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Wang J, Li H, Li C, Lu W, Cui H, Zhong X, Ren S, Shang Z, Zhou W. Efficient Seizure Detection by Complementary Integration of Convolutional Neural Network and Vision Transformer. Int J Neural Syst 2025:2550023. [PMID: 40159955 DOI: 10.1142/s0129065725500236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
Abstract
Epilepsy, as a prevalent neurological disorder, is characterized by its high incidence, sudden onset, and recurrent nature. The development of an accurate and real-time automatic seizure detection system is crucial for assisting clinicians in making precise diagnoses and providing timely treatment for epilepsy. However, conventional automatic seizure detection methods often face limitations in simultaneously capturing both local features and long-range correlations inherent in EEG signals, which constrains the accuracy of these existing detection systems. To address this challenge, we propose a novel end-to-end seizure detection framework, named CNN-ViT, which complementarily integrates a Convolutional Neural Network (CNN) for capturing local inductive bias of EEG and Vision Transformer (ViT) for further mining their long-range dependency. Initially, raw electroencephalogram (EEG) signals are filtered and segmented and then sent into the CNN-ViT model to learn their local and global feature representations and identify the seizure patterns. Meanwhile, we adopt a global max-pooling strategy to reduce the scale of the CNN-ViT model and make it focus on the most discriminative features. Given the occurrence of diverse artifacts in long-term EEG recordings, we further employ post-processing techniques to improve the seizure detection performance. The proposed CNN-ViT model, when evaluated using the publicly accessible CHB-MIT EEG dataset, reveals its outstanding performance with a sensitivity of 99.34% at a segment-based level and 99.70% at an event-based level. On the SH-SDU dataset we collected, our method yielded a segment-based sensitivity of 99.86%, specificity of 94.33%, and accuracy of 94.40%, along with an event-based sensitivity of 100%. The total processing time for 1[Formula: see text]h EEG data was only 3.07[Formula: see text]s. These exceptional results demonstrate the potential of our method as a reference for clinical real-time seizure detection applications.
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Affiliation(s)
- Jiaqi Wang
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
| | - Haotian Li
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
| | - Chuanyu Li
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
| | - Weisen Lu
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
| | - Haozhou Cui
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
| | - Xiangwen Zhong
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
| | - Shuhao Ren
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
| | - Zhida Shang
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Weidong Zhou
- School of Integrated Circuits, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
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Queipo M, Mateo J, Torres AM, Barbado J. The Effect of Naturally Acquired Immunity on Mortality Predictors: A Focus on Individuals with New Coronavirus. Biomedicines 2025; 13:803. [PMID: 40299374 DOI: 10.3390/biomedicines13040803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2025] [Revised: 03/19/2025] [Accepted: 03/24/2025] [Indexed: 04/30/2025] Open
Abstract
Background/Objectives: The spread of the COVID-19 pandemic has spurred the development of advanced healthcare tools to effectively manage patient outcomes. This study aims to identify key predictors of mortality in hospitalized patients with some level of natural immunity, but not yet vaccinated, using machine learning techniques. Methods: A total of 363 patients with COVID-19 admitted to Río Hortega University Hospital in Spain between the second and fourth waves of the pandemic were included in this study. Key characteristics related to both the patient's previous status and hospital stay were screened using the Random Forest (RF) machine learning technique. Results: Of the 19 variables identified as having the greatest influence on predicting mortality, the most powerful ones could be identified at the time of hospital admission. These included the assessment of severity in community-acquired pneumonia (CURB-65) scale, age, the Glasgow Coma Scale (GCS), and comorbidities, as well as laboratory results. Some variables associated with hospitalization and intensive care unit (ICU) admission (acute renal failure, shock, PRONO sessions and the Acute Physiology and Chronic Health Evaluation [APACHE-II] scale) showed a certain degree of significance. The Random Forest (RF) method showed high accuracy, with a precision of >95%. Conclusions: This study shows that natural immunity generates significant changes in the evolution of the disease. As has been shown, machine learning models are an effective tool to improve personalized patient care in different periods.
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Affiliation(s)
- Mónica Queipo
- Autoimmunity and Inflammation Research Group, Río Hortega University Hospital, 47012 Valladolid, Spain
- Cooperative Research Network Focused on Health Results-Advanced Therapies (RICORS TERAV), 28220 Madrid, Spain
| | - Jorge Mateo
- Medical Analysis Expert Group, Institute of Technology, University of Castilla-La Mancha, 13001 Cuenca, Spain
- Medical Analysis Expert Group, Instituto de Investigación Sanitaria de Castilla-La Mancha (IDISCAM), 45071 Toledo, Spain
| | - Ana María Torres
- Medical Analysis Expert Group, Institute of Technology, University of Castilla-La Mancha, 13001 Cuenca, Spain
- Medical Analysis Expert Group, Instituto de Investigación Sanitaria de Castilla-La Mancha (IDISCAM), 45071 Toledo, Spain
| | - Julia Barbado
- Autoimmunity and Inflammation Research Group, Río Hortega University Hospital, 47012 Valladolid, Spain
- Cooperative Research Network Focused on Health Results-Advanced Therapies (RICORS TERAV), 28220 Madrid, Spain
- Internal Medicine, Río Hortega University Hospital, 47012 Valladolid, Spain
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Palanisamy S, Rajaguru H. Leveraging Classifier Performance Using Heuristic Optimization for Detecting Cardiovascular Disease from PPG Signals. Diagnostics (Basel) 2024; 14:2287. [PMID: 39451610 PMCID: PMC11507182 DOI: 10.3390/diagnostics14202287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2024] [Revised: 09/24/2024] [Accepted: 10/10/2024] [Indexed: 10/26/2024] Open
Abstract
BACKGROUND/OBJECTIVES Photoplethysmography (PPG) signals, which measure blood volume changes through light absorption, are increasingly used for non-invasive cardiovascular disease (CVD) detection. Analyzing PPG signals can help identify irregular heart patterns and other indicators of CVD. METHODS This research involves a total of 41 subjects sourced from the CapnoBase database, consisting of 21 normal subjects and 20 CVD cases. In the initial stage, heuristic optimization algorithms, such as ABC-PSO, the Cuckoo Search algorithm (CSA), and the Dragonfly algorithm (DFA), were applied to reduce the dimension of the PPG data. Next, these Dimensionally Reduced (DR) PPG data are then fed into various classifiers such as Linear Regression (LR), Linear Regression with Bayesian Linear Discriminant Classifier (LR-BLDC), K-Nearest Neighbors (KNN), PCA-Firefly, Linear Discriminant Analysis (LDA), Kernel LDA (KLDA), Probabilistic LDA (ProbLDA), SVM-Linear, SVM-Polynomial, and SVM-RBF, to identify CVD. Classifier performance is evaluated using Accuracy, Kappa, MCC, F1 Score, Good Detection Rate (GDR), Error rate, and Jaccard Index (JI). RESULTS The SVM-RBF classifier for ABC PSO dimensionality reduced values outperforms other classifiers, achieving the highest accuracy of 95.12% along with the minimum error rate of 4.88%. In addition to that, it provides an MCC and kappa value of 0.90, a GDR and F1 score of 95%, and a Jaccard Index of 90.48%. CONCLUSIONS This study demonstrated that heuristic-based optimization and machine learning classification of PPG signals are highly effective for the non-invasive detection of cardiovascular disease.
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Affiliation(s)
- Sivamani Palanisamy
- Department of Electronics and Communication Engineering, Jansons Institute of Technology, Coimbatore 641659, India;
| | - Harikumar Rajaguru
- Department of Electronics and Communication Engineering, Bannari Amman Institute of Technology, Sathyamangalam 638401, India
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Krishnan PT, Erramchetty SK, Balusa BC. Advanced framework for epilepsy detection through image-based EEG signal analysis. Front Hum Neurosci 2024; 18:1336157. [PMID: 38317649 PMCID: PMC10839025 DOI: 10.3389/fnhum.2024.1336157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Accepted: 01/05/2024] [Indexed: 02/07/2024] Open
Abstract
Background Recurrent and unpredictable seizures characterize epilepsy, a neurological disorder affecting millions worldwide. Epilepsy diagnosis is crucial for timely treatment and better outcomes. Electroencephalography (EEG) time-series data analysis is essential for epilepsy diagnosis and surveillance. Complex signal processing methods used in traditional EEG analysis are computationally demanding and difficult to generalize across patients. Researchers are using machine learning to improve epilepsy detection, particularly visual feature extraction from EEG time-series data. Objective This study examines the application of a Gramian Angular Summation Field (GASF) approach for the analysis of EEG signals. Additionally, it explores the utilization of image features, specifically the Scale-Invariant Feature Transform (SIFT) and Oriented FAST and Rotated BRIEF (ORB) techniques, for the purpose of epilepsy detection in EEG data. Methods The proposed methodology encompasses the transformation of EEG signals into images based on GASF, followed by the extraction of features utilizing SIFT and ORB techniques, and ultimately, the selection of relevant features. A state-of-the-art machine learning classifier is employed to classify GASF images into two categories: normal EEG patterns and focal EEG patterns. Bern-Barcelona EEG recordings were used to test the proposed method. Results This method classifies EEG signals with 96% accuracy using SIFT features and 94% using ORB features. The Random Forest (RF) classifier surpasses state-of-the-art approaches in precision, recall, F1-score, specificity, and Area Under Curve (AUC). The Receiver Operating Characteristic (ROC) curve shows that Random Forest outperforms Support Vector Machine (SVM) and k-Nearest Neighbors (k-NN) classifiers. Significance The suggested method has many advantages over time-series EEG data analysis and machine learning classifiers used in epilepsy detection studies. A novel image-based preprocessing pipeline using GASF for robust image synthesis and SIFT and ORB for feature extraction is presented here. The study found that the suggested method can accurately discriminate between normal and focal EEG signals, improving patient outcomes through early and accurate epilepsy diagnosis.
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Affiliation(s)
| | | | - Bhanu Chander Balusa
- School of Computer Science and Engineering, Vellore Institute of Technology, Chennai, India
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Abdellatef E, Emara HM, Shoaib MR, Ibrahim FE, Elwekeil M, El-Shafai W, Taha TE, El-Fishawy AS, El-Rabaie ESM, Eldokany IM, Abd El-Samie FE. Automated diagnosis of EEG abnormalities with different classification techniques. Med Biol Eng Comput 2023; 61:3363-3385. [PMID: 37672143 DOI: 10.1007/s11517-023-02843-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 04/23/2023] [Indexed: 09/07/2023]
Abstract
Automatic seizure detection and prediction using clinical Electroencephalograms (EEGs) are challenging tasks due to factors such as low Signal-to-Noise Ratios (SNRs), high variance in epileptic seizures among patients, and limited clinical data constraints. To overcome these challenges, this paper presents two approaches for EEG signal classification. One of these approaches depends on Machine Learning (ML) tools. The used features are different types of entropy, higher-order statistics, and sub-band energies in the Hilbert Marginal Spectrum (HMS) domain. The classification is performed using Support Vector Machine (SVM), Logistic Regression (LR), and K-Nearest Neighbor (KNN) classifiers. Both seizure detection and prediction scenarios are considered. The second approach depends on spectrograms of EEG signal segments and a Convolutional Neural Network (CNN)-based residual learning model. We use 10000 spectrogram images for each class. In this approach, it is possible to perform both seizure detection and prediction in addition to a 3-state classification scenario. Both approaches are evaluated on the Children's Hospital Boston and the Massachusetts Institute of Technology (CHB-MIT) dataset, which contains 24 EEG recordings for 6 males and 18 females. The results obtained for the HMS-based model showed an accuracy of 100%. The CNN-based model achieved accuracies of 97.66%, 95.59%, and 94.51% for Seizure (S) versus Pre-Seizure (PS), Non-Seizure (NS) versus S, and NS versus S versus PS classes, respectively. These results demonstrate that the proposed approaches can be effectively used for seizure detection and prediction. They outperform the state-of-the-art techniques for automatic seizure detection and prediction. Block diagram of proposed epileptic seizure detection method using HMS with different classifiers.
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Affiliation(s)
- Essam Abdellatef
- Department of Electronics and Communications, Delta Higher Institute for Engineering and Technology (DHIET), 35511, Mansoura, Egypt
| | - Heba M Emara
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt
| | - Mohamed R Shoaib
- School of Computer Science and Engineering, Nanyang Technological University, Singapore, Singapore
| | - Fatma E Ibrahim
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt
| | - Mohamed Elwekeil
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt
| | - Walid El-Shafai
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt.
- Security Engineering Laboratory, Department of Computer Science College of Engineering, Prince Sultan University, Riyadh, 11586, Saudi Arabia.
| | - Taha E Taha
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt
| | - Adel S El-Fishawy
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt
| | | | - Ibrahim M Eldokany
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt
| | - Fathi E Abd El-Samie
- Faculty of Electronic Engineering, Menoufia University, 32952, Menouf, Egypt
- Department of Information Technology, College of Computer and Information Sciences, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, 11671, Riyadh, Saudi Arabia
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Chellappan D, Rajaguru H. Enhancement of Classifier Performance Using Swarm Intelligence in Detection of Diabetes from Pancreatic Microarray Gene Data. Biomimetics (Basel) 2023; 8:503. [PMID: 37887634 PMCID: PMC10604158 DOI: 10.3390/biomimetics8060503] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 10/08/2023] [Accepted: 10/20/2023] [Indexed: 10/28/2023] Open
Abstract
In this study, we focused on using microarray gene data from pancreatic sources to detect diabetes mellitus. Dimensionality reduction (DR) techniques were used to reduce the dimensionally high microarray gene data. DR methods like the Bessel function, Discrete Cosine Transform (DCT), Least Squares Linear Regression (LSLR), and Artificial Algae Algorithm (AAA) are used. Subsequently, we applied meta-heuristic algorithms like the Dragonfly Optimization Algorithm (DOA) and Elephant Herding Optimization Algorithm (EHO) for feature selection. Classifiers such as Nonlinear Regression (NLR), Linear Regression (LR), Gaussian Mixture Model (GMM), Expectation Maximum (EM), Bayesian Linear Discriminant Classifier (BLDC), Logistic Regression (LoR), Softmax Discriminant Classifier (SDC), and Support Vector Machine (SVM) with three types of kernels, Linear, Polynomial, and Radial Basis Function (RBF), were utilized to detect diabetes. The classifier's performance was analyzed based on parameters like accuracy, F1 score, MCC, error rate, FM metric, and Kappa. Without feature selection, the SVM (RBF) classifier achieved a high accuracy of 90% using the AAA DR methods. The SVM (RBF) classifier using the AAA DR method for EHO feature selection outperformed the other classifiers with an accuracy of 95.714%. This improvement in the accuracy of the classifier's performance emphasizes the role of feature selection methods.
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Affiliation(s)
- Dinesh Chellappan
- Department of Electrical and Electronics Engineering, KPR Institute of Engineering and Technology, Coimbatore 641 407, Tamil Nadu, India;
| | - Harikumar Rajaguru
- Department of Electronics and Communication Engineering, Bannari Amman Institute of Technology, Sathyamangalam 638 401, Tamil Nadu, India
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Chellappan D, Rajaguru H. Detection of Diabetes through Microarray Genes with Enhancement of Classifiers Performance. Diagnostics (Basel) 2023; 13:2654. [PMID: 37627916 PMCID: PMC10453776 DOI: 10.3390/diagnostics13162654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Revised: 08/06/2023] [Accepted: 08/07/2023] [Indexed: 08/27/2023] Open
Abstract
Diabetes is a life-threatening, non-communicable disease. Diabetes mellitus is a prevalent chronic disease with a significant global impact. The timely detection of diabetes in patients is necessary for an effective treatment. The primary objective of this study is to propose a novel approach for identifying type II diabetes mellitus using microarray gene data. Specifically, our research focuses on the performance enhancement of methods for detecting diabetes. Four different Dimensionality Reduction techniques, Detrend Fluctuation Analysis (DFA), the Chi-square probability density function (Chi2pdf), the Firefly algorithm, and Cuckoo Search, are used to reduce high dimensional data. Metaheuristic algorithms like Particle Swarm Optimization (PSO) and Harmonic Search (HS) are used for feature selection. Seven classifiers, Non-Linear Regression (NLR), Linear Regression (LR), Logistics Regression (LoR), Gaussian Mixture Model (GMM), Bayesian Linear Discriminant Classifier (BLDC), Softmax Discriminant Classifier (SDC), and Support Vector Machine-Radial Basis Function (SVM-RBF), are utilized to classify the diabetic and non-diabetic classes. The classifiers' performances are analyzed through parameters such as accuracy, recall, precision, F1 score, error rate, Matthews Correlation Coefficient (MCC), Jaccard metric, and kappa. The SVM (RBF) classifier with the Chi2pdf Dimensionality Reduction technique with a PSO feature selection method attained a high accuracy of 91% with a Kappa of 0.7961, outperforming all of the other classifiers.
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Affiliation(s)
- Dinesh Chellappan
- Department of Electrical and Electronics Engineering, KPR Institute of Engineering and Technology, Coimbatore 641 407, Tamil Nadu, India
| | - Harikumar Rajaguru
- Department of Electronics and Communication Engineering, Bannari Amman Institute of Technology, Sathyamangalam 638 401, Tamil Nadu, India;
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Prabhakar SK, Won DO. Performance comparison of bio-inspired and learning-based clustering analysis with machine learning techniques for classification of EEG signals. Front Artif Intell 2023; 6:1156269. [PMID: 37415937 PMCID: PMC10321130 DOI: 10.3389/frai.2023.1156269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Accepted: 05/25/2023] [Indexed: 07/08/2023] Open
Abstract
A comprehensive analysis of an automated system for epileptic seizure detection is explained in this work. When a seizure occurs, it is quite difficult to differentiate the non-stationary patterns from the discharges occurring in a rhythmic manner. The proposed approach deals with it efficiently by clustering it initially for the sake of feature extraction by using six different techniques categorized under two different methods, e.g., bio-inspired clustering and learning-based clustering. Learning-based clustering includes K-means clusters and Fuzzy C-means (FCM) clusters, while bio-inspired clusters include Cuckoo search clusters, Dragonfly clusters, Firefly clusters, and Modified Firefly clusters. Clustered values were then classified with 10 suitable classifiers, and after the performance comparison analysis of the EEG time series, the results proved that this methodology flow achieved a good performance index and a high classification accuracy. A comparatively higher classification accuracy of 99.48% was achieved when Cuckoo search clusters were utilized with linear support vector machines (SVM) for epilepsy detection. A high classification accuracy of 98.96% was obtained when K-means clusters were classified with a naive Bayesian classifier (NBC) and Linear SVM, and similar results were obtained when FCM clusters were classified with Decision Trees yielding the same values. The comparatively lowest classification accuracy, at 75.5%, was obtained when Dragonfly clusters were classified with the K-nearest neighbor (KNN) classifier, and the second lowest classification accuracy of 75.75% was obtained when Firefly clusters were classified with NBC.
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Parreño Torres A, Roncero-Parra C, Borja AL, Mateo-Sotos J. Inter-Hospital Advanced and Mild Alzheimer's Disease Classification Based on Electroencephalogram Measurements via Classical Machine Learning Algorithms. J Alzheimers Dis 2023; 95:1667-1683. [PMID: 37718814 DOI: 10.3233/jad-230525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/19/2023]
Abstract
BACKGROUND In pursuit of diagnostic tools capable of targeting distinct stages of Alzheimer's disease (AD), this study explores the potential of electroencephalography (EEG) combined with machine learning (ML) algorithms to identify patients with mild or moderate AD (ADM) and advanced AD (ADA). OBJECTIVE This study aims to assess the classification accuracy of six classical ML algorithms using a dataset of 668 patients from multiple hospitals. METHODS The dataset comprised measurements obtained from 668 patients, distributed among control, ADM, and ADA groups, collected from five distinct hospitals between 2011 and 2022. For classification purposes, six classical ML algorithms were employed: support vector machine, Bayesian linear discriminant analysis, decision tree, Gaussian Naïve Bayes, K-nearest neighbor and random forest. RESULTS The RF algorithm exhibited outstanding performance, achieving a remarkable balanced accuracy of 93.55% for ADA classification and 93.25% for ADM classification. The consistent reliability in distinguishing ADA and ADM patients underscores the potential of the EEG-based approach for AD diagnosis. CONCLUSIONS By leveraging a dataset sourced from multiple hospitals and encompassing a substantial patient cohort, coupled with the straightforwardness of the implemented models, it is feasible to attain notably robust results in AD classification.
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Affiliation(s)
| | | | - Alejandro L Borja
- School of Industrial Engineering, University of Castilla-La Mancha, Albacete, Spain
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Morteza Ghazali S, Alizadeh M, Mazloum J, Baleghi Y. Modified binary salp swarm algorithm in EEG signal classification for epilepsy seizure detection. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103858] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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Li M, Zhang P, Yang G, Xu G, Guo M, Liao W. A fisher linear discriminant analysis classifier fused with naïve Bayes for simultaneous detection in an asynchronous brain-computer interface. J Neurosci Methods 2022; 371:109496. [DOI: 10.1016/j.jneumeth.2022.109496] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 01/10/2022] [Accepted: 02/06/2022] [Indexed: 11/16/2022]
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Abdulhussien AS, AbdulSaddaa AT, Iqbal K. Automatic seizure detection with different time delays using SDFT and time-domain feature extraction. J Biomed Res 2022; 36:48-57. [PMID: 35403610 PMCID: PMC8894282 DOI: 10.7555/jbr.36.20210124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022] Open
Affiliation(s)
- Amal S. Abdulhussien
- Communication Technical Engineering College, Al-Furat Al-Awsat Technical University, Al-Najaf 54001, Iraq
- Amal Salman Abdulhussien, Communication Technical Engineering College, Al-Furat Al-Awsat Technical University, abylon-najaf street, Al-Najaf 540001, Iraq. Tel: +964-771-674-2333. E-mail:
| | - Ahmad T. AbdulSaddaa
- Communication Technical Engineering College, Al-Furat Al-Awsat Technical University, Al-Najaf 54001, Iraq
| | - Kamran Iqbal
- Department of System Engineering, University of Arkansas at Little Rock, Little Rock, AR 72204, USA
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Khalil AA, E Ibrahim F, Abbass MY, Haggag N, Mahrous Y, Sedik A, Elsherbeeny Z, Khalaf AAM, Rihan M, El-Shafai W, El-Banby GM, Soltan E, Soliman NF, Algarni AD, Al-Hanafy W, El-Fishawy AS, El-Rabaie ESM, Al-Nuaimy W, Dessouky MI, Saleeb AA, Messiha NW, El-Dokany IM, El-Bendary MAM, Abd El-Samie FE. Efficient anomaly detection from medical signals and images with convolutional neural networks for Internet of medical things (IoMT) systems. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2022; 38:e3530. [PMID: 34506081 DOI: 10.1002/cnm.3530] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 09/07/2021] [Indexed: 06/13/2023]
Abstract
Deep learning is one of the most promising machine learning techniques that revolutionalized the artificial intelligence field. The known traditional and convolutional neural networks (CNNs) have been utilized in medical pattern recognition applications that depend on deep learning concepts. This is attributed to the importance of anomaly detection (AD) in automatic diagnosis systems. In this paper, the AD is performed on medical electroencephalography (EEG) signal spectrograms and medical corneal images for Internet of medical things (IoMT) systems. Deep learning based on the CNN models is employed for this task with training and testing phases. Each input image passes through a series of convolution layers with different kernel filters. For the classification task, pooling and fully-connected layers are utilized. Computer simulation experiments reveal the success and superiority of the proposed models for automated medical diagnosis in IoMT systems.
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Affiliation(s)
- Ali A Khalil
- Department of Electronics and Communications, Faculty of Engineering, Minia University, Minia, Egypt
| | - Fatma E Ibrahim
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Mohamed Y Abbass
- Engineering Department, Nuclear Research Center, Atomic Energy Authority, Cairo, Egypt
| | - Nehad Haggag
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Yasser Mahrous
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Ahmed Sedik
- Department of the Robotics and Intelligent Machines, Faculty of Artificial Intelligence, Kafrelsheikh University, Kafrelsheikh, Egypt
| | - Zeinab Elsherbeeny
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Ashraf A M Khalaf
- Department of Electronics and Communications, Faculty of Engineering, Minia University, Minia, Egypt
| | - Mohamad Rihan
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
- University of Cassino and Southern Lazio, Italy
| | - Walid El-Shafai
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Ghada M El-Banby
- Department of Industrial Electronics and Control Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Eman Soltan
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Naglaa F Soliman
- Department of Information Technology, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, Riyadh 84428, Riyadh 11671, Saudi Arabia
| | - Abeer D Algarni
- Department of Information Technology, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, Riyadh 84428, Riyadh 11671, Saudi Arabia
| | - Waleed Al-Hanafy
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Adel S El-Fishawy
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - El-Sayed M El-Rabaie
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Waleed Al-Nuaimy
- Department of Electrical Engineering and Electronics, The University of Liverpool, Liverpool, UK
| | - Moawad I Dessouky
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Adel A Saleeb
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Nagy W Messiha
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Ibrahim M El-Dokany
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Mohsen A M El-Bendary
- Department of Electronics Technology, Faculty of Technology and Education, Helwan University, Cairo, Egypt
| | - Fathi E Abd El-Samie
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
- Department of Information Technology, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, Riyadh 84428, Riyadh 11671, Saudi Arabia
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14
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Automatic detection for epileptic seizure using graph-regularized nonnegative matrix factorization and Bayesian linear discriminate analysis. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.08.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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15
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Obukhov YV, Kershner IA, Tolmacheva RA, Sinkin MV, Zhavoronkova LA. Wavelet Ridges in EEG Diagnostic Features Extraction: Epilepsy Long-Time Monitoring and Rehabilitation after Traumatic Brain Injury. SENSORS (BASEL, SWITZERLAND) 2021; 21:5989. [PMID: 34577198 PMCID: PMC8468146 DOI: 10.3390/s21185989] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/13/2021] [Revised: 08/29/2021] [Accepted: 09/03/2021] [Indexed: 01/06/2023]
Abstract
Interchannel EEG synchronization, as well as its violation, is an important diagnostic sign of a number of diseases. In particular, during an epileptic seizure, such synchronization occurs starting from some pairs of channels up to many pairs in a generalized seizure. Additionally, for example, after traumatic brain injury, the destruction of interneuronal connections occurs, which leads to a violation of interchannel synchronization when performing motor or cognitive tests. Within the framework of a unified approach to the analysis of interchannel EEG synchronization using the ridges of wavelet spectra, two problems were solved. First, the segmentation of the initial data of long-term monitoring of scalp EEG with various artifacts into fragments suspicious of epileptic seizures in order to reduce the total duration of the fragments analyzed by the doctor. Second, assessments of recovery after rehabilitation of cognitive functions in patients with moderate traumatic brain injury. In the first task, the initial EEG was segmented into fragments in which at least two channels were synchronized, and by the adaptive threshold method into fragments with a high value of the EEG power spectral density. Overlapping in time synchronized fragments with fragments of high spectral power density was determined. As a result, the total duration of the fragments for analysis by the doctor was reduced by more than 60 times. In the second task, the network of phase-related EEG channels was determined during the cognitive test before and after rehabilitation. Calculation-logical and spatial-pattern cognitive tests were used. The positive dynamics of rehabilitation was determined during the initialization of interhemispheric connections and connections in the frontal cortex of the brain.
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Affiliation(s)
- Yury Vladimirovich Obukhov
- Kotelnikov Institute of Radio Engineering and Electronics of RAS, Mokhovaya St. 11-7, 125009 Moscow, Russia; (Y.V.O.); (R.A.T.)
| | - Ivan Andreevich Kershner
- Kotelnikov Institute of Radio Engineering and Electronics of RAS, Mokhovaya St. 11-7, 125009 Moscow, Russia; (Y.V.O.); (R.A.T.)
| | - Renata Alekseevna Tolmacheva
- Kotelnikov Institute of Radio Engineering and Electronics of RAS, Mokhovaya St. 11-7, 125009 Moscow, Russia; (Y.V.O.); (R.A.T.)
| | - Mikhail Vladimirovich Sinkin
- Department of Neurosurgery of the Sklifosovsky Research Institute for Emergency Medicine of Moscow Healthcare Department, Bolshaya Sukharevskaya Square 3, 129090 Moscow, Russia; or
- Laboratory of Invasive Neurointerfaces of the Research Institute TechnoBioMed, A.I. Yevdokimov Moscow State University of Medicine and Dentistry, Delegatskaya St. 20 p.1, 127473 Moscow, Russia
| | - Ludmila Alekseevna Zhavoronkova
- Laboratory of General and Clinical Neurophysiology of the Institute of Higher Nervous Activity and Neurophysiology of RAS, Butlerova St. 5a, 117485 Moscow, Russia; or
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16
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Samal D, Dash PK, Bisoi R. Automatic identification of epileptic seizure signal using optimized added kernel support vector machine (OAKSVM). Neural Comput Appl 2021. [DOI: 10.1007/s00521-020-05675-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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17
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Burrello A, Benatti S, Schindler K, Benini L, Rahimi A. An Ensemble of Hyperdimensional Classifiers: Hardware-Friendly Short-Latency Seizure Detection With Automatic iEEG Electrode Selection. IEEE J Biomed Health Inform 2021; 25:935-946. [PMID: 32894725 DOI: 10.1109/jbhi.2020.3022211] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
We propose a new algorithm for detecting epileptic seizures. Our algorithm first extracts three features, namely mean amplitude, line length, and local binary patterns that are fed to an ensemble of classifiers using hyperdimensional (HD) computing. These features are embedded into prototype vectors representing ictal (during seizures) and interictal (between seizures) brain states are constructed. These vectors can be computed at different spatial scales ranging from a single electrode up to many electrodes. This flexibility allows our algorithm to identify the electrodes that discriminate best between ictal and interictal brain states. We assess our algorithm on the SWEC-ETHZ iEEG dataset that includes 99 short-time iEEG seizures recorded with 36 to 100 electrodes from 16 drug-resistant epilepsy patients. Using k-fold cross-validation and all electrodes, our algorithm surpasses state-of-the-art algorithms yielding significantly shorter latency (8.81 s vs. 11.57 s) in seizure onset detection, and higher specificity (97.31% vs. 94.84%) and accuracy (96.85% vs. 95.42%). We can further reduce the latency of our algorithm to 3.74 s by allowing a slightly higher percentage of false alarms (2% specificity loss). Using only the top 10% of the electrodes ranked by our algorithm, we still maintain superior latency, sensitivity, and specificity compared to the other algorithms with all the electrodes. We finally demonstrate the suitability of our algorithm to deployment on low-cost embedded hardware platforms, thanks to its robustness to noise/artifacts affecting the signal, its low computational complexity, and the small memory-footprint on a RISC-V microcontroller.
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18
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Yao X, Li X, Ye Q, Huang Y, Cheng Q, Zhang GQ. A robust deep learning approach for automatic classification of seizures against non-seizures. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2020.102215] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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19
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Ma D, Yuan S, Shang J, Liu J, Dai L, Kong X, Xu F. The Automatic Detection of Seizure Based on Tensor Distance And Bayesian Linear Discriminant Analysis. Int J Neural Syst 2021; 31:2150006. [PMID: 33522459 DOI: 10.1142/s0129065721500064] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Electroencephalogram (EEG) plays an important role in recording brain activity to diagnose epilepsy. However, it is not only laborious, but also not very cost effective for medical experts to manually identify the features on EEG. Therefore, automatic seizure detection in accordance with the EEG recordings is significant for the diagnosis and treatment of epilepsy. Here, a new method for detecting seizures using tensor distance (TD) is proposed. First, the time-frequency characteristics of EEG signals are obtained by wavelet transformation, and the tensor representation of EEG signals is then obtained. Tucker decomposition is used to obtain the principal components of the EEG tensor. After, the distances between different categories of EEG tensors are calculated as the EEG features. Finally, the TD features are classified through the Bayesian Linear Discriminant Analysis (Bayesian LDA) classifier. The performance of this method is measured by the sensitivity, specificity, and recognition accuracy. Results indicate 95.12% sensitivity, 97.60% specificity, 97.60% recognition accuracy, and a false detection rate of 0.76 per hour in the invasive EEG dataset, which included 566.57[Formula: see text]h of EEG recording data from 21 patients. Taken together, the results show that TD has a good detection effect for seizure classification and that this method has high computational speed and great potential for real-time diagnosis.
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Affiliation(s)
- Delu Ma
- School of Computer Science, Qufu Normal University, Rizhao, Shandong 276826, P. R. China
| | - Shasha Yuan
- School of Computer Science, Qufu Normal University, Rizhao, Shandong 276826, P. R. China
| | - Junliang Shang
- School of Computer Science, Qufu Normal University, Rizhao, Shandong 276826, P. R. China
| | - Jinxing Liu
- School of Computer Science, Qufu Normal University, Rizhao, Shandong 276826, P. R. China
| | - Lingyun Dai
- School of Computer Science, Qufu Normal University, Rizhao, Shandong 276826, P. R. China
| | - Xiangzhen Kong
- School of Computer Science, Qufu Normal University, Rizhao, Shandong 276826, P. R. China
| | - Fangzhou Xu
- Department of Physics, School of Electronic and Information Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, Shandong 250353, P. R. China
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20
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The Primary Aldosteronism Surgical Outcome Score for the Prediction of Clinical Outcomes After Adrenalectomy for Unilateral Primary Aldosteronism. Ann Surg 2020; 272:1125-1132. [PMID: 30672800 DOI: 10.1097/sla.0000000000003200] [Citation(s) in RCA: 67] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
OBJECTIVE To develop a prediction model for clinical outcomes after unilateral adrenalectomy for unilateral primary aldosteronism. SUMMARY BACKGROUND DATA Unilateral primary aldosteronism is the most common surgically curable form of endocrine hypertension. Surgical resection of the dominant overactive adrenal in unilateral primary aldosteronism results in complete clinical success with resolution of hypertension without antihypertensive medication in less than half of patients with a wide between-center variability. METHODS A linear discriminant analysis model was built using data of 380 patients treated by adrenalectomy for unilateral primary aldosteronism to classify postsurgical clinical outcomes. The total cohort was then randomly divided into training (280 patients) and test (100 patients) datasets to create and validate a score system to predict clinical outcomes. An online tool (Primary Aldosteronism Surgical Outcome predictor) was developed to facilitate the use of the predictive score. RESULTS Six presurgical factors associated with complete clinical success (known duration of hypertension, sex, antihypertensive medication dosage, body mass index, target organ damage, and size of largest nodule at imaging) were selected based on classification performance in the linear discriminant analysis model. A 25-point predictive score was built with an optimal cut-off of greater than 16 points (accuracy of prediction = 79.2%; specificity = 84.4%; sensitivity = 71.3%) with an area under the curve of 0.839. CONCLUSIONS The predictive score and the primary aldosteronism surgical outcome predictor can be used in a clinical setting to differentiate patients who are likely to be clinically cured after surgery from those who will need continuous surveillance after surgery due to persistent hypertension.
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21
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Delgado JMC, Achanccaray D, Villota ER, Chevallier S. Riemann-Based Algorithms Assessment for Single- and Multiple-Trial P300 Classification in Non-Optimal Environments. IEEE Trans Neural Syst Rehabil Eng 2020; 28:2754-2761. [PMID: 33296306 DOI: 10.1109/tnsre.2020.3043418] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
The P300 wave is commonly used in Brain-Computer Interface technology due to its higher bit rates when compared to other BCI paradigms. P300 classification pipelines based on Riemannian Geometry provide accuracies on par with state-of-the-art pipelines, without having the need for spatial filters, and also possess the ability to be calibrated with little data. In this study, five different P300 detection pipelines are compared, with three of them using Riemannian Geometry as either feature extraction or classification algorithms. The goal of this study is to assess the viability of Riemannian Geometry-based methods in non-optimal environments with sudden background noise changes, rather than maximizing classification accuracy values. For fifteen subjects, the average single-trial accuracy obtained for each pipeline was: 56.06% for Linear Discriminant Analysis (LDA), 72.13% for Bayesian Linear Discriminant Analysis (BLDA), 63.56% for Riemannian Minimum Distance to Mean (MDM), 69.22% for Riemannian Tangent Space with Logistic Regression (TS-LogR), and 63.30% for Riemannian Tangent Space with Support Vector Machine (TS-SVM). The results are higher for the pipelines based on BLDA and TS-LogR, suggesting that they could be viable methods for the detection of the P300 component when maximizing the bit rate is needed. For multiple-trial classification, the BLDA pipeline converged faster towards higher average values, closely followed by the TS-LogR pipeline. The two remaining Riemannian methods' accuracy also increases with the number of trials, but towards a lower value compared to the aforementioned ones. Single-stimulus detection metrics revealed that the TS-LogR pipeline can be a viable classification method, as its results are only slightly lower than those obtained with BLDA. P300 waveforms were also analyzed to check for evidence of the component being elicited. Finally, a questionnaire was used to retrieve the most intuitive focusing methods employed by the subjects.
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22
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An Epilepsy Detection Method Using Multiview Clustering Algorithm and Deep Features. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2020; 2020:5128729. [PMID: 32802149 PMCID: PMC7416238 DOI: 10.1155/2020/5128729] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 07/08/2020] [Indexed: 11/17/2022]
Abstract
The automatic detection of epilepsy is essentially the classification of EEG signals of seizures and nonseizures, and its purpose is to distinguish the different characteristics of seizure brain electrical signals and normal brain electrical signals. In order to improve the effect of automatic detection, this study proposes a new classification method based on unsupervised multiview clustering results. In addition, considering the high-dimensional characteristics of the original data samples, a deep convolutional neural network (DCNN) is introduced to extract the sample features to obtain deep features. The deep feature reduces the sample dimension and increases the sample separability. The main steps of our proposed novel EEG detection method contain the following three steps: first, a multiview FCM clustering algorithm is introduced, and the training samples are used to train the center and weight of each view. Then, the class center and weight of each view obtained by training are used to calculate the view-weighted membership value of the new prediction sample. Finally, the classification label of the new prediction sample is obtained. Experimental results show that the proposed method can effectively detect seizures.
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23
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Channel and Feature Selection for a Motor Imagery-Based BCI System Using Multilevel Particle Swarm Optimization. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2020; 2020:8890477. [PMID: 32802031 PMCID: PMC7416234 DOI: 10.1155/2020/8890477] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Revised: 07/08/2020] [Accepted: 07/11/2020] [Indexed: 11/18/2022]
Abstract
Brain-computer interface (BCI) is a communication and control system linking the human brain and computers or other electronic devices. However, irrelevant channels and misleading features unrelated to tasks limit classification performance. To address these problems, we propose an efficient signal processing framework based on particle swarm optimization (PSO) for channel and feature selection, channel selection, and feature selection. Modified Stockwell transforms were used for a feature extraction, and multilevel hybrid PSO-Bayesian linear discriminant analysis was applied to optimization and classification. The BCI Competition III dataset I was used here to confirm the superiority of the proposed scheme. Compared to a method without optimization (89% accuracy), the best classification accuracy of the PSO-based scheme was 99% when less than 10.5% of the original features were used, the test time was reduced by more than 90%, and it achieved Kappa values and F-score of 0.98 and 98.99%, respectively, and better signal-to-noise ratio, thereby outperforming existing algorithms. The results show that the channel and feature selection scheme can accelerate the speed of convergence to the global optimum and reduce the training time. As the proposed framework can significantly improve classification performance, effectively reduce the number of features, and greatly shorten the test time, it can serve as a reference for related real-time BCI application system research.
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24
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Zhang B, Zhou Z, Jiang J. A 36-Class Bimodal ERP Brain-Computer Interface Using Location-Congruent Auditory-Tactile Stimuli. Brain Sci 2020; 10:brainsci10080524. [PMID: 32781712 PMCID: PMC7464701 DOI: 10.3390/brainsci10080524] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Revised: 08/03/2020] [Accepted: 08/04/2020] [Indexed: 11/16/2022] Open
Abstract
To date, traditional visual-based event-related potential brain-computer interface (ERP-BCI) systems continue to dominate the mainstream BCI research. However, these conventional BCIs are unsuitable for the individuals who have partly or completely lost their vision. Considering the poor performance of gaze independent ERP-BCIs, it is necessary to study techniques to improve the performance of these BCI systems. In this paper, we developed a novel 36-class bimodal ERP-BCI system based on tactile and auditory stimuli, in which six-virtual-direction audio files produced via head related transfer functions (HRTF) were delivered through headphones and location-congruent electro-tactile stimuli were simultaneously delivered to the corresponding position using electrodes placed on the abdomen and waist. We selected the eight best channels, trained a Bayesian linear discriminant analysis (BLDA) classifier and acquired the optimal trial number for target selection in online process. The average online information transfer rate (ITR) of the bimodal ERP-BCI reached 11.66 bit/min, improvements of 35.11% and 36.69% compared to the auditory (8.63 bit/min) and tactile approaches (8.53 bit/min), respectively. The results demonstrate the performance of the bimodal system is superior to each unimodal system. These facts indicate that the proposed bimodal system has potential utility as a gaze-independent BCI in future real-world applications.
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Affiliation(s)
- Boyang Zhang
- College of Intelligence Science and Technology, National University of Defense Technology, Changsha 410073, China;
| | - Zongtan Zhou
- College of Intelligence Science and Technology, National University of Defense Technology, Changsha 410073, China;
- Correspondence: ; Tel.: +86-159-7313-4693
| | - Jing Jiang
- National Key Laboratory of Human Factors Engineering, China Astronaut Research and Training Center, Beijing 100094, China;
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Lian J, Shi Y, Zhang Y, Jia W, Fan X, Zheng Y. Revealing False Positive Features in Epileptic EEG Identification. Int J Neural Syst 2020; 30:2050017. [DOI: 10.1142/s0129065720500173] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Feature selection plays a vital role in the detection and discrimination of epileptic seizures in electroencephalogram (EEG) signals. The state-of-the-art EEG classification techniques commonly entail the extraction of the multiple features that would be fed into classifiers. For some techniques, the feature selection strategies have been used to reduce the dimensionality of the entire feature space. However, most of these approaches focus on the performance of classifiers while neglecting the association between the feature and the EEG activity itself. To enhance the inner relationship between the feature subset and the epileptic EEG task with a promising classification accuracy, we propose a machine learning-based pipeline using a novel feature selection algorithm built upon a knockoff filter. First, a number of temporal, spectral, and spatial features are extracted from the raw EEG signals. Second, the proposed feature selection algorithm is exploited to obtain the optimal subgroup of features. Afterwards, three classifiers including [Formula: see text]-nearest neighbor (KNN), random forest (RF) and support vector machine (SVM) are used. The experimental results on the Bonn dataset demonstrate that the proposed approach outperforms the state-of-the-art techniques, with accuracy as high as 99.93% for normal and interictal EEG discrimination and 98.95% for interictal and ictal EEG classification. Meanwhile, it has achieved satisfactory sensitivity (95.67% in average), specificity (98.83% in average), and accuracy (98.89% in average) over the Freiburg dataset.
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Affiliation(s)
- Jian Lian
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
- Department of Electrical Engineering and Information Technology, Shandong University of Science and Technology, Jinan 250031, P. R. China
| | - Yunfeng Shi
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Yan Zhang
- Department of Electrical Engineering and Information Technology, Shandong University of Science and Technology, Jinan 250031, P. R. China
| | - Weikuan Jia
- School of Information Science and Engineering, Shandong Normal University, Jinan 250358, P. R. China
| | - Xiaojun Fan
- Antai College of Economics and Management, Shanghai Jiaotong University, Shanghai 200240, P. R. China
| | - Yuanjie Zheng
- School of Information Science and Engineering, Shandong Normal University, Key Lab of Intelligent Computing and Information Security in Universities of Shandong, Institute of Life Sciences, Shandong Provincial Key Laboratory for Distributed Computer Software and Novel Technologies, and Key Lab of Intelligent Information Processing, Jinan 250358, P. R. China
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Burrello A, Schindler K, Benini L, Rahimi A. Hyperdimensional Computing With Local Binary Patterns: One-Shot Learning of Seizure Onset and Identification of Ictogenic Brain Regions Using Short-Time iEEG Recordings. IEEE Trans Biomed Eng 2020; 67:601-613. [DOI: 10.1109/tbme.2019.2919137] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Hussain L, Saeed S, Idris A, Awan IA, Shah SA, Majid A, Ahmed B, Chaudhary QA. Regression analysis for detecting epileptic seizure with different feature extracting strategies. BIOMED ENG-BIOMED TE 2019; 64:619-642. [PMID: 31145684 DOI: 10.1515/bmt-2018-0012] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2018] [Accepted: 01/08/2019] [Indexed: 11/15/2022]
Abstract
Due to the excitability of neurons in the brain, a neurological disorder is produced known as epilepsy. The brain activity of patients suffering from epilepsy is monitored through electroencephalography (EEG). The multivariate nature of features from time domain, frequency domain, complexity and wavelet entropy based, and the statistical features were extracted from healthy and epileptic subjects using the Bonn University database and seizure and non-seizure intervals using the CHB MIT database. The robust machine learning regression methods based on regression, support vector regression (SVR), regression tree (RT), ensemble regression, Gaussian process regression (GPR) were employed for detecting and predicting epileptic seizures. Performance was measured in terms of root mean square error (RMSE), squared error, mean square error (MSE) and mean absolute error (MAE). Moreover, detailed optimization was performed using a RT to predict the selected features from each feature category. A deeper analysis was conducted on features and tree regression methods where optimal RMSE and MSE results were obtained. The best optimal performance was obtained using the ensemble boosted regression tree (BRT) and exponential GPR with an RMSE of 0.47, an MSE (0.22), an R Square (RS) (0.25) and an MAE (0.30) using the Bonn University database and support vector machine (SVM) fine Gaussian with RMSE (0.63634), RS (0.03), MSE (0.40493) and MAE (0.31744); squared exponential GPR and rational quadratic GPR with an RMSE of 0.63841, an RS (0.03), an MSE (0.40757) and an MAE (0.3472) was obtained using the CHB MIT database. A further deeper analysis for the prediction of selected features was performed on an RT to compute the optimal feasible point, observed and estimated function values, function evaluation time, objective function evaluation time and overall elapsed time.
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Affiliation(s)
- Lal Hussain
- Department of Computer Sciences and Information Technology, The University of Azad Jammu and Kashmir, Muzaffarabad 13100, Azad Kashmir, Pakistan, E-mail:
| | - Sharjil Saeed
- Department of Computer Sciences and Information Technology, The University of Azad Jammu and Kashmir, Muzaffarabad 13100, Azad Kashmir, Pakistan
| | - Adnan Idris
- Department of Computer Sciences and Information Technology, The University of Poonch, Rawalakot 12350, Azad Kashmir, Pakistan
| | - Imtiaz Ahmed Awan
- Department of Computer Sciences and Information Technology, The University of Azad Jammu and Kashmir, Muzaffarabad 13100, Azad Kashmir, Pakistan
| | - Saeed Arif Shah
- Department of Computer Sciences and Information Technology, The University of Azad Jammu and Kashmir, Muzaffarabad 13100, Azad Kashmir, Pakistan.,College of Computing and Informatics, Saudi Electronic University, Riyadh 11673, Saudi Arabia
| | - Abdul Majid
- Department of Computer Sciences and Information Technology, The University of Azad Jammu and Kashmir, Muzaffarabad 13100, Azad Kashmir, Pakistan
| | - Bilal Ahmed
- Department of Computer Sciences and Information Technology, The University of Azad Jammu and Kashmir, Muzaffarabad 13100, Azad Kashmir, Pakistan
| | - Quratul-Ain Chaudhary
- Department of Computer Sciences and Information Technology, The University of Azad Jammu and Kashmir, Muzaffarabad 13100, Azad Kashmir, Pakistan
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29
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Sun C, Cui H, Zhou W, Nie W, Wang X, Yuan Q. Epileptic Seizure Detection with EEG Textural Features and Imbalanced Classification Based on EasyEnsemble Learning. Int J Neural Syst 2019; 29:1950021. [DOI: 10.1142/s0129065719500217] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Imbalance data classification is a challenging task in automatic seizure detection from electroencephalogram (EEG) recordings when the durations of non-seizure periods are much longer than those of seizure activities. An imbalanced learning model is proposed in this paper to improve the identification of seizure events in long-term EEG signals. To better represent the underlying microstructure distributions of EEG signals while preserving the non-stationary nature, discrete wavelet transform (DWT) and uniform 1D-LBP feature extraction procedure are introduced. A learning framework is then designed by the ensemble of weakly trained support vector machines (SVMs). Under-sampling is employed to split the imbalanced seizure and non-seizure samples into multiple balanced subsets where each of them is utilized to train an individual SVM classifier. The weak SVMs are incorporated to build a strong classifier which emphasizes seizure samples and in the meantime analyzing the imbalanced class distribution of EEG data. Final seizure detection results are obtained in a multi-level decision fusion process by considering temporal and frequency factors. The model was validated over two long-term and one short-term public EEG databases. The model achieved a [Formula: see text]-mean of 97.14% with respect to epoch-level assessment, an event-level sensitivity of 96.67%, and a false detection rate of 0.86/h on the long-term intracranial database. An epoch-level [Formula: see text]-mean of 95.28% and event-level false detection rate of 0.81/h were yielded over the long-term scalp database. The comparisons with 14 published methods demonstrated the improved detection performance for imbalanced EEG signals and the generalizability of the proposed model.
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Affiliation(s)
- Chengfa Sun
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, Jinan 250358, P. R. China
| | - Hui Cui
- Department of Computer Science and Information Technology, La Trobe University, Bundoora, VIC 3083, Australia
| | - Weidong Zhou
- School of Microelectronics, Shandong University, Jinan 250101, P. R. China
| | - Weiwei Nie
- Shandong Provincial Qianfoshan Hospital, Shandong First Medical University, Jinan 250014, P. R. China
| | - Xiuying Wang
- School of Computer Science, The University of Sydney, Sydney, NSW 2006, Australia
| | - Qi Yuan
- Shandong Province Key Laboratory of Medical Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, Jinan 250358, P. R. China
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Sharmila A, Geethanjali P. A review on the pattern detection methods for epilepsy seizure detection from EEG signals. ACTA ACUST UNITED AC 2019; 64:507-517. [PMID: 31026222 DOI: 10.1515/bmt-2017-0233] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2017] [Accepted: 12/05/2018] [Indexed: 11/15/2022]
Abstract
Over several years, research had been conducted for the detection of epileptic seizures to support an automatic diagnosis system to comfort the clinicians' encumbrance. In this regard, a number of research papers have been published for the identification of epileptic seizures. A thorough review of all these papers is required. So, an attempt has been made to review on the pattern detection methods for epilepsy seizure detection from EEG signals. More than 150 research papers have been discussed to determine the techniques for detecting epileptic seizures. Further, the literature review confirms that the pattern recognition techniques required to detect epileptic seizures varies across the electroencephalogram (EEG) datasets of different conditions. This is mostly owing to the fact that EEG detected under different conditions have different characteristics. This consecutively necessitates the identification of the pattern recognition technique to efficiently differentiate EEG epileptic data from the EEG data of various conditions.
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Affiliation(s)
- Ashok Sharmila
- School of Electrical Engineering, Vellore Institute of Technology, Vellore 632014, Tamilnadu, India
| | - Purusothaman Geethanjali
- School of Electrical Engineering, Vellore Institute of Technology, Vellore 632014, Tamilnadu, India
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Liu G, Zhou W, Geng M. Automatic Seizure Detection Based on S-Transform and Deep Convolutional Neural Network. Int J Neural Syst 2019; 30:1950024. [DOI: 10.1142/s0129065719500242] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Automatic seizure detection is significant for the diagnosis of epilepsy and reducing the massive workload of reviewing continuous EEGs. In this work, a novel approach, combining Stockwell transform (S-transform) with deep Convolutional Neural Networks (CNN), is proposed to detect seizure onsets in long-term intracranial EEG recordings. Primarily, raw EEG data is filtered with wavelet decomposition. Then, S-transform is used to obtain a proper time-frequency representation of each EEG segment. After that, a 15-layer deep CNN using dropout and batch normalization serves as a robust feature extractor and classifier. Finally, smoothing and collar technique are applied to the outputs of CNN to improve the detection accuracy and reduce the false detection rate (FDR). The segment-based and event-based evaluation assessments and receiver operating characteristic (ROC) curves are employed for the performance evaluation on a public EEG database containing 21 patients. A segment-based sensitivity of 97.01% and a specificity of 98.12% are yielded. For the event-based assessment, this method achieves a sensitivity of 95.45% with an FDR of 0.36/h.
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Affiliation(s)
- Guoyang Liu
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Weidong Zhou
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Minxing Geng
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
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32
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Tian X, Deng Z, Ying W, Choi KS, Wu D, Qin B, Wang J, Shen H, Wang S. Deep Multi-View Feature Learning for EEG-Based Epileptic Seizure Detection. IEEE Trans Neural Syst Rehabil Eng 2019; 27:1962-1972. [PMID: 31514144 DOI: 10.1109/tnsre.2019.2940485] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Epilepsy is a neurological illness caused by abnormal discharge of brain neurons, where epileptic seizure can lead to life-threatening emergencies. By analyzing the encephalogram (EEG) signals of patients with epilepsy, their conditions can be monitored and seizure can be detected and intervened in time. As the identification of effective features in EEG signals is important for accurate seizure detection, this paper proposes a multi-view deep feature extraction method in attempt to achieve this goal. The method first uses fast Fourier transform (FFT) and wavelet packet decomposition (WPD) to construct the initial multi-view features. Convolutional neural network (CNN) is then used to automatically learn deep features from the initial multi-view features, which reduces the dimensionality and obtain the features with better seizure identification ability. Furthermore, the multi-view Takagi-Sugeno-Kang fuzzy system (MV-TSK-FS), an interpretable rule-based classifier, is used to construct a classification model with strong generalizability based on the deep multi-view features obtained. Experimental studies show that the classification accuracy of the proposed multi-view deep feature extraction method is at least 1% higher than that of common feature extraction methods such as principal component analysis (PCA), FFT and WPD. The classification accuracy is also at least 4% higher than the average accuracy achieved with single-view deep features.
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33
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Automated detection of epileptic seizures using successive decomposition index and support vector machine classifier in long-term EEG. Neural Comput Appl 2019. [DOI: 10.1007/s00521-019-04389-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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34
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Kaur A, Verma K, Bhondekar AP, Shashvat K. Implementation of Bagged SVM Ensemble Model for Classification of Epileptic States Using EEG. Curr Pharm Biotechnol 2019; 20:755-765. [PMID: 31258079 DOI: 10.2174/1389201020666190618112715] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2019] [Revised: 06/03/2019] [Accepted: 06/15/2019] [Indexed: 11/22/2022]
Abstract
BACKGROUND To decipher EEG (Electroencephalography), intending to locate inter-ictal and ictal discharges for supporting the diagnoses of epilepsy and locating the seizure focus, is a critical task. The aim of this work was to find how the ensemble model distinguishes between two different sets of problems which are group 1: inter-ictal and ictal, group 2: controlled and inter-ictal using approximate entropy as a parameter. METHODS This work addresses the classification problem for two groups; Group 1: "inter-ictal vs. ictal" for which case 1(C-E), and case 2(D-E) are included and Group 2; "activity from controlled vs. inter-ictal activity" considering four cases which are case 3 (A-C), case 4(B-C), case 5 (A-D) and case 6(B-D) respectively. To divide the EEG into sub-bands, DWT (Discrete Wavelet Transform) was used and approximate Entropy was extracted out of all the five sub-bands of EEG for each case. Bagged SVM was used to classify the different groups considered. RESULTS The highest accuracy for Group 1 using Bagged SVM Ensemble model for case 1 was observed to be 96.83% with testing data; which was similar to 97% achieved by using training data. For case 2 (D-E) 93.92% accuracy with training and 84.83% with testing data were obtained. For Group 2, there was a large disparity between SVM and Bagged Ensemble model, where 76%, 81.66%, 72.835% and 71.16% for case 3, case 4, case 5 and case 6 were obtained. While for training data set, 92.87%, 91.74%, 92% and 92.64% accuracy was attained, respectively. The results obtained by SVM for Group 2 showed a huge difference from the highest accuracy achieved by bagged SVM for both the training and the test data. CONCLUSION Bagged Ensemble model outperformed SVM model for every case with a huge difference with both training as well as test dataset for Group 2 and marginally better for Group 1.
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Affiliation(s)
| | - Karan Verma
- National Institute of Technology, New Delhi, India
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35
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Abstract
Automatic seizure detection is extremely important in the monitoring and diagnosis of epilepsy. The paper presents a novel method based on dictionary pair learning (DPL) for seizure detection in the long-term intracranial electroencephalogram (EEG) recordings. First, for the EEG data, wavelet filtering and differential filtering are applied, and the kernel function is performed to make the signal linearly separable. In DPL, the synthesis dictionary and analysis dictionary are learned jointly from original training samples with alternating minimization method, and sparse coefficients are obtained by using of linear projection instead of costly [Formula: see text]-norm or [Formula: see text]-norm optimization. At last, the reconstructed residuals associated with seizure and nonseizure sub-dictionary pairs are calculated as the decision values, and the postprocessing is performed for improving the recognition rate and reducing the false detection rate of the system. A total of 530[Formula: see text]h from 20 patients with 81 seizures were used to evaluate the system. Our proposed method has achieved an average segment-based sensitivity of 93.39%, specificity of 98.51%, and event-based sensitivity of 96.36% with false detection rate of 0.236/h.
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Affiliation(s)
- Xin Ma
- School of Information Science and Engineering, Shandong University, Jinan 250100, P. R. China
| | - Nana Yu
- School of Information Science and Engineering, Shandong University, Jinan 250100, P. R. China
| | - Weidong Zhou
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
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36
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Dümpelmann M. Early seizure detection for closed loop direct neurostimulation devices in epilepsy. J Neural Eng 2019; 16:041001. [DOI: 10.1088/1741-2552/ab094a] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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37
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Detection of Seizure Event and Its Onset/Offset Using Orthonormal Triadic Wavelet Based Features. Ing Rech Biomed 2019. [DOI: 10.1016/j.irbm.2018.12.002] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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38
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Mahmoodian N, Boese A, Friebe M, Haddadnia J. Epileptic seizure detection using cross-bispectrum of electroencephalogram signal. Seizure 2019; 66:4-11. [DOI: 10.1016/j.seizure.2019.02.001] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Revised: 01/31/2019] [Accepted: 02/02/2019] [Indexed: 10/27/2022] Open
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Vijay Anand S, Shantha Selvakumari R. Noninvasive method of epileptic detection using DWT and generalized regression neural network. Soft comput 2018. [DOI: 10.1007/s00500-018-3630-y] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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40
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Sriraam N, Tamanna K, Narayan L, Khanum M, Raghu S, Hegde AS, Kumar AB. Multichannel EEG based inter-ictal seizures detection using Teager energy with backpropagation neural network classifier. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2018; 41:1047-1055. [DOI: 10.1007/s13246-018-0694-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2018] [Accepted: 10/09/2018] [Indexed: 10/28/2022]
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41
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Sriraam N, Raghu S, Tamanna K, Narayan L, Khanum M, Hegde AS, Kumar AB. Automated epileptic seizures detection using multi-features and multilayer perceptron neural network. Brain Inform 2018; 5:10. [PMID: 30175391 PMCID: PMC6170940 DOI: 10.1186/s40708-018-0088-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2018] [Accepted: 08/10/2018] [Indexed: 11/12/2022] Open
Abstract
Detection of epileptic seizure activities from long-term multi-channel electroencephalogram (EEG) signals plays a significant role in the timely treatment of the patients with epilepsy. Visual identification of epileptic seizure in long-term EEG is cumbersome and tedious for neurologists, which might also lead to human error. Therefore, an automated tool for accurate detection of seizures in a long-term multi-channel EEG is essential for the clinical diagnosis. This study proposes an algorithm using multi-features and multilayer perceptron neural network (MLPNN) classifier. After appropriate approval from the ethical committee, recordings of EEG data were collected from the Institute of Neurosciences, Ramaiah Memorial College and Hospital, Bengaluru. Initially, preprocessing was performed to remove the power-line noise and motion artifacts. Four features, namely power spectral density (Yule–Walker), entropy (Shannon and Renyi), and Teager energy, were extracted. The Wilcoxon rank-sum test and descriptive analysis ensure the suitability of the proposed features for pattern classification. Single and multi-features were fed to the MLPNN classifier to evaluate the performance of the study. The simulation results showed sensitivity, specificity, and false detection rate of 97.1%, 97.8%, and 1 h−1, respectively, using multi-features. Further, the results indicate the proposed study is suitable for real-time seizure recognition from multi-channel EEG recording. The graphical user interface was developed in MATLAB to provide an automated biomarker for normal and epileptic EEG signals.
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Affiliation(s)
- N Sriraam
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India.
| | - S Raghu
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - Kadeeja Tamanna
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - Leena Narayan
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - Mehraj Khanum
- Centre for Medical Electronics and Computing, Ramaiah Institute of Technology (Affiliated to VTU Belgaum), Bengaluru, India
| | - A S Hegde
- Institute of Neuroscience, Ramaiah Medical College and Hospitals, Bengaluru, India
| | - Anjani Bhushan Kumar
- Institute of Neuroscience, Ramaiah Medical College and Hospitals, Bengaluru, India
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43
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Yuan Q, Zhou W, Xu F, Leng Y, Wei D. Epileptic EEG Identification via LBP Operators on Wavelet Coefficients. Int J Neural Syst 2018; 28:1850010. [DOI: 10.1142/s0129065718500107] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The automatic identification of epileptic electroencephalogram (EEG) signals can give assistance to doctors in diagnosis of epilepsy, and provide the higher security and quality of life for people with epilepsy. Feature extraction of EEG signals determines the performance of the whole recognition system. In this paper, a novel method using the local binary pattern (LBP) based on the wavelet transform (WT) is proposed to characterize the behavior of EEG activities. First, the WT is employed for time–frequency decomposition of EEG signals. After that, the “uniform” LBP operator is carried out on the wavelet-based time–frequency representation. And the generated histogram is regarded as EEG feature vector for the quantification of the textural information of its wavelet coefficients. The LBP features coupled with the support vector machine (SVM) classifier can yield the satisfactory recognition accuracies of 98.88% for interictal and ictal EEG classification and 98.92% for normal, interictal and ictal EEG classification on the publicly available EEG dataset. Moreover, the numerical results on another large size EEG dataset demonstrate that the proposed method can also effectively detect seizure events from multi-channel raw EEG data. Compared with the standard LBP, the “uniform” LBP can obtain the much shorter histogram which greatly reduces the computational burden of classification and enables it to detect ictal EEG signals in real time.
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Affiliation(s)
- Qi Yuan
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, Jinan 250014, P. R. China
| | - Weidong Zhou
- School of Microelectronics, Shandong University, Jinan 250101, P. R. China
| | - Fangzhou Xu
- School of Electrical Engineering and Automation, Qilu University of Technology, Jinan 250353, P. R. China
| | - Yan Leng
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, Jinan 250014, P. R. China
| | - Dongmei Wei
- Shandong Province Key Laboratory of Medical, Physics and Image Processing Technology, School of Physics and Electronics, Shandong Normal University, Jinan 250014, P. R. China
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44
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Qiu Y, Zhou W, Yu N, Du P. Denoising Sparse Autoencoder-Based Ictal EEG Classification. IEEE Trans Neural Syst Rehabil Eng 2018; 26:1717-1726. [PMID: 30106681 DOI: 10.1109/tnsre.2018.2864306] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Automatic seizure detection technology can automatically mark the EEG by using the epileptic detection algorithm, which is helpful to the diagnosis and treatment of epileptic diseases. This paper presents an EEG classification framework based on the denoising sparse autoencoder. The denoising sparse autoencoder (DSAE) is an improved unsupervised deep neural network over sparse autoencoder and denoising autoencoder, which can learn the closest representation of the data. The sparsity constraint applied in the hidden layer of the network makes the expression of data as sparse as possible so as to obtain a more efficient representation of EEG signals. In addition, corrupting operation used in input data help to enhance the robustness of the system and make it suitable for the analysis of non-stationary epileptic EEG signals. In this paper, we first imported the pre-processed training data to the DSAE network and trained the network. A logistic regression classifier was connected to the top of the DSAE. Then, put the test data into the system for classification. Finally, the output results of the overall network were post-processed to obtain the final epilepsy detection results. In the two-class (nonseizure and seizure EEGs) problem, the system has achieved effective results with the average sensitivity of 100%, specificity of 100%, and recognition of 100%, showing that the proposed framework can be efficient for the classification of epileptic EEGs.
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45
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Paul Y. Various epileptic seizure detection techniques using biomedical signals: a review. Brain Inform 2018; 5:6. [PMID: 29987692 PMCID: PMC6170938 DOI: 10.1186/s40708-018-0084-z] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Accepted: 06/27/2018] [Indexed: 12/04/2022] Open
Abstract
Epilepsy is a chronic chaos of the central nervous system that influences individual’s daily life by putting it at risk due to repeated seizures. Epilepsy affects more than 2% people worldwide of which developing countries are affected worse. A seizure is a transient irregularity in the brain’s electrical activity that produces disturbing physical symptoms such as a lapse in attention and memory, a sensory illusion, etc. Approximately one out of every three patients have frequent seizures, despite treatment with multiple anti-epileptic drugs. According to a survey, population aged 65 or above in European Union is predicted to rise from 16.4% (2004) to 29.9% (2050) and also this tremendous increase in aged population is also predicted for other countries by 2050. In this paper, seizure detection techniques are classified as time, frequency, wavelet (time–frequency), empirical mode decomposition and rational function techniques. The aim of this review paper is to present state-of-the-art methods and ideas that will lead to valid future research direction in the field of seizure detection.
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Affiliation(s)
- Yash Paul
- School of Informatics, Eötvös Loránd University, Budapest, Hungary.
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46
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Akbarian B, Erfanian A. Automatic Seizure Detection Based on Nonlinear Dynamical Analysis of EEG Signals and Mutual Information. Basic Clin Neurosci 2018; 9:227-240. [PMID: 30519381 PMCID: PMC6276534 DOI: 10.32598/bcn.9.4.227] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2017] [Revised: 04/10/2017] [Accepted: 10/04/2017] [Indexed: 11/20/2022] Open
Abstract
Introduction: In this paper, nonlinear dynamical analysis based on Recurrence Quantification Analysis (RQA) is employed to characterize the nonlinear EEG dynamics. RQA can provide useful quantitative information on the regular, chaotic, or stochastic property of the underlying dynamics. Methods: We use the RQA-based measures as the quantitative features of the nonlinear EEG dynamics. Mutual Information (MI) was used to find the most relevant feature subset out of RQA-based features. The selected features were fed into an artificial neural network for grouping of EEG recordings to detect ictal, interictal, and healthy states. The performance of the proposed procedure was evaluated using a database for different classification cases. Results: The combination of five selected features based on MI achieved 100% accuracy, which demonstrates the superiority of the proposed method. Conclusion: The results showed that the nonlinear dynamical analysis based on Rcurrence Quantification Analysis (RQA) can be employed as a suitable approach for characterizing the nonlinear EEG dynamics and detecting the seizure.
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Affiliation(s)
- Behnaz Akbarian
- Iran Neural Technology Research Centre, Iran University of Science and Technology, Tehran, Iran
| | - Abbas Erfanian
- Department of Bioelectrical Engineering, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
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47
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Jin J, Zhang L, Leng E, Metzger GJ, Koopmeiners JS. Detection of prostate cancer with multiparametric MRI utilizing the anatomic structure of the prostate. Stat Med 2018; 37:3214-3229. [PMID: 29923345 DOI: 10.1002/sim.7810] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2017] [Revised: 03/05/2018] [Accepted: 04/05/2018] [Indexed: 01/02/2023]
Abstract
Multiparametric magnetic resonance imaging (mpMRI), which combines traditional anatomic and newer quantitative MRI methods, has been shown to result in improved voxel-wise classification of prostate cancer as compared with any single MRI parameter. While these results are promising, substantial heterogeneity in the mpMRI parameter values and voxel-wise prostate cancer risk has been observed both between and within regions of the prostate. This suggests that classification of prostate cancer can potentially be improved by incorporating structural information into the classifier. In this paper, we propose a novel voxel-wise classifier of prostate cancer that accounts for the anatomic structure of the prostate by Bayesian hierarchical modeling, which can be combined with post hoc spatial Gaussian kernel smoothing to account for residual spatial correlation. Our proposed classifier results in significantly improved area under the ROC curve (0.822 vs 0.729, P < .001) and sensitivity corresponding to 90% specificity (0.599 vs 0.429, P < .001), compared with a baseline model that does not account for the anatomic structure of the prostate. Furthermore, the classifier can also be applied on voxels with missing mpMRI parameters, resulting in similar performance, which is an important practical consideration that cannot be easily accommodated using regression-based classifiers. In addition, our classifier achieved high computational efficiency with a closed-form solution for the posterior predictive cancer probability.
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Affiliation(s)
- Jin Jin
- Division of Biostatistics, School of Public Health, University of Minnesota, Minneapolis, MN 55455, USA
| | - Lin Zhang
- Division of Biostatistics, School of Public Health, University of Minnesota, Minneapolis, MN 55455, USA
| | - Ethan Leng
- Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Minneapolis, MN 55455, USA
| | - Gregory J Metzger
- Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Minneapolis, MN 55455, USA
| | - Joseph S Koopmeiners
- Division of Biostatistics, School of Public Health, University of Minnesota, Minneapolis, MN 55455, USA
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48
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Göksu H. EEG based epileptiform pattern recognition inside and outside the seizure states. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2018.03.004] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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49
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Raghu S, Sriraam N, Kumar GP, Hegde AS. A Novel Approach for Real-Time Recognition of Epileptic Seizures Using Minimum Variance Modified Fuzzy Entropy. IEEE Trans Biomed Eng 2018; 65:2612-2621. [PMID: 29993510 DOI: 10.1109/tbme.2018.2810942] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
OBJECTIVE Validation of epileptic seizures annotations from long-term electroencephalogram (EEG) recordings is a tough and tedious task for the neurological community. It is a well-known fact that computerized qualitative methods thoroughly assess the complex brain dynamics toward seizure detection and proven as one of the acceptable clinical indicators. METHODS This research study suggests a novel approach for real-time recognition of epileptic seizure from EEG recordings by a technique referred as minimum variance modified fuzzy entropy (MVMFzEn). Multichannel EEG recordings of 4.36 h of epileptic seizures and 25.74 h of normal EEG were considered. Signal processing techniques such as filters and independent component analysis were appropriated to reduce noise and artifacts. Unlike, the predefined fuzzy membership function, the modified fuzzy entropy utilizes relative energy as a membership function followed by scaling operation to obtain the feature. RESULTS Results revealed that MVMFzEn drops abruptly during an epileptic activity and this fact was used to set a threshold. An automated threshold derived from MVMFzEn assesses the classification efficiency of the given data during validation. It was observed from the results that the proposed method yields a classification accuracy of 100% without the use of any classifier. CONCLUSION The graphical user interface was designed in MATLAB to automatically label the normal and epileptic segments in the long-term EEG recordings. SIGNIFICANCE The ground truth clinical validation using validation specificity and validation sensitivity confirms the suitability of the proposed technique for automated annotation of epileptic seizures in real time.
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50
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Tzimourta KD, Tzallas AT, Giannakeas N, Astrakas LG, Tsalikakis DG, Tsipouras MG. Epileptic Seizures Classification Based on Long-Term EEG Signal Wavelet Analysis. PRECISION MEDICINE POWERED BY PHEALTH AND CONNECTED HEALTH 2018. [DOI: 10.1007/978-981-10-7419-6_28] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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