Dynamic parallel imaging at 9.4 T using reconfigurable receive coaxial dipoles

Parallel imaging is one of the key MRI technologies that allow reduction of image acquisition time. However, the parallel imaging reconstruction commonly leads to a signal-to-noise ratio (SNR) drop evaluated using a so-called geometrical factor (g-factor). The g-factor is minimized by increasing the number of array elements and their spatial diversity. At the same time, increasing the element count requires a decrease in their size. This may lead to insufficient coil loading, an increase in the relative noise contribution from the RF coil itself, and hence SNR reduction. Previously, instead of increasing the channel number, we introduced the concept of electronically switchable time-varying sensitivities, which was shown to improve parallel imaging performance. In this approach, each reconfigurable receive element supports two spatially distinct sensitivity profiles. In this work, we developed and evaluated a novel eight-element human head receive-only reconfigurable coaxial dipole array for human head imaging at 9.4 T. In contrast to the previously reported reconfigurable dipole array, the new design does not include direct current (DC) control wires connected directly to the dipoles. The coaxial cable itself is used to deliver DC voltage to the PIN diodes located at the ends of the antennas. Thus, the novel reconfigurable coaxial dipole design opens a way to scale the dynamic parallel imaging up to a realistic number of channels, that is, 32 and above. The novel array was optimized and tested experimentally, including in vivo studies. It was found that dynamic sensitivity switching provided an 8% lower mean and 33% lower maximum g-factor (for Ry × Rz = 2 × 2 acceleration) compared with conventional static sensitivities.

Evaluation of coaxial dipole antennas as transceiver elements of human head array for ultra-high field MRI at 9.4T

PURPOSE

The aim of this work is to evaluate a new eight-channel transceiver (TxRx) coaxial dipole array for imaging of the human head at 9.4T developed to improve specific absorption rate (SAR) performance, and provide for a more compact and robust alternative to the state-of-the art dipole arrays.

METHODS

First, the geometry of a single coaxial element was optimized to minimize peak SAR and sensitivity to the load variation. Next, a multi-tissue voxel model was used to numerically simulate a TxRx array coil that consisted of eight coaxial dipoles with the optimal configuration. Finally, we compared the developed array to other human head dipole arrays. Results of numerical simulations were verified on a bench and in the scanner including in vivo measurements on a healthy volunteer.

RESULTS

The developed eight-element coaxial dipole TxRx array coil showed up to 1.1times higher SAR-efficiency than a similar in geometry folded-end and fractionated dipole array while maintaining whole brain coverage and low sensitivity of the resonance frequency to variation in the head size.

CONCLUSION

As a proof of concept, we developed and constructed a prototype of a 9.4T (400 MHz) human head array consisting of eight TxRx coaxial dipoles. The developed array improved SAR-efficiency and provided for a more compact and robust alternative to the folded-end dipole design. To the best of our knowledge, this is the first example of using coaxial dipoles for human head MRI at ultra-high field.

Double-row 16-element folded-end dipole transceiver array for 3D RF shimming of the whole human brain at 9.4 T

Homogeneity and longitudinal coverage of transmit (Tx) human head RF coils at ultrahigh field (UHF, ≥7 T) can be improved by 3D RF shimming, which requires using multi-row Tx arrays. Examples of 3D RF shimming using double-row UHF loop transceiver (TxRx) and Tx arrays have been described previously. Dipole antennas provide unique simplicity and robustness while offering comparable Tx efficiency and signal-to-noise ratio to conventional loop designs. Single-row Tx and TxRx human head UHF dipole arrays have been previously described by multiple groups. Recently, we developed a novel type of dipole antenna, a folded-end dipole, and presented single-row eight-element array prototypes for human head imaging at 7 and 9.4 T. These studies have shown that the novel antenna design can improve the longitudinal coverage and minimize peak local specific absorption rate (SAR) as compared with common unfolded dipoles. In this work, we developed, constructed, and evaluated a 16-element double-row TxRx folded-end dipole array for human head imaging at 9.4 T. To minimize cross-talk between neighboring dipoles located in different rows, we used transformer decoupling, which decreased coupling to a level below -20 dB. The developed array design was demonstrated to be capable of 3D static RF shimming and can be potentially used for dynamic shimming using parallel transmission. For optimal phase shifts between the rows, the array provides 11% higher SAR efficiency and 18% higher homogeneity than a folded-end dipole single-row array of the same length. The design also offers a substantially simpler and more robust alternative to the common double-row loop array with about 10% higher SAR efficiency and better longitudinal coverage.

Reconfigurable dipole receive array for dynamic parallel imaging at ultra-high magnetic field

PURPOSE

To extend the concept of 3D dynamic parallel imaging, we developed a prototype of an electronically reconfigurable dipole array that provides sensitivity alteration along the dipole length.

METHODS

We developed a radiofrequency array coil consisting of eight reconfigurable elevated-end dipole antennas. The receive sensitivity profile of each dipole can be electronically shifted toward one or the other end by electrical shortening or lengthening the dipole arms using positive-intrinsic-negative-diode lump-element switching units. Based on the results of electromagnetic simulations, we built the prototype and tested it at 9.4 T on phantom and healthy volunteer. A modified 3D SENSE reconstruction was used, and geometry factor (g-factor) calculations were performed to assess the new array coil.

RESULTS

Electromagnetic simulations showed that the new array coil was capable of alteration of its receive sensitivity profile along the dipole length. Electromagnetic and g-factor simulations showed closely agreeing predictions when compared to the measurements. The new dynamically reconfigurable dipole array provided significant improvement in geometry factor compared to static dipoles. We obtained up to 220% improvement for 3 × 2 (R_y × R_z ) acceleration compared to the static configuration case in terms of maximum g-factor and up to 54% in terms of mean g-factor for the same acceleration.

CONCLUSION

We presented an 8-element prototype of a novel electronically reconfigurable dipole receive array that permits rapid sensitivity modulations along the dipole axes. Applying dynamic sensitivity modulation during image acquisition emulates two virtual rows of receive elements along the z-direction, and therefore improves parallel imaging performance for 3D acquisitions.

Deuterium metabolic imaging of the human brain in vivo at 7 T

PURPOSE

To explore the potential of deuterium metabolic imaging (DMI) in the human brain in vivo at 7 T, using a multi-element deuterium (2 H) RF coil for 3D volume coverage.

METHODS

1 H-MR images and localized 2 H MR spectra were acquired in vivo in the human brain of 3 healthy subjects to generate DMI maps of 2 H-labeled water, glucose, and glutamate/glutamine (Glx). In addition, non-localized 2 H-MR spectra were acquired both in vivo and in vitro to determine T1 and T2 relaxation times of deuterated metabolites at 7 T. The performance of the 2 H coil was assessed through numeric simulations and experimentally acquired B1 + maps.

RESULTS

3D DMI maps covering the entire human brain in vivo were obtained from well-resolved deuterated (2 H) metabolite resonances of water, glucose, and Glx. The T1 and T2 relaxation times were consistent with those reported at adjacent field strengths. Experimental B1 + maps were in good agreement with simulations, indicating efficient and homogeneous B1 + transmission and low RF power deposition for 2 H, consistent with a similar array coil design reported at 9.4 T.

CONCLUSION

Here, we have demonstrated the successful implementation of 3D DMI in the human brain in vivo at 7 T. The spatial and temporal nominal resolutions achieved at 7 T (i.e., 2.7 mL in 28 min, respectively) were close to those achieved at 9.4 T and greatly outperformed DMI at lower magnetic fields. DMI at 7 T and beyond has clear potential in applications dealing with small brain lesions.

Double-row dipole/loop combined array for human whole brain imaging at 7 T

Important issues in designing radiofrequency (RF) coils for human head imaging at ultra-high field (UHF; ≥7 T) are the inhomogeneity and longitudinal coverage (along the magnet axis) of the transmit (Tx) RF field. Both the homogeneity and coverage produced by Tx volume coils can be improved by means of three-dimensional (3D) RF shimming, which requires the use of multirow Tx-arrays. In addition, according to recent findings of the ultimate intrinsic signal-to-noise ratio (UISNR) theory, the loop-only receive (Rx) arrays do not provide optimal SNR near the brain center at UHF. The latter can be obtained by combining complementary conductive structures carrying different current patterns (e.g., loops and dipole antennas). In this work, we developed, constructed, and evaluated a novel 32-element hybrid array design for human head imaging at 7 T. The array consists of 16 transceiver loops placed in two rows circumscribing the head and 16 folded-end Rx-only dipoles positioned in the centers of loops. By placing all elements in a single layer, we increased RF power deposition into the tissue and, thus, preserved the Tx-efficiency. Using this hybrid design also simplifies the coil structure by minimizing the total number of array elements. The array demonstrated whole brain coverage, 3D RF shimming capability, and high SNR. It provided ~15% higher SNR near the brain center and, depending on the RF shim mode, from 20% to 40% higher Tx-efficiency than a common commercial head array coil.

A 32-element loop/dipole hybrid array for human head imaging at 7 T

PURPOSE

To improve whole-brain SNR at 7 Tesla, a novel 32-element hybrid human head array coil was developed, constructed, and tested.

METHODS

Our general design strategy is based on 2 major ideas: Firstly, following suggestions of previous works based on the ultimate intrinsic SNR theory, we combined loops and dipoles for improvement of SNR near the head center. Secondly, we minimized the total number of array elements by using a hybrid combination of transceive (TxRx) and receive (Rx) elements. The new hybrid array consisted of 8 folded-end TxRx-dipole antennas and 3 rows of 24 Rx-loops all placed in a single layer on the surface of a tight-fit helmet.

RESULTS

The developed array significantly improved SNR in vivo both near the center (∼20%) and at the periphery (∼20% to 80%) in comparison to a common commercial array coil with 8 transmit (Tx) and 32 Rx-elements. Whereas 24 loops alone delivered central SNR very similar to that of the commercial coil, the addition of complementary dipole structures provided further improvement. The new array also provided ∼15% higher Tx efficiency and better longitudinal coverage than that of the commercial array.

CONCLUSION

The developed array coil demonstrated advantages in combining complementary TxRx and Rx resonant structures, that is, TxRx-dipoles and Rx-loops all placed in a single layer at the same distance to the head. This strategy improved both SNR and Tx-performance, as well as simplified the total head coil design, making it more robust.

9.4 T double-tuned 13 C/1 H human head array using a combination of surface loops and dipole antennas

MRI at ultra-high field (UHF, ≥7 T) provides a natural strategy for improving the quality of X-nucleus magnetic resonance spectroscopy and imaging due to the intrinsic benefit of increased signal-to-noise ratio. Considering that RF coils require both local transmission and reception at UHF, the designs of double-tuned coils, which often consist of several layers of transmit and receive resonant elements, become quite complex. A few years ago, a new type of RF coil, ie a dipole antenna, was developed and used for human body and head imaging at UHF. Due to the mechanical and electrical simplicity of dipole antennas, combining an X-nucleus surface loop array with ¹ H dipoles can substantially simplify the design of a double-tuned UHF human head array coil. Recently, we developed a novel bent folded-end dipole transceiver array for human head imaging at 9.4 T. The new eight-element dipole array demonstrated full brain coverage, and transmit efficiency comparable to that of the substantially more complex 16-element surface loop array. In this work, we developed, constructed and evaluated a double-tuned ¹³ C/¹ H human head 9.4 T array consisting of eight ¹³ C transceiver surface loops and eight ¹ H transceiver bent folded-end dipole antennas all placed in a single layer. We showed that interaction between loops and dipoles can be minimized by placing four ¹ H traps into each ¹³ C loop. The presented double-tuned RF array coil substantially simplifies the design as compared with the common double-tuned surface loop arrays. At the same time, the coil demonstrated an improved ¹ H longitudinal coverage and good transmit efficiency.

Relaxation-corrected macromolecular model enables determination of 1 H longitudinal T1 -relaxation times and concentrations of human brain metabolites at 9.4T

PURPOSE

Ultrahigh field MRS has improved characterization of the neurochemical profile. To compare results obtained at 9.4T to those from lower field strengths, it is of interest to quantify the concentrations of metabolites measured. Thus, measuring T₁ -relaxation times is necessary to correct for T₁ -weighting that occurs in acquisitions for single-voxel spectroscopy and spectroscopic imaging. A macromolecule (MM) simulation model was developed to fit MM contributions to the short TE inversion series used to measure T₁ -relaxation times.

METHODS

An inversion series with seven time points was acquired with metabolite-cycled STEAM to estimate T₁ -relaxation times of metabolites. A short TE was employed in this study to retain signals from metabolites with short T₂ -relaxation times and J-couplings. The underlying macromolecule spectrum was corrected by developing a sequence-specific, relaxation-corrected simulated MM model. Quantification of metabolite peaks was performed using internal water referencing and relaxation corrections.

RESULTS

T₁ -relaxation times for metabolites range from approximately 750 to approximately 2000 ms and approximately 1000 to approximately 2400 ms in gray matter (GM)- and white matter (WM)- rich voxels, respectively. Quantification of metabolites was compared between GM and WM voxels, as well as between results that used a simulated MM spectrum against those that used an experimentally acquired MM spectrum. Metabolite concentrations are reported in mmol/kg quantities.

CONCLUSION

T₁ -relaxation times are reported for nonsinglet resonances for the first time at 9.4T by use of a MM simulation model to account for contributions from the MM spectrum. In addition to T₁ -relaxation times, quantification results of metabolites from GM- and WM-rich voxels are reported.

Folded-end dipole transceiver array for human whole-brain imaging at 7 T

The advancement of clinical applications of ultrahigh field (UHF) MRI depends heavily on advances in technology, including the development of new radiofrequency (RF) coil designs. Currently, the number of commercially available 7 T head RF coils is rather limited, implying a need to develop novel RF head coil designs that offer superior transmit and receive performance. RF coils to be used for clinical applications must be robust and reliable. In particular, for transmit arrays, if a transmit channel fails the local specific absorption rate may increase, significantly increasing local tissue heating. Recently, dipole antennas have been proposed and used to design UHF head transmit and receive arrays. The dipole provides a unique simplicity while offering comparable transmit efficiency and signal-to-noise ratio with the conventional loop design. Recently, we developed a novel array design in our laboratory using a folded-end dipole antenna. In this work, we developed, constructed and evaluated an eight-element transceiver bent folded-end dipole array for human head imaging at 7 T. Driven in the quadrature circularly polarized mode, the array demonstrated more than 20% higher transmit efficiency and significantly better whole-brain coverage than that provided by a widely used commercial array. In addition, we evaluated passive dipole antennas for decoupling the proposed array. We demonstrated that in contrast to the common unfolded dipole array, the passive dipoles moved away from the sample not only minimize coupling between the adjacent folded-end active dipoles but also produce practically no destructive interference with the quadrature mode of the array.

Open birdcage coil for head imaging at 7T

PURPOSE

To theoretically describe, design, and test the new geometry of the birdcage coil for 7 Tesla anatomical brain imaging, which includes a large window on top, without deliberately jeopardizing its homogeneity and efficiency. This opencage will not only improve patient comfort but also enable the volunteer to follow functional MRI stimuli. This design could also facilitate the tracking of patient compliance and enable better correction of the movement.

METHODS

Via the transfer matrix approach, a birdcage-like coil with a nonperiodic distribution of rungs is constructed with optimized currents in the coil rungs. Subsequently, the coil is adjusted in full-wave simulations. Then, the coil is assembled, fine-tuned, and matched on the bench. Finally, these results are confirmed experimentally on a phantom and in vivo.

RESULTS

Indeed, the computed isolation of -14.9 dB between the feeding ports of the coil and the symmetry of the circular polarized mode pattern transmit RF magnetic field ( B 1 + ) showed that the coil was properly optimized. An experimental assessment of the developed coil showed competitive transmit efficiency and coverage compared with the conventional birdcage coil of similar size.

CONCLUSION

The proposed opencage coil can be designed and work without a dramatic drop of performance in terms of the B 1 + field homogeneity, transmit efficiency ( B 1 + / P ref ), peak local specific absorption rate ( S A R 10 g ) and SAR efficiency ( B 1 + / S A R 10 g ).

Unshielded bent folded-end dipole 9.4 T human head transceiver array decoupled using modified passive dipoles

PURPOSE

To develop an unshielded dipole transceiver array for human head imaging at 9.4 Tesla and to improve decoupling of adjacent dipole elements, a novel array design with modified passive dipole antennas was developed, evaluated, and tested.

METHODS

The new array consisted of 8 bent folded-end dipole elements placed in a single row and surrounding the head. Adjacent elements of RF transceiver arrays are usually decoupled by introducing circuits electrically connected to elements. These methods are difficult to use for dipole arrays because of the distant location of the adjacent antennas. A recently developed decoupling technique using passive dipoles is simple and does not require any electrical connection. However, common parallel passive dipoles can produce destructive interference with the RF field of the array itself. To minimize this interference, we placed the passive dipoles perpendicularly to the active dipoles and positioned them at the ends of the array. We also evaluated the effect of different passive dipoles on the array transmit performance. Finally, we optimized the array transmit performance by varying the length of the dipole folded portion.

RESULTS

By rotating the passive dipoles 90º and moving them toward the ends of the array, we minimized the destructive interference to an acceptable level without compromising decoupling and the transmit efficiency.

CONCLUSION

While keeping the benefits of the passive dipole decoupling method, the new modified dipoles produce substantially less destructive interference with the RF field of the array than the common design. The constructed transceiver array demonstrated good decoupling and whole-brain coverage.

Electromagnetic simulation of a 16-channel head transceiver at 7 T using circuit-spatial optimization

PURPOSE

With increased interest in parallel transmission in ultrahigh-field MRI, methods are needed to correctly calculate the S-parameters and complex field maps of the parallel transmission coil. We present S-parameters paired with spatial field optimization to fully simulate a double-row 16-element transceiver array for brain MRI at 7 T.

METHODS

We implemented a closed-form equation of the coil S-parameters and overall spatial B 1 + field. We minimized a cost function, consisting of coil S-parameters and the B 1 + homogeneity in brain tissue, by optimizing transceiver components, including matching, decoupling circuits, and lumped capacitors. With this, we are able to compare the in silico results determined with and without B 1 + homogeneity weighting. Using the known voltage range from the host console, we reconstructed the B 1 + maps of the array and performed RF shimming with four realistic head models.

RESULTS

As performed with B 1 + homogeneity weighting, the optimized coil circuit components were highly consistent over the four heads, producing well-tuned, matched, and decoupled coils. The mean peak forward powers and B 1 + statistics for the head models are consistent with in vivo human results (N = 8). There are systematic differences in the transceiver components as optimized with or without B 1 + homogeneity weighting, resulting in an improvement of 28.4 ± 7.5% in B 1 + homogeneity with a small 1.9 ± 1.5% decline in power efficiency.

CONCLUSION

This co-simulation methodology accurately simulates the transceiver, predicting consistent S-parameters, component values, and B 1 + field. The RF shimming of the calculated field maps match the in vivo performance.

Decoupling of folded-end dipole antenna elements of a 9.4 T human head array using an RF shield

Dipole antennas have recently been introduced to the field of MRI and successfully used, mostly as elements of ultra-high field (UHF, ≥ 7 T) human body arrays. Usage of dipole antennas for UHF human head transmit (Tx) arrays is still under development. Due to the substantially smaller size of the sample, dipoles must be made significantly shorter than in the body array. Additionally, head Tx arrays are commonly placed on the surface of rigid helmets made sufficiently large to accommodate tight-fit receive arrays. As a result, dipoles are not well loaded and are often poorly decoupled, which compromises Tx efficiency. Commonly, adjacent array elements are decoupled by circuits electrically connected to them. Placement of such circuits between distantly located dipoles is difficult. Alternatively, decoupling is provided by placing passive antennas between adjacent dipole elements. This method only works when these additional components are sufficiently small (compared with the size of active dipoles). Otherwise, RF fields produced by passive elements interfere destructively with the RF field of the array itself, and previously reported designs have used passive dipoles of about the size of array dipoles. In this work, we developed a novel method of decoupling for adjacent dipole antennas, and used this technique while constructing a 9.4 T human head eight-element transceiver array. Decoupling is provided without any additional circuits by simply folding the dipoles and using an RF shield located close to the folded portion of the dipoles. The array reported in this work demonstrates good decoupling and whole-brain coverage.

Decoupling of folded-end dipole antenna elements of a 9.4 T human head array using an RF shield

Dipole antennas have recently been introduced to the field of MRI and successfully used, mostly as elements of ultra-high field (UHF, ≥ 7 T) human body arrays. Usage of dipole antennas for UHF human head transmit (Tx) arrays is still under development. Due to the substantially smaller size of the sample, dipoles must be made significantly shorter than in the body array. Additionally, head Tx arrays are commonly placed on the surface of rigid helmets made sufficiently large to accommodate tight-fit receive arrays. As a result, dipoles are not well loaded and are often poorly decoupled, which compromises Tx efficiency. Commonly, adjacent array elements are decoupled by circuits electrically connected to them. Placement of such circuits between distantly located dipoles is difficult. Alternatively, decoupling is provided by placing passive antennas between adjacent dipole elements. This method only works when these additional components are sufficiently small (compared with the size of active dipoles). Otherwise, RF fields produced by passive elements interfere destructively with the RF field of the array itself, and previously reported designs have used passive dipoles of about the size of array dipoles. In this work, we developed a novel method of decoupling for adjacent dipole antennas, and used this technique while constructing a 9.4 T human head eight-element transceiver array. Decoupling is provided without any additional circuits by simply folding the dipoles and using an RF shield located close to the folded portion of the dipoles. The array reported in this work demonstrates good decoupling and whole-brain coverage.

A novel method to measure T1 -relaxation times of macromolecules and quantification of the macromolecular resonances

PURPOSE

Macromolecular peaks underlying metabolite spectra influence the quantification of metabolites. Therefore, it is important to understand the extent of contribution from macromolecules (MMs) in metabolite quantification. However, to model MMs more accurately in spectral fitting, differences in T₁ relaxation times among individual MM peaks must be considered. Characterization of T₁ -relaxation times for all individual MM peaks using a single inversion recovery technique is difficult due to eventual contributions from metabolites. On the contrary, a double inversion recovery (DIR) technique provided flexibility to acquire MM spectra spanning a range of longitudinal magnetizations with minimal metabolite influence. Thus, a novel method to determine T₁ -relaxation times of individual MM peaks is reported in this work.

METHODS

Extensive Bloch simulations were performed to determine inversion time combinations for a DIR technique that yielded adequate MM signal with varying longitudinal magnetizations while minimizing metabolite contributions. MM spectra were acquired using DIR-metabolite-cycled semi-LASER sequence. LCModel concentrations were fitted to the DIR signal equation to calculate T₁ -relaxation times.

RESULTS

T₁ -relaxation times of MMs range from 204 to 510 ms and 253 to 564 ms in gray- and white-matter rich voxels respectively at 9.4T. Additionally, concentrations of 13 MM peaks are reported.

CONCLUSION

A novel DIR method is reported in this work to calculate T₁ -relaxation times of MMs in the human brain. T₁ -relaxation times and relaxation time corrected concentrations of individual MMs are reported in gray- and white-matter rich voxels for the first time at 9.4T.

Ultrahigh-resolution quantitative spinal cord MRI at 9.4T

PURPOSE

To present the results of the first human spinal cord in vivo MRI scans at 9.4T.

METHODS

A human brain coil was used to image the human spinal cord at 9.4T. All anatomical images were acquired with a T₂ *-weighted gradient-echo sequence. A comparison of the influence of four different B₀ shimming routines on the image quality was performed. Intrinsic signal-to-noise-ratio maps were determined using a pseudo-multiple replica approach. Measurements with different echo times were compared and processed to one multiecho data image combination image. Based on the multiecho acquisitions, T₂ *-relaxation time maps were calculated. Algorithmic spinal cord detection and gray matter/white matter segmentation were tested.

RESULTS

An echo time between 9 and 13.8 ms compromised best between gray matter/white matter contrast and image quality. A maximum in-plane resolution of 0.15 × 0.15 mm² was achieved for anatomical images. These images offered excellent image quality and made small structures of the spinal cord visible. The scanner vendor implemented B₀ shimming routine performed best during this work. Intrinsic signal-to-noise-ratio values of between 6600 and 8060 at the upper cervical spinal cord were achieved. Detection and segmentation worked reliably. An average T₂ *-time of 24.88 ms ± 6.68 ms for gray matter and 19.37 ms ± 8.66 ms for white matter was calculated.

CONCLUSION

The proposed human brain coil can be used to image the spinal cord. The maximum in-plane resolution in this work was higher compared with the 7T results from the literature. The 9.4T acquisitions made the small structures of the spinal cord clearly visible.

Double-row 18-loop transceive-32-loop receive tight-fit array provides for whole-brain coverage, high transmit performance, and SNR improvement near the brain center at 9.4T

PURPOSE

To improve the transmit (Tx) and receive (Rx) performance of a human head array and provide whole-brain coverage at 9.4T, a novel 32-element array design was developed, constructed, and tested.

METHODS

The array consists of 18 transceiver (TxRx) surface loops and 14 Rx-only vertical loops all placed in a single layer. The new design combines benefits of both TxRx and transmit-only-receive-only (ToRo) designs. The general idea of the design is that the total number of array elements (both TxRx and Rx) should not exceed the number of required Rx elements. First, the necessary number of TxRx loops is placed around the object tightly to optimize the Tx performance. The rest of the elements are loops, which are used only for reception. We also compared the performance of the new array with that of a state-of-the-art ToRo array consisting of 16 Tx-only loops and 31 Rx-only loops.

RESULTS

The new array provides whole-brain coverage, ~1.5 times greater Tx efficiency and 1.3 times higher SNR near the brain center as compared to the ToRo array, while the latter delivers higher (up to 1.5 times) peripheral SNR.

CONCLUSION

In general, the new approach of constructing a single-layer array consisting of both TxRx- and Rx-only elements simplifies the array construction by minimizing the total number of elements and makes the entire design more robust and, therefore, safe. Overall, our work provides a recipe for a Tx- and Rx-efficient head array coil suitable for parallel transmission and reception as well as whole-brain imaging at UHF.

Decoupling of a double-row 16-element tight-fit transceiver phased array for human whole-brain imaging at 9.4 T

One of the major challenges in constructing multi-channel and multi-row transmit (Tx) or transceiver (TxRx) arrays is the decoupling of the array's loop elements. Overlapping of the surface loops allows the decoupling of adjacent elements and also helps to improve the radiofrequency field profile by increasing the penetration depth and eliminating voids between the loops. This also simplifies the design by reducing the number of decoupling circuits. At the same time, overlapping may compromise decoupling by generating high resistive (electric) coupling near the overlap, which cannot be compensated for by common decoupling techniques. Previously, based on analytical modeling, we demonstrated that electric coupling has strong frequency and loading dependence, and, at 9.4 T, both the magnetic and electric coupling between two heavily loaded loops can be compensated at the same time simply by overlapping the loops. As a result, excellent decoupling was obtained between adjacent loops of an eight-loop single-row (1 × 8) human head tight-fit TxRx array. In this work, we designed and constructed a 9.4-T (400-MHz) 16-loop double-row (2 × 8) overlapped TxRx head array based on the results of the analytical and numerical electromagnetic modeling. We demonstrated that, simply by the optimal overlap of array loops, a very good decoupling can be obtained without additional decoupling strategies. The constructed TxRx array provides whole-brain coverage and approximately 1.5 times greater Tx efficiency relative to a transmit-only/receive-only (ToRo) array, which consists of a larger Tx-only array and a nested tight-fit 31-loop receive (Rx)-only array. At the same time, the ToRo array provides greater peripheral signal-to-noise ratio (SNR) and better Rx parallel performance in the head-feet direction. Overall, our work provides a recipe for a simple, robust and very Tx-efficient design suitable for parallel transmission and whole-brain imaging at ultra-high fields.

Combination of surface and 'vertical' loop elements improves receive performance of a human head transceiver array at 9.4 T

Ultra-high-field (UHF, ≥7 T) human magnetic resonance imaging (MRI) provides undisputed advantages over low-field MRI (≤3 T), but its development remains challenging because of numerous technical issues, including the low efficiency of transmit (Tx) radiofrequency (RF) coils caused by the increase in tissue power deposition with frequency. Tight-fit human head transceiver (TxRx) arrays improve Tx efficiency in comparison with Tx-only arrays, which are larger in order to fit multi-channel receive (Rx)-only arrays inside. A drawback of the TxRx design is that the number of elements in an array is limited by the number of available high-power RF Tx channels (commonly 8 or 16), which is not sufficient for optimal Rx performance. In this work, as a proof of concept, we developed a method for increasing the number of Rx elements in a human head TxRx surface loop array without the need to move the loops away from a sample, which compromises the array Tx performance. We designed and constructed a prototype 16-channel tight-fit array, which consists of eight TxRx surface loops placed on a cylindrical holder circumscribing a head, and eight Rx-only vertical loops positioned along the central axis (parallel to the magnetic field B₀ ) of each TxRx loop, perpendicular to its surface. We demonstrated both experimentally and numerically that the addition of the vertical loops has no measurable effect on the Tx efficiency of the array. An increase in the maximum local specific absorption rate (SAR), evaluated using two human head voxel models (Duke and Ella), measured 3.4% or less. At the same time, the 16-element array provided 30% improvement of central signal-to-noise ratio (SNR) in vivo relative to a surface loop eight-element array. The novel array design also demonstrated an improvement in the parallel Rx performance in the transversal plane. Thus, using this method, both the Rx and Tx performance of the human head array can be optimized simultaneously.

Evaluation of transmit efficiency and SAR for a tight fit transceiver human head phased array at 9.4 T

Ultra-high field (UHF, ≥7 T) tight fit transceiver phased arrays improve transmit (Tx) efficiency (B₁⁺ /√P) in comparison with Tx-only arrays, which are usually larger to fit receive (Rx)-only arrays inside. One of the major problems limiting applications of tight fit arrays at UHFs is the anticipated increase of local tissue heating, which is commonly evaluated by the local specific absorption rate (SAR). To investigate the tradeoff between Tx efficiency and SAR when a tight fit UHF human head transceiver phased array is used instead of a Tx-only/Rx-only RF system, a single-row eight-element prototype of a 400 MHz transceiver head phased array was constructed. The Tx efficiency and SAR of the array were evaluated and compared with that of a larger Tx-only array, which could also be used in combination with an 18-channel Rx-only array. Data were acquired on the Siemens Magnetom whole body 9.4 T human MRI system. Depending on the head size, positioning and the RF shim strategy, the smaller array provides from 11 to 23% higher Tx efficiency. In general, the Tx performance, evaluated as B₁⁺ /√SAR, i.e. the safety excitation efficiency (SEE), is also not compromised. The two arrays provide very similar SEEs evaluated over 1000 random RF shim sets. We demonstrated that, in general, the tight fit transceiver array improves Tx performance without compromising SEE. However, in specific cases, the SEE value may vary, favoring one of the arrays, and therefore must be carefully evaluated.

Resonant inductive decoupling (RID) for transceiver arrays to compensate for both reactive and resistive components of the mutual impedance

Transceiver surface coil arrays improve transmit performance (B1/√kW) and B1 homogeneity for head imaging up to 9.4 T. To further improve reception performance and parallel imaging, the number of array elements must be increased with a corresponding decrease in their size. With a large number of small interacting antennas, decoupling is one of the most challenging aspects in the design and construction of transceiver arrays. Previously described decoupling techniques using geometric overlap, inductive or capacitive decoupling have focused on the elimination of the reactance of the mutual impedance only, which can limit the obtainable decoupling to -10 dB as a result of residual mutual resistance. A novel resonant inductive decoupling (RID) method, which allows compensation for both reactive and resistive components of the mutual impedance between the adjacent surface coils, has been developed and verified experimentally. This method provides an easy way to adjust the decoupling remotely by changing the resonance frequency of the RID circuit through the adjustment of a variable capacitor. As an example, a single-row (1 × 16) 7-T transceiver head array of n = 16 small overlapped surface coils using RID decoupling between adjacent coils was built. In combination with overlapped coils, the RID technique achieved better than -24 dB of decoupling for all adjacent coils.

Selective homonuclear polarization transfer for spectroscopic imaging of GABA at 7T

We develop and implement a selective homonuclear polarization transfer method for the detection of 3.0 ppm C-4 GABA resonance by spectroscopic imaging in the human brain at 7T. This single shot method is demonstrated with simulations and phantoms, which achieves comparable efficiency of detection to that of J-difference editing. The macromolecule resonance that commonly co-edits with GABA is suppressed at 7T through use of a narrow band preacquisition suppression pulse. This technique is implemented in humans with an eight channel transceiver array and high degree B(0) shimming to measure supplementary motor area and thalamic GABA in controls (n = 8) and epilepsy patients (n = 8 total). We find that the GABA/N-acetyl aspartate ratio in the thalamus of control volunteers, well controlled and poorly controlled epilepsy patients are 0.053 ± 0.012 (n = 8), 0.090 ± 0.012 (n = 2), and 0.038 ± 0.009 (n = 6), respectively.

Transceiver-Phased Arrays for Human Brain Studies at 7 T

The paper describes technological advances in high-field (7 T) transceiver-phased arrays developed for magnetic resonance imaging of the human brain. The first part of this work describes an 8-element inductively decoupled split elliptical transceiver-phased array with selectable geometry, which provides an easy and efficient way of compensating for changes in mutual inductive coupling associated with difference in loading due to variability in head shape and size. The second part of the work describes a double-row 16-element (2 × 8) transceiver array to extend the homogeneous transmit B1 profile in the longitudinal direction. Multiplexing eight transmit channels between the two rows of the array provides homogeneous excitation over the entire volume. The final section describes design and construction of a double-tuned 31P/1H 16-element (8 at each frequency) array. The array improves transmission efficiency and B1 homogeneity at 1H frequency in comparison with 31P/1H quadrature transverse electromagnetic volume coil. For 31P studies, the array also improves transmission efficiency (38%), signal-to-noise ratio (SNR) for central brain locations (20%) and provides substantially greater SNR (up to 400%) for peripheral locations.

Improved homogeneity of the transmit field by simultaneous transmission with phased array and volume coil

PURPOSE

To improve the homogeneity of transmit volume coils at high magnetic fields (> or =4 T). Due to radiofrequency (RF) field/tissue interactions at high fields, 4 T to 8 T, the transmit profile from head-sized volume coils shows a distinctive pattern with relatively strong RF magnetic field B(1) in the center of the brain.

MATERIALS AND METHODS

In contrast to conventional volume coils at high field strengths, surface coil phased arrays can provide increased RF field strength peripherally. In theory, simultaneous transmission from these two devices could produce a more homogeneous transmission field. To minimize interactions between the phased array and the volume coil, counter rotating current (CRC) surface coils consisting of two parallel rings carrying opposite currents were used for the phased array.

RESULTS

Numerical simulations and experimental data demonstrate that substantial improvements in transmit field homogeneity can be obtained.

CONCLUSION

We have demonstrated the feasibility of using simultaneous transmission with human head-sized volume coils and CRC phased arrays to improve homogeneity of the transmit RF B(1) field for high-field MRI systems.

RF shimming for spectroscopic localization in the human brain at 7 T

Spectroscopic imaging of the human head at short echo times (<or=15 ms) typically requires suppression of signals from extracerebral tissues. However, at 7 T, decreasing efficiency in B1+ generation (hertz/watt) and increasing spectral bandwidth result in dramatic increases in power deposition and increased chemical shift registration artifacts for conventional gradient-based in-plane localization. In this work, we describe a novel method using radiofrequency shimming and an eight-element transceiver array to generate a B1+ field distribution that excites a ring about the periphery of the head and leaves central brain regions largely unaffected. We have used this novel B1+ distribution to provide in-plane outer volume suppression (>98% suppression of extracerebral lipids) without the use of gradients. This novel B1+ distribution is used in conjunction with a double inversion recovery method to provide suppression of extracerebral resonances with T1s greater than 400 ms, while having negligible effect on metabolite ratios of cerebral resonances with T1s>1000 ms. Despite the use of two adiabatic pulses, the high efficiency of the ring distribution allows radiofrequency power deposition to be limited to 3-4 W for a pulse repetition time of 1.5 sec. The short echo time enabled the acquisition of images of the human brain, displaying glutamate, glutamine, macromolecules, and other major cerebral metabolites.

High-field head radiofrequency volume coils using transverse electromagnetic (TEM) and phased array technologies

This article describes technological advances in quadrature transverse electromagnetic (TEM) volume coils and phased arrays reported recently from our laboratory developed for MRI and MRS imaging of the human brain. The first part of this work presents a new method for tuning TEM volume coils based on measurements of the radiofrequency current distribution in the coil elements. This technique facilitates bench adjustment of the coils' homogeneity and is particularly important for tuning double-tuned TEM volume coils. We have also used this method to optimize other TEM configurations such as a quadrature TEM half-volume coil and a split TEM coil. TEM half-volume coils provide greater sensitivity over localized regions than conventional full-volume coils, and the split TEM coil provides greater patient access and ease of use. The second part of this work describes the development of single-tuned and double-tuned transmit TEM volume coils in combination with phased arrays. A variety of different techniques for active detuning of single-tuned and double-tuned TEM volume coils are presented along with the development of phased arrays and transmission line preamplifier decoupling. The final section describes the use of counter rotating current (CRC) surface coils in phased arrays. Because of the intrinsic isolation of CRC coils from transmit volume coils, CRC arrays can be used simultaneously with volume coils for both reception and transmission. Near the center of the human head where both the phased array and the volume coil produce similar sensitivities, simultaneous reception enhances the signal-to-noise ratio. Conversely, simultaneous transmission can be used to boost the transmit field in peripheral brain regions from the volume coil to provide a more homogeneous transmit field.

Short echo spectroscopic imaging of the human brain at 7T using transceiver arrays

Recent advances in magnet technology have enabled the construction of ultrahigh-field magnets (7T and higher) that can accommodate the human head and body. Despite the intrinsic advantages of performing spectroscopic imaging at 7T, increased signal-to-noise ratio (SNR), and spectral resolution, few studies have been reported to date. This limitation is largely due to increased power deposition and B(1) inhomogeneity. To overcome these limitations, we used an 8-channel transceiver array with a short TE (15 ms) spectroscopic imaging sequence. Utilizing phase and amplitude mapping and optimization schemes, the 8-element transceiver array provided both improved efficiency (17% less power for equivalent peak B(1)) and homogeneity (SD(B(1)) = +/-10% versus +/-22%) in comparison to a transverse electromagnetic (TEM) volume coil. To minimize the echo time to measure J-modulating compounds such as glutamate, we developed a short TE sequence utilizing a single-slice selective excitation pulse followed by a broadband semiselective refocusing pulse. Extracerebral lipid resonances were suppressed with an inversion recovery pulse and delay. The short TE sequence enabled visualization of a variety of resonances, including glutamate, in both a control subject and a patient with a Grade II oligodendroglioma.

7T head volume coils: improvements for rostral brain imaging

PURPOSE

To improve the performance of 7T head coils over the rostral head regions. Due to radiofrequency (RF) field/tissue interactions, the RF magnetic field profile produced by 7T volume head coils is very inhomogeneous, with enhanced sensitivity near the center of the human brain and substantially reduced in the periphery.

MATERIALS AND METHODS

Two head-sized quadrature volume coils of similar diameters but substantially different lengths (17 and 10 cm) were constructed and tested using a 7T Varian Inova system.

RESULTS

Experimental data demonstrated that by using a shorter volume head-sized coil or simply by partially moving a head out of the coil, coil efficiency near the top of a head can be improved by 20%. The homogeneity also improved, largely resulting from an increase in peripheral B(1) values. This resulted in 10%-20% variation in axial slices located near the top of a head.

CONCLUSION

We have demonstrated a less deeply positioned head or substantially shorter volume coil can significantly improve coil performance and homogeneity for the rostral head at ultrahigh magnetic fields (7T and above). For studies that target superior brain regions, this coil arrangement can be highly effective.

4T split TEM volume head and knee coils for improved sensitivity and patient accessibility

Split RF coils offer improved patient access by eliminating the need for the coil to be slid over the region of interest. For unshielded birdcage coils, the presence of end ring currents necessitates a direct electrical connection between two halves of the coil. For high-field (>3T) shielded birdcage coils, both the shield and the coil must be split and reliably connected electrically. This problem can be circumvented by the use of split TEM volume coils. Since the elements of a TEM coil are coupled inductively, no direct electrical connection between the halves is necessary. In this work we demonstrate that the effects of splitting the shield for head and knee TEMs can be compensated for, and performance retained. For the knee, the improved access allowed the coil diameter to be reduced, enhancing the sensitivity by 15-20%.

4 T Actively detuneable double-tuned 1H/31P head volume coil and four-channel 31P phased array for human brain spectroscopy

Typically 31P in vivo magnetic resonance spectroscopic studies are limited by SNR considerations. Although phased arrays can improve the SNR; to date 31P phased arrays for high-field systems have not been combined with 31P volume transmit coils. Additionally, to provide anatomical reference for the 31P studies, without removal of the coil or patient from the magnet, double-tuning (31P/1H) of the volume coil is required. In this work we describe a series of methods for active detuning and decoupling enabling use of phased arrays with double-tuned volume coils. To demonstrate these principles we have built and characterized an actively detuneable 31P/1H TEM volume transmit/four-channel 31P phased array for 4 T magnetic resonance spectroscopic imaging (MRSI) of the human brain. The coil can be used either in volume-transmit/array-receive mode or in TEM transmit/receive mode with the array detuned. Threefold SNR improvement was obtained at the periphery of the brain using the phased array as compared to the volume coil.

High-field actively detuneable transverse electromagnetic (TEM) coil with low-bias voltage for high-power RF transmission

The design and construction of a 4T (170 MHz) transverse electromagnetic (TEM) actively detuneable quadrature head coil is described. Conventional schemes for active detuning require high negative bias voltages (>300 V) to prevent leakage of RF pulses with amplitudes of 1-2 kW. To extend the power handling capacity and avoid the use of high DC bias voltages, we developed an alternate method of detuning the volume coil. In this method the PIN diodes in the detuning circuits are shorted when the RF volume coil is tuned, and negatively biased with -12 V when the coil is detuned. To preserve the high Q(U)/Q(L) ratio of the TEM coil, we modified the method of Nabetani and Watkins (Proceedings of the 13th Annual Meeting of ISMRM, Kyoto, Japan, 2004, abstract 1574) by utilizing a high-impedance (approximately 200 Omega), lumped-element, quarter-wavelength transformer. A Q(U) of 500 was achieved for the detuneable TEM, such that incorporation of the detuning network had minimal effect (<1 dB) on the performance of the coil in vivo.

SENSE imaging with a quadrature half-volume transverse electromagnetic (TEM) coil at 4T

PURPOSE

To demonstrate the feasibility of high-field SENSE imaging of large objects, such as the human head, using a semicircular (half-volume) coil for both transmission and multi-channel reception.

MATERIALS AND METHODS

As a proof of concept, we present experimental data obtained using a seven-element half-volume (180 degrees of arc) transmit/receive quadrature transverse electromagnetic (TEM) coil. SENSE images of the human brain were acquired with a reduction factor of R=2, using two degenerate linear modes of the same coil as independent receive channels at 4T. Since the need for additional hardware (i.e., a separate set of receive coils) is eliminated, the design can be substantially simplified.

RESULTS

The experimental data demonstrate that linear modes of the half-volume TEM coil have essentially no noise correlation, and their sensitivity profiles satisfy the requirement for small g-factors. Also, this type of coil provides efficient transmission with a relatively large uniform region and a reception profile that is more uniform than that of the surface coils.

CONCLUSION

We demonstrate the feasibility of SENSE imaging using a half-volume coil. Half-volume coils allow reduced total power deposition compared to full-volume coils, and may replace the latter in body imaging applications in which the target region of interest (ROI) is smaller than the entire torso.

Three-dimensional high-inductance birdcage coil for NQR applications

A birdcage coil capable of operating simultaneously and independently in three orthogonal dimensions has been developed. A co-rotational end-ring mode producing an RF field in the longitudinal direction was utilized in addition to the two common transverse orthogonal modes. Two conductor turns were used for each of the coil's windows, increasing its inductance by a factor of four, thereby, making the coil suitable for low-frequency applications. Two or three-frequency detection can be easily carried out with this device. Orthogonality of the coil's channels allows arbitrarily close frequency positioning of each resonant mode, potentially useful in wide-line NQR studies, in which simultaneous excitation/detection of signals from three adjacent regions of a single wide line can be performed. The coil's performance was evaluated using a three-dimensional scheme, in which a circularly polarized experiment was combined with a linearly polarized measurement at another frequency, resulting in SNR improvement by 55%.

Flexible Biradicals in Liquid and Supercritical Carbon Dioxide: The Exchange Interaction, the Chain Dynamics, and a Comparison with Conventional Solvents

X-band time-resolved electron paramagnetic resonance (TREPR) spectra of three flexible biradicals of varying chain length and structure were obtained in liquid and supercritical carbon dioxide (CO2) solutions and compared to conventional solvents. For C16 acyl-alkyl biradical 1a, an average spin exchange interaction between the radical centers, J(avg), was obtained by spectral simulation using a simple model for spin-correlated radical pairs (SCRPs) and a small amount of T2 relaxation from a previously established J modulation mechanism. A large solvent effect on J(avg) was observed for the first time, varying by almost 1 order of magnitude from CO2 (J(avg) = -120 +/- 10 MHz) to heavy mineral oil (-11 +/- 3 MHz) for 1a. For C15 bis(alkyl) biradical 1b, spectra obtained under supercritical conditions are only slightly different from those detected in liquid CO2 but differ from spectra taken in benzene. For C10 acyl-alkyl biradical 2a, more emissive spin polarization due to S-T- mixing is observed in CO2 than in benzene. These results are discussed in terms of solvent properties such as dielectric constant, viscosity, and specific interactions. Both chain dynamics and changes to the equilibrium distribution of end-to-end distances can alter J(avg) and the observed ratio of S-T0 to S-T- mixing; however, faster chain dynamics is concluded to be the most likely cause of the observed effects in these systems.

Sensitivity enhancement and compensation of RF penetration artifact with planar actively detunable quadrature surface coil

An actively detunable planar quadrature surface coil for human body imaging at 4 T has been constructed and compared with a conventional linear surface coil. The coil could be used as a transmit/receive or a receive-only device in combination with a volume transmit coil. Transmission, reception profiles and the corresponding images acquired with each coil, as well as with both individual modes of the quadrature coil, are presented. Data collected using a tissue equivalent loaded phantom recorded with the linear surface coil demonstrated significant intensity distortions due to RF penetration artifact. The quadrature surface coil, on the other hand, provided compensation of the artifact, separately in its transmission and reception profiles as well as in the resultant images. Substantial sensitivity gain was also observed for the quadrature coil compared to the linear device. Significant advantages of using the quadrature surface coil over the linear device at 4 T have, therefore, been demonstrated.

Open half-volume quadrature transverse electromagnetic coil for high-field magnetic resonance imaging

A half-volume quadrature head transverse electromagnetic (TEM) coil has been constructed for 4 T imaging applications. This coil produces a sufficiently large homogeneous B(1) field region for the use as a volume coil. It provides superior transmission efficiency, resulting in significantly lower power deposition, as well as greater sensitivity and improved patient comfort and accessibility compared with conventional full-volume coils. Additionally, this coil suppresses the RF penetration artifact that distorts the RF magnetic field profile and alters the intensity in high-field images recorded with linear surface and volume coils. These advantages make it possible to apply this device as an efficient transmit/receive coil for high-field imaging with a restricted field of view.

4 T actively detunable transmit/receive transverse electromagnetic coil and 4-channel receive-only phased array for (1)H human brain studies

The design and construction of a 4 T transverse electromagnetic (TEM) transmit/receive head coil and a four-channel phased array receive-only RF system are described. To enable both high-resolution imaging of the entire brain and high-resolution spectroscopic imaging, active PIN diode decoupling was used in both the TEM resonator and each surface coil in the array. This configuration allows for both transmission and reception from the volume coil as well as reception from the phased array. The surface coils were decoupled by overlapping the coils and using preamplifier decoupling. Since at high frequencies construction of a lumped element matching quarter wavelength transformer, an important component of the preamplifier decoupling, becomes difficult, a transmission line approach was used. The system was tested and compared to a TEM volume transmit/receive head coil. A four- to sixfold improvement in signal-to-noise ratio from the sensitive volume of the array was achieved.

Modified perturbation method for transverse electromagnetic (TEM) coil tuning and evaluation

A modified perturbation method for tuning and testing volume head coils was developed. The common perturbation method, utilizing the change in resonance frequency of a resonator in response to the presence of a small dielectric or magnetic probe, was modified to modulate the frequency shift due to rotation of a probe. This modification enabled the RF magnetic and electric fields as well as the angular distribution of current in the longitudinal elements of the coil to be mapped. The latter serves as a quick test of magnetic field homogeneity by comparing the measured distribution with the sinusoidal function required for the field to be homogenous. The method was experimentally applied to tune and test a transverse electromagnetic (TEM) head coil.

Molecular features of the copper binding sites in the octarepeat domain of the prion protein

Recent evidence suggests that the prion protein (PrP) is a copper binding protein. The N-terminal region of human PrP contains four sequential copies of the highly conserved octarepeat sequence PHGGGWGQ spanning residues 60-91. This region selectively binds Cu2+ in vivo. In a previous study using peptide design, EPR, and CD spectroscopy, we showed that the HGGGW segment within each octarepeat comprises the fundamental Cu2+ binding unit [Aronoff-Spencer et al. (2000) Biochemistry 40, 13760-13771]. Here we present the first atomic resolution view of the copper binding site within an octarepeat. The crystal structure of HGGGW in a complex with Cu2+ reveals equatorial coordination by the histidine imidazole, two deprotonated glycine amides, and a glycine carbonyl, along with an axial water bridging to the Trp indole. Companion S-band EPR, X-band ESEEM, and HYSCORE experiments performed on a library of 15N-labeled peptides indicate that the structure of the copper binding site in HGGGW and PHGGGWGQ in solution is consistent with that of the crystal structure. Moreover, EPR performed on PrP(23-28, 57-91) and an 15N-labeled analogue demonstrates that the identified structure is maintained in the full PrP octarepeat domain. It has been shown that copper stimulates PrP endocytosis. The identified Gly-Cu linkage is unstable below pH approximately 6.5 and thus suggests a pH-dependent molecular mechanism by which PrP detects Cu2+ in the extracellular matrix or releases PrP-bound Cu2+ within the endosome. The structure also reveals an unusual complementary interaction between copper-structured HGGGW units that may facilitate molecular recognition between prion proteins, thereby suggesting a mechanism for transmembrane signaling and perhaps conversion to the pathogenic form.

Multifrequency probe for pulsed EPR and ENDOR spectroscopy

The design, construction, and performance of a multifrequency pulsed EPR and ENDOR probe for use at cryogenic temperatures are described. Interchangeable resonators based on a folded strip line design allow variation of the resonance frequency over a range of 5-11 GHz. Variable coupling to the resonator is achieved capacitively via a simple mechanical adjustment which is thermally and mechanically stable. The entire assembly is robust and easily fabricated. Common methods of analyzing the resonator parameters such as the Q-factor and coupling coefficient are discussed quantitatively. Probe performance data and multifrequency pulsed ENDOR spectra are presented.

Identification of the Cu2+ binding sites in the N-terminal domain of the prion protein by EPR and CD spectroscopy

Recent evidence indicates that the prion protein (PrP) plays a role in copper metabolism in the central nervous system. The N-terminal region of human PrP contains four sequential copies of the highly conserved octarepeat sequence PHGGGWGQ spanning residues 60-91. This region selectively binds divalent copper ions (Cu(2+)) in vivo. To elucidate the specific mode and site of binding, we have studied a series of Cu(2+)-peptide complexes composed of 1-, 2-, and 4-octarepeats and several sub-octarepeat peptides, by electron paramagnetic resonance (EPR, conventional X-band and low-frequency S-band) and circular dichroism (CD) spectroscopy. At pH 7.45, two EPR active binding modes are observed where the dominant mode appears to involve coordination of three nitrogens and one oxygen to the copper ion, while in the minor mode two nitrogens and two oxygens coordinate. ESEEM spectra demonstrate that the histidine imidazole contributes one of these nitrogens. The truncated sequence HGGGW gives EPR and CD that are indistinguishable from the dominant binding mode observed for the multi-octarepeat sequences and may therefore comprise the fundamental Cu(2+) binding unit. Both EPR and CD titration experiments demonstrate rigorously a 1:1 Cu(2+)/octarepeat binding stoichiometry regardless of the number of octarepeats in a given peptide sequence. Detailed spin integration of the EPR signals demonstrates that all of the bound Cu(2+) is detected thereby ruling out strong exchange coupling that is often found when there is imidazolate bridging between paramagnetic metal centers. A model consistent with these data is proposed in which Cu(2+) is bound to the nitrogen of the histidine imidazole side chain and to two nitrogens from sequential glycine backbone amides.