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Bernasconi R, Lund MA, Blanchette ML. Non-charismatic waterbodies and ecosystem disservices: Mine pit lakes are underrepresented in the literature. Front Microbiol 2022; 13:1063594. [PMID: 36523823 PMCID: PMC9745135 DOI: 10.3389/fmicb.2022.1063594] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Accepted: 11/07/2022] [Indexed: 11/03/2023] Open
Abstract
Pit lakes are one of the greatest legacies of open-cut mining. Despite the potential hazards of these lakes, they represent newly formed ecosystems with great scientific and ecological potential. Although thousands of pit lakes occur on every inhabited continent, with more being created, the microbial ecology of pit lakes is relatively under-researched. We evaluated the current state of microbial research in pit lakes by performing a Web of Science search and creating a literature database. Study lakes were categorized according to location and water quality (pH and conductivity) which is a key community and environmental concern. Research technology employed in the study was also categorized. We compared research effort in lakes, rivers, and streams which are the more "charismatic" inland aquatic ecosystems. Pit lake publications on microbes from 1987 to 2022 (n = 128) were underrepresented in the literature relative to rivers and streams (n = 321) and natural lakes (n = 948). Of the 128 pit lake publications, 28 were within the field of geochemistry using indirect measures of microbial activity. Most pit lake microbial research was conducted in a few acidic lakes in Germany due to social pressure for remediation and government initiative. Relatively few studies have capitalized on emerging technology. Pit lake microbial research likely lags other more charismatic ecosystems given that they are viewed as performing "ecosystem disservices," but this is socially complex and requires further research. Improving understanding of microbial dynamics in pit lakes will allow scientists to deliver safer pit lakes to communities.
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Affiliation(s)
- Rachele Bernasconi
- Mine Water and Environment Research Centre (MiWER), School of Science, Edith Cowan University, Joondalup, WA, Australia
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Blanchette ML, Lund MA. Aquatic Ecosystems of the Anthropocene: Limnology and Microbial Ecology of Mine Pit Lakes. Microorganisms 2021; 9:microorganisms9061207. [PMID: 34204924 PMCID: PMC8228816 DOI: 10.3390/microorganisms9061207] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 05/23/2021] [Accepted: 05/28/2021] [Indexed: 01/04/2023] Open
Abstract
Mine pit lakes ('pit lakes') are new aquatic ecosystems of the Anthropocene. Potentially hundreds of meters deep, these lakes are prominent in the landscape and in the public consciousness. However, the ecology of pit lakes is underrepresented in the literature. The broad goal of this research was to determine the environmental drivers of pelagic microbe assemblages in Australian coal pit lakes. The overall experimental design was four lakes sampled three times, top and bottom, in 2019. Instrument chains were installed in lakes and measurements of in situ water quality and water samples for metals, metalloids, nutrients and microbe assemblage were collected. Lakes were monomictic and the timing of mixing was influenced by high rainfall events. Water quality and microbial assemblages varied significantly across space and time, and most taxa were rare. Lakes were moderately saline and circumneutral; Archeans were not prevalent. Richness also varied by catchment. Microbial assemblages correlated to environmental variables, and no one variable was consistently significant, spatially or temporally. Study lakes were dominated by 'core' taxa exhibiting temporal turnover likely driven by geography, water quality and interspecific competition, and the presence of water chemistry associated with an artificial aquifer likely influenced microbial community composition. Pit lakes are deceptively complex aquatic ecosystems that host equally complex pelagic microbial communities. This research established links between microbial assemblages and environmental variables in pit lakes and determined core communities; the first steps towards developing a monitoring program using microbes.
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Shumilova O, Zak D, Datry T, von Schiller D, Corti R, Foulquier A, Obrador B, Tockner K, Allan DC, Altermatt F, Arce MI, Arnon S, Banas D, Banegas‐Medina A, Beller E, Blanchette ML, Blanco‐Libreros JF, Blessing J, Boëchat IG, Boersma K, Bogan MT, Bonada N, Bond NR, Brintrup K, Bruder A, Burrows R, Cancellario T, Carlson SM, Cauvy‐Fraunié S, Cid N, Danger M, de Freitas Terra B, Girolamo AMD, del Campo R, Dyer F, Elosegi A, Faye E, Febria C, Figueroa R, Four B, Gessner MO, Gnohossou P, Cerezo RG, Gomez‐Gener L, Graça MA, Guareschi S, Gücker B, Hwan JL, Kubheka S, Langhans SD, Leigh C, Little CJ, Lorenz S, Marshall J, McIntosh A, Mendoza‐Lera C, Meyer EI, Miliša M, Mlambo MC, Moleón M, Negus P, Niyogi D, Papatheodoulou A, Pardo I, Paril P, Pešić V, Rodriguez‐Lozano P, Rolls RJ, Sanchez‐Montoya MM, Savić A, Steward A, Stubbington R, Taleb A, Vorste RV, Waltham N, Zoppini A, Zarfl C. Simulating rewetting events in intermittent rivers and ephemeral streams: A global analysis of leached nutrients and organic matter. Glob Chang Biol 2019; 25:1591-1611. [PMID: 30628191 PMCID: PMC6850495 DOI: 10.1111/gcb.14537] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Accepted: 10/07/2018] [Indexed: 06/01/2023]
Abstract
Climate change and human pressures are changing the global distribution and the extent of intermittent rivers and ephemeral streams (IRES), which comprise half of the global river network area. IRES are characterized by periods of flow cessation, during which channel substrates accumulate and undergo physico-chemical changes (preconditioning), and periods of flow resumption, when these substrates are rewetted and release pulses of dissolved nutrients and organic matter (OM). However, there are no estimates of the amounts and quality of leached substances, nor is there information on the underlying environmental constraints operating at the global scale. We experimentally simulated, under standard laboratory conditions, rewetting of leaves, riverbed sediments, and epilithic biofilms collected during the dry phase across 205 IRES from five major climate zones. We determined the amounts and qualitative characteristics of the leached nutrients and OM, and estimated their areal fluxes from riverbeds. In addition, we evaluated the variance in leachate characteristics in relation to selected environmental variables and substrate characteristics. We found that sediments, due to their large quantities within riverbeds, contribute most to the overall flux of dissolved substances during rewetting events (56%-98%), and that flux rates distinctly differ among climate zones. Dissolved organic carbon, phenolics, and nitrate contributed most to the areal fluxes. The largest amounts of leached substances were found in the continental climate zone, coinciding with the lowest potential bioavailability of the leached OM. The opposite pattern was found in the arid zone. Environmental variables expected to be modified under climate change (i.e. potential evapotranspiration, aridity, dry period duration, land use) were correlated with the amount of leached substances, with the strongest relationship found for sediments. These results show that the role of IRES should be accounted for in global biogeochemical cycles, especially because prevalence of IRES will increase due to increasing severity of drying events.
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Affiliation(s)
- Oleksandra Shumilova
- Leibniz‐Institute of Freshwater Ecology and Inland Fisheries (IGB)BerlinGermany
- Institute of BiologyFreie Universität Berlin (FU)BerlinGermany
- Department of CivilEnvironmental and Mechanical EngineeringTrento UniversityTrentoItaly
| | - Dominik Zak
- Institute of BiologyFreie Universität Berlin (FU)BerlinGermany
- Institute of Landscape Ecology and Site EvaluationUniversity of RostockRostockGermany
- Department of BioscienceAarhus UniversitySilkeborgDenmark
| | - Thibault Datry
- IRSTEAUR RIVERLYCentre de Lyon‐VilleurbanneVilleurbanne CedexFrance
| | - Daniel von Schiller
- Department of Plant Biology and EcologyFaculty of Science and TechnologyUniversity of the Basque Country (UPV/EHU)BilbaoSpain
| | - Roland Corti
- IRSTEAUR RIVERLYCentre de Lyon‐VilleurbanneVilleurbanne CedexFrance
| | - Arnaud Foulquier
- Laboratoire d’Écologie Alpine (LECA)UMR CNRS‐UGA‐USMB 5553Université Grenoble AlpesGrenobleFrance
| | - Biel Obrador
- Department of Evolutionary Biology, Ecology and Environmental SciencesFaculty of BiologyBiodiversity Research Institute (IRBIO)University of BarcelonaBarcelonaSpain
| | - Klement Tockner
- Leibniz‐Institute of Freshwater Ecology and Inland Fisheries (IGB)BerlinGermany
- Institute of BiologyFreie Universität Berlin (FU)BerlinGermany
- Austrian Science Fund (FWF)ViennaAustria
| | | | - Florian Altermatt
- Department of Evolutionary Biology and Environmental StudiesUniversity of ZurichZürichSwitzerland
| | - María Isabel Arce
- Leibniz‐Institute of Freshwater Ecology and Inland Fisheries (IGB)BerlinGermany
- Centre of Edaphology and Applied Biology of Segura (CEBAS‐CSIC)MurciaSpain
| | - Shai Arnon
- Zuckerberg Institute for Water ResearchThe Jacob Blaustein Institutes for Desert ResearchBen‐Gurion University of the NegevBeershebaIsrael
| | - Damien Banas
- Université de Lorraine ‐ UR AFPAVandoeuvre‐Les‐NancyFrance
| | - Andy Banegas‐Medina
- Faculty of Environmental Science and EULA‐Chile CenterUniversidad de ConcepciónConcepciónChile
| | - Erin Beller
- Department of GeographyUniversity of CaliforniaBerkeleyCalifornia
| | - Melanie L. Blanchette
- Mine Water and Environment Research Centre (MiWER)School of ScienceEdith Cowan UniversityPerthAustralia
| | | | - Joanna Blessing
- Department of Environment and ScienceQueensland GovernmentBrisbaneQldAustralia
| | | | - Kate Boersma
- Department of BiologyUniversity of San DiegoSan DiegoCalifornia
| | - Michael T. Bogan
- School of Natural Resources and the EnvironmentUniversity of ArizonaTucsonArizona
| | - Núria Bonada
- Grup de Recerca Freshwater Ecology, Hydrology and Management (FEHM)Departament de Biologia EvolutivaEcologia i Ciències AmbientalsInstitut de Recerca de la Biodiversitat (IRBio)Universitat de BarcelonaBarcelonaSpain
| | - Nick R. Bond
- Centre for Freshwater EcosystemsLa Trobe UniversityWodongaVic.Australia
| | - Kate Brintrup
- Faculty of Environmental Science and EULA‐Chile CenterUniversidad de ConcepciónConcepciónChile
| | - Andreas Bruder
- Laboratory of Applied MicrobiologyUniversity of Applied Sciences and Arts of Southern SwitzerlandBellinzonaSwitzerland
| | - Ryan Burrows
- Australian Rivers InstituteGriffith UniversityNathanQldAustralia
| | - Tommaso Cancellario
- Department of Environmental BiologyBiodiversity Data Analytics and Environmental Quality GroupUniversity of NavarraPamplonaSpain
| | - Stephanie M. Carlson
- Department of Environmental Science, Policy, and ManagementUniversity of CaliforniaBerkeleyCalifornia
| | | | - Núria Cid
- Grup de Recerca Freshwater Ecology, Hydrology and Management (FEHM)Departament de Biologia EvolutivaEcologia i Ciències AmbientalsInstitut de Recerca de la Biodiversitat (IRBio)Universitat de BarcelonaBarcelonaSpain
| | | | | | - Anna Maria De Girolamo
- Water Research Institute – National Research Council (IRSA‐CNR)Montelibretti (Rome)Italy
| | - Ruben del Campo
- Leibniz‐Institute of Freshwater Ecology and Inland Fisheries (IGB)BerlinGermany
- Department of Ecology and HydrologyRegional Campus of International Excellence ‘Campus Mare Nostrum’ – University of MurciaMurciaSpain
| | - Fiona Dyer
- Institute for Applied EcologyUniversity of CanberraBruceCanberra ACTAustralia
| | - Arturo Elosegi
- Department of Plant Biology and EcologyFaculty of Science and TechnologyUniversity of the Basque Country (UPV/EHU)BilbaoSpain
| | - Emile Faye
- Centre International de Recherche en Agronomie pour le DéveloppementCIRADUPR HortSysMontpellierFrance
| | - Catherine Febria
- School of Biological SciencesUniversity of CanterburyChristchurchNew Zealand
- Great Lakes Institute for Environmental ResearchUniversity of WindsorWindsorCanada
| | - Ricardo Figueroa
- Faculty of Environmental Science and EULA‐Chile CenterUniversidad de ConcepciónConcepciónChile
| | - Brian Four
- INRAUAR 1275 DEPT EFPACentre de recherche de NancyChampenouxFrance
| | - Mark O. Gessner
- Leibniz‐Institute of Freshwater Ecology and Inland Fisheries (IGB)BerlinGermany
- Department of EcologyBerlin Institute of Technology (TU Berlin)BerlinGermany
| | - Pierre Gnohossou
- Faculté d'AgronomieDépartement d'Aménagement et de Gestion des Ressources NaturellesUniversité de ParakouParakouBenin
| | - Rosa Gómez Cerezo
- Department of Ecology and HydrologyRegional Campus of International Excellence ‘Campus Mare Nostrum’ – University of MurciaMurciaSpain
| | - Lluís Gomez‐Gener
- Department of Ecology and Environmental ScienceUmeå UniversityUmeåSweden
| | - Manuel A.S. Graça
- MARE – Marine and Environmental Sciences CentreDepartment of Life SciencesUniversity of CoimbraCoimbraPortugal
| | - Simone Guareschi
- Department of Ecology and HydrologyRegional Campus of International Excellence ‘Campus Mare Nostrum’ – University of MurciaMurciaSpain
| | - Björn Gücker
- Department of GeosciencesFederal University of São João del‐ReiSão João del‐ReiBrazil
| | - Jason L. Hwan
- Department of Environmental Science, Policy, and ManagementUniversity of CaliforniaBerkeleyCalifornia
| | | | - Simone Daniela Langhans
- Department of ZoologyUniversity of OtagoDunedinNew Zealand
- BC3‐Basque Centre for Climate ChangeLeioaSpain
| | - Catherine Leigh
- Australian Rivers InstituteGriffith UniversityNathanQldAustralia
- ARC Centre of Excellence for Mathematical & Statistical Frontiers (ACEMS) and Institute for Future EnvironmentsSchool of Mathematical SciencesQueensland University of TechnologyBrisbaneQldAustralia
| | - Chelsea J. Little
- Department of Evolutionary Biology and Environmental StudiesUniversity of ZurichZürichSwitzerland
- Department of Aquatic Ecology, EawagThe Swiss Federal Institute of Aquatic Science and TechnologyDübendorfSwitzerland
| | - Stefan Lorenz
- Institute for Ecological ChemistryPlant Analysis and Stored Product ProtectionJulius‐Kuehn‐InstituteBerlinGermany
| | - Jonathan Marshall
- Department of Environment and ScienceQueensland GovernmentBrisbaneQldAustralia
- Australian Rivers InstituteGriffith UniversityNathanQldAustralia
| | - Angus McIntosh
- School of Biological SciencesUniversity of CanterburyChristchurchNew Zealand
| | - Clara Mendoza‐Lera
- IRSTEAUR RIVERLYCentre de Lyon‐VilleurbanneVilleurbanne CedexFrance
- Department of Freshwater ConservationBTU Cottbus‐SenftenbergBad SaarowGermany
| | | | - Marko Miliša
- Department of BiologyFaculty of ScienceUniversity of ZagrebZagrebCroatia
| | - Musa C. Mlambo
- Department of Freshwater InvertebratesAlbany MuseumAffiliated Research Institute of Rhodes UniversityGrahamstownSouth Africa
| | - Marcos Moleón
- Department of ZoologyUniversity of GranadaGranadaSpain
| | - Peter Negus
- Department of Environment and ScienceQueensland GovernmentBrisbaneQldAustralia
| | - Dev Niyogi
- Missouri University of Science and TechnologyRollaMissouri
| | | | - Isabel Pardo
- Departamento de Ecología y Biología AnimalUniversidad de VigoVigoSpain
| | - Petr Paril
- Department of Botany and ZoologyFaculty of ScienceMasaryk UniversityBrnoCzech Republic
| | - Vladimir Pešić
- Department of BiologyUniversity of MontenegroPodgoricaMontenegro
| | - Pablo Rodriguez‐Lozano
- Department of Environmental Science, Policy, and ManagementUniversity of CaliforniaBerkeleyCalifornia
| | - Robert J. Rolls
- School of Environmental and Rural ScienceUniversity of New EnglandArmidaleNSWAustralia
| | - Maria Mar Sanchez‐Montoya
- Department of Ecology and HydrologyRegional Campus of International Excellence ‘Campus Mare Nostrum’ – University of MurciaMurciaSpain
| | - Ana Savić
- Department of Biology and EcologyFaculty of Sciences and MathematicsUniversity of NišNišSerbia
| | - Alisha Steward
- Department of Environment and ScienceQueensland GovernmentBrisbaneQldAustralia
- Australian Rivers InstituteGriffith UniversityNathanQldAustralia
| | | | - Amina Taleb
- Laboratoire d’Écologie et Gestion des Ecosystèmes Naturels (LECGEN)University of TlemcenTlemcenAlgeria
| | - Ross Vander Vorste
- Department of Environmental Science, Policy, and ManagementUniversity of CaliforniaBerkeleyCalifornia
| | - Nathan Waltham
- TropWATER (Centre for Tropical Water and Aquatic Ecosystem Research)College of Science and EngineeringJames Cook UniversityTownsvilleQldAustralia
| | - Annamaria Zoppini
- Water Research Institute – National Research Council (IRSA‐CNR)Montelibretti (Rome)Italy
| | - Christiane Zarfl
- Center for Applied GeosciencesEberhard Karls Universität TübingenTübingenGermany
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