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Mader C, Michalik S, Vogl T. Erratum: Nicht-okklusive Mesenterialischämie bei Sars-CoV 2 Infektion. ROFO-FORTSCHR RONTG 2021. [DOI: 10.1055/s-0037-1599672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- C Mader
- Universitätsklinikum Frankfurt, Institut für Diagnostische und Interventionelle Radiologie, Frankfurt am Main
| | - S Michalik
- Universitätsklinikum Frankfurt, Institut für Diagnostische und Interventionelle Radiologie, Frankfurt am Main
| | - T Vogl
- Universitätsklinikum Frankfurt, Institut für Diagnostische und Interventionelle Radiologie, Frankfurt am Main
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Filik J, Ashton AW, Chang PCY, Chater PA, Day SJ, Drakopoulos M, Gerring MW, Hart ML, Magdysyuk OV, Michalik S, Smith A, Tang CC, Terrill NJ, Wharmby MT, Wilhelm H. Processing two-dimensional X-ray diffraction and small-angle scattering data in DAWN 2. J Appl Crystallogr 2017; 50:959-966. [PMID: 28656043 PMCID: PMC5458597 DOI: 10.1107/s1600576717004708] [Citation(s) in RCA: 185] [Impact Index Per Article: 26.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2017] [Accepted: 03/26/2017] [Indexed: 11/10/2022] Open
Abstract
The Powder Calibration and Processing packages implemented in DAWN 2 provide an automated diffraction-geometry calibration and data processing environment for two-dimensional diffraction experiments. The customizable processing chains permit the execution of data processing steps to convert raw two-dimensional data into meaningful data and diffractograms. The provenance of the processed data is maintained, which guarantees reproducibility and transparency of the data treatment. A software package for the calibration and processing of powder X-ray diffraction and small-angle X-ray scattering data is presented. It provides a multitude of data processing and visualization tools as well as a command-line scripting interface for on-the-fly processing and the incorporation of complex data treatment tasks. Customizable processing chains permit the execution of many data processing steps to convert a single image or a batch of raw two-dimensional data into meaningful data and one-dimensional diffractograms. The processed data files contain the full data provenance of each process applied to the data. The calibration routines can run automatically even for high energies and also for large detector tilt angles. Some of the functionalities are highlighted by specific use cases.
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Affiliation(s)
- J Filik
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - A W Ashton
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - P C Y Chang
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - P A Chater
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - S J Day
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - M Drakopoulos
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - M W Gerring
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - M L Hart
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - O V Magdysyuk
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - S Michalik
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - A Smith
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - C C Tang
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - N J Terrill
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - M T Wharmby
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - H Wilhelm
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
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Michalik S. Synthesis, spectroscopic investigation, structural characterization, and DFT calculations of [ReX2(N2COPh)(CH3PhCN)(PPh3)2] (X=Cl, Br). J COORD CHEM 2012. [DOI: 10.1080/00958972.2012.669036] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- S. Michalik
- a Department of Inorganic and Coordination Chemistry , Institute of Chemistry, University of Silesia, 9th Szkolna St. , 40-006 Katowice , Poland
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Michalik S, Małecki J, Kruszynski R, Kozik V, Kusz J, Krompiec M. The synthesis, molecular, crystal, and electronic structures of [ReBr2(O)(OCH3)(PPh3)2]. J COORD CHEM 2011. [DOI: 10.1080/00958972.2011.591930] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- S. Michalik
- a Department of Inorganic and Coordination Chemistry , Institute of Chemistry, University of Silesia, 9th Szkolna St. , 40-006 Katowice, Poland
| | - J.G. Małecki
- b Department of Crystallography , Institute of Chemistry, University of Silesia, ul. Szkolna 9 , 40-006, Katowice, Poland
| | - R. Kruszynski
- c Department of X-ray Crystallography and Crystal Chemistry , Institute of General and Ecological Chemistry, Technical University of Łódź, 116 Żeromski St. , 90-924 Łódź, Poland
| | - V. Kozik
- d Department of Organic Synthesis Chemistry , Institute of Chemistry, University of Silesia, ul. Szkolna 9 , 40-006 Katowice, Poland
| | - J. Kusz
- e Institute of Physics, University of Silesia, 4th Uniwersytecka St. , 40-006 Katowice
| | - M. Krompiec
- a Department of Inorganic and Coordination Chemistry , Institute of Chemistry, University of Silesia, 9th Szkolna St. , 40-006 Katowice, Poland
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Michalik S, Bednarcik J, Jóvári P, Honkimäki V, Webb A, Franz H, Fazakas E, Varga LK. Modelling the atomic structure of Al92U8 metallic glass. J Phys Condens Matter 2010; 22:404209. [PMID: 21386570 DOI: 10.1088/0953-8984/22/40/404209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The local atomic structure of the glassy Al(92)U(8) alloy was modelled by the reverse Monte Carlo (RMC) method, fitting x-ray diffraction (XRD) and extended x-ray absorption fine structure (EXAFS) signals. The final structural model was analysed by means of partial pair correlation functions, coordination number distributions and Voronoi tessellation. In our study we found that the most probable atomic separations between Al-Al and U-Al pairs in the glassy Al(92)U(8) alloy are 2.7 Å and 3.1 Å with coordination numbers 11.7 and 17.1, respectively. The Voronoi analysis did not support evidence of the existence of well-defined building blocks directly embedded in the amorphous matrix. The dense-random-packing model seems to be adequate for describing the connection between solvent and solute atoms.
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Affiliation(s)
- S Michalik
- Institute of Physics, P J Šafárik University in Košice, Park Angelinum 9, 041 54 Košice, Slovakia.
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Michalik S, Machura B, Kruszynski R, Kusz J, Krompiec M. Synthesis, spectroscopic investigation, structural characterization and DFT calculation of the complexes [ReX2(N2COPh)(4-PhPyr)(PPh3)2] (X=Cl,Br). Polyhedron 2010. [DOI: 10.1016/j.poly.2010.06.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Krompiec S, Penczek R, Krompiec M, Pluta T, Ignasiak H, Kita A, Michalik S, Matlengiewicz M, Filapek M. Transition Metals for Conjugation of Polyunsaturated Acids and their Esters. CURR ORG CHEM 2009. [DOI: 10.2174/138527209788452117] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Michalik S, Kruszynski R, Leszczyńska-Sejda K, Kusz J, Krompiec S. Synthesis, spectroscopic investigation, crystal and molecular structure of [ReCl 2(N 2COPh)(C 10H 14N 2)(PPh 3) 2]. J COORD CHEM 2009. [DOI: 10.1080/00958970802546024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- S. Michalik
- a Department of Inorganic and Coordination Chemistry , Institute of Chemistry, University of Silesia , Katowice, Poland
| | - R. Kruszynski
- b Department of X-Ray Crystallography and Crystal Chemistry , Institute of General and Ecological Chemistry, Technical University of Łódź , Łódź, Poland
| | - K. Leszczyńska-Sejda
- c Hydroelectrometallurgy Department , Institute of Non Ferrous Metals , Gliwice, Poland
| | - J. Kusz
- d Institute of Physics, University of Silesia , Katowice, Poland
| | - S. Krompiec
- a Department of Inorganic and Coordination Chemistry , Institute of Chemistry, University of Silesia , Katowice, Poland
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Affiliation(s)
- S. Michalik
- a Department of Inorganic and Coordination Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna St., 40-006 Katowice, Poland
| | - B. Machura
- a Department of Inorganic and Coordination Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna St., 40-006 Katowice, Poland
| | - R. Kruszynski
- b Department of X-ray Crystallography and Crystal Chemistry , Institute of General and Ecological Chemistry, Lodz University of Technology , 116 Żeromski St., 90-924 Łódź, Poland
| | - J. Kusz
- c Institute of Physics, University of Silesia , 4th Uniwersytecka St., 40-006 Katowice
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Michalik S, DziĘgielewski JO, Mrzigod J, Kruszynski R. Synthesis, spectroscopic investigation, crystal and molecular structure of [ReBr 2(N 2COPPh)(py)(PPh 3) 2]. J COORD CHEM 2007. [DOI: 10.1080/00958970600915397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- S. Michalik
- a Department of Inorganic and Radiation Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna Street, 40-006, Katowice, Poland
| | - J. O. DziĘgielewski
- a Department of Inorganic and Radiation Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna Street, 40-006, Katowice, Poland
| | - J. Mrzigod
- a Department of Inorganic and Radiation Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna Street, 40-006, Katowice, Poland
| | - R. Kruszynski
- b X-Ray Crystallography Laboratory , Institute of General and Ecological Chemistry, Technical University of Łódź , 116 Żeromski Street, 90-924, Łódź, Poland
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Affiliation(s)
- S. Michalik
- a Department of Inorganic and Radiation Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna Street, 40-006 Katowice, Poland
| | - J. O. DziĘgielewski
- a Department of Inorganic and Radiation Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna Street, 40-006 Katowice, Poland
| | - R. Kruszynski
- b X-Ray Crystallography Laboratory , Institute of General and Ecological Chemistry, Technical University of Łódź , 116 Żeromski Street, 90-924 Łódź, Poland
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Solecki J, Solecki J, Solecki J, Michalik S, Michalik S, Michalik S. Studies of 85Sr adsorption on grain fractions of soil. J Radioanal Nucl Chem 2006. [DOI: 10.1007/s10967-006-0115-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Solecki J, Solecki J, Solecki J, Solecki J, Michalik S, Michalik S, Michalik S, Michalik S. Studies of 85Sr adsorption on grain fractions of soil. J Radioanal Nucl Chem 2006. [DOI: 10.1007/s10967-006-0043-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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DziĘgielewski JO, Michalik S, Kruszynski † R, Bartczak TJ. Synthesis, spectroscopic investigation and molecular structures of [ReBr 2(N 2COPh)(C 3N 2H 4)(PPh 3) 2] and [ReBr 2(N 2COPh)(bpy)(PPh 3)]. J COORD CHEM 2005. [DOI: 10.1080/00958970412331336916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- J. O. DziĘgielewski
- a Department of Inorganic and Radiation Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna St., 40-006 Katowice, Poland
| | - S. Michalik
- a Department of Inorganic and Radiation Chemistry , Institute of Chemistry, University of Silesia , 9th Szkolna St., 40-006 Katowice, Poland
| | - R. Kruszynski †
- b X-Ray Crystallography Laboratory , Institute of General and Ecological Chemistry, Technical University of Łódź , 116 Żeromski St., 90-924 Łódź, Poland
| | - T. J. Bartczak
- b X-Ray Crystallography Laboratory , Institute of General and Ecological Chemistry, Technical University of Łódź , 116 Żeromski St., 90-924 Łódź, Poland
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Kilic S, Michalik S, Wang Y, Johnson JK, Enick RM, Beckman EJ. Effect of Grafted Lewis Base Groups on the Phase Behavior of Model Poly(dimethyl siloxanes) in CO2. Ind Eng Chem Res 2003. [DOI: 10.1021/ie030288b] [Citation(s) in RCA: 90] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- S. Kilic
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
| | - S. Michalik
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
| | - Y. Wang
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
| | - J. K. Johnson
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
| | - R. M. Enick
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
| | - E. J. Beckman
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
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Machura B, Dzięgielewski J, Michalik S, Bartczak T, Kruszynski R, Kusz J. Reactivity of [ReOX3(AsPh3)2] (X=Cl, Br) complexes towards gaseous nitric oxide. Polyhedron 2002. [DOI: 10.1016/s0277-5387(02)01254-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Abstract
Besides clinical and anamnestic data, image information from CT-image data in the tumour border was used for classification of brain tumours. If the image regions are properly selected a classification rate of 85% is obtained with a hierarchic classifier, although our study is based on only 139 patients.
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Affiliation(s)
- M Wolf
- Klinik und Poliklinik für Neurologie und Psychiatrie, Bereiches Medizin (Charité), Humboldt-Universität Berlin, Federal Republic of Germany
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