome is 16,611 bp in length and consists of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and one control region. The gene organisation and its order were similar to other vertebrates. The overall base composition on heavy strand was as follows A: 32.5%, G: 15.2%, C: 27.7%, T: 24.47%, and the A+T content 56.9%. The control region contains a microsatellite, (TA)(12), a putative termination-associated sequence and three conserved sequence blocks. This mitogenome sequence data would play an important role in population genetics and phylogenetics of Indian major carps.

Additional virulence genes in conjunction with efficient selection scheme, and compatible culture regime enhance recovery of stable transgenic plants in cowpea via Agrobacterium tumefaciens-mediated transformation

A critical step in the development of robust Agrobacterium tumefaciens-mediated transformation system in recalcitrant grain legume, cowpea is the establishment of optimal conditions for efficient T-DNA delivery into target tissue and recovery of transgenic plants. A dramatic increase in efficiency of T-DNA delivery was achieved by constitutive expression of additional vir genes in resident pSB1 vector in Agrobacterium strain LBA4404. A geneticin based selection system permitted rapid and efficient identification of transgenic shoots without interfering with their regeneration, and eliminated the bulk of escapes. Supplementation of 0.5 microM kinetin to medium containing 5.0 microM benzyl aminopurine after 1 week of culture followed by 3 weeks of culture were found critical for optimal multiplication and elongation of transformed shoots from cotyledonary node explants. Combining these three developments, we recovered fertile transgenic plants at a frequency of 1.64%, significantly higher than previous reports. The presence, integration, expression and inheritance of transgenes were confirmed by molecular analysis. The protocol developed for cultivar Pusa Komal will facilitate the transfer of desirable traits into cowpea.