Automatic seizure detection based on imaged-EEG signals through fully convolutional networks

Seizure detection is a routine process in epilepsy units requiring manual intervention of well-trained specialists. This process could be extensive, inefficient and time-consuming, especially for long term recordings. We proposed an automatic method to detect epileptic seizures using an imaged-EEG representation of brain signals. To accomplish this, we analyzed EEG signals from two different datasets: the CHB-MIT Scalp EEG database and the EPILEPSIAE project that includes scalp and intracranial recordings. We used fully convolutional neural networks to automatically detect seizures. For our best model, we reached average accuracy and specificity values of 99.3% and 99.6%, respectively, for the CHB-MIT dataset, and corresponding values of 98.0% and 98.3% for the EPILEPSIAE patients. For these patients, the inclusion of intracranial electrodes together with scalp ones increased the average accuracy and specificity values to 99.6% and 58.3%, respectively. Regarding the other metrics, our best model reached average precision of 62.7%, recall of 58.3%, F-measure of 59.0% and AP of 54.5% on the CHB-MIT recordings, and comparatively lowers performances for the EPILEPSIAE dataset. For both databases, the number of false alarms per hour reached values less than 0.5/h for 92% of the CHB-MIT patients and less than 1.0/h for 80% of the EPILEPSIAE patients. Compared to recent studies, our lightweight approach does not need any estimation of pre-selected features and demonstrates high performances with promising possibilities for the introduction of such automatic methods in the clinical practice.

Wavelet Transform-Statistical Time Features-Based Methodology for Epileptic Seizure Prediction Using Electrocardiogram Signals

Epilepsy is a brain disorder that affects about 50 million persons around the world and is characterized by generating recurrent seizures, which can put patients in permanent because of falls, drowning, burns, and prolonged seizures that they can suffer. Hence, it is of vital importance to propose a methodology with the capability of predicting a seizure with several minutes before the onset, allowing that the patients take their precautions against injuries. In this regard, a methodology based on the wavelet packet transform (WPT), statistical time features (STFs), and a decision tree classifier (DTC) for predicting an epileptic seizure using electrocardiogram (ECG) signals is presented. Seventeen STFs were analyzed to measure changes in the properties of ECG signals and find characteristics capable of differentiating between healthy and 15 min prior to seizure signals. The effectiveness of the proposed methodology for predicting an epileptic event is demonstrated using a database of seven patients with 10 epileptic seizures, which was provided by the Massachusetts Institute of Technology–Beth Israel Hospital (MIT–BIH). The results show that the proposed methodology is capable of predicting an epileptic seizure 15 min before with an accuracy of 100%. Our results suggest that the use of STFs at frequency bands related to heart activity to find parameters for the prediction of epileptic seizures is suitable.

Deep Convolutional Neural Network Based Interictal-Preictal Electroencephalography Prediction: Application to Focal Cortical Dysplasia Type-II

We aimed to differentiate between the interictal and preictal states in epilepsy patients with focal cortical dysplasia (FCD) type-II using deep learning-based classifiers based on intracranial electroencephalography (EEG). We also investigated the practical conditions for high interictal-preictal discriminability in terms of spatiotemporal EEG characteristics and data size efficiency. Intracranial EEG recordings of nine epilepsy patients with FCD type-II (four female, five male; mean age: 10.7 years) were analyzed. Seizure onset and channel ranking were annotated by two epileptologists. We performed three consecutive interictal-preictal classification steps by varying the preictal length, number of electrodes, and sampling frequency with convolutional neural networks (CNN) using 30 s time-frequency data matrices. Classification performances were evaluated based on accuracy, F1 score, precision, and recall with respect to the above-mentioned three parameters. We found that (1) a 5 min preictal length provided the best classification performance, showing a remarkable enhancement of >13% on average compared to that with the 120 min preictal length; (2) four electrodes provided considerably high classification performance with a decrease of only approximately 1% on average compared to that with all channels; and (3) there was minimal performance change when quadrupling the sampling frequency from 128 Hz. Patient-specific performance variations were noticeable with respect to the preictal length, and three patients showed above-average performance enhancements of >28%. However, performance enhancements were low with respect to both the number of electrodes and sampling frequencies, and some patients showed at most 1–2% performance change. CNN-based classifiers from intracranial EEG recordings using a small number of electrodes and efficient sampling frequency are feasible for predicting the interictal-preictal state transition preceding seizures in epilepsy patients with FCD type-II. Preictal lengths affect the predictability in a patient-specific manner; therefore, pre-examinations for optimal preictal length will be helpful in seizure prediction.

From Seizure Detection to Smart and Fully Embedded Seizure Prediction Engine: A Review

Recent review papers have investigated seizure prediction, creating the possibility of preempting epileptic seizures. Correct seizure prediction can significantly improve the standard of living for the majority of epileptic patients, as the unpredictability of seizures is a major concern for them. Today, the development of algorithms, particularly in the field of machine learning, enables reliable and accurate seizure prediction using desktop computers. However, despite extensive research effort being devoted to developing seizure detection integrated circuits (ICs), dedicated seizure prediction ICs have not been developed yet. We believe that interdisciplinary study of system architecture, analog and digital ICs, and machine learning algorithms can promote the translation of scientific theory to a more realistic intelligent, integrated, and low-power system that can truly improve the standard of living for epileptic patients. This review explores topics ranging from signal acquisition analog circuits to classification algorithms and dedicated digital signal processing circuits for detection and prediction purposes, to provide a comprehensive and useful guideline for the construction, implementation and optimization of wearable and integrated smart seizure prediction systems.

Comparison of Frontal-Temporal Channels in Epilepsy Seizure Prediction Based on EEMD-ReliefF and DNN

Epilepsy patients who do not have their seizures controlled with medication or surgery live in constant fear. The psychological burden of uncertainty surrounding the occurrence of random seizures is one of the most stressful and debilitating aspects of the disease. Despite the research progress in this field, there is a need for a non-invasive prediction system that helps disrupt the seizure epileptiform. Electroencephalogram (EEG) signals are non-stationary, nonlinear and vary with each patient and every recording. Full use of the non-invasive electrode channels is impractical for real-time use. We propose two frontal-temporal electrode channels based on ensemble empirical mode decomposition (EEMD) and Relief methods to address these challenges. The EEMD decomposes the segmented data frame in the ictal state into its intrinsic mode functions, and then we apply Relief to select the most relevant oscillatory components. A deep neural network (DNN) model learns these features to perform seizure prediction and early detection of patient-specific EEG recordings. The model yields an average sensitivity and specificity of 86.7% and 89.5%, respectively. The two-channel model shows the ability to capture patterns from brain locations for non-fontal-temporal seizures.

Artificial Intelligence and Computational Approaches for Epilepsy

Studies on treatment of epilepsy have been actively conducted in multiple avenues, but there are limitations in improving its efficacy due to between-subject variability in which treatment outcomes vary from patient to patient. Accordingly, there is a growing interest in precision medicine that provides accurate diagnosis for seizure types and optimal treatment for an individual epilepsy patient. Among these approaches, computational studies making this feasible are rapidly progressing in particular and have been widely applied in epilepsy. These computational studies are being conducted in two main streams: 1) artificial intelligence-based studies implementing computational machines with specific functions, such as automatic diagnosis and prognosis prediction for an individual patient, using machine learning techniques based on large amounts of data obtained from multiple patients and 2) patient-specific modeling-based studies implementing biophysical in-silico platforms to understand pathological mechanisms and derive the optimal treatment for each patient by reproducing the brain network dynamics of the particular patient per se based on individual patient's data. These computational approaches are important as it can integrate multiple types of data acquired from patients and analysis results into a single platform. If these kinds of methods are efficiently operated, it would suggest a novel paradigm for precision medicine.

Convolutional neural network for detection and classification of seizures in clinical data

Epileptic seizure detection and classification in clinical electroencephalogram data still is a challenge, and only low sensitivity with a high rate of false positives has been achieved with commercially available seizure detection tools, which usually are patient non-specific. Epilepsy patients suffer from severe detrimental effects like physical injury or depression due to unpredictable seizures. However, even in hospitals due to the high rate of false positives, the seizure alert systems are of poor help for patients as tools of seizure detection are mostly trained on unrealistically clean data, containing little noise and obtained under controlled laboratory conditions, where patient groups are homogeneous, e.g. in terms of age or type of seizures. In this study authors present the approach for detection and classification of a seizure using clinical data of electroencephalograms and a convolutional neural network trained on features of brain synchronisation and power spectrum. Various deep learning methods were applied, and the network was trained on a very heterogeneous clinical electroencephalogram dataset. In total, eight different types of seizures were considered, and the patients were of various ages, health conditions and they were observed under clinical conditions. Despite this, the classifier presented in this paper achieved sensitivity and specificity equal to 0.68 and 0.67, accordingly, which is a significant improvement as compared to the known results for clinical data. Graphical abstract.

Deep Convolutional Neural Network-Based Epileptic Electroencephalogram (EEG) Signal Classification

Electroencephalogram (EEG) signals contain vital information on the electrical activities of the brain and are widely used to aid epilepsy analysis. A challenging element of epilepsy diagnosis, accurate classification of different epileptic states, is of particular interest and has been extensively investigated. A new deep learning-based classification methodology, namely epileptic EEG signal classification (EESC), is proposed in this paper. This methodology first transforms epileptic EEG signals to power spectrum density energy diagrams (PSDEDs), then applies deep convolutional neural networks (DCNNs) and transfer learning to automatically extract features from the PSDED, and finally classifies four categories of epileptic states (interictal, preictal duration to 30 min, preictal duration to 10 min, and seizure). It outperforms the existing epilepsy classification methods in terms of accuracy and efficiency. For instance, it achieves an average classification accuracy of over 90% in a case study with CHB-MIT epileptic EEG data.

Signal2Image Modules in Deep Neural Networks for EEG Classification

Deep learning has revolutionized computer vision utilizing the increased availability of big data and the power of parallel computational units such as graphical processing units. The vast majority of deep learning research is conducted using images as training data, however the biomedical domain is rich in physiological signals that are used for diagnosis and prediction problems. It is still an open research question how to best utilize signals to train deep neural networks.In this paper we define the term Signal2Image (S2Is) as trainable or non-trainable prefix modules that convert signals, such as Electroencephalography (EEG), to image-like representations making them suitable for training image-based deep neural networks defined as `base models'. We compare the accuracy and time performance of four S2Is (`signal as image', spectrogram, one and two layer Convolutional Neural Networks (CNNs)) combined with a set of `base models' (LeNet, AlexNet, VGGnet, ResNet, DenseNet) along with the depth-wise and 1D variations of the latter. We also provide empirical evidence that the one layer CNN S2I performs better in eleven out of fifteen tested models than non-trainable S2Is for classifying EEG signals and present visual comparisons of the outputs of some of the S2Is.

Deep Learning and Neurology: A Systematic Review

Deciphering the massive volume of complex electronic data that has been compiled by hospital systems over the past decades has the potential to revolutionize modern medicine, as well as present significant challenges. Deep learning is uniquely suited to address these challenges, and recent advances in techniques and hardware have poised the field of medical machine learning for transformational growth. The clinical neurosciences are particularly well positioned to benefit from these advances given the subtle presentation of symptoms typical of neurologic disease. Here we review the various domains in which deep learning algorithms have already provided impetus for change-areas such as medical image analysis for the improved diagnosis of Alzheimer's disease and the early detection of acute neurologic events; medical image segmentation for quantitative evaluation of neuroanatomy and vasculature; connectome mapping for the diagnosis of Alzheimer's, autism spectrum disorder, and attention deficit hyperactivity disorder; and mining of microscopic electroencephalogram signals and granular genetic signatures. We additionally note important challenges in the integration of deep learning tools in the clinical setting and discuss the barriers to tackling the challenges that currently exist.

Efficient Epileptic Seizure Prediction Based on Deep Learning

Epilepsy is one of the world's most common neurological diseases. Early prediction of the incoming seizures has a great influence on epileptic patients' life. In this paper, a novel patient-specific seizure prediction technique based on deep learning and applied to long-term scalp electroencephalogram (EEG) recordings is proposed. The goal is to accurately detect the preictal brain state and differentiate it from the prevailing interictal state as early as possible and make it suitable for real time. The features extraction and classification processes are combined into a single automated system. Raw EEG signal without any preprocessing is considered as the input to the system which further reduces the computations. Four deep learning models are proposed to extract the most discriminative features which enhance the classification accuracy and prediction time. The proposed approach takes advantage of the convolutional neural network in extracting the significant spatial features from different scalp positions and the recurrent neural network in expecting the incidence of seizures earlier than the current methods. A semi-supervised approach based on transfer learning technique is introduced to improve the optimization problem. A channel selection algorithm is proposed to select the most relevant EEG channels which makes the proposed system good candidate for real-time usage. An effective test method is utilized to ensure robustness. The achieved highest accuracy of 99.6% and lowest false alarm rate of 0.004 h ^{- 1} along with very early seizure prediction time of 1 h make the proposed method the most efficient among the state of the art.

Epilepsy Seizure Prediction on EEG Using Common Spatial Pattern and Convolutional Neural Network

Epilepsy seizure prediction paves the way of timely warning for patients to take more active and effective intervention measures. Compared to seizure detection that only identifies the inter-ictal state and the ictal state, far fewer researches have been conducted on seizure prediction because the high similarity makes it challenging to distinguish between the pre-ictal state and the inter-ictal state. In this paper, a novel solution on seizure prediction is proposed using common spatial pattern (CSP) and convolutional neural network (CNN). Firstly, artificial pre-ictal EEG signals based on the original ones are generated by combining the segmented pre-ictal signals to solve the trial imbalance problem between the two states. Secondly, a feature extractor employing wavelet packet decomposition and CSP is designed to extract the distinguishing features in both the time domain and the frequency domain. It can improve overall accuracy while reducing the training time. Finally, a shallow CNN is applied to discriminate between the pre-ictal state and the inter-ictal state. Our proposed solution is evaluated on 23 patients' data from Boston Children's Hospital-MIT scalp EEG dataset by employing a leave-one-out cross-validation, and it achieves a sensitivity of 92.2% and false prediction rate of 0.12/h. Experimental result demonstrates that the proposed approach outperforms most state-of-the-art methods.