Vis-NIR spectroscopy based rapid and non-destructive method to quantitate microplastics: An emerging contaminant in farm soil

Microplastics (MPs) is the second most important environmental issue and can potentially enter into food chain through farmland contamination and other means. There are no standardized extraction methods for quantification of MPs in soil. The embedded errors and biases generated serious problems regarding the comparability of different studies and leading to erroneous estimation. To address this gap, present study was formulated to develop an efficient method for MPs analysis suitable for a wide range of soil and organic matrices. A method based on Vis-NIR (Visible-Near Infra Red) spectroscopy is developed for four different soil belonging to Alfisol, Inceptisol, Mollisol and Vertisol and two organic matter matrices (FYM and Sludge). The developed method was found as rapid, reproducible, non-destructive and accurate method for estimation of all three-density groups of MPs (Low, Medium and High) with a prediction accuracy ranging from 1.9 g MPs/kg soil (Vertisol) to 3.7 g MPs/kg soil (Alfisol). Two different regression models [Partial Least Square Regression (PLSR) and Principal Component Regression (PCR)] were assessed and PLSR was found to provide better information in terms of prediction accuracy and minimum quantification limit (MQL). However, PCR performed better for organic matter matrices than PLSR. The method avoids any complicated sample preparation steps except drying and sieving thus saving time and acquisition of reflectance spectrum for single sample is possible within 18 s. Owing to have the minimum quantification limit ranging from 1.9-3.7 g/kg soil, the vis-NIR based method is perfectly suitable for estimation of MPs in soil samples collected from plastic pollution hotspots like landfill sites, regular based sludge amended farm soils. Additionally, the method can be adapted by small scale compost industries for assessing MPs load in product like city compost which are applied at agricultural fields and will be helpful in quantifying possible MPs at the sources itself.

Nitrogen-enriched biochar co-compost for the amelioration of degraded tropical soil

Tropical soils are often deeply weathered and vulnerable to degradation having low pH and unfavorable Al/Fe levels, which can constrain crop production. This study aims to examine nitrogen-enriched novel biochar co-composts prepared from rice straw, maize stover, and gram residue in various mixing ratios of the biochar and their feedstock materials for the amelioration of acidic tropical soil. Three pristine biochar and six co-composts were prepared, characterized, and evaluated for improving the chemical and biological quality of the soil against a conventional lime treatment. The pH, cation exchange capacity (CEC), calcium carbonate equivalence (CCE) and nitrogen content of co-composts varied between 7.78-8.86, 25.3-30.5 cmol (p+) kg-1, 25.5-30.5%, and 0.81-1.05%, respectively. The co-compost prepared from gram residue biochar mixed with maize stover at a 1:7 dry-weight ratio showed the highest rise in soil pH and CEC, giving an identical performance with the lime treatment and significantly better effect (p < .05) than the unamended control. Agglomerates of calcite and dolomite in biochar co-composts, and surface functional groups contributed to pH neutralization and increased CEC of the amended soil. The co-composts also significantly (p < .05) increased the dehydrogenase (1.87 µg TPF g-1 soil h-1), β-glucosidase (90 µg PNP g-1 soil h-1), and leucine amino peptidase (3.22 µmol MUC g-1 soil h-1) enzyme activities in the soil, thereby improving the soil's biological quality. The results of this study are encouraging for small-scale farmers in tropical developing countries to sustainably reutilize crop residues via biochar-based co-composting technology.

Conventional and Zero Tillage with Residue Management in Rice-Wheat System in the Indo-Gangetic Plains: Impact on Thermal Sensitivity of Soil Organic Carbon Respiration and Enzyme Activity

The impact of global warming on soil carbon (C) mineralization from bulk and aggregated soil in conservation agriculture (CA) is noteworthy to predict the future of C cycle. Therefore, sensitivity of soil C mineralization to temperature was studied from 18 years of a CA experiment under rice-wheat cropping system in the Indo-Gangetic Plains (IGP). The experiment comprised of three tillage systems: zero tillage (ZT), conventional tillage (CT), and strip tillage (ST), each with three levels of residue management: residue removal (NR), residue burning (RB), and residue retention (R). Cumulative carbon mineralization (C_t) in the 0-5 cm soil depth was significantly higher in CT with added residues (CT-R) and ZT with added residues (ZT-R) compared with the CT without residues (CT-NR). It resulted in higher CO₂ evolution in CT-R and ZT-R. The plots, having crop residue in both CT and ZT system, had higher (p < 0.05) Van't-Hoff factor (Q₁₀) and activation energy (Ea) than the residue burning. Notably, micro-aggregates had significantly higher Ea than bulk soil (~14%) and macro-aggregates (~40%). Aggregate-associated C content was higher in ZT compared with CT (p < 0.05). Conventional tillage with residue burning had a reduced glomalin content and β-D-glucosidase activity than that of ZT-R. The ZT-R improved the aggregate-associated C that could sustain the soil biological diversity in the long-run possibly due to higher physical, chemical, and matrix-mediated protection of SOC. Thus, it is advisable to maintain the crop residues on the soil surface in ZT condition (~CA) to cut back on valuable C from soils under IGP and similar agro-ecologies.

60 years of fertilization and liming impacts on soil organic carbon stabilization in a sub-tropical Alfisol

Limited information is available on the C stabilization mechanism of tropical soils under different management practices including long-term organic manuring, mineral fertilization alone, or in combination with lime. Hence, to understand the effect of continuous application (for 60 years) of organic manure, fertilizer, and lime alone or in combination on an acidic Alfisol, stabilization of soil organic carbon (SOC) was evaluated under maize (Zea mays L.) wheat (Triticum aestivum L.) cropping. There were eight treatments that included farmyard manure (FYM) and nitrogen (N) applied in terms of FYM, additional dose of phosphorus (P) and potassium (K) applied in terms of inorganic fertilizer (FYM + P'K'), FYM + P'K' with liming (FYM + P'K' + L) and NPK alone. These treatments were laid in a randomized block design with three replications. Results indicated that FYM + P'K' plots had maximum amount of SOC inside large macroaggregates. The value was 33 and 92% greater than only minerally fertilized (NPK) and unfertilized control plots, respectively, whereas microaggregate-associated C was highest in plots with FYM + P'K' and lime (FYM + P'K' + L), which was 48 and 183% more than unfertilized control and NPK plots, respectively. Inside soil microaggregates, plots under FYM + P'K' had highest labile C, while NPK + L plots had highest recalcitrant C. Plots with organic amendments contained higher glomalin in large macroaggregates. Plots treated with FYM + P'K' had maximum intra-aggregate particulate organic matter within microaggregates inside macroaggregates (iPOM_mM), which was 28 and 74% higher than NPK and unfertilized control plots, respectively. Total C stock inside the protected microaggregates within macroaggregates was maximum for FYM + P'K' plots. It had 38, 67, and 171% higher C stock than NPK, FYM, and unfertilized control plots, respectively. Interestingly, despite estimated C input in FYM-treated plots was much higher than NPK plots, FYM-treated plots had less C stabilization within microaggregates and within microaggregates inside macroaggregates. Microaggregates within macroaggregates accounted for ~54% of the recalcitrant C content. Thus, macroaggregates stabilization through occlusion of microaggregates was accountable for sequestration of SOC and only FYM application did not promote that mechanism compared to NPK. Carbon stabilization within macroaggregates under FYM plots was mainly governed by amorphous iron oxide.

Marker-Assisted Pyramiding of Downy Mildew-Resistant Gene Ppa3 and Black Rot-Resistant Gene Xca1bo in Popular Early Cauliflower Variety Pusa Meghna

Cauliflower is an important extensively grown cool season vegetable in India. Black rot and downy mildew are major devastating diseases reducing yield and quality of the crop. To tackle these through host plant resistance, a marker-assisted backcross breeding method was followed to pyramid a black rot-resistant gene (Xca1bo) and a downy mildew-resistant gene (Ppa3) from donors BR-161 and BR-2, respectively, into the background of Pusa Meghna cauliflower cultivar. Marker-assisted backcross breeding was followed up to BC₂ generation using SCAR marker ScOPO-04₈₃₃ and SSR marker BoGMS0624 for black rot and downy mildew resistance genes in foreground selection, respectively. In background selection, at each stage of backcrossing, 47 parental polymorphic SSR markers were used. The graphical genotyping of the five two-gene (Xca1boXca1boPpa3Ppa3) homozygous BC₂F₂ plants showed an average recovery of 85.44% of the Pusa Meghna genome with highest genome recovery of 91.7%. The genome contribution of donor parents (BR-161 and BR-2) was 8.26 with 6.34% of residual heterozygousity. The backcross derived pyramided lines BC₂F_2:3-7-16 and BC₂F_2:3-7-33 showed high resistance to both the diseases and exhibited higher yield and vitamin C content as compared with recipient parent Pusa Meghna. It is, therefore, evident from this study that resistant genes can be introgressed successfully into a Pusa Meghna cultivar without any yield penalty, benefitting farmers with reduced input cost and consumers with chemical residue free produce. Besides, the pyramided lines carrying dominant resistant genes can be exploited in a hybridization programme to develop hybrid(s) in cauliflower.

Plant Pathogenic Microbial Communication Affected by Elevated Temperature in Pectobacterium carotovorum subsp. carotovorum

Gram-negative plant pathogenic bacteria regulate specific gene expression in a population density-dependent manner by sensing level of Acyl-Homoserine Lactone (HSL) molecules which they produce and liberate to the environment, called Quorum Sensing (QS). The production of virulence factors (extracellular enzyme viz. cellulase, pectinase, etc.) in Pectobacterium carotovorum subsp. carotovorum (Pcc) is under strong regulation of QS. The QS signal molecule, N-(3-oxohexanoyl)-L-Homoserine Lactone (OHHL) was found as the central regulatory system for the virulence factor production in Pcc and is also under strict regulation of external environmental temperature. Under seven different incubation temperatures (24, 26, 28, 30, 33, 35, and 37 °C) in laboratory condition, highest amount of OHHL (804 violacein unit) and highest (79 %) Disease Severity Index (DSI) were measured at 33 °C. The OHHL production kinetics showed accumulation of highest concentration of OHHL at late log phase of the growth but diminution in the concentration occurred during stationary phase onwards to death phase. At higher temperature (35 and 37 °C) exposure, OHHL was not at detectable range. The effect of temperature on virulence factor production is the concomitant effect of HSL production and degradation which justifies less disease severity index in cross-inoculated tomato fruits incubated at 35 and 37 °C. The nondetection of the OHHL in the elevated temperature may because of degradation as these signal molecules are quite sensitive and prone to get degraded under different physical factors. This result provides the rationale behind the highest disease severity up to certain elevated temperature and leaves opportunities for investigation on mutation, co-evolution of superior plant pathogen with more stable HSL signals-mediated pathogenesis under global warming context.