101
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Mesin L. Estimation of Complexity of Sampled Biomedical Continuous Time Signals Using Approximate Entropy. Front Physiol 2018; 9:710. [PMID: 29942263 PMCID: PMC6004374 DOI: 10.3389/fphys.2018.00710] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2017] [Accepted: 05/22/2018] [Indexed: 11/13/2022] Open
Abstract
Non-linear analysis found many applications in biomedicine. Approximate entropy (ApEn) is a popular index of complexity often applied to biomedical data, as it provides quite stable indications when processing short and noisy epochs. However, ApEn strongly depends on parameters, which were chosen in the literature in wide ranges. This paper points out that ApEn depends on sampling rate of continuous time signals, embedding dimension, tolerance (under which a match is identified), epoch duration and low frequency trends. Moreover, contradicting results can be obtained changing parameters. This was found both in simulations and in experimental EEG. These limitations of ApEn suggest the introduction of an alternative index, here called modified ApEn, which is based on the following principles: oversampling is compensated, self-recurrences are ignored, a fixed percentage of recurrences is selected and low frequency trends are removed. The modified index allows to get more stable measurements of the complexity of the tested simulated data and EEG. The final conclusions are that, in order to get a reliable estimation of complexity using ApEn, parameters should be chosen within specific ranges, data must be sampled close to the Nyquist limit and low frequency trends should be removed. Following these indications, different studies could be more easily compared, interpreted and replicated. Moreover, the modified ApEn can be an interesting alternative, which extends the range of parameters for which stable indications can be achieved.
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Affiliation(s)
- Luca Mesin
- Mathematical Biology and Physiology, Dipartimento di Elettronica e Telecomunicazioni, Politecnico di Torino, Turin, Italy
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102
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Keshmiri S, Sumioka H, Yamazaki R, Ishiguro H. Differential Entropy Preserves Variational Information of Near-Infrared Spectroscopy Time Series Associated With Working Memory. Front Neuroinform 2018; 12:33. [PMID: 29922144 PMCID: PMC5996097 DOI: 10.3389/fninf.2018.00033] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2017] [Accepted: 05/15/2018] [Indexed: 12/14/2022] Open
Abstract
Neuroscience research shows a growing interest in the application of Near-Infrared Spectroscopy (NIRS) in analysis and decoding of the brain activity of human subjects. Given the correlation that is observed between the Blood Oxygen Dependent Level (BOLD) responses that are exhibited by the time series data of functional Magnetic Resonance Imaging (fMRI) and the hemoglobin oxy/deoxy-genation that is captured by NIRS, linear models play a central role in these applications. This, in turn, results in adaptation of the feature extraction strategies that are well-suited for discretization of data that exhibit a high degree of linearity, namely, slope and the mean as well as their combination, to summarize the informational contents of the NIRS time series. In this article, we demonstrate that these features are inefficient in capturing the variational information of NIRS data, limiting the reliability and the adequacy of the conclusion on their results. Alternatively, we propose the linear estimate of differential entropy of these time series as a natural representation of such information. We provide evidence for our claim through comparative analysis of the application of these features on NIRS data pertinent to several working memory tasks as well as naturalistic conversational stimuli.
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Affiliation(s)
- Soheil Keshmiri
- Hiroshi Ishiguro Laboratories, Advanced Telecommunications Research Institute International, Kyoto, Japan
| | - Hidenubo Sumioka
- Hiroshi Ishiguro Laboratories, Advanced Telecommunications Research Institute International, Kyoto, Japan
| | - Ryuji Yamazaki
- School of Social Sciences, Waseda University, Tokyo, Japan
| | - Hiroshi Ishiguro
- Hiroshi Ishiguro Laboratories, Advanced Telecommunications Research Institute International, Kyoto, Japan
- Graduate School of Engineering Science, Osaka University, Suita, Japan
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103
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Khurana V, Kumar P, Saini R, Roy PP. EEG based word familiarity using features and frequency bands combination. COGN SYST RES 2018. [DOI: 10.1016/j.cogsys.2017.11.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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104
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Hussain L. Detecting epileptic seizure with different feature extracting strategies using robust machine learning classification techniques by applying advance parameter optimization approach. Cogn Neurodyn 2018; 12:271-294. [PMID: 29765477 PMCID: PMC5943212 DOI: 10.1007/s11571-018-9477-1] [Citation(s) in RCA: 53] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Revised: 12/01/2017] [Accepted: 01/18/2018] [Indexed: 01/08/2023] Open
Abstract
Epilepsy is a neurological disorder produced due to abnormal excitability of neurons in the brain. The research reveals that brain activity is monitored through electroencephalogram (EEG) of patients suffered from seizure to detect the epileptic seizure. The performance of EEG detection based epilepsy require feature extracting strategies. In this research, we have extracted varying features extracting strategies based on time and frequency domain characteristics, nonlinear, wavelet based entropy and few statistical features. A deeper study was undertaken using novel machine learning classifiers by considering multiple factors. The support vector machine kernels are evaluated based on multiclass kernel and box constraint level. Likewise, for K-nearest neighbors (KNN), we computed the different distance metrics, Neighbor weights and Neighbors. Similarly, the decision trees we tuned the paramours based on maximum splits and split criteria and ensemble classifiers are evaluated based on different ensemble methods and learning rate. For training/testing tenfold Cross validation was employed and performance was evaluated in form of TPR, NPR, PPV, accuracy and AUC. In this research, a deeper analysis approach was performed using diverse features extracting strategies using robust machine learning classifiers with more advanced optimal options. Support Vector Machine linear kernel and KNN with City block distance metric give the overall highest accuracy of 99.5% which was higher than using the default parameters for these classifiers. Moreover, highest separation (AUC = 0.9991, 0.9990) were obtained at different kernel scales using SVM. Additionally, the K-nearest neighbors with inverse squared distance weight give higher performance at different Neighbors. Moreover, to distinguish the postictal heart rate oscillations from epileptic ictal subjects, and highest performance of 100% was obtained using different machine learning classifiers.
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Affiliation(s)
- Lal Hussain
- Quality Enhancement Cell (QEC), The University of Azad Jammu and Kashmir, City Campus, Muzaffarabad, Azad Kashmir 13100 Pakistan
- Department of Computer Science and IT, The University of Azad Jammu and Kashmir, City Campus, Muzaffarabad, 13100 Pakistan
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105
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Karthick P, Tanaka H, Khoo HM, Gotman J. Prediction of secondary generalization from a focal onset seizure in intracerebral EEG. Clin Neurophysiol 2018; 129:1030-1040. [DOI: 10.1016/j.clinph.2018.02.122] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2017] [Revised: 01/01/2018] [Accepted: 02/08/2018] [Indexed: 01/06/2023]
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106
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Liu X, Wang X, Zhou X, Jiang A. Appropriate use of the increment entropy for electrophysiological time series. Comput Biol Med 2018; 95:13-23. [PMID: 29433037 DOI: 10.1016/j.compbiomed.2018.01.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2017] [Revised: 01/23/2018] [Accepted: 01/23/2018] [Indexed: 10/18/2022]
Abstract
The increment entropy (IncrEn) is a new measure for quantifying the complexity of a time series. There are three critical parameters in the IncrEn calculation: N (length of the time series), m (dimensionality), and q (quantifying precision). However, the question of how to choose the most appropriate combination of IncrEn parameters for short datasets has not been extensively explored. The purpose of this research was to provide guidance on choosing suitable IncrEn parameters for short datasets by exploring the effects of varying the parameter values. We used simulated data, epileptic EEG data and cardiac interbeat (RR) data to investigate the effects of the parameters on the calculated IncrEn values. The results reveal that IncrEn is sensitive to changes in m, q and N for short datasets (N≤500). However, IncrEn reaches stability at a data length of N=1000 with m=2 and q=2, and for short datasets (N=100), it shows better relative consistency with 2≤m≤6 and 2≤q≤8 We suggest that the value of N should be no less than 100. To enable a clear distinction between different classes based on IncrEn, we recommend that m and q should take values between 2 and 4. With appropriate parameters, IncrEn enables the effective detection of complexity variations in physiological time series, suggesting that IncrEn should be useful for the analysis of physiological time series in clinical applications.
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Affiliation(s)
- Xiaofeng Liu
- College of IoT Engineering, Hohai University, Changzhou 213022, China; Changzhou Key Laboratory of Robotics and Intelligent Technology, Changzhou 213022, China; Jiangsu Key Laboratory of Special Robots (Hohai University), Changzhou 213022, China.
| | - Xue Wang
- College of Computer and Information, Hohai University, Nanjing 210098, China; School of Information and Engineering, Changzhou University, Changzhou 213164, China.
| | - Xu Zhou
- College of IoT Engineering, Hohai University, Changzhou 213022, China; Changzhou Key Laboratory of Robotics and Intelligent Technology, Changzhou 213022, China; Jiangsu Key Laboratory of Special Robots (Hohai University), Changzhou 213022, China.
| | - Aimin Jiang
- College of IoT Engineering, Hohai University, Changzhou 213022, China; Changzhou Key Laboratory of Robotics and Intelligent Technology, Changzhou 213022, China; Jiangsu Key Laboratory of Special Robots (Hohai University), Changzhou 213022, China.
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107
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Epileptic seizure detection using fuzzy-rules-based sub-band specific features and layered multi-class SVM. Pattern Anal Appl 2018. [DOI: 10.1007/s10044-018-0691-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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108
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Detection of epileptic seizure based on entropy analysis of short-term EEG. PLoS One 2018; 13:e0193691. [PMID: 29543825 PMCID: PMC5854404 DOI: 10.1371/journal.pone.0193691] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 02/19/2018] [Indexed: 11/19/2022] Open
Abstract
Entropy measures that assess signals’ complexity have drawn increasing attention recently in biomedical field, as they have shown the ability of capturing unique features that are intrinsic and physiologically meaningful. In this study, we applied entropy analysis to electroencephalogram (EEG) data to examine its performance in epilepsy detection based on short-term EEG, aiming at establishing a short-term analysis protocol with optimal seizure detection performance. Two classification problems were considered, i.e., 1) classifying interictal and ictal EEGs (epileptic group) from normal EEGs; and 2) classifying ictal from interictal EEGs. For each problem, we explored two protocols to analyze the entropy of EEG: i) using a single analytical window with different window lengths, and ii) using an average of multiple windows for each window length. Two entropy methods—fuzzy entropy (FuzzyEn) and distribution entropy (DistEn)–were used that have valid outputs for any given data lengths. We performed feature selection and trained classifiers based on a cross-validation process. The results show that performance of FuzzyEn and DistEn may complement each other and the best performance can be achieved by combining: 1) FuzzyEn of one 5-s window and the averaged DistEn of five 1-s windows for classifying normal from epileptic group (accuracy: 0.93, sensitivity: 0.91, specificity: 0.96); and 2) the averaged FuzzyEn of five 1-s windows and DistEn of one 5-s window for classifying ictal from interictal EEGs (accuracy: 0.91, sensitivity: 0.93, specificity: 0.90). Further studies are warranted to examine whether this proposed short-term analysis procedure can help track the epileptic activities in real time and provide prompt feedback for clinical practices.
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109
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Epilepsy and seizure characterisation by multifractal analysis of EEG subbands. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2017.12.006] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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110
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Lesenfants D, Habbal D, Chatelle C, Soddu A, Laureys S, Noirhomme Q. Toward an Attention-Based Diagnostic Tool for Patients With Locked-in Syndrome. Clin EEG Neurosci 2018; 49:122-135. [PMID: 27821482 DOI: 10.1177/1550059416674842] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Electroencephalography (EEG) has been proposed as a supplemental tool for reducing clinical misdiagnosis in severely brain-injured populations helping to distinguish conscious from unconscious patients. We studied the use of spectral entropy as a measure of focal attention in order to develop a motor-independent, portable, and objective diagnostic tool for patients with locked-in syndrome (LIS), answering the issues of accuracy and training requirement. Data from 20 healthy volunteers, 6 LIS patients, and 10 patients with a vegetative state/unresponsive wakefulness syndrome (VS/UWS) were included. Spectral entropy was computed during a gaze-independent 2-class (attention vs rest) paradigm, and compared with EEG rhythms (delta, theta, alpha, and beta) classification. Spectral entropy classification during the attention-rest paradigm showed 93% and 91% accuracy in healthy volunteers and LIS patients respectively. VS/UWS patients were at chance level. EEG rhythms classification reached a lower accuracy than spectral entropy. Resting-state EEG spectral entropy could not distinguish individual VS/UWS patients from LIS patients. The present study provides evidence that an EEG-based measure of attention could detect command-following in patients with severe motor disabilities. The entropy system could detect a response to command in all healthy subjects and LIS patients, while none of the VS/UWS patients showed a response to command using this system.
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Affiliation(s)
- Damien Lesenfants
- 1 Coma Science Group, GIGA-Research, CHU University Hospital of Liege, Liege, Belgium.,2 School of Engineering and Institute for Brain Science, Brown University, Providence, RI, USA.,3 Center for Neurorestoration and Neurotechnology, Rehabilitation R&D Service, Department of VA Medical Center, Providence, RI, USA
| | - Dina Habbal
- 1 Coma Science Group, GIGA-Research, CHU University Hospital of Liege, Liege, Belgium
| | - Camille Chatelle
- 1 Coma Science Group, GIGA-Research, CHU University Hospital of Liege, Liege, Belgium.,4 Department of Physical Medicine and Rehabilitation, Spaulding Rehabilitation Hospital, Harvard Medical School, Boston, MA, USA
| | - Andrea Soddu
- 1 Coma Science Group, GIGA-Research, CHU University Hospital of Liege, Liege, Belgium.,5 Brain and Mind Institute, Physics and Astronomy Department, University of Western Ontario, London, Ontario, Canada
| | - Steven Laureys
- 1 Coma Science Group, GIGA-Research, CHU University Hospital of Liege, Liege, Belgium
| | - Quentin Noirhomme
- 1 Coma Science Group, GIGA-Research, CHU University Hospital of Liege, Liege, Belgium.,6 Brain Innovation B.V., Maastricht, the Netherlands.,7 Faculty of Psychology and Neuroscience, Maastricht University, Maastricht, the Netherlands
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111
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Raghu S, Sriraam N, Kumar GP, Hegde AS. A Novel Approach for Real-Time Recognition of Epileptic Seizures Using Minimum Variance Modified Fuzzy Entropy. IEEE Trans Biomed Eng 2018; 65:2612-2621. [PMID: 29993510 DOI: 10.1109/tbme.2018.2810942] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
OBJECTIVE Validation of epileptic seizures annotations from long-term electroencephalogram (EEG) recordings is a tough and tedious task for the neurological community. It is a well-known fact that computerized qualitative methods thoroughly assess the complex brain dynamics toward seizure detection and proven as one of the acceptable clinical indicators. METHODS This research study suggests a novel approach for real-time recognition of epileptic seizure from EEG recordings by a technique referred as minimum variance modified fuzzy entropy (MVMFzEn). Multichannel EEG recordings of 4.36 h of epileptic seizures and 25.74 h of normal EEG were considered. Signal processing techniques such as filters and independent component analysis were appropriated to reduce noise and artifacts. Unlike, the predefined fuzzy membership function, the modified fuzzy entropy utilizes relative energy as a membership function followed by scaling operation to obtain the feature. RESULTS Results revealed that MVMFzEn drops abruptly during an epileptic activity and this fact was used to set a threshold. An automated threshold derived from MVMFzEn assesses the classification efficiency of the given data during validation. It was observed from the results that the proposed method yields a classification accuracy of 100% without the use of any classifier. CONCLUSION The graphical user interface was designed in MATLAB to automatically label the normal and epileptic segments in the long-term EEG recordings. SIGNIFICANCE The ground truth clinical validation using validation specificity and validation sensitivity confirms the suitability of the proposed technique for automated annotation of epileptic seizures in real time.
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112
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Mutlu AY. Detection of epileptic dysfunctions in EEG signals using Hilbert vibration decomposition. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2017.08.023] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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113
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Manis G, Aktaruzzaman M, Sassi R. Low Computational Cost for Sample Entropy. ENTROPY 2018; 20:e20010061. [PMID: 33265148 PMCID: PMC7512258 DOI: 10.3390/e20010061] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Revised: 12/24/2017] [Accepted: 01/09/2018] [Indexed: 11/23/2022]
Abstract
Sample Entropy is the most popular definition of entropy and is widely used as a measure of the regularity/complexity of a time series. On the other hand, it is a computationally expensive method which may require a large amount of time when used in long series or with a large number of signals. The computationally intensive part is the similarity check between points in m dimensional space. In this paper, we propose new algorithms or extend already proposed ones, aiming to compute Sample Entropy quickly. All algorithms return exactly the same value for Sample Entropy, and no approximation techniques are used. We compare and evaluate them using cardiac inter-beat (RR) time series. We investigate three algorithms. The first one is an extension of the kd-trees algorithm, customized for Sample Entropy. The second one is an extension of an algorithm initially proposed for Approximate Entropy, again customized for Sample Entropy, but also improved to present even faster results. The last one is a completely new algorithm, presenting the fastest execution times for specific values of m, r, time series length, and signal characteristics. These algorithms are compared with the straightforward implementation, directly resulting from the definition of Sample Entropy, in order to give a clear image of the speedups achieved. All algorithms assume the classical approach to the metric, in which the maximum norm is used. The key idea of the two last suggested algorithms is to avoid unnecessary comparisons by detecting them early. We use the term unnecessary to refer to those comparisons for which we know a priori that they will fail at the similarity check. The number of avoided comparisons is proved to be very large, resulting in an analogous large reduction of execution time, making them the fastest algorithms available today for the computation of Sample Entropy.
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Affiliation(s)
- George Manis
- Department of Computer Science and Engineering, University of Ioannina, Ioannina 45110, Greece
- Correspondence: ; Tel.: +30-2651-008-806
| | - Md Aktaruzzaman
- Department of Computer Science and Engineering, Islamic University Kushtia, Kushtia 7003, Bangladesh
| | - Roberto Sassi
- Dipartimento di Informatica, Università degli Studi di Milano, Crema 26013, Italy
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114
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Ibrahim S, Djemal R, Alsuwailem A. Electroencephalography (EEG) signal processing for epilepsy and autism spectrum disorder diagnosis. Biocybern Biomed Eng 2018. [DOI: 10.1016/j.bbe.2017.08.006] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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115
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Zhang T, Chen W, Li M. Fuzzy distribution entropy and its application in automated seizure detection technique. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2017.08.013] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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116
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An epileptic seizure detection system based on cepstral analysis and generalized regression neural network. Biocybern Biomed Eng 2018. [DOI: 10.1016/j.bbe.2018.01.002] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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117
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Epileptic seizure detection in EEG signal using machine learning techniques. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2017; 41:81-94. [PMID: 29264792 DOI: 10.1007/s13246-017-0610-y] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 12/07/2017] [Indexed: 10/18/2022]
Abstract
Epilepsy is a well-known nervous system disorder characterized by seizures. Electroencephalograms (EEGs), which capture brain neural activity, can detect epilepsy. Traditional methods for analyzing an EEG signal for epileptic seizure detection are time-consuming. Recently, several automated seizure detection frameworks using machine learning technique have been proposed to replace these traditional methods. The two basic steps involved in machine learning are feature extraction and classification. Feature extraction reduces the input pattern space by keeping informative features and the classifier assigns the appropriate class label. In this paper, we propose two effective approaches involving subpattern based PCA (SpPCA) and cross-subpattern correlation-based PCA (SubXPCA) with Support Vector Machine (SVM) for automated seizure detection in EEG signals. Feature extraction was performed using SpPCA and SubXPCA. Both techniques explore the subpattern correlation of EEG signals, which helps in decision-making process. SVM is used for classification of seizure and non-seizure EEG signals. The SVM was trained with radial basis kernel. All the experiments have been carried out on the benchmark epilepsy EEG dataset. The entire dataset consists of 500 EEG signals recorded under different scenarios. Seven different experimental cases for classification have been conducted. The classification accuracy was evaluated using tenfold cross validation. The classification results of the proposed approaches have been compared with the results of some of existing techniques proposed in the literature to establish the claim.
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118
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Madan S, Srivastava K, Sharmila A, Mahalakshmi P. A case study on Discrete Wavelet Transform based Hurst exponent for epilepsy detection. J Med Eng Technol 2017; 42:9-17. [DOI: 10.1080/03091902.2017.1394390] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Saiby Madan
- School of Electrical Engineering, VIT University, Vellore, Tamilnadu, India
| | - Kajri Srivastava
- School of Electrical Engineering, VIT University, Vellore, Tamilnadu, India
| | - A. Sharmila
- School of Electrical Engineering, VIT University, Vellore, Tamilnadu, India
| | - P. Mahalakshmi
- School of Electrical Engineering, VIT University, Vellore, Tamilnadu, India
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119
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SHARMA MANISH, PACHORI RAMBILAS. A NOVEL APPROACH TO DETECT EPILEPTIC SEIZURES USING A COMBINATION OF TUNABLE-Q WAVELET TRANSFORM AND FRACTAL DIMENSION. J MECH MED BIOL 2017. [DOI: 10.1142/s0219519417400036] [Citation(s) in RCA: 69] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The detection and quantification of seizures can be achieved through the analysis of nonstationary electroencephalogram (EEG) signals. The detection of these intractable seizures involving human beings is a challenging and difficult task. The analysis of EEG through human inspection is prone to errors and may lead to false conclusions. The computer-aided systems have been developed to assist neurophysiologists in the identification of seizure activities accurately. We propose a new machine learning and signal processing-based automated system that can detect epileptic episodes accurately. The proposed algorithm employs a promising time-frequency tool called tunable-Q wavelet transform (TQWT) to decompose EEG signals into various sub-bands (SBs). The fractal dimensions (FDs) of the SBs have been used as the discriminating features. The TQWT has many attractive features, such as tunable oscillatory attribute and time-invariance property, which are favorable for the analysis of nonstationary and transient signals. Fractal dimension is a nonlinear chaotic trait that has been proven to be very useful in the analysis and classifications of nonstationary signals including EEG. First, we decompose EEG signals into the desired SBs. Then, we compute FD for each SB. These FDs of the SBs have been applied to the least-squares support vector machine (LS-SVM) classifier with radial basis function (RBF) kernel. We have used 10-fold cross-validation to ensure reliable performance and avoid the possible over-fitting of the model. In the proposed study, we investigate the following four popular classification tasks (CTs) related to different classes of EEG signals: (i) normal versus seizure (ii) seizure-free versus seizure (iii) nonseizure versus Seizure (iv) normal versus seizure-free. The proposed model surpassed existing models in the area under the receiver operating characteristics (ROC) curve, Matthew’s correlation coefficient (MCC), average classification accuracy (ACA), and average classification sensitivity (ACS). The proposed system attained perfect 100% ACS for all CTs considered in this study. The method achieved the highest classification accuracy as well as the largest area under ROC curve (AUC) for all classes. The salient feature of our proposed model is that, though many models exist in the literature, which gave high ACA, however, their performance has not been evaluated using MCC and AUC along with ACA simultaneously. The evaluation of the performance in terms of only ACA which may be misleading. Hence, the performance of the proposed model has been assessed not only in terms of ACA but also in terms AUC and MCC. Moreover, the performance of the model has been found to be almost equivalent to a perfect model, and the performance of the proposed model surpasses the existing models for the CTs investigated by us. Therefore, the proposed model is expected to assist clinicians in analyzing seizures accurately in less time without any error.
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Affiliation(s)
- MANISH SHARMA
- Department of Electrical Engineering, Institute of Infrastructure, Technology Research and Management (IITRAM), Ahmedabad, India
| | - RAM BILAS PACHORI
- Discipline of Electrical Engineering, Indian Institute of Technology Indore, Indore 453552, India
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120
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Taran S, Bajaj V, Siuly S. An optimum allocation sampling based feature extraction scheme for distinguishing seizure and seizure-free EEG signals. Health Inf Sci Syst 2017; 5:7. [PMID: 29109857 DOI: 10.1007/s13755-017-0028-7] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 10/16/2017] [Indexed: 01/03/2023] Open
Abstract
Epileptic seizure is the common neurological disorder, which is generally identified by electroencephalogram (EEG) signals. In this paper, a new feature extraction methodology based on optimum allocation sampling (OAS) and Teager energy operator (TEO) is proposed for detection of seizure EEG signals. The OAS scheme selects the finite length homogeneous sequence from non-homogeneous recorded EEG signal. The trend of selected sequence by OAS is still non-linear, which is analyzed by non-linear operator TEO. The TEO convert non-linear but homogenous EEG sequence into amplitude-frequency modulated (AM-FM) components. The statistical measures of AM-FM components used as input features to least squares support vector machine classifier for classification of seizure and seizure-free EEG signals. The proposed methodology is evaluated on a benchmark epileptic seizure EEG database. The experimental results demonstrate that the proposed scheme has capability to effectively distinguish seizure and seizure-free EEG signals.
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Affiliation(s)
- Sachin Taran
- PDPM Indian Institute of Information Technology, Design and Manufacturing Jabalpur, Jabalpur, 482005 India
| | - Varun Bajaj
- PDPM Indian Institute of Information Technology, Design and Manufacturing Jabalpur, Jabalpur, 482005 India
| | - Siuly Siuly
- Centre for Applied Informatics, College of Engineering and Science, Victoria University, Melbourne, VIC Australia
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121
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Huvanandana J, Thamrin C, Tracy MB, Hinder M, Nguyen CD, McEwan AL. Advanced analyses of physiological signals in the neonatal intensive care unit. Physiol Meas 2017; 38:R253-R279. [DOI: 10.1088/1361-6579/aa8a13] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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122
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Sriraam N, Raghu S. Classification of Focal and Non Focal Epileptic Seizures Using Multi-Features and SVM Classifier. J Med Syst 2017; 41:160. [DOI: 10.1007/s10916-017-0800-x] [Citation(s) in RCA: 65] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2017] [Accepted: 08/14/2017] [Indexed: 11/29/2022]
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123
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Saraiva GFR, Ferreira AS, Souza GM. Osmotic stress decreases complexity underlying the electrophysiological dynamic in soybean. PLANT BIOLOGY (STUTTGART, GERMANY) 2017; 19:702-708. [PMID: 28449392 DOI: 10.1111/plb.12576] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2017] [Accepted: 04/11/2017] [Indexed: 05/19/2023]
Abstract
Studies on plant electrophysiology are mostly focused on specific traits of single cells. Inspired by the complexity of the signalling network in plants, and by analogy with neurons in human brains, we sought evidence of high complexity in the electrical dynamics of plant signalling and a likely relationship with environmental cues. An EEG-like standard protocol was adopted for high-resolution measurements of the electrical signal in Glycine max seedlings. The signals were continuously recorded in the same plants before and after osmotic stimuli with a -2 MPa mannitol solution. Non-linear time series analyses methods were used as follows: auto-correlation and cross-correlation function, power spectra density function, and complexity of the time series estimated as Approximate Entropy (ApEn). Using Approximate Entropy analysis we found that the level of temporal complexity of the electrical signals was affected by the environmental conditions, decreasing when the plant was subjected to a low osmotic potential. Electrical spikes observed only after stimuli followed a power law distribution, which is indicative of scale invariance. Our results suggest that changes in complexity of the electrical signals could be associated with water stress conditions in plants. We hypothesised that the power law distribution of the spikes could be explained by a self-organised critical state (SOC) after osmotic stress.
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Affiliation(s)
- G F R Saraiva
- Graduate Program in Agronomy, Western São Paulo University, (PPGA/UNOESTE), Presidente Prudente, Brazil
| | - A S Ferreira
- Department of Physics, Federal University of Pelotas (IFM/UFPel), Pelotas, Brazil
| | - G M Souza
- Department of Botany, Federal University of Pelotas (IB/UFPel), Pelotas, Brazil
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Tibdewal MN, Dey HR, Mahadevappa M, Ray A, Malokar M. Multiple entropies performance measure for detection and localization of multi-channel epileptic EEG. Biomed Signal Process Control 2017. [DOI: 10.1016/j.bspc.2017.05.002] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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125
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Jaiswal AK, Banka H. Local Transformed Features for Epileptic Seizure Detection in EEG Signal. J Med Biol Eng 2017. [DOI: 10.1007/s40846-017-0286-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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126
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Nguyen HT. Deep learning framework for detection of hypoglycemic episodes in children with type 1 diabetes. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2017; 2016:3503-3506. [PMID: 28269053 DOI: 10.1109/embc.2016.7591483] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Most Type 1 diabetes mellitus (T1DM) patients have hypoglycemia problem. Low blood glucose, also known as hypoglycemia, can be a dangerous and can result in unconsciousness, seizures and even death. In recent studies, heart rate (HR) and correct QT interval (QTc) of the electrocardiogram (ECG) signal are found as the most common physiological parameters to be effected from hypoglycemic reaction. In this paper, a state-of-the-art intelligent technology namely deep belief network (DBN) is developed as an intelligent diagnostics system to recognize the onset of hypoglycemia. The proposed DBN provides a superior classification performance with feature transformation on either processed or un-processed data. To illustrate the effectiveness of the proposed hypoglycemia detection system, 15 children with Type 1 diabetes were volunteered overnight. Comparing with several existing methodologies, the experimental results showed that the proposed DBN outperformed and achieved better classification performance.
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127
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Spike densities of the amygdala and neocortex reflect progression of kindled motor seizures. Med Biol Eng Comput 2017; 56:99-112. [PMID: 28674781 DOI: 10.1007/s11517-017-1672-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 06/15/2017] [Indexed: 10/19/2022]
Abstract
Amygdala kindling is a common temporal lobe-like seizure model. In the present study, temporal and spectral analyses of the ictal period were investigated throughout amygdala kindling in response to different behavioral seizures. Right-side amygdala was kindled to induce epileptiform afterdischarges (ADs). ADs of both the frontal cortex and amygdala were analyzed. Powers of the low (0-9 Hz)- and high (12-30 Hz)-frequency bands in response to different behavioral seizures were calculated. Densities of upward and downward peaks of spikes, which reflected information of spike count and spike pattern, throughout kindle-induced ADs were calculated. Progression was seen in the temporal and spectral characteristics of amygdala-kindled ADs in response to behaviors. Numbers of significant differences of all 1-s AD segments between two Racine's seizure stages were significantly higher in upward and downward indexes of the temporal spike than those using the spectral method in both the amygdala and neocortex. Ability for distinguishing seizure stages was significantly higher in temporal spike density of amygdala ADs compared to those of frontal ADs. Our results showed that amygdala kindling caused spectrotemporal changes of activities in the amygdala and frontal cortex. The density of spike-related peaks had better distinguishability in response to behavioral seizures, particularly in a seizure zone of amygdala. The present study provides a new temporal index of spike's peak density to understand progression of motor seizures in the kindling process.
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128
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Tiwari AK, Pachori RB, Kanhangad V, Panigrahi BK. Automated Diagnosis of Epilepsy Using Key-Point-Based Local Binary Pattern of EEG Signals. IEEE J Biomed Health Inform 2017; 21:888-896. [DOI: 10.1109/jbhi.2016.2589971] [Citation(s) in RCA: 149] [Impact Index Per Article: 18.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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129
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Hefron RG, Borghetti BJ, Christensen JC, Kabban CMS. Deep long short-term memory structures model temporal dependencies improving cognitive workload estimation. Pattern Recognit Lett 2017. [DOI: 10.1016/j.patrec.2017.05.020] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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130
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Automatic Detection of Epilepsy and Seizure Using Multiclass Sparse Extreme Learning Machine Classification. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2017; 2017:6849360. [PMID: 28706561 PMCID: PMC5494790 DOI: 10.1155/2017/6849360] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Accepted: 05/21/2017] [Indexed: 11/18/2022]
Abstract
An automatic detection system for distinguishing normal, ictal, and interictal electroencephalogram (EEG) signals is of great help in clinical practice. This paper presents a three-class classification system based on discrete wavelet transform (DWT) and the nonlinear sparse extreme learning machine (SELM) for epilepsy and epileptic seizure detection. Three-level lifting DWT using Daubechies order 4 wavelet is introduced to decompose EEG signals into delta, theta, alpha, and beta subbands. Considering classification accuracy and computational complexity, the maximum and standard deviation values of each subband are computed to create an eight-dimensional feature vector. After comparing five multiclass SELM strategies, the one-against-one strategy with the highest accuracy is chosen for the three-class classification system. The performance of the designed three-class classification system is tested with publicly available epilepsy dataset. The results show that the system achieves high enough classification accuracy by combining the SELM and DWT and reduces training and testing time by decreasing computational complexity and feature dimension. With excellent classification performance and low computation complexity, this three-class classification system can be utilized for practical epileptic EEG detection, and it offers great potentials for portable automatic epilepsy and seizure detection system in the future hardware implementation.
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131
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Abstract
This paper presents an accurate nonlinear classification method that can help physicians diagnose seizure in electroencephalographic (EEG) signal characterized by a disturbance in temporal and spectral content. This is accomplished by applying four steps. First, different EEG signals containing healthy, ictal and seizure-free (inter-ictal) activities are decomposed by empirical mode decomposition method. The instantaneous amplitudes and frequencies of resulted bands (intrinsic mode functions, IMF) are then tracked by the direct quadrature method (DQ). In contrast to other approaches, DQ cancels the effect of amplitude modulation on frequency calculation. The dissociation between instantaneous amplitude and frequency information is therefore fully achieved to avoid features confusion. Afterwards, the Shannon entropy values of both sets of instantaneous values (amplitudes and frequencies)—related to every IMF—are calculated. Finally, the obtained entropy values are classified by random forest tree. The proposed procedure yields 100% accuracy for (healthy)/(ictal) and 98.3–99.7% for (healthy)/(ictal)/(interictal) classification problems. The suggested method is hence robust, accurate, fast, user-friendly, data driven with open access interpretability.
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132
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Tunable-Q Wavelet Transform Based Multiscale Entropy Measure for Automated Classification of Epileptic EEG Signals. APPLIED SCIENCES-BASEL 2017. [DOI: 10.3390/app7040385] [Citation(s) in RCA: 106] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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133
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Jaiswal AK, Banka H. Epileptic seizure detection in EEG signal with GModPCA and support vector machine. Biomed Mater Eng 2017; 28:141-157. [PMID: 28372267 DOI: 10.3233/bme-171663] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
BACKGROUND AND OBJECTIVE Epilepsy is one of the most common neurological disorders caused by recurrent seizures. Electroencephalograms (EEGs) record neural activity and can detect epilepsy. Visual inspection of an EEG signal for epileptic seizure detection is a time-consuming process and may lead to human error; therefore, recently, a number of automated seizure detection frameworks were proposed to replace these traditional methods. Feature extraction and classification are two important steps in these procedures. Feature extraction focuses on finding the informative features that could be used for classification and correct decision-making. Therefore, proposing effective feature extraction techniques for seizure detection is of great significance. METHODS Principal Component Analysis (PCA) is a dimensionality reduction technique used in different fields of pattern recognition including EEG signal classification. Global modular PCA (GModPCA) is a variation of PCA. In this paper, an effective framework with GModPCA and Support Vector Machine (SVM) is presented for epileptic seizure detection in EEG signals. The feature extraction is performed with GModPCA, whereas SVM trained with radial basis function kernel performed the classification between seizure and nonseizure EEG signals. Seven different experimental cases were conducted on the benchmark epilepsy EEG dataset. The system performance was evaluated using 10-fold cross-validation. In addition, we prove analytically that GModPCA has less time and space complexities as compared to PCA. RESULTS The experimental results show that EEG signals have strong inter-sub-pattern correlations. GModPCA and SVM have been able to achieve 100% accuracy for the classification between normal and epileptic signals. Along with this, seven different experimental cases were tested. The classification results of the proposed approach were better than were compared the results of some of the existing methods proposed in literature. It is also found that the time and space complexities of GModPCA are less as compared to PCA. CONCLUSIONS This study suggests that GModPCA and SVM could be used for automated epileptic seizure detection in EEG signal.
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Affiliation(s)
- Abeg Kumar Jaiswal
- Department of Computer Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Haider Banka
- Department of Computer Science and Engineering, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
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134
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Jaiswal AK, Banka H. Local pattern transformation based feature extraction techniques for classification of epileptic EEG signals. Biomed Signal Process Control 2017. [DOI: 10.1016/j.bspc.2017.01.005] [Citation(s) in RCA: 56] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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135
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Patidar S, Panigrahi T. Detection of epileptic seizure using Kraskov entropy applied on tunable-Q wavelet transform of EEG signals. Biomed Signal Process Control 2017. [DOI: 10.1016/j.bspc.2017.01.001] [Citation(s) in RCA: 113] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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136
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Epileptic seizure detection in long-term EEG records using sparse rational decomposition and local Gabor binary patterns feature extraction. Knowl Based Syst 2017. [DOI: 10.1016/j.knosys.2016.11.023] [Citation(s) in RCA: 65] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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137
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Automatic Epileptic Seizure Detection in EEG Using Nonsubsampled Wavelet–Fourier Features. J Med Biol Eng 2017. [DOI: 10.1007/s40846-016-0214-0] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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138
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Wang X, Liu B, Xie L, Yu X, Li M, Zhang J. Cerebral and neural regulation of cardiovascular activity during mental stress. Biomed Eng Online 2016; 15:160. [PMID: 28155673 PMCID: PMC5260034 DOI: 10.1186/s12938-016-0255-1] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
Background Mental arithmetic has been verified inducing cerebral and cardiovascular responses. However, the mechanism and sequential responses are still ambiguous. This study aims to reveal the mechanism of cardiovascular and autonomic responses and the related scalp positions that regulate the autonomic nerves system (ANS) during MA task. Methods 34 healthy male subjects aged between 19 and 27 years old (mean age 23.6 ± 2.3 years) were recruited in. Electrocardiogram, impedance cardiography, beat-to-beat blood pressure and electroencephalography were measured simultaneously and continuously during the experiments. And the analysis of time–frequency, approximate entropy and Pearson correlation coefficient were adopted. For statistical comparison, paired t test is utilized in the study. Results The results showed that mental arithmetic task increased heart rate (from 72.35 ± 1.88 to 80.38 ± 2.34), blood pressure (systolic blood pressure: from 112.09 ± 3.23 to 126.79 ± 3.44; diastolic blood pressure: from 74.15 ± 1.93 to 81.20 ± 1.97), and cardiac output (from 8.71 ± 0.30 to 9.68 ± 0.35), and the mental arithmetic induced physiological responses could be divided into two stages, the first stage (10–110 s) and late stage (150–250 s). The high frequency power component (HF) of HRV decreased during MA, but the normalized low frequency power component (nLF) and LF/HF ratio of HRV increased only at the late stage. Moreover, during first stage, the correlations between approximate entropy of electroencephalography at Fp2, Fz, F4, F7 and the corresponding time–frequency results of HF were significant. During the late stage, the correlations between approximate entropy of electroencephalography at Fp2, Fz, C3, C4 and the corresponding nLF was significant. Conclusions Our results demonstrated that (1) mental stress induces time-dependent ANS activity and cardiovascular response. (2) Parasympathetic activity is lower during mental arithmetic task, but sympathetic nerve is activated only during late stage of mental arithmetic task. (3) Brain influences the cardiac activity through prefrontal and temporal cortex with the activation of ANS during mental arithmetic.
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Affiliation(s)
- Xiaoni Wang
- Key Laboratory of Biomedical Information Engineering of Education Ministry, Xi'an Jiaotong University, Xi'an, 710049, China
| | - Binbin Liu
- Key Laboratory of Biomedical Information Engineering of Education Ministry, Xi'an Jiaotong University, Xi'an, 710049, China
| | - Lin Xie
- Key Laboratory of Biomedical Information Engineering of Education Ministry, Xi'an Jiaotong University, Xi'an, 710049, China
| | - Xiaolin Yu
- Department of Information Engineering, Officers College of CAPF, Chengdu, 610213, China
| | - Mengjun Li
- Key Laboratory of Biomedical Information Engineering of Education Ministry, Xi'an Jiaotong University, Xi'an, 710049, China
| | - Jianbao Zhang
- Key Laboratory of Biomedical Information Engineering of Education Ministry, Xi'an Jiaotong University, Xi'an, 710049, China.
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139
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lin D, Vasilakos AV, Tang Y, Yao Y. Neural networks for computer-aided diagnosis in medicine: A review. Neurocomputing 2016. [DOI: 10.1016/j.neucom.2016.08.039] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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140
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Zhang T, Chen W. LMD Based Features for the Automatic Seizure Detection of EEG Signals Using SVM. IEEE Trans Neural Syst Rehabil Eng 2016; 25:1100-1108. [PMID: 27662677 DOI: 10.1109/tnsre.2016.2611601] [Citation(s) in RCA: 76] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Achieving the goal of detecting seizure activity automatically using electroencephalogram (EEG) signals is of great importance and significance for the treatment of epileptic seizures. To realize this aim, a newly-developed time-frequency analytical algorithm, namely local mean decomposition (LMD), is employed in the presented study. LMD is able to decompose an arbitrary signal into a series of product functions (PFs). Primarily, the raw EEG signal is decomposed into several PFs, and then the temporal statistical and non-linear features of the first five PFs are calculated. The features of each PF are fed into five classifiers, including back propagation neural network (BPNN), K-nearest neighbor (KNN), linear discriminant analysis (LDA), un-optimized support vector machine (SVM) and SVM optimized by genetic algorithm (GA-SVM), for five classification cases, respectively. Confluent features of all PFs and raw EEG are further passed into the high-performance GA-SVM for the same classification tasks. Experimental results on the international public Bonn epilepsy EEG dataset show that the average classification accuracy of the presented approach are equal to or higher than 98.10% in all the five cases, and this indicates the effectiveness of the proposed approach for automated seizure detection.
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141
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Classification of epileptic seizures using wavelet packet log energy and norm entropies with recurrent Elman neural network classifier. Cogn Neurodyn 2016; 11:51-66. [PMID: 28174612 DOI: 10.1007/s11571-016-9408-y] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2016] [Revised: 08/30/2016] [Accepted: 09/06/2016] [Indexed: 10/21/2022] Open
Abstract
Electroencephalogram shortly termed as EEG is considered as the fundamental segment for the assessment of the neural activities in the brain. In cognitive neuroscience domain, EEG-based assessment method is found to be superior due to its non-invasive ability to detect deep brain structure while exhibiting superior spatial resolutions. Especially for studying the neurodynamic behavior of epileptic seizures, EEG recordings reflect the neuronal activity of the brain and thus provide required clinical diagnostic information for the neurologist. This specific proposed study makes use of wavelet packet based log and norm entropies with a recurrent Elman neural network (REN) for the automated detection of epileptic seizures. Three conditions, normal, pre-ictal and epileptic EEG recordings were considered for the proposed study. An adaptive Weiner filter was initially applied to remove the power line noise of 50 Hz from raw EEG recordings. Raw EEGs were segmented into 1 s patterns to ensure stationarity of the signal. Then wavelet packet using Haar wavelet with a five level decomposition was introduced and two entropies, log and norm were estimated and were applied to REN classifier to perform binary classification. The non-linear Wilcoxon statistical test was applied to observe the variation in the features under these conditions. The effect of log energy entropy (without wavelets) was also studied. It was found from the simulation results that the wavelet packet log entropy with REN classifier yielded a classification accuracy of 99.70 % for normal-pre-ictal, 99.70 % for normal-epileptic and 99.85 % for pre-ictal-epileptic.
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142
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Wang Y, Qi Y, Wang Y, Lei Z, Zheng X, Pan G. Delving intoα-stable distribution in noise suppression for seizure detection from scalp EEG. J Neural Eng 2016; 13:056009. [DOI: 10.1088/1741-2560/13/5/056009] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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143
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Acoustic Detection of Coronary Occlusions before and after Stent Placement Using an Electronic Stethoscope. ENTROPY 2016. [DOI: 10.3390/e18080281] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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144
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Pattern recognition for electroencephalographic signals based on continuous neural networks. Neural Netw 2016; 79:88-96. [DOI: 10.1016/j.neunet.2016.03.004] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2015] [Revised: 03/09/2016] [Accepted: 03/11/2016] [Indexed: 11/24/2022]
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145
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Zhang Y, Liu B, Ji X, Huang D. Classification of EEG Signals Based on Autoregressive Model and Wavelet Packet Decomposition. Neural Process Lett 2016. [DOI: 10.1007/s11063-016-9530-1] [Citation(s) in RCA: 104] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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146
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Wulsin DF, Jensen ST, Litt B. Nonparametric multi-level clustering of human epilepsy seizures. Ann Appl Stat 2016. [DOI: 10.1214/15-aoas851] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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147
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Nataraj SK, Paulraj M, Bin Yaacob S, Adom AH. Statistical cross-correlation band features based thought controlled communication system. AI COMMUN 2016. [DOI: 10.3233/aic-160703] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Affiliation(s)
| | - M.P. Paulraj
- School of Mechatronic Engineering, Universiti Malaysia Perlis, Perlis, Malaysia
| | - Sazali Bin Yaacob
- Malaysian Spanish Institute, Universiti Kuala Lumpur, Kulim Hi-TechPark, 09000 Kulim, Kedah, Malaysia
| | - Abdul Hamid Adom
- School of Mechatronic Engineering, Universiti Malaysia Perlis, Perlis, Malaysia
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148
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Gao L, Smielewski P, Czosnyka M, Ercole A. Cerebrovascular Signal Complexity Six Hours after Intensive Care Unit Admission Correlates with Outcome after Severe Traumatic Brain Injury. J Neurotrauma 2016; 33:2011-2018. [PMID: 26916703 DOI: 10.1089/neu.2015.4228] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Disease states are associated with a breakdown in healthy interactions and are often characterized by reduced signal complexity. We applied approximate entropy (ApEn) analysis to investigate the correlation between the complexity of heart rate (ApEn-HR), mean arterial pressure (ApEn-MAP), intracranial pressure (ApEn-ICP), and a combined ApEn-product (product of the three individual ApEns) and outcome after traumatic brain injury. In 174 severe traumatic brain injured patients, we found significant differences across groups classified by the Glasgow Outcome Score in ApEn-HR (p = 0.007), ApEn-MAP (p = 0.02), ApEn-ICP (p = 0.01), ApEn-product (p = 0.001), and pressure reactivity index (PRx) (p = 0.004) in the first 6 h. This relationship strengthened in a 24 h and 72 h analysis (ApEn-MAP continued to correlate with death but was not correlated with favorable outcome). Outcome was dichotomized as survival versus death, and favorable versus unfavorable; the ApEn-product achieved the strongest statistical significance at 6 h (F = 11.0; p = 0.001 and F = 10.5; p = 0.001, respectively) and was a significant independent predictor of mortality and favorable outcome (p < 0.001). Patients in the lowest quartile for ApEn-product were over four times more likely to die (39.5% vs. 9.3%, p < 0.001) than those in the highest quartile. ApEn-ICP was inversely correlated with PRx (r = -0.39, p < 0.000001) indicating unique information related to impaired cerebral autoregulation. Our results demonstrate that as early as 6 h into monitoring, complexity measures from easily attainable vital signs, such as HR and MAP, in addition to ICP, can help triage those who require more intensive neurological management at an early stage.
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Affiliation(s)
- Lei Gao
- 1 Department of Anesthesia, Critical Care and Pain Medicine, Massachusetts General Hospital , Boston, Massachusetts
| | - Peter Smielewski
- 2 Division of Neurosurgery, Department of Anesthesia University of Cambridge , Cambridge, United Kingdom
| | - Marek Czosnyka
- 2 Division of Neurosurgery, Department of Anesthesia University of Cambridge , Cambridge, United Kingdom
| | - Ari Ercole
- 3 Neurosciences Critical Care Unit, Department of Anesthesia University of Cambridge , Cambridge, United Kingdom
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149
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Li P, Karmakar C, Yan C, Palaniswami M, Liu C. Classification of 5-S Epileptic EEG Recordings Using Distribution Entropy and Sample Entropy. Front Physiol 2016; 7:136. [PMID: 27148074 PMCID: PMC4830849 DOI: 10.3389/fphys.2016.00136] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2015] [Accepted: 03/29/2016] [Indexed: 12/02/2022] Open
Abstract
Epilepsy is an electrophysiological disorder of the brain, the hallmark of which is recurrent and unprovoked seizures. Electroencephalogram (EEG) measures electrical activity of the brain that is commonly applied as a non-invasive technique for seizure detection. Although a vast number of publications have been published on intelligent algorithms to classify interictal and ictal EEG, it remains an open question whether they can be detected using short-length EEG recordings. In this study, we proposed three protocols to select 5 s EEG segment for classifying interictal and ictal EEG from normal. We used the publicly-accessible Bonn database, which consists of normal, interical, and ictal EEG signals with a length of 4097 sampling points (23.6 s) per record. In this study, we selected three segments of 868 points (5 s) length from each recordings and evaluated results for each of them separately. The well-studied irregularity measure—sample entropy (SampEn)—and a more recently proposed complexity measure—distribution entropy (DistEn)—were used as classification features. A total of 20 combinations of input parameters m and τ for the calculation of SampEn and DistEn were selected for compatibility. Results showed that SampEn was undefined for half of the used combinations of input parameters and indicated a large intra-class variance. Moreover, DistEn performed robustly for short-length EEG data indicating relative independence from input parameters and small intra-class fluctuations. In addition, it showed acceptable performance for all three classification problems (interictal EEG from normal, ictal EEG from normal, and ictal EEG from interictal) compared to SampEn, which showed better results only for distinguishing normal EEG from interictal and ictal. Both SampEn and DistEn showed good reproducibility and consistency, as evidenced by the independence of results on analysing protocol.
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Affiliation(s)
- Peng Li
- School of Control Science and Engineering, Shandong University Jinan, China
| | - Chandan Karmakar
- Centre of Pattern Recognition and Data Analytics (PRaDA), Deakin University Geelong, VIC, Australia
| | - Chang Yan
- School of Control Science and Engineering, Shandong University Jinan, China
| | - Marimuthu Palaniswami
- Electrical and Electronic Engineering Department, University of Melbourne Melbourne, VIC, Australia
| | - Changchun Liu
- School of Control Science and Engineering, Shandong University Jinan, China
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Zhang Y, Ji X, Liu B, Huang D, Xie F, Zhang Y. Combined feature extraction method for classification of EEG signals. Neural Comput Appl 2016. [DOI: 10.1007/s00521-016-2230-y] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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