Producción de metano in vitro en mezcla de gramíneas-leguminosas del trópico alto Colombiano

Se determinó la producción de metano in vitro para mezclas de gramíneas:leguminosas del trópico alto colombiano, utilizando la técnica de producción de gas. En dos lotes diferentes, se recogieron muestras de dos gramíneas, ryegrass (Lolium perenne) y kikuyo (Pennisetum clandes-tinum), y dos leguminosas, trébol blanco (Trifolium repens) y lotus grande (Lotus uliginosus). Se evaluaron cuatro mezclas de las gramíneas y las leguminosas: kikuyo y lotus, kikuyo y trébol blanco, ryegrass y lotus y ryegrass y trébol en tres proporciones diferentes de gramínea:leguminosa (90:10, 70:30 y 50:50). La concentración de metano en el gas se determinó por cromatografía de gases. Al aumentar las proporciones de leguminosas en la mezcla con el kikuyo, la producción de metano por unidad de materia seca degradada disminuyó hasta un 14 % (p

Shack-Hartmann spot dislocation map determination using an optical flow method

We present a robust, dense, and accurate Shack-Hartmann spot dislocation map determination method based on a regularized optical flow algorithm that does not require obtaining the spot centroids. The method is capable to measure in presence of strong noise, background illumination and spot modulating signals, which are typical limiting factors of traditional centroid detection algorithms. Moreover, the proposed approach is able to face cases where some of the reference beam spots have not a corresponding one in the distorted Hartmann diagram, and it can expand the dynamic range of the Shack-Hartmann sensor unwrapping the obtained dense dislocation maps. We have tested the algorithm with both simulations and experimental data obtaining satisfactory results. A complete MATLAB package that can reproduce all the results can be downloaded from [http://goo.gl/XbZVOr].

FASTDEF: fast defocus and astigmatism estimation for high-throughput transmission electron microscopy

In this work we present a fast and automated algorithm for estimating the contrast transfer function (CTF) of a transmission electron microscope. The approach is very suitable for High Throughput work because: (a) it does not require any initial defocus estimation, (b) it is almost an order of magnitude faster than existing approaches, (c) it opens the way to well-defined extensions to the estimation of higher order aberrations, at the same time that provides defocus and astigmatism estimations comparable in accuracy to well established methods, such as Xmipp and CTFFIND3 approaches. The new algorithm is based on obtaining the wrapped modulating phase of the power spectra density pattern by the use of a quadrature filter. This phase is further unwrapped in order to obtain the continuous and smooth absolute phase map; then a Zernike polynomial fitting is performed and the defocus and astigmatism parameters are determined. While the method does not require an initial estimation of the defocus parameters or any non-linear optimization procedure, these approaches can be used if further refinement is desired. Results of the CTF estimation method are presented for standard negative stained images, cryo-electron microscopy images in the absence of carbon support, as well as micrographs with only ice. Additionally, we have also tested the proposed method with micrographs acquired from tilted and untilted samples, obtaining good results. The algorithm is freely available as a part of the Xmipp package [http://xmipp.cnb.csic.es].

Evaluation of a standardised radiographic technique of the equine hoof

Radiography of the equine hoof is often used to obtain a diagnosis. Quantitative interpretation, especially for research purposes requires high quality and accuracy of radiographs. The purpose of this study was to describe and evaluate a radiographic technique for the lateromedial (LM) and the dorsopalmar (DP) view of the equine hoof. Ten radiographs for each view from one cadaver limb and from both front feet in a standing horse were taken in order to assess repeatability of the radiographic technique. The method requires easy to use adjustable and portable equipment and strictly defined external radio opaque markers on the hoof capsule. The digitalised radiographs were processed and analysed with the software package Metron PX, measuring 13 parameters in the LM view and 10 parameters in the DP view, respectively. Results show that with few exceptions measurements of these parameters revealed a coefficient of variation that was smaller than 0.05. It was concluded that this easy to use standardised radiographic technique ensures excellent accuracy and repeatability for both the LM and DP view. Hence, this method provides an adequate tool for quantitative assessment of the equine hoof, inter- and intraindividually.

Shack-Hartmann centroid detection using the spiral phase transform

We present a Shack-Hartmann (SH) centroid detection algorithm capable to measure in presence of strong noise, background illumination and spot modulating signals, which are typical limiting factors of traditional centroid detection algorithms. The proposed method is based on performing a normalization of the SH pattern using the spiral phase transform method and Fourier filtering. The spot centroids are then obtained using global thresholding and weighted average methods. We have tested the algorithm with simulations and experimental data obtaining satisfactory results. A complete MATLAB package that can reproduce all the results can be downloaded from [http://goo.gl/o2JhD].

Circular common-path point diffraction interferometer

A simple and compact point-diffraction interferometer with circular common-path geometry configuration is developed. The interferometer is constructed by a beam-splitter, two reflection mirrors, and a telescope system composed by two lenses. The signal and reference waves travel along the same path. Furthermore, an opaque mask containing a reference pinhole and a test object holder or test window is positioned in the common focal plane of the telescope system. The object wave is divided into two beams that take opposite paths along the interferometer. The reference wave is filtered by the reference pinhole, while the signal wave is transmitted through the object holder. The reference and signal waves are combined again in the beam-splitter and their interference is imaged in the CCD. The new design is compact, vibration insensitive, and suitable for the measurement of moving objects or dynamic processes.

Multiplicative phase-shifting interferometry using optical flow

Fringe patterns with a multiplicative phase shift among them appear in experimental techniques as photoelasticity and RGB shadow moiré, among others. These patterns cannot be processed using standard phase-shifting demodulation techniques. In this work, we propose to use a multiframe regularized optical flow algorithm to obtain the interesting modulating phase. The proposed technique has been applied to simulated and experimental interferograms obtaining satisfactory results.

Endovascular treatment of recurrent coiled aneurysms: assessment of complications and rebleeding during a decade in a single center

Recurrence is the main drawback of aneurysmal coiling. Additional coiling must sometimes be considered in patients with reopened aneurysms and expose the patient to the risk of a new procedure. Our purpose was to assess the procedural complications of additional endovascular treatments in patients with previously coiled but recurrent aneurysms treated by two neurointerventionalists during a decade in a single center. Between 1999 and 2009, 637 intracranial aneurysms were coiled and had a clinical and angiographic follow-up at our institution. Following the first embolization, 44 aneurysms were retreated with coils and 11 were retreated a second time. Retreatment was decided when a recurrence showed at angiographic follow-up. Early retreatments, performed in the first month after an incomplete or failed initial coiling, were excluded. We retrospectively analysed the procedural complications, rebleeding, clinical and angiographic outcomes of the retreatments. No death or bleeding occurred in these 55 additional procedures. We had three periprocedural thromboembolic complications and the procedural permanent morbidity was 1.8%. Clinical and angiographic follow-ups ranged from six months to nine years (mean: 37 months, median: 36 months). Thirty-seven of the 44 retreated aneurysms (84%) showed a stable occlusion at follow-up. Seven showed a recurrence but were not retreated due to the stability of the packing. No rebleeding was observed during the follow-up period. Our results show that endovascular treatment of recurrent aneurysms is associated with a low procedural risk.

Two-step demodulation based on the Gram-Schmidt orthonormalization method

This Letter presents an efficient, fast, and straightforward two-step demodulating method based on a Gram-Schmidt (GS) orthonormalization approach. The phase-shift value has not to be known and can take any value inside the range (0,2π), excluding the singular case, where it corresponds to π. The proposed method is based on determining an orthonormalized interferogram basis from the two supplied interferograms using the GS method. We have applied the proposed method to simulated and experimental interferograms, obtaining satisfactory results. A complete MATLAB software package is provided at http://goo.gl/IZKF3.

Pediatric health-related quality of life after intestinal transplantation

As outcomes after ITx improve, greater emphasis is needed on HRQOL. The primary aims of this study were to (i) assess the feasibility of measuring HRQOL in pediatric ITx recipients, (ii) measure HRQOL using validated instruments, and (iii) compare HRQOL in ITx recipients to healthy normal (NL) children. The CHQ and Pediatric Quality of Life (PedsQL4.0) instruments were administered to both patients and parents at outpatient visits. All 24 eligible patients were enrolled. The median age at study enrollment was 6.0 yr (range: 2-18 yr), and the median time from transplant to study enrollment was 2.8 yr (range: 0.5-11.8 yr). The majority of subjects were male (58%), Latino (58%), and liver-inclusive (92%) recipients. For CHQ and PedsQL4.0, parental responses were significantly lower in multiple categories including physical health and social functioning compared to healthy norms. Patient responses were not different from NL using CHQ but using PedsQL4.0 were significantly lower in the school functioning subcategory and psychosocial health summary score. HRQOL as reported by children and families after ITx is significantly lower in multiple categories compared to NL.

Emisión de metano entérico en rumiantes en pastoreo

Esta revisión explora el conocimiento asociado a los aspectos que determinan la emisión de metano en rumiantes en pastoreo. Se aborda el efecto de la especie forrajera, variedades dentro de especies y asociaciones gramínea/leguminosa, además de aspectos de manejo de la pastura como su madurez, carga animal, sistema de pastoreo y nivel de fertilización. El análisis hace énfasis en las influencias en las emisiones por unidad de materia seca consumida. Existen diferencias entre especies forrajeras en la emisión de metano que están asociadas a diferencias en las concentraciones de fibra, a variaciones en la tasa de paso y la presencia de metabolitos secundarios. Mayores concentraciones de fibra reducen las tasas de paso, el consumo de materia seca y aumenta la producción de metano por unidad de materia seca consumida. El efecto de la inclusión de leguminosas sobre la producción de metano es variable y esta influenciado por la presencia de metabolitos secundarios como los taninos y las saponinas. Los resultados de los trabajos revisados sugieren que existen oportunidades para reducir las emisiones de metano por unidad de materia seca consumida cuando las prácticas de manejo de las pasturas aumenten las tasas de paso y el consumo voluntario. Además el aumento en el consumo conllevaría a la reducción de emisiones de metano por unidad de producto animal.

Two-step interferometry by a regularized optical flow algorithm

A two-step phase-shifting method, that can demodulate open- and closed-fringed patterns without local sign ambiguity is presented. The proposed method only requires a constant phase-shift between the two interferograms. This phase-shift does not need to be known and can take any value inside the range (0, 2π), excluding the singular case where it corresponds to π. The proposed method is based on determining first the fringe direction map by a regularized optical flow algorithm. After that, we apply the spiral phase transform (SPT) to one of the fringe patterns and we determine its quadrature signal using the previously determined direction. The proposed technique has been applied to simulated and experimental interferograms obtaining satisfactory results. A complete MATLAB software package is provided in [http://goo.gl/Snnz7].

Analysis of the principal component algorithm in phase-shifting interferometry

We recently presented a new asynchronous demodulation method for phase-sampling interferometry. The method is based in the principal component analysis (PCA) technique. In the former work, the PCA method was derived heuristically. In this work, we present an in-depth analysis of the PCA demodulation method.

Phase-shifting interferometry based on principal component analysis

An asynchronous phase-shifting method based on principal component analysis (PCA) is presented. No restrictions about the background, modulation, and phase shifts are necessary. The presented method is very fast and needs very low computational requirements, so it can be used with very large images and/or very large image sets. The method is based on obtaining two quadrature signals by the PCA algorithm. We have applied the proposed method to simulated and experimental interferograms, obtaining satisfactory results.

Two-step self-tuning phase-shifting interferometry

A two-step self-tuning phase-shifting method is presented. The phase-step between the two interferograms is not known when the experiment is performed. Our demodulating method finds, in a robust way, this unknown phase-step. Once the phase-step is estimated we proceed to phase demodulate the interferograms. Moreover our method only requires the fringe patterns to have a constant unknown phase-shift between them. As a consequence, this technique can be used to demodulate open and closed-fringed patterns without phase-sign ambiguity. The method may be regarded as a self-tuning quadrature filter, which determines the phase-shift between the two fringe patterns and finally estimates the demodulated phase map. The proposed technique has been tested with simulated and real interferograms obtaining satisfactory results.