Atomic-Scale Time-Resolved Imaging of Krypton Dimers, Chains and Transition to a One-Dimensional Gas

Single-atom dynamics of noble-gas elements have been investigated using time-resolved transmission electron microscopy (TEM), with direct observation providing for a deeper understanding of chemical bonding, reactivity, and states of matter at the nanoscale. We report on a nanoscale system consisting of endohedral fullerenes encapsulated within single-walled carbon nanotubes ((Kr@C60)@SWCNT), capable of the delivery and release of krypton atoms on-demand, via coalescence of host fullerene cages under the action of the electron beam (in situ) or heat (ex situ). The state and dynamics of Kr atoms were investigated by energy dispersive X-ray spectroscopy (EDS), electron energy loss spectroscopy (EELS), and X-ray photoelectron spectroscopy (XPS). Kr atom positions were measured precisely using aberration-corrected high-resolution TEM (AC-HRTEM), aberration-corrected scanning TEM (AC-STEM), and single-atom spectroscopic imaging (STEM-EELS). The electron beam drove the formation of 2Kr@C120 capsules, in which van der Waals Kr2 and transient covalent [Kr2]+ bonding states were identified. Thermal coalescence led to the formation of longer coalesced nested nanotubes containing more loosely bound Krn chains (n = 3-6). In some instances, delocalization of Kr atomic positions was confirmed by STEM analysis as the transition to a one-dimensional (1D) gas, as Kr atoms were constrained to only one degree of translational freedom within long, well-annealed, nested nanotubes. Such nested nanotube structures were investigated by Raman spectroscopy. This material represents a highly compressed and dimensionally constrained 1D gas stable under ambient conditions. Direct atomic-scale imaging has revealed elusive bonding states and a previously unseen 1D gaseous state of matter of this noble gas element, demonstrating TEM to be a powerful tool in the discovery of chemistry at the single-atom level.

Ne, Ar, and Kr oscillators in the molecular cavity of fullerene C60

We used THz (terahertz) and INS (inelastic neutron scattering) spectroscopies to study the interaction between an endohedral noble gas atom and the C60 molecular cage. The THz absorption spectra of powdered A@C60 samples (A = Ar, Ne, Kr) were measured in the energy range from 0.6 to 75 meV for a series of temperatures between 5 and 300 K. The INS measurements were carried out at liquid helium temperature in the energy transfer range from 0.78 to 54.6 meV. The THz spectra are dominated by one line, between 7 and 12 meV, at low temperatures for three noble gas atoms studied. The line shifts to higher energy and broadens as the temperature is increased. Using a spherical oscillator model, with a temperature-independent parameterized potential function and an atom-displacement-induced dipole moment, we show that the change of the THz spectrum shape with temperature is caused by the anharmonicity of the potential function. We find good agreement between experimentally determined potential energy functions and functions calculated with Lennard-Jones additive pair-wise potentials with parameters taken from the work of Pang and Brisse, J. Chem. Phys. 97, 8562 (1993).

Synthesis of endohedral fullerenes by molecular surgery

Encapsulation of atoms or small molecules inside fullerenes provides a unique opportunity for study of the confined species in the isolated cavity, and the synthesis of closed C₆₀ or C₇₀ fullerenes with enclosed atoms or molecules has recently developed using the method of 'molecular surgery'; in which an open-cage intermediate fullerene is the host for encapsulation of a guest species, before repair of the cage opening. In this work we review the main methods for cage-opening and closure, and the achievements of molecular surgery to date.

Synthesis and 83Kr NMR spectroscopy of Kr@C60

Synthesis of Kr@C₆₀ is achieved by quantitative high-pressure encapsulation of the noble gas into an open-fullerene, and subsequent cage closure. Krypton is the largest noble gas entrapped in C₆₀ using 'molecular surgery' and Kr@C₆₀ is prepared with >99.4% incorporation of the endohedral atom, in ca. 4% yield from C₆₀. Encapsulation in C₆₀ causes a shift of the ⁸³Kr resonance by -39.5 ppm with respect to free ⁸³Kr in solution. The ⁸³Kr spin-lattice relaxation time T₁ is approximately 36 times longer for Kr encapsulated in C₆₀ than for free Kr in solution. This is the first characterisation of a stable Kr compound by ⁸³Kr NMR.

Synthesis of Ar@C60 using molecular surgery

Synthesis of Ar@C60 is described, using a route in which high-pressure argon filling of an open-fullerene and photochemical desulfinylation are the key steps for >95% encapsulation of the noble gas. Enrichment by recycling HPLC leads to quantitative incorporation of argon in the product endofullerene, with a mass recovery of tens of milligrams, allowing the first characterisation of fine structure in the solution 13C NMR spectrum.

A Solid-State Intramolecular Wittig Reaction Enables Efficient Synthesis of Endofullerenes Including Ne@C60 , 3 He@C60 , and HD@C60

An open‐cage fullerene incorporating phosphorous ylid and carbonyl group moieties on the rim of the orifice can be filled with gases (H₂, He, Ne) in the solid state, and the cage opening then contracted in situ by raising the temperature to complete an intramolecular Wittig reaction, trapping the atom or molecule inside. Known transformations complete conversion of the product fullerene to C₆₀ containing the endohedral species. As well as providing an improved synthesis of large quantities of ⁴He@C₆₀, H₂@C₆₀, and D₂@C₆₀, the method allows the efficient incorporation of expensive gases such as HD and ³He, to prepare HD@C₆₀ and ³He@C₆₀. The method also enables the first synthesis of Ne@C₆₀ by molecular surgery, and its characterization by crystallography and ¹³C NMR spectroscopy.

An Internuclear J-Coupling of 3He Induced by Molecular Confinement

The solution-state ¹³C NMR spectrum of the endofullerene ³He@C₆₀ displays a doublet structure due to a J-coupling of magnitude 77.5 ± 0.2 mHz at 340 K between the ³He nucleus and a ¹³C nucleus of the enclosing carbon surface. The J-coupling increases in magnitude with increasing temperature. Quantum chemistry calculations successfully predict the approximate magnitude of the coupling. This observation shows that the mutual proximity of molecular or atomic species is sufficient to induce a finite scalar nuclear spin-spin coupling, providing that translational motion is restricted by confinement. The phenomenon may have applications to the study of surface interactions and to mechanically bound species.

First Synthesis and Characterization of CH4 @C60

The endohedral fullerene CH₄@C₆₀, in which each C₆₀ fullerene cage encapsulates a single methane molecule, has been synthesized for the first time. Methane is the first organic molecule, as well as the largest, to have been encapsulated in C₆₀ to date. The key orifice contraction step, a photochemical desulfinylation of an open fullerene, was completed, even though it is inhibited by the endohedral molecule. The crystal structure of the nickel(II) octaethylporphyrin/ benzene solvate shows no significant distortion of the carbon cage, relative to the C₆₀ analogue, and shows the methane hydrogens as a shell of electron density around the central carbon, indicative of the quantum nature of the methane. The ¹H spin‐lattice relaxation times (T₁) for endohedral methane are similar to those observed in the gas phase, indicating that methane is freely rotating inside the C₆₀ cage. The synthesis of CH₄@C₆₀ opens a route to endofullerenes incorporating large guest molecules and atoms.

Synthesis and Properties of Open Fullerenes Encapsulating Ammonia and Methane

We describe the synthesis and characterisation of open fullerene (1) and its reduced form (2) in which CH₄ and NH₃ are encapsulated, respectively. The ¹H NMR resonance of endohedral NH₃ is broadened by scalar coupling to the quadrupolar ¹⁴n nucleus, which relaxes rapidly. This broadening is absent for small satellite peaks, which are attributed to natural abundance ¹⁵N. The influence of the scalar relaxation mechanism on the linewidth of the ¹H ammonia resonance is probed by variable temperature NMR. A rotational correlation time of τ_c=1.5 ps. is determined for endohedral NH₃, and of τ_c=57±5 ps. for the open fullerene, indicating free rotation of the encapsulated molecule. IR spectroscopy of NH₃@2 at 5 K identifies three vibrations of NH₃ (ν₁, ν₃ and ν₄) redshifted in comparison with free NH₃, and temperature dependence of the IR peak intensity indicates the presence of a large number of excited translational/ rotational states. Variable temperature ¹H NMR spectra indicate that endohedral CH₄ is also able to rotate freely at 223 K, on the NMR timescale. Inelastic neutron scattering (INS) spectra of CH₄@1 show both rotational and translational modes of CH₄. Energy of the first excited rotational state (J=1) of CH₄@1 is significantly lower than that of free CH₄.

Thermolysis of 1,3-dioxin-4-ones: fast generation of kinetic data using in-line analysis under flow

Rapid acquisition of kinetic data for thermolysis of 1,3-dioxin-4-ones is demonstrated with a commercial meso-scale flow reactor, using a step-change in flow rate or ‘push-out’ from the flow line.

Generation and Trapping of Ketenes in Flow

Ketenes were generated by the thermolysis of alkoxyalkynes under flow conditions, and then trapped with amines and alcohols to cleanly give amides and esters. For a 10 min reaction time, temperatures of 180, 160, and 140 °C were required for >95 % conversion of EtO, iPrO, and tBuO alkoxyalkynes, respectively. Variation of the temperature and flow rate with inline monitoring of the output by IR spectroscopy allowed the kinetic parameters for the conversion of 1-ethoxy-1-octyne to be easily estimated (Ea = 105.4 kJ/mol). Trapping of the in-situ-generated ketenes by alcohols to give esters required the addition of a tertiary amine catalyst to prevent competitive [2+2] addition of the ketene to the alkoxyalkyne precursor.

Synthesis and evaluation of a (3R,6S,9S)-2-oxo-1-azabicyclo[4.3.0]nonane scaffold as a mimic of Xaa-trans-Pro in poly-l-proline type II helix conformation

Stereoselective synthesis of a (3R,6S,9S)-2-oxo-1-azabicyclo[4.3.0]nonane mimic of Xaa-trans-Pro in poly-l-proline type II helix conformation is reported.

High-throughput synthesis and electrochemical screening of a library of modified electrodes for NADH oxidation

We report the combinatorial preparation and high-throughput screening of a library of modified electrodes designed to catalyze the oxidation of NADH. Sixty glassy carbon electrodes were covalently modified with ruthenium(II) or zinc(II) complexes bearing the redox active 1,10-phenanthroline-5,6-dione (phendione) ligand by electrochemical functionalization using one of four different linkers, followed by attachment of one of five different phendione metal complexes using combinatorial solid-phase synthesis methodology. This gave a library with three replicates of each of 20 different electrode modifications. This library was electrochemically screened in high-throughput (HTP) mode using cyclic voltammetry. The members of the library were evaluated with regard to the surface coverage, midpeak potential, and voltammetric peak separation for the phendione ligand, and their catalytic activity toward NADH oxidation. The surface coverage was found to depend on the length and flexibility of the linker and the geometry of the metal complex. The choices of linker and metal complex were also found to have significant impact on the kinetics of the reaction between the 1,10-phenanthroline-5,6-dione ligand and NADH. The rate constants for the reaction were obtained by analyzing the catalytic currents as a function of NADH concentration and scan rate, and the influence of the surface molecular architecture on the kinetics was evaluated.