• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4832465)   Today's Articles (5690)
For: Romero-Santacreu L, Moreno J, Pérez-Ortín JE, Alepuz P. Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae. RNA 2009;15:1110-20. [PMID: 19369426 PMCID: PMC2685517 DOI: 10.1261/rna.1435709] [Citation(s) in RCA: 122] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2008] [Accepted: 02/27/2009] [Indexed: 05/23/2023]
Number Cited by Other Article(s)
101
de Nadal E, Ammerer G, Posas F. Controlling gene expression in response to stress. Nat Rev Genet 2011;12:833-45. [PMID: 22048664 DOI: 10.1038/nrg3055] [Citation(s) in RCA: 485] [Impact Index Per Article: 34.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
102
Shalem O, Groisman B, Choder M, Dahan O, Pilpel Y. Transcriptome kinetics is governed by a genome-wide coupling of mRNA production and degradation: a role for RNA Pol II. PLoS Genet 2011;7:e1002273. [PMID: 21931566 PMCID: PMC3169527 DOI: 10.1371/journal.pgen.1002273] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2011] [Accepted: 07/19/2011] [Indexed: 01/13/2023]  Open
103
Bergkessel M, Whitworth GB, Guthrie C. Diverse environmental stresses elicit distinct responses at the level of pre-mRNA processing in yeast. RNA (NEW YORK, N.Y.) 2011;17:1461-78. [PMID: 21697354 PMCID: PMC3153971 DOI: 10.1261/rna.2754011] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2011] [Accepted: 04/25/2011] [Indexed: 05/23/2023]
104
Pérez-Ortín JE, Jordán-Pla A, Pelechano V. A genomic view of mRNA turnover in yeast. C R Biol 2011;334:647-54. [DOI: 10.1016/j.crvi.2011.05.013] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2010] [Accepted: 03/17/2011] [Indexed: 12/01/2022]
105
Dori-Bachash M, Shema E, Tirosh I. Coupled evolution of transcription and mRNA degradation. PLoS Biol 2011;9:e1001106. [PMID: 21811398 PMCID: PMC3139634 DOI: 10.1371/journal.pbio.1001106] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2011] [Accepted: 06/03/2011] [Indexed: 11/18/2022]  Open
106
Dahan O, Gingold H, Pilpel Y. Regulatory mechanisms and networks couple the different phases of gene expression. Trends Genet 2011;27:316-22. [PMID: 21763027 DOI: 10.1016/j.tig.2011.05.008] [Citation(s) in RCA: 62] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2011] [Revised: 05/13/2011] [Accepted: 05/13/2011] [Indexed: 10/18/2022]
107
Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Mol Syst Biol 2011;7:458. [PMID: 21206491 DOI: 10.1038/msb.2010.112] [Citation(s) in RCA: 279] [Impact Index Per Article: 19.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2010] [Accepted: 11/29/2010] [Indexed: 12/12/2022]  Open
108
Castells-Roca L, García-Martínez J, Moreno J, Herrero E, Bellí G, Pérez-Ortín JE. Heat shock response in yeast involves changes in both transcription rates and mRNA stabilities. PLoS One 2011;6:e17272. [PMID: 21364882 PMCID: PMC3045430 DOI: 10.1371/journal.pone.0017272] [Citation(s) in RCA: 78] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2010] [Accepted: 01/25/2011] [Indexed: 11/18/2022]  Open
109
García-Martínez J, Pelechano V, Pérez-Ortín JE. Genomic-wide methods to evaluate transcription rates in yeast. Methods Mol Biol 2011;734:25-44. [PMID: 21468983 DOI: 10.1007/978-1-61779-086-7_2] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
110
Marín-Navarro J, Jauhiainen A, Moreno J, Alepuz P, Pérez-Ortín JE, Sunnerhagen P. Global estimation of mRNA stability in yeast. Methods Mol Biol 2011;734:3-23. [PMID: 21468982 DOI: 10.1007/978-1-61779-086-7_1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
111
Nilsson D, Sunnerhagen P. Cellular stress induces cytoplasmic RNA granules in fission yeast. RNA (NEW YORK, N.Y.) 2011;17:120-33. [PMID: 21098141 PMCID: PMC3004053 DOI: 10.1261/rna.2268111] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
112
Pelechano V, Chávez S, Pérez-Ortín JE. A complete set of nascent transcription rates for yeast genes. PLoS One 2010;5:e15442. [PMID: 21103382 PMCID: PMC2982843 DOI: 10.1371/journal.pone.0015442] [Citation(s) in RCA: 130] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2010] [Accepted: 09/21/2010] [Indexed: 11/18/2022]  Open
113
von Roretz C, Di Marco S, Mazroui R, Gallouzi IE. Turnover of AU-rich-containing mRNAs during stress: a matter of survival. WILEY INTERDISCIPLINARY REVIEWS-RNA 2010;2:336-47. [PMID: 21957021 DOI: 10.1002/wrna.55] [Citation(s) in RCA: 103] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
114
Martínez-Montañés F, Pascual-Ahuir A, Proft M. Toward a genomic view of the gene expression program regulated by osmostress in yeast. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 2010;14:619-27. [PMID: 20726780 DOI: 10.1089/omi.2010.0046] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
115
Kilchert C, Weidner J, Prescianotto-Baschong C, Spang A. Defects in the secretory pathway and high Ca2+ induce multiple P-bodies. Mol Biol Cell 2010. [PMID: 20519435 DOI: 10.1091/mbc.e10] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2023]  Open
116
Warringer J, Hult M, Regot S, Posas F, Sunnerhagen P. The HOG pathway dictates the short-term translational response after hyperosmotic shock. Mol Biol Cell 2010;21:3080-92. [PMID: 20587780 PMCID: PMC2930000 DOI: 10.1091/mbc.e10-01-0006] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
117
Kilchert C, Weidner J, Prescianotto-Baschong C, Spang A. Defects in the secretory pathway and high Ca2+ induce multiple P-bodies. Mol Biol Cell 2010;21:2624-38. [PMID: 20519435 PMCID: PMC2912349 DOI: 10.1091/mbc.e10-02-0099] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
118
Elkon R, Zlotorynski E, Zeller KI, Agami R. Major role for mRNA stability in shaping the kinetics of gene induction. BMC Genomics 2010;11:259. [PMID: 20409322 PMCID: PMC2864252 DOI: 10.1186/1471-2164-11-259] [Citation(s) in RCA: 82] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2010] [Accepted: 04/21/2010] [Indexed: 01/20/2023]  Open
119
Romero-Santacreu L, Orozco H, Garre E, Alepuz P. The bidirectional cytomegalovirus immediate/early promoter is regulated by Hog1 and the stress transcription factors Sko1 and Hot1 in yeast. Mol Genet Genomics 2010;283:511-8. [PMID: 20364387 DOI: 10.1007/s00438-010-0537-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2009] [Accepted: 03/23/2010] [Indexed: 11/26/2022]
120
Hayles B, Yellaboina S, Wang D. Comparing transcription rate and mRNA abundance as parameters for biochemical pathway and network analysis. PLoS One 2010;5:e9908. [PMID: 20361042 PMCID: PMC2845646 DOI: 10.1371/journal.pone.0009908] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2010] [Accepted: 02/19/2010] [Indexed: 01/12/2023]  Open
121
Kaposi's sarcoma-associated herpesvirus ORF57 protein binds and protects a nuclear noncoding RNA from cellular RNA decay pathways. PLoS Pathog 2010;6:e1000799. [PMID: 20221435 PMCID: PMC2832700 DOI: 10.1371/journal.ppat.1000799] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2009] [Accepted: 01/28/2010] [Indexed: 02/07/2023]  Open
122
Multilayered control of gene expression by stress-activated protein kinases. EMBO J 2009;29:4-13. [PMID: 19942851 DOI: 10.1038/emboj.2009.346] [Citation(s) in RCA: 121] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2009] [Accepted: 11/02/2009] [Indexed: 11/09/2022]  Open
123
Current awareness on yeast. Yeast 2009. [DOI: 10.1002/yea.1626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]  Open
PrevPage 3 of 3 123Next
© 2004-2025 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA