Is normalized hindlimb length measurement in assessment of thyroid disruption in the amphibian metamorphosis assay relevant?

The amphibian metamorphosis assay represents an OECD Level 3 and EDSP Tier 1 ecotoxicity test assessing thyroid activity of chemicals in African clawed frog (Xenopus laevis). To evaluate the effectiveness of snout-vent length (SVL) normalization of hindlimb length (HLL), correlation between the HLL and SVL or body weight was evaluated in the control groups of 10 individual studies from three laboratories. Two studies required separate analysis of the Nieuwkoop-Faber (NF) stage ≤60 and >60 animals creating a total of 12 data sets. On study day 7, significant positive correlation between HLL and SVL or body weight was observed in eight and seven of the 10 data sets, respectively (r = 0.608-0.843 and 0.583-0.876). On study day 21, significant positive correlation between HLL and SVL or body weight was found in three and four of the 12 data sets, respectively (r = 0.452, 0.480 and 0.553 and r = 0.621, 0.546, 0.564 and 0.378). Significant positive correlation between HLL and SVL was found in three of five studies, including ≤NF stage 60 data (r = 0.564, 0.546 and 0.621). In one of eight studies, including >NF stage 60 data, the positive correlation between HLL and body weight was determined (r = 0.378). Negative or no correlation between HLL and SVL or body weight was found in the other late stage data sets. Therefore, use of SVL-normalized HLL to assess thyroid-mediated effects in X. laevis tadpoles is not warranted. HL stage relative to body stage should be considered.

A weight-of-evidence approach for the bioaccumulation assessment of triclosan in aquatic species

The bioaccumulation assessment of chemicals is challenging because of various metrics and criteria, multiple lines of evidence and underlying uncertainty in the data. Measured in vivo laboratory and field bioaccumulation data are generally considered preferable; however, quantitative structure-activity relationships (QSARs), mass balance models and in vitro data can also be considered. This case study critically evaluates in vivo, in vitro and in silico data and provides new data for the bioaccumulation assessment of triclosan (TCS). The review focusses on measured fish bioconcentration factors (BCFs) because this is the most commonly used regulatory metric. Reported measured fish BCFs range from about 20 to 8700L/kg-ww spanning a range of possible bioaccumulation assessment outcomes, i.e. from "not bioaccumulative" to "very bioaccumulative". Estimated biotransformation rate constants for fish obtained from in vivo, in vitro and in silico methods show general consensus fostering confidence in the selection of plausible values to confront uncertainty in the measured fish BCF tests. Other measurements (lines of evidence) from various species are also collected and reviewed. The estimated biotransformation rate constants and selected chemical property data are used to parameterize bioaccumulation models for aquatic species. Collectively the available lines of evidence are presented using a weight of evidence approach for assessing the bioaccumulation of TCS in aquatic species. Acceptable quality measured data and model predictions for TCS BCFs and bioaccumulation factors are lower than 2000L/kg. Biomagnification factors are <1 (kg/kg). The general consistency in the acceptable quality data is largely explained by the relatively efficient rates of TCS biotransformation in a range of species including measurements of significant in vitro activity of phase II conjugation reactions. The review demonstrates the value of combining models and measurements and, when necessary, applying multiple lines of evidence for chemical assessment.

CelE, a multidomain cellulase from Clostridium cellulolyticum: a key enzyme in the cellulosome?

CelE, one of the three major proteins of the cellulosome of Clostridium cellulolyticum, was characterized. The amino acid sequence of the protein deduced from celE DNA sequence led us to the supposition that CelE is a three-domain protein. Recombinant CelE and a truncated form deleted of the putative cellulose binding domain (CBD) were obtained. Deletion of the CBD induces a total loss of activity. Exhibiting rather low levels of activity on soluble, amorphous, and crystalline celluloses, CelE is more active on p-nitrophenyl-cellobiose than the other cellulases from this organism characterized to date. The main product of its action on Avicel is cellobiose (more than 90% of the soluble sugars released), and its attack on carboxymethyl cellulose is accompanied by a relatively small decrease in viscosity. All of these features suggest that CelE is a cellobiohydrolase which has retained a certain capacity for random attack mode. We measured saccharification of Avicel and bacterial microcrystalline cellulose by associations of CelE with four other cellulases from C. cellulolyticum and found that CelE acts synergistically with all tested enzymes. The positive influence of CelE activity on the activities of other cellulosomal enzymes may explain its relative abundance in the cellulosome.

Cellulosome from Clostridium cellulolyticum: molecular study of the Dockerin/Cohesin interaction

Clostridium cellulolyticum produces cellulolytic complexes (cellulosomes) made of 10-13 cell wall degrading enzymes tightly bound to a scaffolding protein (CipC) by means of their dockerin domain. It has previously been shown that the receptor domains in CipC are the cohesin domains and that the cohesin/dockerin interaction is calcium-dependent. In the present study, surface plasmon resonance was used to demonstrate that the free cohesin1 from CipC and dockerin from CelA have the same K(D) (2.5 x 10(-)(10) M) as that of the entire CelA and a larger fragment of CipC, the latter of which contains, in addition to cohesin1, a cellulose binding domain and a hydrophilic domain of unknown function. This demonstrates that neither the catalytic domain of CelA nor the noncohesin domains of CipC have any influence on the interaction. Dockerin domains are composed of two conserved segments of 22 residues: removal of the second segment abolishes the affinity for cohesin1, whereas modified dockerins having twice the first segment, twice the second, or both segments but in a reverse order have K(D) values for cohesin1 in the same range as that observed for wild-type dockerin. These data indicate that if two segments are required for the complexation with the cohesin, segments 1 and 2 are similar enough to replace each other. Calcium overlay experiments revealed that the dockerin domain has one calcium binding site per conserved segment. Circular dichroism performed on wild-type and mutant dockerins indicates that this domain is well structured and that removal of calcium only weakly affects the secondary structure, which remains 40-45% helical.

A most precious thread

For me schizophrenia severely ruptured the relationship that I had enjoyed with myself prior to the illness. My sense of being in the world, my thought processes and, indeed, the very way my senses perceived the world would go through involuntary changes. I was plunged, at times, into a confusing and frightening world ruled by my own paranoias and delusions. Living with the ever-changing experience of schizophrenia over 23 years has changed my relationship with myself many times and in many ways. In this paper I want to describe a few of these changes that have helped me deal with schizophrenia and to reveal a little of an ongoing communication with myself that is a large part of my process of recovery. The nurses I most valued at that time were those who, rather than imposing their reality on me, helped me to explore where reality and well-being might exist for me.