151
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Pfaffen C, Frey HM, Ottiger P, Leutwyler S, Bachorz RA, Klopper W. Large-amplitude vibrations of an N–H⋯π hydrogen bonded cis-amide–benzene complex. Phys Chem Chem Phys 2010; 12:8208-18. [DOI: 10.1039/c002056g] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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152
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Tew DP, Hättig C, Bachorz RA, Klopper W. Explicitly Correlated Coupled-Cluster Theory. Challenges and Advances in Computational Chemistry and Physics 2010. [DOI: 10.1007/978-90-481-2885-3_20] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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153
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Carissan Y, Klopper W. Hydrogen abstraction from biphenyl, acenaphthylene, naphthalene and phenanthrene by atomic hydrogen and methyl radical: DFT and G3(MP2)-RAD data. ACTA ACUST UNITED AC 2010. [DOI: 10.1016/j.theochem.2009.10.017] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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154
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Henke P, Pankewitz T, Klopper W, Breher F, Schnöckel H. Momentaufnahmen bei der Bildung einer Al-Al-σ-Bindung aus {AlR2}-Einheiten - experimentelle und quantenchemische Befunde. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200990262] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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155
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Henke P, Pankewitz T, Klopper W, Breher F, Schnöckel H. Snapshots of the AlAl Ï-Bond Formation Starting from {AlR2} Units: Experimental and Computational Observations. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/anie.200990260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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156
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Kerkines ISK, Petsalakis ID, Theodorakopoulos G, Klopper W. Low-lying absorption and emission spectra of pyrene, 1,6-dithiapyrene, and tetrathiafulvalene: A comparison between ab initio and time-dependent density functional methods. J Chem Phys 2009; 131:224315. [DOI: 10.1063/1.3271347] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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157
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Henke P, Pankewitz T, Klopper W, Breher F, Schnöckel H. Innentitelbild: Momentaufnahmen bei der Bildung einer Al-Al-σ-Bindung aus {AlR2}-Einheiten - experimentelle und quantenchemische Befunde (Angew. Chem. 43/2009). Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200904023] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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158
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Henke P, Pankewitz T, Klopper W, Breher F, Schnöckel H. Inside Cover: Snapshots of the AlAl σ-Bond Formation Starting from {AlR2} Units: Experimental and Computational Observations (Angew. Chem. Int. Ed. 43/2009). Angew Chem Int Ed Engl 2009. [DOI: 10.1002/anie.200904023] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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159
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Henke P, Pankewitz T, Klopper W, Breher F, Schnöckel H. Momentaufnahmen bei der Bildung einer Al-Al-σ-Bindung aus {AlR2}-Einheiten - experimentelle und quantenchemische Befunde. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200901754] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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160
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Klopper W, Bachorz RA, Tew DP, Aguilera-Iparraguirre J, Carissan Y, Hättig C. Accurate Coupled Cluster Calculations of the Reaction Barrier Heights of Two CH3• + CH4 Reactions. J Phys Chem A 2009; 113:11679-84. [DOI: 10.1021/jp902753s] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Wim Klopper
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, Universités dʼAix-Marseille I, II & III—CNRS, UMR 6263: Institut des Sciences Moléculaires de Marseille (iSm2), F-13397 Marseille Cedex 20, France, and Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany
| | - Rafał A. Bachorz
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, Universités dʼAix-Marseille I, II & III—CNRS, UMR 6263: Institut des Sciences Moléculaires de Marseille (iSm2), F-13397 Marseille Cedex 20, France, and Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany
| | - David P. Tew
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, Universités dʼAix-Marseille I, II & III—CNRS, UMR 6263: Institut des Sciences Moléculaires de Marseille (iSm2), F-13397 Marseille Cedex 20, France, and Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany
| | - Jorge Aguilera-Iparraguirre
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, Universités dʼAix-Marseille I, II & III—CNRS, UMR 6263: Institut des Sciences Moléculaires de Marseille (iSm2), F-13397 Marseille Cedex 20, France, and Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany
| | - Yannick Carissan
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, Universités dʼAix-Marseille I, II & III—CNRS, UMR 6263: Institut des Sciences Moléculaires de Marseille (iSm2), F-13397 Marseille Cedex 20, France, and Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany
| | - Christof Hättig
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, Universités dʼAix-Marseille I, II & III—CNRS, UMR 6263: Institut des Sciences Moléculaires de Marseille (iSm2), F-13397 Marseille Cedex 20, France, and Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany
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161
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Jung T, Beckhaus R, Klüner T, Höfener S, Klopper W. Unexpected Trimerization of Pyrazine in the Coordination Sphere of Low-Valent Titanocene Fragments. J Chem Theory Comput 2009; 5:2044-9. [DOI: 10.1021/ct900137r] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Thomas Jung
- Inorganic Chemistry and Theoretical Chemistry, Institute of Pure and Applied Chemistry, Carl von Ossietzky University, D-26111 Oldenburg, Germany and Institute of Physical Chemistry, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
| | - Rüdiger Beckhaus
- Inorganic Chemistry and Theoretical Chemistry, Institute of Pure and Applied Chemistry, Carl von Ossietzky University, D-26111 Oldenburg, Germany and Institute of Physical Chemistry, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
| | - Thorsten Klüner
- Inorganic Chemistry and Theoretical Chemistry, Institute of Pure and Applied Chemistry, Carl von Ossietzky University, D-26111 Oldenburg, Germany and Institute of Physical Chemistry, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
| | - Sebastian Höfener
- Inorganic Chemistry and Theoretical Chemistry, Institute of Pure and Applied Chemistry, Carl von Ossietzky University, D-26111 Oldenburg, Germany and Institute of Physical Chemistry, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
| | - Wim Klopper
- Inorganic Chemistry and Theoretical Chemistry, Institute of Pure and Applied Chemistry, Carl von Ossietzky University, D-26111 Oldenburg, Germany and Institute of Physical Chemistry, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
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162
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Fliegl H, Sundholm D, Taubert S, Jusélius J, Klopper W. Magnetically Induced Current Densities in Aromatic, Antiaromatic, Homoaromatic, and Nonaromatic Hydrocarbons. J Phys Chem A 2009; 113:8668-76. [DOI: 10.1021/jp9029776] [Citation(s) in RCA: 149] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Heike Fliegl
- Institut für Nanotechnologie, Forschungszentrum Karlsruhe GmbH, Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| | - Dage Sundholm
- Department of Chemistry, P.O. Box 55 (A.I. Virtanens plats 1), FIN-00014 University of Helsinki, Finland
| | - Stefan Taubert
- Department of Chemistry, P.O. Box 55 (A.I. Virtanens plats 1), FIN-00014 University of Helsinki, Finland
| | - Jonas Jusélius
- Department of Chemistry, University of Tromsø, N-9037 Tromsø, Norway
| | - Wim Klopper
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), Engesser Str. 15, D-76131 Karlsruhe, Germany
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163
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Abstract
Films comprising predominantly novel isomers of C(60) [=C(60)(nIPR)] have been generated by low energy ion beam deposition of vibronically excited C(60)(+) onto graphite followed by selective sublimation of C(60)(I(h)) from the deposited isomer mixture. The incident ions were generated by electron impact ionization/fragmentation of sublimed C(70). Images of the C(60)(nIPR) films obtained by applying atomic force microscopy show aggregates, which we attribute to covalently interlinked C(60)(nIPR) units. The covalent bonds are inferred from the significantly higher thermal stability of the C(60)(nIPR) films compared to the C(60)(I(h)) van der Waals solid-as measured by thermal desorption with mass spectrometric detection of the C(60) mass channel (the only desorbable species). In contrast to the characteristic doublet structure of the occupied valence band in the ultraviolet photoelectron spectrum of pure C(60)(I(h)), the valence band of C(60)(nIPR) films exhibits a triplet feature with the additional peak occurring at a binding energy of approximately 2.6 eV. This is an indicator of the electronic modifications induced by intermolecular bonding. C(60)(nIPR) films exhibit a narrower band gap than found for C(60)(I(h)). They also have significantly different chemical reactivity toward incorporation of thermal energy deuterium atoms. In order to model the experimental photoelectron spectra, various covalently linked oligomers of (#1809)C(60)(C(2v)), the second most stable conventional 60-atom fullerene cage, were calculated by means of the density functional theory. These spectral predictions together with analogous previous observations on related fullerene solids such as C(58) lead us to infer that C(60)(nIPR) films consist of fullerene cage isomers containing one or more adjacent pentagon pairs, which mediate covalent cage-cage interconnection.
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Affiliation(s)
- Daniel Löffler
- Lehrstuhl Physikalische Chemie Mikroskopischer Systeme, Institut für Physikalische Chemie, Universität Karlsruhe, 76131 Karlsruhe, Germany
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164
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Nied D, Klopper W, Breher F. Pentagerma[1.1.1]propellane: A Combined Experimental and Quantum Chemical Study on the Nature of the Interactions between the Bridgehead Atoms. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200990059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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165
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Nied D, Klopper W, Breher F. Pentagerma[1.1.1]propellane: A Combined Experimental and Quantum Chemical Study on the Nature of the Interactions between the Bridgehead Atoms. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/anie.200990057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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166
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Ottiger P, Pfaffen C, Leist R, Leutwyler S, Bachorz RA, Klopper W. Strong N−H···π Hydrogen Bonding in Amide−Benzene Interactions. J Phys Chem B 2009; 113:2937-43. [DOI: 10.1021/jp8110474] [Citation(s) in RCA: 97] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Philipp Ottiger
- Departement für Chemie and Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Chantal Pfaffen
- Departement für Chemie and Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Roman Leist
- Departement für Chemie and Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Samuel Leutwyler
- Departement für Chemie and Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Rafał A. Bachorz
- Center for Functional Nanostructures (CFN) and Institut für Physikalische Chemie, UniversitätKarlsruhe (TH), D-76128 Karlsruhe, Germany
| | - Wim Klopper
- Center for Functional Nanostructures (CFN) and Institut für Physikalische Chemie, UniversitätKarlsruhe (TH), D-76128 Karlsruhe, Germany
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167
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Nied D, Klopper W, Breher F. Pentagerma[1.1.1]propellane: A Combined Experimental and Quantum Chemical Study on the Nature of the Interactions between the Bridgehead Atoms. Angew Chem Int Ed Engl 2009; 48:1411-6. [DOI: 10.1002/anie.200805289] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Dominik Nied
- Institut für Anorganische Chemie, Universität Karlsruhe (TH), Engesserstrasse 15, 76131 Karlsruhe (Germany), Fax: (+49) 721‐608‐7021
| | - Wim Klopper
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), Engesserstrasse 15, 76131 Karlsruhe (Germany), Fax: (+49) 721‐608‐3319
| | - Frank Breher
- Institut für Anorganische Chemie, Universität Karlsruhe (TH), Engesserstrasse 15, 76131 Karlsruhe (Germany), Fax: (+49) 721‐608‐7021
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168
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Vogiatzis KD, Mavrandonakis A, Klopper W, Froudakis GE. Ab initio Study of the Interactions between CO2and N-Containing Organic Heterocycles. Chemphyschem 2009; 10:374-83. [DOI: 10.1002/cphc.200800583] [Citation(s) in RCA: 164] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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169
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van Wüllen C, Klopper W, Mukherjee D. Electron correlation, molecular properties and relativity – A tribute to Werner Kutzelnigg. Chem Phys 2009. [DOI: 10.1016/j.chemphys.2009.01.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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170
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González-García N, Klopper W, Olzmann M. Thermochemistry of the HOSO2+O2 association reaction and enthalpy of formation of HOSO4: A quantum chemical study. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.01.045] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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171
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Nied D, Klopper W, Breher F. Pentagerma[1.1.1]propellane: A Combined Experimental and Quantum Chemical Study on the Nature of the Interactions between the Bridgehead Atoms. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200805289] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Dominik Nied
- Institut für Anorganische Chemie, Universität Karlsruhe (TH), Engesserstrasse 15, 76131 Karlsruhe (Germany), Fax: (+49) 721‐608‐7021
| | - Wim Klopper
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), Engesserstrasse 15, 76131 Karlsruhe (Germany), Fax: (+49) 721‐608‐3319
| | - Frank Breher
- Institut für Anorganische Chemie, Universität Karlsruhe (TH), Engesserstrasse 15, 76131 Karlsruhe (Germany), Fax: (+49) 721‐608‐7021
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172
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Fliegl H, Fink K, Klopper W, Anson CE, Powell AK, Clérac R. Ab initio study of the magnetic exchange coupling constants of a structural model [CaMn3IIIMnII] of the oxygen evolving center in photosystem II. Phys Chem Chem Phys 2009; 11:3900-9. [DOI: 10.1039/b819444k] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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173
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174
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Abuhmaiera R, Lan Y, Ako AM, Kostakis GE, Mavrandonakis A, Klopper W, Clérac R, Anson CE, Powell AK. One-dimensional Cu(II) coordination polymers: tuning the structure by modulating the “carboxylate arm” lengths of polycarboxylate ligands. CrystEngComm 2009. [DOI: 10.1039/b820834d] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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175
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Kostakis GE, Mavrandonakis A, Abbas G, Klopper W, Schooss D, Lebedkin S, Lan Y, Powell AK. An in-depth study on hydrogen-bonded 3-D frameworks possessing hydrophobic layers and hydrophilic pillars. CrystEngComm 2009. [DOI: 10.1039/b907030c] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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176
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Taubert S, Sundholm D, Jusélius J, Klopper W, Fliegl H. Calculation of Magnetically Induced Currents in Hydrocarbon Nanorings. J Phys Chem A 2008; 112:13584-92. [PMID: 19055397 DOI: 10.1021/jp805086q] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Stefan Taubert
- Department of Chemistry, P.O. Box 55 (A.I. Virtanens plats 1), FIN-00014 University of Helsinki, Finland, Centre for Theoretical and Computational Chemistry, University of Tromsø, N-9037 Tromsø, Norway, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, and Institut für Nanotechnologie, Forschungszentrum Karlsruhe GmbH, Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| | - Dage Sundholm
- Department of Chemistry, P.O. Box 55 (A.I. Virtanens plats 1), FIN-00014 University of Helsinki, Finland, Centre for Theoretical and Computational Chemistry, University of Tromsø, N-9037 Tromsø, Norway, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, and Institut für Nanotechnologie, Forschungszentrum Karlsruhe GmbH, Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| | - Jonas Jusélius
- Department of Chemistry, P.O. Box 55 (A.I. Virtanens plats 1), FIN-00014 University of Helsinki, Finland, Centre for Theoretical and Computational Chemistry, University of Tromsø, N-9037 Tromsø, Norway, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, and Institut für Nanotechnologie, Forschungszentrum Karlsruhe GmbH, Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| | - Wim Klopper
- Department of Chemistry, P.O. Box 55 (A.I. Virtanens plats 1), FIN-00014 University of Helsinki, Finland, Centre for Theoretical and Computational Chemistry, University of Tromsø, N-9037 Tromsø, Norway, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, and Institut für Nanotechnologie, Forschungszentrum Karlsruhe GmbH, Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
| | - Heike Fliegl
- Department of Chemistry, P.O. Box 55 (A.I. Virtanens plats 1), FIN-00014 University of Helsinki, Finland, Centre for Theoretical and Computational Chemistry, University of Tromsø, N-9037 Tromsø, Norway, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany, and Institut für Nanotechnologie, Forschungszentrum Karlsruhe GmbH, Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen, Germany
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177
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Pankewitz T, Klopper W, Henke P, Schnöckel H. Isomeric Al2R4, Mg2R2Species and Oligomerisation Products: Investigation of Al-Al and Mg-Mg σ Bonding. Eur J Inorg Chem 2008. [DOI: 10.1002/ejic.200800626] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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178
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Pankewitz T, Klopper W. Theoretical investigation of equilibrium and transition state structures, binding energies and barrier heights of water-encapsulated open-cage [59]fullerenone complexes. Chem Phys Lett 2008. [DOI: 10.1016/j.cplett.2008.09.023] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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179
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Bachorz RA, Klopper W, Gutowski M, Li X, Bowen KH. Photoelectron spectrum of valence anions of uracil and first-principles calculations of excess electron binding energies. J Chem Phys 2008; 129:054309. [PMID: 18698902 DOI: 10.1063/1.2965128] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023] Open
Abstract
The photoelectron spectrum (PES) of the uracil anion is reported and discussed from the perspective of quantum chemical calculations of the vertical detachment energies (VDEs) of the anions of various tautomers of uracil. The PES peak maximum is found at an electron binding energy of 2.4 eV, and the width of the main feature suggests that the parent anions are in a valence rather than a dipole-bound state. The canonical tautomer as well as four tautomers that result from proton transfer from an NH group to a C atom were investigated computationally. At the Hartree-Fock and second-order Moller-Plesset perturbation theory levels, the adiabatic electron affinity (AEA) and the VDE have been converged to the limit of a complete basis set to within +/-1 meV. Post-MP2 electron-correlation effects have been determined at the coupled-cluster level of theory including single, double, and noniterative triple excitations. The quantum chemical calculations suggest that the most stable valence anion of uracil is the anion of a tautomer that results from a proton transfer from N1H to C5. It is characterized by an AEA of 135 meV and a VDE of 1.38 eV. The peak maximum is as much as 1 eV larger, however, and the photoelectron intensity is only very weak at 1.38 eV. The PES does not lend support either to the valence anion of the canonical tautomer, which is the second most stable anion, and whose VDE is computed at about 0.60 eV. Agreement between the peak maximum and the computed VDE is only found for the third most stable tautomer, which shows an AEA of approximately -0.1 eV and a VDE of 2.58 eV. This tautomer results from a proton transfer from N3H to C5. The results illustrate that the characteristics of biomolecular anions are highly dependent on their tautomeric form. If indeed the third most stable anion is observed in the experiment, then it remains an open question why and how this species is formed under the given conditions.
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Affiliation(s)
- Rafał A Bachorz
- Center for Functional Nanostructures (CFN) and Lehrstuhl für Theoretische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
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180
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Klopper W, Tew DP, González-García N, Olzmann M. Heat of formation of the HOSO2 radical from accurate quantum chemical calculations. J Chem Phys 2008; 129:114308. [DOI: 10.1063/1.2973637] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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181
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Bihlmeier A, Tew DP, Klopper W. Low energy hydrogenation products of extended π systems CnH2x: A density functional theory search strategy, benchmarked against CCSD(T), and applied to C60. J Chem Phys 2008; 129:114303. [DOI: 10.1063/1.2973636] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
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182
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183
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Aguilera-Iparraguirre J, Curran HJ, Klopper W, Simmie JM. Accurate Benchmark Calculation of the Reaction Barrier Height for Hydrogen Abstraction by the Hydroperoxyl Radical from Methane. Implications for CnH2n+2 where n = 2 → 4. J Phys Chem A 2008; 112:7047-54. [DOI: 10.1021/jp8012464] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jorge Aguilera-Iparraguirre
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), Karlsruhe, Germany, and Combustion Chemistry Centre, National University of Ireland, Galway, Ireland
| | - Henry J. Curran
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), Karlsruhe, Germany, and Combustion Chemistry Centre, National University of Ireland, Galway, Ireland
| | - Wim Klopper
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), Karlsruhe, Germany, and Combustion Chemistry Centre, National University of Ireland, Galway, Ireland
| | - John M. Simmie
- Institut für Physikalische Chemie, Universität Karlsruhe (TH), Karlsruhe, Germany, and Combustion Chemistry Centre, National University of Ireland, Galway, Ireland
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184
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Wedel T, Gehring T, Podlech J, Kordel E, Bihlmeier A, Klopper W. Nucleophilic Additions to Alkylidene Bis(sulfoxides)—Stereoelectronic Effects in Vinyl Sulfoxides. Chemistry 2008; 14:4631-9. [DOI: 10.1002/chem.200701847] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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185
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186
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Bischoff FA, Höfener S, Glöß A, Klopper W. Explicitly correlated second-order perturbation theory calculations on molecules containing heavy main-group elements. Theor Chem Acc 2008. [DOI: 10.1007/s00214-008-0441-8] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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187
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Armbruster MK, Weigend F, van Wüllen C, Klopper W. Self-consistent treatment of spin-orbit interactions with efficient Hartree-Fock and density functional methods. Phys Chem Chem Phys 2008; 10:1748-56. [PMID: 18350180 DOI: 10.1039/b717719d] [Citation(s) in RCA: 120] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Efficient self-consistent field (SCF) schemes including both scalar relativistic effects and spin-orbit (SO) interactions at Hartree-Fock (HF) and density functional (DFT) levels are presented. SO interactions require the extension of standard procedures to two-component formalisms. Efficiency is achieved by using effective core potentials (ECPs) and by employing the resolution-of-the-identity approximation for the Coulomb part (RI-J) in pure DFT calculations as well as also for the HF-exchange part (RI-JK) in the case of HF or hybrid-DFT treatments. The procedures were implemented in the program system TURBOMOLE; efficiency is demonstrated for comparably large systems, such as Pb54. Relevance of SO effects for electronic structure and stability is illustrated by treatments of small Pb and Po clusters with and without accounting for SO effects.
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Affiliation(s)
- Markus K Armbruster
- Forschungszentrum Karlsruhe GmbH, Institut für Nanotechnologie, P. O. Box 3640, D-76021, Karlsruhe, Germany
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188
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Tew DP, Klopper W, Neiss C, Hättig C. Comment on Quintuple-ζ quality coupled-cluster correlation energies with triple-ζ basis sets by D. P. Tew, W. Klopper, C. Neiss and C. Hättig, Phys. Chem. Chem. Phys., 2007, 9, 1921 [erratum]. Phys Chem Chem Phys 2008. [DOI: 10.1039/b811567b] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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189
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Höfener S, Bischoff FA, Glöß A, Klopper W. Slater-type geminals in explicitly-correlated perturbation theory: application to n-alkanols and analysis of errors and basis-set requirements. Phys Chem Chem Phys 2008; 10:3390-9. [DOI: 10.1039/b803575j] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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190
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Bachorz RA, Bischoff FA, Höfener S, Klopper W, Ottiger P, Leist R, Frey JA, Leutwyler S. Scope and limitations of the SCS-MP2 method for stacking and hydrogen bonding interactions. Phys Chem Chem Phys 2008; 10:2758-66. [DOI: 10.1039/b718494h] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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191
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192
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Boese AD, Martin JML, Klopper W. Basis Set Limit Coupled Cluster Study of H-Bonded Systems and Assessment of More Approximate Methods. J Phys Chem A 2007; 111:11122-33. [DOI: 10.1021/jp072431a] [Citation(s) in RCA: 84] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- A. Daniel Boese
- Institute of Nanotechnology, Forschungszentrum Karlsruhe, P.O. Box 3640, D-76021 Karlsruhe, Germany
| | - Jan M. L. Martin
- Department of Organic Chemistry, Weizmann Institute of Science, IL-76100 Reovot, Israel
| | - Wim Klopper
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
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193
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Leist R, Frey J, Ottiger P, Frey HM, Leutwyler S, Bachorz R, Klopper W. Nucleobase–Fluorobenzene Interactions: Hydrogen Bonding Wins over π Stacking. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200701171] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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194
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Leist R, Frey JA, Ottiger P, Frey HM, Leutwyler S, Bachorz RA, Klopper W. Nucleobase–Fluorobenzene Interactions: Hydrogen Bonding Wins over π Stacking. Angew Chem Int Ed Engl 2007; 46:7449-52. [PMID: 17722215 DOI: 10.1002/anie.200701171] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Roman Leist
- Department of Chemistry and Biochemistry, Universität Bern, Freiestrasse 3, 3012 Bern, Switzerland
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195
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Abstract
Benchmark, frozen-core CCSD(T) equilibrium harmonic vibrational frequencies of 12 closed-shell and five open-shell molecules are computed to within 1 cm-1 of the basis set limit using the explicitly correlated CCSD(T)-R12 method. The convergence of the standard CCSD(T) method with the one-particle basis sets of Dunning and co-workers is examined and found to be slow, with mean and maximum absolute errors of 1.3 and 3.5 cm-1 remaining at the cc-pV6Z level. Finite basis set effects do not appear to introduce systematic errors in equilibrium harmonic frequencies, and mean absolute errors reduce by a factor of 2 for each basis set cardinal number increment. The convergence of individual equilibrium harmonic frequencies is not guaranteed to be monotonic due to the associated shift in the equilibrium structure. The inclusion of computed scalar relativistic effects and previously available corrections for core-valence correlation and higher-order excitations in the cluster operator results in an agreement with experimentally derived harmonic frequencies of 0.1, 0.3, and -0.4 cm-1 for HF, N2, and CO, respectively. F2 continues to present a challenge to computational chemistry with an error of 3.2 cm-1, primarily resulting from the high basis set dependence of the quadruples contribution.
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Affiliation(s)
- David P Tew
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
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196
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Abstract
Second-order Møller-Plesset (MP2) calculations (using the approximate resolution of the identity, RI-MP2), explicitly correlated MP2 (MP2-R12) calculations, and coupled-cluster calculations including all single and double excitations with a perturbative estimate of triple excitations [CCSD(T)] are performed to study the interaction of molecular hydrogen with the small molecules HF, H2O, NH3, and LiOH. Different adsorption positions are studied. In the cases of H2O and NH3, the most favorable configuration places H2 in an end-on fashion on the O or N atom, respectively. In the cases of HF and LiOH, the H2 molecule takes a side-on position on the H atom of HF or the Li atom. With respect to MP2 calculations in a triple-zeta basis, both the enlargement of the basis set and the extension of the correlation treatment (CCSD(T) vs MP2) increase the interaction energy. The basis set limit CCSD(T) estimates of the interaction energy of H2 with the HF, H2O, NH3, and LiOH molecules amount to 4.40, 2.67, 3.02, and 10.74 kJ mol-1, respectively. The interaction energy for the simultaneous interaction of H2 with two LiOH molecules does not significantly exceed the value obtained for the interaction with a single LiOH molecule. Furthermore, the interaction energies (by MP2) of H2 with glycine, the glycine dimer, and imidazolium chloride amount to 2.78, 5.00, and 6.30 kJ mol-1, respectively.
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Affiliation(s)
- Olaf Hübner
- Institut für Nanotechnologie, Forschungszentrum Karlsruhe, Postfach 3640, D-76021 Karlsruhe, Germany
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197
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Abstract
A valence-type anion of the canonical tautomer of uracil has been characterized using explicitly correlated second-order Moller-Plesset perturbation theory (RI-MP2-R12) in conjunction with conventional coupled-cluster theory with single, double, and perturbative triple excitations. At this level of electron-correlation treatment and after inclusion of a zero-point vibrational energy correction, determined in the harmonic approximation at the RI-MP2 level of theory, the valence anion is adiabatically stable with respect to the neutral molecule by 40 meV. The anion is characterized by a vertical detachment energy of 0.60 eV. To obtain accurate estimates of the vertical and adiabatic electron binding energies, a scheme was applied in which electronic energy contributions from various levels of theory were added, each of them extrapolated to the corresponding basis-set limit. The MP2 basis-set limits were also evaluated using an explicitly correlated approach, and the results of these calculations are in agreement with the extrapolated values. A remarkable feature of the valence anionic state is that the adiabatic electron binding energy is positive but smaller than the adiabatic electron binding energy of the dipole-bound state.
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Affiliation(s)
- Rafał A Bachorz
- Center for Functional Nanostructures (CFN), Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
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198
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Abstract
The physical interactions among electrons and nuclei, responsible for the chemistry of atoms and molecules, is well described by quantum mechanics and chemistry is therefore fully described by the solutions of the Schrödinger equation. In all but the simplest systems we must be content with approximate solutions, the principal difficulty being the treatment of the correlation between the motions of the many electrons, arising from their mutual repulsion. This article aims to provide a clear understanding of the physical concept of electron correlation and the modern methods used for its approximation. Using helium as a simple case study and beginning with an uncorrelated orbital picture of electronic motion, we first introduce Fermi correlation, arising from the symmetry requirements of the exact wave function, and then consider the Coulomb correlation arising from the mutual Coulomb repulsion between the electrons. Finally, we briefly discuss the general treatment of electron correlation in modern electronic-structure theory, focussing on the Hartree-Fock and coupled-cluster methods and addressing static and dynamical Coulomb correlation.
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Affiliation(s)
- David P Tew
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128 Karlsruhe, Germany
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199
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Hellweg A, Hättig C, Höfener S, Klopper W. Optimized accurate auxiliary basis sets for RI-MP2 and RI-CC2 calculations for the atoms Rb to Rn. Theor Chem Acc 2007. [DOI: 10.1007/s00214-007-0250-5] [Citation(s) in RCA: 429] [Impact Index Per Article: 25.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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200
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Abstract
The explicitly-correlated coupled-cluster method CCSD(T)(R12) is extended to include F12 geminal basis functions that decay exponentially with the interelectronic distance and reproduce the form of the average Coulomb hole more accurately than linear-r(12). Equations derived using the Ansatz 2 strong orthogonality projector are presented. The convergence of the correlation energy with orbital basis set for the new CCSD(T)(F12) method is studied and found to be rapid, 98% of the basis set limit correlation energy is typically recovered using triple-zeta orbital basis sets. The performance for reaction enthalpies is assessed via a test set of 15 reactions involving 23 molecules. The title statement is found to hold equally true for total and relative correlation energies.
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Affiliation(s)
- David P Tew
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische Chemie, Universität Karlsruhe (TH), D-76128, Karlsruhe, Germany
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