Genetic Characterization of Rift Valley Fever Virus in Insectivorous Bats, Egypt

Background: The endemic character of Rift Valley fever (RVF) disease points toward an interepidemic reservoir. Although not yet identified, bats and rodents may be implicated in RVF virus (RVFV) epidemiology. In this study, we investigated the putative role of Egyptian frugivorous and insectivorous bats in RVFV epidemiology in Egypt. Methods: From 2019 to 2021, 200 bats of two different species from six Egyptian governorates were tested for phleboviruses using real-time RT-PCR (rRT-PCR) and sequence analysis. Results: Screening through rRT-PCR showed evidence of the RVFV genome only in insectivorous bats. Partial sequence and phylogenetic analysis based on S and M genome segments showed that these viruses are genetically similar to those circulating (clade A) in livestock and humans during previously reported RVFV outbreaks in 1977/78 and 2003 in Egypt. Conclusions: Our molecular data suggest that the bat Pipistrellus deserti could play a role in RVFV ecology in Egypt.

No evidence of SARS-CoV-2 infection in Rousettus aegyptiacus bat in Egypt

Bats are considered ideal reservoirs for zoonotic viruses with emerging capabilities over the past two decades and spotted evidence points out that they may play a role as a reservoir host for SARS-CoV-2. To investigate the possible role of bats as part of SARS-CoV-2 anthropozoonotic spill-over infections in Egypt, a total of 800 samples obtained from 200 Egyptian fruit bats (Rousettus aegyptiacus) were tested for SARS-CoV-2 using quantitative RT-PCR assay (RT-qPCR). RT-qPCR analysis of RNA extracted from bat tissues showed no positive results for SARS-CoV-2 nucleic acid. These findings suggest that during the study period, the Rousettus aegyptiacus bat was not a reservoir or amplifying host for SARS-CoV-2 infection in Egypt. The lack of SARS-CoV-2 nucleic acid in Egyptian fruit bats is thought to make a significant contribution to SARS-CoV-2 epidemiology.