51
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Delisio J, Latif F, Glenn GM, Yao M, Geil L, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB46-27' (D3S635). Nucleic Acids Res 1991; 19:4564. [PMID: 1886785 PMCID: PMC328662 DOI: 10.1093/nar/19.16.4564-a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
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52
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Latif F, Glenn GM, Geil L, Rayford W, Delisio J, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB27-98" (D3S1096). Nucleic Acids Res 1991; 19:4565. [PMID: 1886786 PMCID: PMC328663] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
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53
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Latif F, Glenn GM, Geil L, Rayford W, Delisio J, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB45-86 (D3S633). Nucleic Acids Res 1991; 19:4565. [PMID: 1886787 PMCID: PMC328664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
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54
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Delisio J, Latif F, Glenn GM, Geil L, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB50-50' (D3S1099). Nucleic Acids Res 1991; 19:4568. [PMID: 1886790 PMCID: PMC328670] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
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55
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Latif F, Glenn GM, Geil L, Rayford W, Yao M, Delisio J, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB27-77 (D3S603). Nucleic Acids Res 1991; 19:4566. [PMID: 1886788 PMCID: PMC328666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
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56
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Delisio J, Latif F, Glenn GM, Geil L, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB4-59 (D3S575). Nucleic Acids Res 1991; 19:4568. [PMID: 1715987 PMCID: PMC328669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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57
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Glenn GM, Daniel LN, Choyke P, Linehan WM, Oldfield E, Gorin MB, Hosoe S, Latif F, Weiss G, Walther M. Von Hippel-Lindau (VHL) disease: distinct phenotypes suggest more than one mutant allele at the VHL locus. Hum Genet 1991; 87:207-10. [PMID: 2066108 DOI: 10.1007/bf00204184] [Citation(s) in RCA: 53] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
As part of an attempt to locate the von Hippel-Lindau locus (VHL) on chromosome 3, we evaluated 41 families with von Hippel-Lindau disease from the United States and Canada. One large family was identified whose disease phenotype was distinct from typical VHL. The most common disease manifestation was pheochromocytoma occurring in 57% (27/47) of affected family members. Few (4/47) affected family members had symptomatic spinal or cerebellar hemangioblastomas; no affected family member had renal cell carcinoma (0/47) or pancreatic cysts (0/24). Previously, genetic analysis demonstrated that the disease manifestations in this family were linked to RAF1 and D3S18, markers shown to be linked to typical VHL. These results suggest that there are mutant alleles at the VHL locus associated with distinct tissue specificities.
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58
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Latif F, Glenn GM, Geil L, Schmidt L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB4A-52''(D3S732). Nucleic Acids Res 1991; 19:2802. [PMID: 1674995 PMCID: PMC328229 DOI: 10.1093/nar/19.10.2802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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59
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Latif F, Glenn GM, Rayford W, Geil L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB29-48(D3S624). Nucleic Acids Res 1991; 19:2800. [PMID: 1710350 PMCID: PMC328226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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60
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Latif F, Glenn GM, Rayford W, Geil L, Yao M, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB30-62'(D3S606). Nucleic Acids Res 1991; 19:2798. [PMID: 1674989 PMCID: PMC328222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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61
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Delisio J, Latif F, Glenn GM, Geil L, Yao M, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB28-62(D3S736). Nucleic Acids Res 1991; 19:2800. [PMID: 1710349 PMCID: PMC328225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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62
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Latif F, Glenn GM, Rayford W, Geil L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB11-95(D3S730). Nucleic Acids Res 1991; 19:2801. [PMID: 1674993 PMCID: PMC328227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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63
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Latif F, Glenn GM, Rayford W, Geil L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB17-58(D3S598). Nucleic Acids Res 1991; 19:2799. [PMID: 1674991 PMCID: PMC328223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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64
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Latif F, Glenn GM, Rayford W, Geil L, Yao M, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB35-53(D3S731). Nucleic Acids Res 1991; 19:2801. [PMID: 1674994 PMCID: PMC328228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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65
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Latif F, Glenn GM, Rayford W, Geil L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB46-95(D3S620). Nucleic Acids Res 1991; 19:2798. [PMID: 1674990 PMCID: PMC328221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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66
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Latif F, Glenn GM, Rayford W, Wei M, Geil L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB41-10(D3S618). Nucleic Acids Res 1991; 19:2797. [PMID: 1674988 PMCID: PMC328220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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67
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Latif F, Glenn GM, Rayford W, Geil L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB46-35'(D3S636). Nucleic Acids Res 1991; 19:2799. [PMID: 1674992 PMCID: PMC328224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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68
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Latif F, Glenn GM, Rayford W, Geil L, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p:lambda LIB25-55(D3S602). Nucleic Acids Res 1991; 19:2797. [PMID: 1710348 PMCID: PMC328219] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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69
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Lerman MI, Latif F, Glenn GM, Daniel LN, Brauch H, Hosoe S, Hampsch K, Delisio J, Orcutt ML, McBride OW. Isolation and regional localization of a large collection (2,000) of single-copy DNA fragments on human chromosome 3 for mapping and cloning tumor suppressor genes. Hum Genet 1991; 86:567-77. [PMID: 1673958 DOI: 10.1007/bf00201543] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
A collection of 2,000 lambda phage-carrying human single-copy inserts (greater than 700 bp) were isolated from two chromosome-3 flow-sorted libraries. The single-copy DNA fragments were first sorted into 3p and 3q locations and about 700 3p fragments were regionally mapped using a deletion mapping panel comprised of two human-hamster and two-human-mouse cell hybrids, each containing a chromosome 3 with different deletions in the short arm. The hybrids were extensively mapped with a set of standard 3p markers physically localized or ordered by linkage. The deletion mapping panel divided the short arm into five distinct subregions (A-E). The 3p fragments were distributed on 3p regions as follows: region A, 26%; B, 31%; C, 4%; D, 4% and E, 35%. We screened 300 single-copy DNA fragments from the distal part of 3p (regions A and B) with ten restriction endonucleases for their ability to detect restriction fragment length polymorphisms (RFLPs). Of these fragments 110 (36%) were found to detect useful RFLPs; 35% detected polymorphisms with frequency of heterozygosity of 40% or higher, and 25% with frequency of 30% or higher. All polymorphisms originated from single loci and most of them were of the base pair substitution type. These RFLP markers make it possible to construct a fine linkage map that will span the distal part of chromosome 3p and encompasses the von Hippel-Lindau disease locus. The large number of single-copy fragments (2,000) spaced every 100-150 kb on chromosome 3 will make a significant contribution to mapping and sequencing the entire chromosome 3. The 300 conserved chromosome 3 probes will increase the existing knowledge of man-mouse homologies.
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70
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Latif F, Glenn GM, Tory K, Brauch H, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB41-51 (D3S632). Nucleic Acids Res 1991; 19:1163. [PMID: 1708497 PMCID: PMC333816 DOI: 10.1093/nar/19.5.1163-a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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71
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Latif F, Glenn GM, Tory K, Brauch H, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB46-100 (D3S641). Nucleic Acids Res 1991; 19:1170. [PMID: 1673567 PMCID: PMC333830 DOI: 10.1093/nar/19.5.1170-a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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72
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Latif F, Glenn GM, Brauch H, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB38-85 (D3S625). Nucleic Acids Res 1991; 19:961. [PMID: 2017379 PMCID: PMC333746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
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73
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Latif F, Glenn GM, Brauch H, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB31-38 (D3S726). Nucleic Acids Res 1991; 19:962. [PMID: 1708131 PMCID: PMC333747 DOI: 10.1093/nar/19.4.962] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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74
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Latif F, Glenn GM, Brauch H, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB03-23 (D3S573). Nucleic Acids Res 1991; 19:964. [PMID: 1708133 PMCID: PMC333752] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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75
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Latif F, Glenn GM, Brauch H, Delisio J, Hampsch K, Orcutt ML, Zbar B, Lerman MI. A new polymorphic probe on chromosome 3p: lambda LIB37-97'' (D3S724). Nucleic Acids Res 1991; 19:961. [PMID: 1708130 PMCID: PMC333745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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