26351
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Sowmya HBV, Suresha Kumara TH, Jasinski JP, Millikan SP, Glidewell C. Crystal structure of (E)-2-fluoro-benz-aldehyde (pyridin-2-yl)hydrazone. Acta Crystallogr E Crystallogr Commun 2015; 71:o362-3. [PMID: 25995950 PMCID: PMC4420083 DOI: 10.1107/s2056989015007823] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2015] [Accepted: 04/20/2015] [Indexed: 11/22/2022]
Abstract
The title compound, C12H10FN3, is approximately planar: the dihedral angles between the mean plane of the central N-N=C spacer unit and the fluoro-benzene and pyridine rings are 14.50 (13) and 4.85 (15)°, respectively, while the dihedral angle between the aromatic rings is 16.29 (6)°. The F atom lies at the same side of the mol-ecule as the N atom of the pyridine ring. In the crystal, inversion dimers linked by pairs of N-H⋯N hydrogen bonds generate R 2 (2)(8) loops. Mol-ecules related by translation in the a direction are linked by two π-π stacking inter-actions involving pairs of benzene rings and pairs of pyridine rings. In each case, the ring-centroid separation is 3.8517 (9) Å. Two chains of this type pass through each unit cell, but there are no direction-specific inter-actions between adjacent chains.
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Affiliation(s)
- Haliwana B. V. Sowmya
- PG Department of Chemistry, Jain University, 52 Bellary Road, Hebbal, Bangalore 560 024, India
| | | | - Jerry P. Jasinski
- Department of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA
| | - Sean P. Millikan
- Department of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA
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26352
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Gayathri K, Mohan PS, Howard JAK, Sparkes HA. Crystal structure of 3-bromo-methyl-2-chloro-6-(di-bromo-meth-yl)quinoline. Acta Crystallogr E Crystallogr Commun 2015; 71:o354-5. [PMID: 25995945 PMCID: PMC4420095 DOI: 10.1107/s2056989015008002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2015] [Accepted: 04/22/2015] [Indexed: 11/18/2022]
Abstract
In the title compound, C11H7Br3ClN, the quinoline ring system is approximately planar (r.m.s. = 0.011 Å). In the crystal, mol-ecules are linked by C-H⋯Br inter-actions forming chains along [10-1]. The chains are linked by C-H⋯π and π-π inter-actions involving inversion-related pyridine rings [inter-centroid distance = 3.608 (4) Å], forming sheets parallel to (10-1). Within the sheets, there are two significant short inter-actions involving a Br⋯Cl contact of 3.4904 (18) Å and a Br⋯N contact of 3.187 (6) Å, both of which are significantly shorter than the sum of their van der Waals radii.
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Affiliation(s)
- Kasirajan Gayathri
- Department of Chemistry, Bharathiar University, Coimbatore 641 046, Tamil Nadu, India
| | - Palathurai S. Mohan
- Department of Chemistry, Bharathiar University, Coimbatore 641 046, Tamil Nadu, India
| | - Judith A. K. Howard
- Department of Chemistry, University of Durham, South Road, Durham DH1 3LE, England
| | - Hazel A. Sparkes
- Department of Chemistry, University of Durham, South Road, Durham DH1 3LE, England
- Univeristy of Bristol, Department of Chemistry, Cantock’s Close, Bristol BS8 1TS, England
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26353
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Suzuki T, Yamaguchi H, Fujiki M, Hashimoto A, Takagi HD. Crystal structures of di-chlorido-palladium(II), -platinum(II) and -rhodium(III) complexes containing 8-(di-phenyl-phosphan-yl)quinoline. Acta Crystallogr E Crystallogr Commun 2015; 71:447-51. [PMID: 25995852 PMCID: PMC4420072 DOI: 10.1107/s2056989015006076] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2015] [Accepted: 03/25/2015] [Indexed: 11/10/2022]
Abstract
The crystal structures of di-chlorido-palladium(II), -platinum(II) and -rhodium(III) complexes containing 8-(di-phenyl-phosphan-yl)quinoline, (SP-4)-[PdCl2(C21H16NP)], (1) [systematic name: di-chlor-ido-(8-di-phenyl-phosphanyl-quinoline)-palladium(II)], (SP-4)-[PtCl2(C21H16NP)]·CH2Cl2, (2) [systematic name: di-chlorido-(8-di-phenyl-phos-phanyl-quinoline)-platinum(II) dichlorometh-ane monosolvate], and (OC-6-32)-[RhCl2(C21H16NP)2]PF6·0.5CH2Cl2·0.5CH3OH, (3) [systematic name: cis-di-chlor-ido-bis-(8-di-phenyl-phosphanyl-quinoline)-rhodium(III) hexa-fluorido-phos-phate di-chloro-methane/-methanol hemisolvate] are reported. In these complexes, the phosphanyl-quinoline acts as a bidentate ligand, forming a planar asymmetrical five-membered chelate ring. The palladium(II) and platinum(II) complex mol-ecules in (1) and (2), respectively, show a typical square-planar coordination geometry and form a dimeric structure through an inter-molecular π-π stacking inter-action between the quinolyl rings. The centroid-centroid distances between the stacked six-membered rings in (1) and (2) are 3.633 (2) and 3.644 (2) Å, respectively. The cationic rhodium(III) complex in (3) has a cis(Cl),cis(P),cis(N) (OC-6-32) configuration of the ligands, in which two kinds of intra-molecular π-π stacking inter-actions are observed: between the quinolyl and phenyl rings and between two phenyl rings, the centroid-centroid distances being 3.458 (2) and 3.717 (2) Å, respectively. The PF6 (-) anion in (3) is rotationally disordered, the site occupancies of each F atom being 0.613 (14) and 0.387 (14). The CH2Cl2 and CH3OH solvent mol-ecules are also disordered and equal site occupancies of 0.5 are assumed.
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Affiliation(s)
- Takayoshi Suzuki
- Department of Chemistry, Okayama University, Okayama 700-8530, Japan
| | - Hiroshi Yamaguchi
- Graduate School of Science and Research Center for Material Science, Nagoya, University, Chikusa, Nagoya 464-8602, Japan
| | - Masayuki Fujiki
- Graduate School of Science and Research Center for Material Science, Nagoya, University, Chikusa, Nagoya 464-8602, Japan
| | - Akira Hashimoto
- Graduate School of Science and Research Center for Material Science, Nagoya, University, Chikusa, Nagoya 464-8602, Japan
| | - Hideo D. Takagi
- Graduate School of Science and Research Center for Material Science, Nagoya, University, Chikusa, Nagoya 464-8602, Japan
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26354
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Gomes LR, Low JN, Cagide F, Chavarria D, Borges F. New insights in the discovery of novel h-MAO-B inhibitors: structural characterization of a series of N-phenyl-4-oxo-4H-chromene-3-carboxamide derivatives. Acta Crystallogr E Crystallogr Commun 2015; 71:547-54. [PMID: 25995877 PMCID: PMC4420052 DOI: 10.1107/s2056989015007859] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2015] [Accepted: 04/21/2015] [Indexed: 12/03/2022]
Abstract
Six N-substituted-phenyl 4-oxo-4H-chromene-3-carboxamides, namely N-(2-nitro-phen-yl)-4-oxo-4H-chromene-3-carboxamide, C16H10N2O5 (2b), N-(3-meth-oxy-phen-yl)-4-oxo-4H-chromene-3-carboxamide, C17H13NO4, (3a), N-(3-bromo-phen-yl)-4-oxo-4H-chromene-3-carboxamide, C16H10BrNO3, (3b), N-(4-methoxy-phen-yl)-4-oxo-4H-chromene-3-carboxamide, C17H13NO4, (4a), N-(4-methyl-phen-yl)-4-oxo-4H-chromene-3-carboxamide, C17H13NO3, (4d), and N-(4-hy-droxy-phen-yl)-4-oxo-4H-chromene-3-carboxamide, C16H11NO4, (4e), have been structurally characterized. All compounds exhibit an anti conformation with respect to the C-N rotamer of the amide and a trans-related conformation with the carbonyl groups of the chromone ring of the amide. These structures present an intra-molecular hydrogen-bonded network comprising an N-H⋯O hydrogen bond between the amide N atom and the O atom of the carbonyl group of the pyrone ring, forming an S(6) ring, and a weak Car-H⋯O hydrogen bond in which the carbonyl group of the amide acts as acceptor for the H atom of an ortho-C atom of the exocyclic phenyl ring, which results in another S(6) ring. The N-H⋯O intra-molecular hydrogen bond constrains the carboxamide moiety such that it is virtually coplanar with the chromone ring.
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Affiliation(s)
- Ligia R. Gomes
- FP-ENAS-Faculdade de Ciências de Saúde, Escola Superior de Saúde da UFP, Universidade Fernando Pessoa, Rua Carlos da Maia, 296, P-4200-150 Porto, Portugal
| | - John Nicolson Low
- Department of Chemistry, University of Aberdeen, Meston Walk, Old Aberdeen AB24 3UE, Scotland
| | - Fernando Cagide
- CIQ/Departamento de Quιmica e Bioquιmica, Faculdade de Ciências, Universidade do Porto, 4169-007 Porto, Portugal
| | - Daniel Chavarria
- CIQ/Departamento de Quιmica e Bioquιmica, Faculdade de Ciências, Universidade do Porto, 4169-007 Porto, Portugal
| | - Fernanda Borges
- CIQ/Departamento de Quιmica e Bioquιmica, Faculdade de Ciências, Universidade do Porto, 4169-007 Porto, Portugal
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26355
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Mague JT, Mohamed SK, Akkurt M, Abdelhamid AA, Albayati MR. Crystal structure of 2-(5-bromo-2-hy-droxy-benzyl-idene)-2,3-di-hydro-1H-indene-1,3-dione. Acta Crystallogr E Crystallogr Commun 2015; 71:o324-5. [PMID: 25995929 PMCID: PMC4420123 DOI: 10.1107/s2056989015007434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2015] [Accepted: 04/15/2015] [Indexed: 12/04/2022]
Abstract
The title mol-ecule, C16H9BrO3, deviates slightly from planarity. The benzene ring makes a dihedral angle of 1.02 (9)° with the plane defined by the five-membered ring of the indandione moiety. The latter exhibits a minute twist indicated by the dihedral angle of 0.47 (9)° between the planes of the five- and six-membered rings. An intra-molecular C-H⋯O hydrogen bond between the attached benzene ring with one of the indandione carbonyl O atoms stabilizes the mol-ecular conformation. In the crystal, the mol-ecules form dimers across centres of inversion via pairwise O-H⋯O hydrogen bonds. The dimers form stacks running parallel to [010] and inter-act through π-π inter-actions between the five-membered ring of one mol-ecule and the six-membered rings of the indandione moiety of an adjacent mol-ecule [centroid-to-centroid distance = 3.5454 (10) Å].
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Affiliation(s)
- Joel T. Mague
- Department of Chemistry, Tulane University, New Orleans, LA 70118, USA
| | - Shaaban K. Mohamed
- Chemistry and Environmental Division, Manchester Metropolitan University, Manchester M1 5GD, England
- Chemistry Department, Faculty of Science, Minia University, 61519 El-Minia, Egypt
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Antar A. Abdelhamid
- Department of Chemistry, Faculty of Science, Sohag University, 82524 Sohag, Egypt
| | - Mustafa R. Albayati
- Kirkuk University, College of Science, Department of Chemistry, Kirkuk, Iraq
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26356
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Diop MB, Diop L, Plasseraud L, Maris T. Crystal structure of 2-methyl-1H-imidazol-3-ium aqua-tri-chlorido-(oxalato-κ(2) O,O')stannate(IV). Acta Crystallogr E Crystallogr Commun 2015; 71:520-2. [PMID: 25995870 PMCID: PMC4420124 DOI: 10.1107/s2056989015005988] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2015] [Accepted: 03/24/2015] [Indexed: 11/10/2022]
Abstract
The tin(IV) atom in the complex anion of the title salt, (C4H7N2)[Sn(C2O4)Cl3(H2O)], is in a distorted octa-hedral coordination environment defined by three chlorido ligands, an oxygen atom from a water mol-ecule and two oxygen atoms from a chelating oxalate anion. The organic cation is linked through a bifurcated N-H⋯O hydrogen bond to the free oxygen atoms of the oxalate ligand of the complex [Sn(H2O)Cl3(C2O4)](-) anion. Neighbouring stannate(IV) anions are linked through O-H⋯O hydrogen bonds involving the water mol-ecule and the two non-coordinating oxalate oxygen atoms. In combination with additional N-H⋯Cl hydrogen bonds between cations and anions, a three-dimensional network is spanned.
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Affiliation(s)
- Mouhamadou Birame Diop
- Laboratoire de Chimie Minérale et Analytique, Département de Chimie, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar, Senegal
| | - Libasse Diop
- Laboratoire de Chimie Minérale et Analytique, Département de Chimie, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar, Senegal
| | - Laurent Plasseraud
- ICMUB UMR 6302, Université de Bourgogne, Faculté des Sciences, 9 avenue Alain Savary, 21000 Dijon, France
| | - Thierry Maris
- Département de Chimie, Université de Montréal, 2900 Boulevard Édouard-Montpetit, Montréal, Québec, H3C 3J7, Canada
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26357
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Chandrika N, Suresha Kumara TH, Jasinski JP, Millikan SP, Yathirajan HS, Glidewell C. Crystal structure of 2-chloro-3-(di-meth-oxy-meth-yl)-6-meth-oxy-quinoline. Acta Crystallogr E Crystallogr Commun 2015; 71:o364-5. [PMID: 25995951 PMCID: PMC4420130 DOI: 10.1107/s205698901500804x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2015] [Accepted: 04/22/2015] [Indexed: 11/22/2022]
Abstract
The title compound, C13H14ClNO3, crystallizes with Z' = 2 in the space group Pca21, but a search for possible additional crystallographic symmetry found none. However, the crystal structure exhibits pseudosymmetry as the two independent mol-ecules are related by an approximate but non-crystallographic inversion located close to (0.38, 0.26, 1/2) in the selected asymmetric unit, and the structure exhibits partial inversion twinning. The approximate inversion relationship between the two mol-ecules in the selected asymmetric unit is clearly shown by comparison of the relevant torsion angle in the two mol-ecules; the corresponding torsion angles have similar, although not identical magnitudes but with opposite signs. The mean planes of the quinoline rings in the two independent mol-ecules are almost parallel, with a dihedral angle of only 0.16 (3)° between them, and the mutual orientation of these rings permits significant π-π stacking inter-actions between them [centroid-centroid distances = 3.7579 (15) and 3.7923 (15) Å]. In addition, the bimolecular aggregates which are related by translation along [010] are linked by a further π-π stacking inter-action [centroid-centroid distance = 3.7898 (15) Å], so forming a π-stacked chain running parallel to [010]. However, there are no C-H⋯N hydrogen bonds in the structure nor, despite the number of independent aromatic rings, are there any C-H⋯π hydrogen bonds; hence there are no direction-specific inter-actions between adjacent π-stacked chains.
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Affiliation(s)
- Nanjappa Chandrika
- PG Department of Chemistry, Jain University, 52 Bellary Road, Hebbal, Bangalore 560 024, India
| | | | - Jerry P. Jasinski
- Department of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA
| | - Sean P. Millikan
- Department of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA
| | - Hemmige S. Yathirajan
- Department of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India
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26358
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Mohamed SK, Mague JT, Akkurt M, Abdu-Allah HHM, Albayati MR. Crystal structure of methyl 2-hy-droxy-5-[(4-oxo-4,5-di-hydro-1,3-thia-zol-2-yl)amino]benzoate. Acta Crystallogr E Crystallogr Commun 2015; 71:o282-3. [PMID: 25995905 PMCID: PMC4420109 DOI: 10.1107/s2056989015006416] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2015] [Accepted: 03/30/2015] [Indexed: 11/18/2022]
Abstract
The title compound, C11H10N2O4S, crystallized with two independent mol-ecules (A and B) in the asymmetric unit. They differ primarily in the rotational orientation of the five-membered heterocyclic ring. In mol-ecule A this ring is inclined to the benzene ring by 48.17 (8)°, while in mol-ecule B the same dihedral angle is 23.07 (8)°. In each mol-ecule there is an intra-molecular O-H⋯O hydrogen bond involving the adjacent hydroxyl group and the ester carbonyl O atom. In the crystal, the A mol-ecules are linked via pairs of N-H⋯N hydrogen bonds, forming inversion dimers. These dimers are linked to the B mol-ecules via N-H.·O, C-H⋯O and C-H⋯S hydrogen bonds forming corrugated sheets lying parallel to (102).
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Affiliation(s)
- Shaaban K. Mohamed
- Chemistry and Environmental Division, Manchester Metropolitan University, Manchester M1 5GD, England
- Chemistry Department, Faculty of Science, Minia University, 61519 El-Minia, Egypt
| | - Joel T. Mague
- Department of Chemistry, Tulane University, New Orleans, LA 70118, USA
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Hajjaj H. M. Abdu-Allah
- Department of Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Assiut University, 71515 Assiut, Egypt
| | - Mustafa R. Albayati
- Kirkuk University, College of Science, Department of Chemistry, Kirkuk, Iraq
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26359
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Devarajegowda HC, Suchetan PA, Srinivasa HT, Sreenivasa S, Palakshamurthy BS. Crystal structure of 4-bromo-phenyl-2-oxo-2H-chromene-3-carboxyl-ate. Acta Crystallogr E Crystallogr Commun 2015; 71:o326-7. [PMID: 25995930 PMCID: PMC4420041 DOI: 10.1107/s2056989015006738] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Accepted: 04/03/2015] [Indexed: 11/21/2022]
Abstract
In the title compound, C16H9BrO4, the coumarin ring system is approximately planar, with an r.m.s deviation of the ten fitted non-H atoms of 0.031 Å, and forms a dihedral angle of 25.85 (10)° with the bromo-benzene ring. The carbonyl atoms are syn. In the crystal, mol-ecules are connected along [001] via C-H⋯O inter-actions, forming C(6) chains. Neighbouring C(6) chains are connected via several π-π inter-actions [range of centroid-centroid distances = 3.7254 (15)-3.7716 (16) Å], leading to sheets propagating in the bc plane.
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Affiliation(s)
- H. C. Devarajegowda
- Department of Physics, Yuvaraja’s College (Constituent College), University of Mysore, Mysore, Karnataka 570 005, India
| | - P. A. Suchetan
- Department of Studies and Research in Chemistry, U.C.S., Tumkur University, Tumkur, Karnataka 572 103, India
| | - H. T. Srinivasa
- Raman Research Institute, C. V. Raman Avenue, Sadashivanagar, Bangalore, Karnataka 560080, India
| | - S. Sreenivasa
- Department of Studies and Research in Chemistry, Tumkur University, Tumkur, Karnataka 572 103, India
| | - B. S. Palakshamurthy
- Department of Physics, Yuvaraja’s College (Constituent College), University of Mysore, Mysore, Karnataka 570 005, India
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26360
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Noland WE, Worth MA, Schneerer AK, Paal CL, Tritch KJ. Crystal structure of rac-(3a'R,9a'R)-3a'-(indol-3-yl)-1',2',3',3a',4',9a'-hexa-hydro-spiro-[cyclo-pentane-1,9'-penta-leno[1,2-b]indole] p-xylene hemisolvate. Acta Crystallogr E Crystallogr Commun 2015; 71:516-9. [PMID: 25995869 PMCID: PMC4420065 DOI: 10.1107/s2056989015007422] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2015] [Accepted: 04/15/2015] [Indexed: 11/11/2022]
Abstract
The title compound, C26H26N2·0.5C8H10, is the first reported characterized 2:2 product from acid-catalyzed condensation of indole with cyclo-penta-none and no other 2:2 products were observed. Recrystallization from p-xylene gave the title hemisolvate with the p-xylene mol-ecule located about an inversion center. The terminal penta-lene ring is envelope-flap disordered at the C atom farthest from the skeletal indole unit, with a refined occupancy ratio of 0.819 (4):0.181 (4). The major component has this C atom bent away from the spiro-fused cyclo-pentane ring. In the crystal, mol-ecules are connected by N-H⋯π inter-actions, forming chains along [100], and N-H⋯π and C-H⋯π inter-actions, forming chains along [001], which results in the formation of slabs parallel to (010).
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Affiliation(s)
- Wayland E Noland
- Department of Chemistry, University of Minnesota, Minneapolis, MN 55455-0431, USA
| | - Matthew A Worth
- Department of Chemistry, University of Minnesota, Minneapolis, MN 55455-0431, USA
| | - Andrew K Schneerer
- Department of Chemistry, University of Minnesota, Minneapolis, MN 55455-0431, USA
| | - Courtney L Paal
- Department of Chemistry, University of Minnesota, Minneapolis, MN 55455-0431, USA
| | - Kenneth J Tritch
- Department of Chemistry, University of Minnesota, Minneapolis, MN 55455-0431, USA
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26361
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Viger-Gravel J, Korobkov I, Bryce DL. Crystal structure of tetra-ethyl-ammonium chloride 3,4,5,6-tetra-fluoro-1,2-di-iodo-benzene. Acta Crystallogr E Crystallogr Commun 2015; 71:o319-20. [PMID: 25995926 PMCID: PMC4420113 DOI: 10.1107/s205698901500732x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2015] [Accepted: 04/13/2015] [Indexed: 11/13/2022]
Abstract
Equimolar qu-anti-ties of tetra-ethyl-ammonium chloride (Et4NCl) and 3,4,5,6-tetra-fluoro-1,2-di-iodo-benzene (o-DITFB or o-C6F4I2) have been co-crystallized in a solution of di-chloro-methane yielding a pure halogen-bonded compound, 3,4,5,6-tetra-fluoro-1,2-di-iodo-benzene-tetra-ethyl ammonium chloride (2/1), Et4N(+)·Cl(-)·2C6F4I2, in the form of translucent needles. [(Et4NCl)(o-C6F4I2)2] packs in the C2/c space group. The asymmetric unit includes one mol-ecule of DITFB, one Et4N(+) cation located on a twofold rotation axis, and one chloride anion also located on a twofold rotation symmetry axis. This compound has an inter-esting halogen-bonding environment surrounding the halide. Here, the chloride anion acts as a tetra-dentate halogen bond acceptor and forms a distorted square-pyramidal geometry, with I⋯Cl(-)⋯I angles of 80.891 (6) and 78.811 (11)°, where two crystallographically distinct iodine atoms form halogen bonds with the chloride anion. Resulting from that square-pyramidal geometry are short contacts between some of the adjacent F atoms. Along the b axis, the halogen-bonding inter-action results in a polymeric network, producing a sheet in which the two closest chloride ions are 7.8931 (6) Å apart. The Et4N(+) cation alternates in columns with the halide ion. The expected short contacts (shorter than the sum of their van der Waals radii) are observed for the halogen bonds [3.2191 (2) and 3.2968 (2) Å], as well as almost linear angles [170.953 (6) and 173.529 (6)°].
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Affiliation(s)
- Jasmine Viger-Gravel
- Department of Chemistry, University of Ottawa, D’Iorio Hall, 10 Marie Curie Private, Ottawa, Ontario, K1N 6N5, Canada
| | - Ilia Korobkov
- Department of Chemistry, University of Ottawa, D’Iorio Hall, 10 Marie Curie Private, Ottawa, Ontario, K1N 6N5, Canada
| | - David L. Bryce
- Department of Chemistry, University of Ottawa, D’Iorio Hall, 10 Marie Curie Private, Ottawa, Ontario, K1N 6N5, Canada
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26362
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Chivers T, Ritch JS. A square-planar tellurium(II) complex withTe,Te′-chelating ligands. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:407-9. [DOI: 10.1107/s2053229615007949] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2015] [Accepted: 04/21/2015] [Indexed: 11/11/2022]
Abstract
While exploring the chemistry of tellurium-containing dichalcogenidoimidodiphosphinate ligands, the first all-tellurium member of a series of related square-planarEII(E′)4complexes (EandE′ are group 16 elements), namely bis(P,P,P′,P′-tetraphenylditelluridoimidodiphosphinato-κ2Te,Te′)tellurium(II) (systematic name: 2,2,4,4,8,8,10,10-octaphenyl-1λ3,5,6λ4,7λ3,11-pentatellura-3,9-diaza-2λ5,4λ5,8λ5,10λ5-tetraphosphaspiro[5.5]undeca-1,3,7,9-tetraene), C48H40N2P4Te5, was obtained unexpectedly. The formally TeIIcentre is situated on a crystallographic inversion centre and isTe,Te′-chelated to two anionic [(TePPh2)2N]−ligands in ananticonformation. The central TeII(Te)4unit is approximately square planar [Te—Te—Te = 93.51 (3) and 86.49 (3)°], with Te—Te bond lengths of 2.9806 (6) and 2.9978 (9) Å.
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26363
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Muddala NP, Nammalwar B, Selvaraju S, Bourne CR, Henry M, Bunce RA, Berlin KD, Barrow EW, Barrow WW. Evaluation of New Dihydrophthalazine-Appended 2,4-Diaminopyrimidines against Bacillus anthracis: Improved Syntheses Using a New Pincer Complex. Molecules 2015; 20:7222-44. [PMID: 25905602 PMCID: PMC4445145 DOI: 10.3390/molecules20047222] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2015] [Revised: 04/14/2015] [Accepted: 04/15/2015] [Indexed: 02/05/2023] Open
Abstract
The synthesis and evaluation of ten new dihydrophthalazine-appended 2,4-diaminopyrimidines as potential drugs to treat Bacillus anthracis is reported. An improved synthesis utilizing a new pincer catalyst, dichlorobis[1-(dicyclohexylphosphanyl)-piperidine]palladium(II), allows the final Heck coupling to be performed at 90 °C using triethylamine as the base. These milder conditions have been used to achieve improved yields for new and previously reported substrates with functional groups that degrade or react at the normal 140 °C reaction temperature. An analytical protocol for separating the S and R enantiomers of two of the most active compounds is also disclosed. Finally, the X-ray structure for the most active enantiomer of the lead compound, (S)-RAB1, is given.
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Affiliation(s)
- Nagendra Prasad Muddala
- Department of Chemistry, Oklahoma State University, 107 Physical Sciences, Stillwater, OK 74078, USA.
| | - Baskar Nammalwar
- Department of Chemistry, Oklahoma State University, 107 Physical Sciences, Stillwater, OK 74078, USA.
| | - Subhashini Selvaraju
- Department of Chemistry, Oklahoma State University, 107 Physical Sciences, Stillwater, OK 74078, USA.
| | - Christina R Bourne
- Department of Chemistry and Biochemistry, University of Oklahoma, 101 Stephenson Parkway, Norman, OK 73019, USA.
| | - Mary Henry
- Department of Veterinary Pathobiology, Oklahoma State University, 250 McElroy Hall, Stillwater, OK 74078, USA.
| | - Richard A Bunce
- Department of Chemistry, Oklahoma State University, 107 Physical Sciences, Stillwater, OK 74078, USA.
| | - K Darrell Berlin
- Department of Chemistry, Oklahoma State University, 107 Physical Sciences, Stillwater, OK 74078, USA.
| | - Esther W Barrow
- Department of Veterinary Pathobiology, Oklahoma State University, 250 McElroy Hall, Stillwater, OK 74078, USA.
| | - William W Barrow
- Department of Veterinary Pathobiology, Oklahoma State University, 250 McElroy Hall, Stillwater, OK 74078, USA.
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26364
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Mlostoń G, Urbaniak K, Linden A, Heimgartner H. Selenophen-2-yl-Substituted Thiocarbonyl Ylides - at the Borderline of Dipolar and Biradical Reactivity. Helv Chim Acta 2015. [DOI: 10.1002/hlca.201500050] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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26365
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Mlostoń G, Pipiak P, Linden A, Heimgartner H. Studies on the Reactions of ThiocarbonylS-Methanides with Hetaryl Thioketones. Helv Chim Acta 2015. [DOI: 10.1002/hlca.201500057] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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26366
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Sovago I, Bond AD. Expanding the structural landscape of niclosamide: a highZ′ polymorph, two new solvates and monohydrate HA. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:394-401. [DOI: 10.1107/s2053229615005847] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2015] [Accepted: 03/23/2015] [Indexed: 11/10/2022]
Abstract
Three new crystalline phases are reported for the drug niclosamide [5-chloro-N-(2-chloro-4-nitrophenyl)-2-hydroxybenzamide], C13H8Cl2N2O4. A new high-Z′ polymorph (denoted Form II) is described, with four molecules in the asymmetric unit in the space groupP2/n. The structure exhibits pseudosymmetry, including local translations and screw-type operations. The niclosamide molecules are linked by O—H...O hydrogen bonds into chains, and the chains are packed so that the molecules form face-to-face (stacking) and end-to-end interactions within layers perpendicular to the chains. There are two different layer arrangements, giving a structure that is relatively complex. In the acetone and acetonitrile solvates, the incorporated solvent molecules accept hydrogen bonds from the OH groups of niclosamide, and the niclosamide molecules are stacked in a face-to-face manner. In the acetone solvate, C13H8Cl2N2O4·C3H6O, V-shaped arrangements are formed in which the nitrobenzene ends of the niclosamide molecules are brought into face-to-face contact. In the acetonitrile solvate, C13H8Cl2N2O4·CH3CN, stacking occurs by translation along a short axis (ca3.8 Å) and the crystals are frequently observed to be twinned by twofold rotation around that axis. The acetonitrile molecules occupy channels in the structure. A complete structure is provided for niclosamide monohydrate, C13H8Cl2N2O4·H2O, polymorph HA, obtained by Rietveld refinement against laboratory powder X-ray diffraction data. It has been suggested that this compound is related to the methanol solvate of niclosamide [Harriss, Wilson & Radosevljevic Evans (2014).Acta Cryst.C70, 758–763], but it is found that the two are not fully isostructural: they contain isostructural two-dimensional layers, but the layers are arranged differently in the two structures. This suggests that HAmay have the potential for polytypism, and features in the Rietveld difference curve indicate that a polytype fully isostructural with the methanol solvate might be present.
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26367
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Ghiassi KB, Walters DT, Aristov MM, Loewen ND, Berben LA, Rivera M, Olmstead MM, Balch AL. Formation of a Stable Complex, RuCl2(S2CPPh3)(PPh3)2, Containing an Unstable Zwitterion from the Reaction of RuCl2(PPh3)3 with Carbon Disulfide. Inorg Chem 2015; 54:4565-73. [DOI: 10.1021/acs.inorgchem.5b00461] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Kamran B. Ghiassi
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
| | - Daniel T. Walters
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
| | - Michael M. Aristov
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
| | - Natalia D. Loewen
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
| | - Louise A. Berben
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
| | - Melissa Rivera
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
| | - Marilyn M. Olmstead
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
| | - Alan L. Balch
- Department of Chemistry, University of California, 1 Shields Avenue, Davis, California 95616, United States
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26368
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Herrmann H, Reinmuth M, Wiesner S, Hübner O, Kaifer E, Wadepohl H, Himmel HJ. Urea Azines (Bisguanidines): Electronic Structure, Redox Properties, and Coordination Chemistry. Eur J Inorg Chem 2015. [DOI: 10.1002/ejic.201500228] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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26369
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Farkašová N, Černák J, Falvello LR, Orendáč M, Boča R. Synthesis, crystal structure and magnetic properties of (acetato-κ²O,O')bis(5,5'-dimethyl-2,2'-bipyridine-κ²N,N')nickel(II) perchlorate monohydrate. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:252-7. [PMID: 25836280 DOI: 10.1107/s2053229615003952] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2015] [Accepted: 02/25/2015] [Indexed: 11/11/2022]
Abstract
The title hydrated ionic complex, [Ni(CH3COO)(C12H12N2)2]ClO4·H2O or [Ni(ac)(5,5'-dmbpy)2]ClO4·H2O (where 5,5'-dmbpy is 5,5'-dimethyl-2,2'-bipyridine and ac is acetate), (1), was isolated as violet crystals from the aqueous ethanolic nickel acetate-5,5'-dmbpy-KClO4 system. Within the complex cation, the Ni(II) atom is hexacoordinated by two chelating 5,5'-dmbpy ligands and one chelating ac ligand. The mean Ni-N and Ni-O bond lengths are 2.0628 (17) and 2.1341 (15) Å, respectively. The water solvent molecule is disordered over two partially occupied positions and links two complex cations and two perchlorate anions into hydrogen-bonded centrosymmetric dimers, which are further connected by π-π interactions. The magnetic properties of (1) at low temperatures are governed by the action of single-ion anisotropy, D, which arises from the reduced local symmetry of the cis-NiO2N4 chromophore. The fitting of the variable-temperature magnetic data (2-300 K) gives g(iso) = 2.134 and D/hc = 3.13 cm(-1).
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Affiliation(s)
- Nela Farkašová
- P. J. Šafárik University in Košice, Faculty of Sciences, Institute of Chemistry, Department of Inorganic Chemistry, Moyzesova 11, 041 54 Košice, Slovakia
| | - Juraj Černák
- P. J. Šafárik University in Košice, Faculty of Sciences, Institute of Chemistry, Department of Inorganic Chemistry, Moyzesova 11, 041 54 Košice, Slovakia
| | - Larry R Falvello
- Instituto de Ciencia de Materiales de Aragón (ICMA), Departamento de Química Inorgánica, CSIC-University of Zaragoza, Pedro Cerbuna 12, E-50009 Zaragoza, Spain
| | - Martin Orendáč
- Centre for Low Temperature Physics of the Faculty of Science of the P. J. Šafárik University and Institute of Experimental Physics of the Slovak Academy of Science, Park Angelinum 9, 041 54 Košice, Slovakia
| | - Roman Boča
- University of SS Cyril and Methodius, FPV, Department of Chemistry, 917 01 Trnava, Slovakia
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26370
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Shi W, Liu JJ, Ou XP, Huang CC. A three-dimensional cadmium(II) coordination polymer with unequal homochiral double-stranded concentric helical chains. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:289-93. [PMID: 25836287 DOI: 10.1107/s2053229615004258] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2014] [Accepted: 03/02/2015] [Indexed: 11/10/2022]
Abstract
A homochiral helical three-dimensional coordination polymer, poly[[(μ2-acetato-κ(3)O,O':O)(hydroxido-κO)(μ4-5-nicotinamido-1H-1,2,3,4-tetrazol-1-ido-κ(5)N(1),O:N(2):N(4):N(5))(μ3-5-nicotinamido-1H-1,2,3,4-tetrazol-1-ido-κ(4)N(1),O:N(2):N(4):N(5))dicadmium(II)] 0.75-hydrate], {[Cd2(C7H5N6O)2(CH3COO)(OH)]·0.75H2O}n, was synthesized by the reaction of cadmium acetate, N-(1H-tetrazol-5-yl)isonicotinamide (H-NTIA), ethanol and H2O under hydrothermal conditions. The asymmetric unit contains two crystallographically independent Cd(II) cations, two deprotonated 5-nicotinamido-1H-1,2,3,4-tetrazol-1-ide (NTIA(-)) ligands, one acetate anion, one hydroxide anion and three independent partially occupied water sites. The two Cd(II) cations, with six-coordinated octahedral and seven-coordinated pentagonal bipyramidal geometries are located on general sites. The tetrazole group of one symmetry-independent NTIA(-) ligand links one of the independent Cd(II) cations into 61 helical chains, while the other NTIA(-) ligand links the other independent Cd(II) cations into similar but unequal 61 helical chains. These chains, with a pitch of 24.937 (5) Å, intertwine into a double-stranded helix. Each of the double-stranded 61 helices is further connected to six adjacent helical chains through an acetate μ2-O atom and the tetrazole group of the NTIA(-) ligand into a three-dimensional framework. The helical channel is occupied by the isonicotinamide groups of NTIA(-) ligands and two helices are connected to each other through the pyridine N and carbonyl O atoms of isonicotinamide groups. In addition, N-H···O and O-H···N hydrogen bonds exist in the complex.
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Affiliation(s)
- Wei Shi
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350108, People's Republic of China
| | - Jian-Jun Liu
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350108, People's Republic of China
| | - Xiang-Ping Ou
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350108, People's Republic of China
| | - Chang-Cang Huang
- College of Chemistry, Fuzhou University, Fuzhou, Fujian 350108, People's Republic of China
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26371
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Lamberts K, Şerb MD, Englert U. Unexpected proline coordination in the copper chain polymer [Cu(μ-Cl)₂(μ-DL-proline-κ²O:O')]¹∞. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:271-5. [PMID: 25836284 DOI: 10.1107/s205322961500426x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Accepted: 03/02/2015] [Indexed: 11/10/2022]
Abstract
In catena-poly[copper(II)-di-μ-chlorido-μ-proline-κ(2)O:O'], [CuCl2(C5H9NO2)]n, two symmetry-independent metal cations adopt distorted octahedral coordination, typical for d(9) Jahn-Teller systems. Each chloride bridge is involved in both a short and a very long interaction with a Cu(II) centre. The centrosymmetric crystal structure contains homochiral chains of opposite handedness which extend along the shortest lattice parameter (i.e. a). The O:O'-bridging coordination mode of proline, although a common motif for such complexes in general, is remarkable for Cu(II); the vast majority of amino acid derivatives of this cation are characterized by N,O-chelation.
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Affiliation(s)
- Kevin Lamberts
- Institut für Anorganische Chemie, RWTH Aachen, Landoltweg 1, 52074 Aachen, Germany
| | - Mihaela-Diana Şerb
- Faculty of Applied Chemistry and Materials Science, University Politehnica of Bucharest, Polizu 1, RO-011061 Bucharest, Romania
| | - Ulli Englert
- Institut für Anorganische Chemie, RWTH Aachen, Landoltweg 1, 52074 Aachen, Germany
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26372
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Atria AM, Garland MT, Baggio R. Three isotypic polymeric complexes with rare earth cations, but-2-enoate anions and 4,4'-(ethane-1,2-diyl)dipyridine and 4,4'-(ethene-1,2-diyl)dipyridine bridging ligands. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:301-5. [PMID: 25836290 DOI: 10.1107/s2053229615004751] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2015] [Accepted: 03/08/2015] [Indexed: 11/10/2022]
Abstract
Three isotypic rare earth complexes, catena-poly[[aquabis(but-2-enoato-κ(2)O,O')yttrium(III)]-bis(μ-but-2-enoato)-κ(3)O,O':O;κ(3)O:O,O'-[aquabis(but-2-enoato-κ(2)O,O')yttrium(III)]-μ-4,4'-(ethane-1,2-diyl)dipyridine-κ(2)N:N'], [Y2(C4H5O2)6(C12H12N2)(H2O)2], the gadolinium(III) analogue, [Gd2(C4H5O2)6(C12H12N2)(H2O)2], and the gadolinium(III) analogue with a 4,4'-(ethene-1,2-diyl)dipyridine bridging ligand, [Gd2(C4H5O2)6(C12H10N2)(H2O)2], are one-dimensional coordination polymers made up of centrosymmetric dinuclear [M(but-2-enoato)3(H2O)]2 units (M = rare earth), further bridged by centrosymmetric 4,4'-(ethane-1,2-diyl)dipyridine or 4,4'-(ethene-1,2-diyl)dipyridine spacers into sets of chains parallel to the [201̄] direction. There are intra-chain and inter-chain hydrogen bonds in the structures, the former providing cohesion of the linear arrays and the latter promoting the formation of broad planes parallel to (010).
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Affiliation(s)
- Ana María Atria
- Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Casilla 233, Santiago, Chile
| | - Maria Teresa Garland
- Departamento de Física, Facultad de Ciencias Físicas y Matemáticas, Universidad de Chile, Santiago de Chile, Chile
| | - Ricardo Baggio
- Departamento de Física, Centro Atómico Constituyentes, Comisión Nacional de Energía Atómica, Buenos Aires, Argentina
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26373
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Rivera A, Uribe JM, Ríos-Motta J, Osorio HJ, Bolte M. Evidence for stereoelectronic effects in the N-C-N group of 8,10,12-triaza-1-azoniatetracyclo[8.3.1.1(8,12).0(2,7)]pentadecane 4-nitrophenolate 4-nitrophenol monosolvate from the protonation of aminal (2R,7R)-1,8,10,12-tetraazatetracyclo[8.3.1.1(8,12).0(2,7)]pentadecane: X-ray and natural bond orbital analysis. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:284-8. [PMID: 25836286 DOI: 10.1107/s2053229615004829] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2015] [Accepted: 03/09/2015] [Indexed: 11/11/2022]
Abstract
The title molecular salt, C11H21N4(+)·C6H4NO3(-)·C6H5NO3, (II), crystallizes with two independent three-component aggregates in the asymmetric unit. In the cations, the cyclohexane rings fused to the cage azaadamantane systems both adopt a chair conformation. In the crystal structure, the aggregates are connected by C-H···O hydrogen bonds, forming a supramolecular unit enclosing an R4(4)(24) ring motif. These units are linked via C-H···O and C-H···N hydrogen bonds, forming a three-dimensional network. Even hydrogen-bond formation to one of the N atoms is enough to induce structural stereoelectronic effects in the normal donor→acceptor direction. The C-N bond distances provide structural evidence for a strong anomeric effect. The structure also displays O-H···O and N-H···O hydrogen bonding. Geometric optimization and natural bond orbital (NBO) analysis of (II) were undertaken by utilizing DFT/B3LYP with the 6-31+G(d,p) basis set. NBO second-order perturbation theory calculations indicate donor-acceptor interactions between nitrogen lone pairs and the antibonding orbital of the C-C and C-N bonds for the protonated polyamine, in agreement with the occurrence of bond-length and bond-angle changes within the aminal cage structure.
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Affiliation(s)
- Augusto Rivera
- Departamento de Química, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá, Cra 30 No. 45-03, Bogotá 111321, Colombia
| | - Juan Manuel Uribe
- Departamento de Química, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá, Cra 30 No. 45-03, Bogotá 111321, Colombia
| | - Jaime Ríos-Motta
- Departamento de Química, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá, Cra 30 No. 45-03, Bogotá 111321, Colombia
| | | | - Michael Bolte
- Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438 Frankfurt/Main, Germany
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26374
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Huang QY, Zhang YH, Meng XR. A one-dimensional zinc(II) coordination polymer based on mixed multidentate N- and O-donor ligands. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:306-10. [PMID: 25836291 DOI: 10.1107/s2053229615005422] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2015] [Accepted: 03/16/2015] [Indexed: 11/10/2022]
Abstract
In the title coordination polymer, catena-poly[[bis[{1-[(1H-benzimidazol-2-yl-κN(3))methyl]-1H-tetrazole}zinc(II)]-bis(μ4-pentane-1,5-dioato-1:2:1':2'κ(4)O(1):O(1'):O(5):O(5'))] methanol disolvate], {[Zn(C5H6O4)(C9H8N6)]·CH3OH}n, each Zn(II) ion is five-coordinated by four O atoms from four glutarate ligands and by one N atom from a 1-[(1H-benzimidazol-2-yl)methyl]-1H-tetrazole (bimt) ligand, leading to a slightly distorted square-pyramidal coordination environment. Two Zn(II) ions are linked by four bridging glutarate carboxylate groups to generate a dinuclear [Zn2(CO2)4] paddle-wheel unit. The dinuclear units are further connected into a one-dimensional chain via the glutarate ligands. The bimt ligands coordinate to the Zn(II) ions in a monodentate mode and are pendant on both sides of the main chain. In the crystal, the chains are linked by O-H···O and N-H···O hydrogen bonds into a two-dimensional layered structure. Adjacent layers are further packed into a three-dimensional network through van der Waals forces. A thermogravimetric analysis was carried out and the photoluminescent behaviour of the polymer was investigated.
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Affiliation(s)
- Qiu-Ying Huang
- Department of Chemical Engineering, Henan Polytechnic Institute, 473009 Nanyang, Henan, People's Republic of China
| | - Yu-Hong Zhang
- The College of Chemistry and Molecular Engineering, Zhengzhou University, 450001 Zhengzhou, Henan, People's Republic of China
| | - Xiang-Ru Meng
- The College of Chemistry and Molecular Engineering, Zhengzhou University, 450001 Zhengzhou, Henan, People's Republic of China
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26375
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Lamberts K, Şerb MD, Englert U. One- and two-dimensional polymers from proline and calcium bromide. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2015; 71:311-7. [PMID: 25836292 DOI: 10.1107/s2053229615005008] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2015] [Accepted: 03/11/2015] [Indexed: 11/11/2022]
Abstract
Reactions of calcium bromide with enantiopure and racemic proline in aqueous solution lead to two solids in which the zwitterionic amino acid acts as a bridging ligand between neighbouring cations. Depending on the chirality of the amino acid, topologically very different products are obtained. With racemic proline, bromide acts as a simple uncoordinated counter-anion for the cationic heterochiral chains in catena-poly[[aquacalcium(II)]-μ-aqua-μ3-DL-proline-μ2-DL-proline], {[Ca(C5H9NO2)2(H2O)2]Br2}n. In agreement with chemical intuition, only carboxylate and aqua O atoms coordinate the alkaline earth cation in a low-symmetry arrangement. In contrast, L-proline affords the two-dimensional network poly[dibromidobis(μ2-L-proline)calcium(II)], [CaBr2(C5H9NO2)2]n, with an unexpected CaBr2 unit in a more regular coordination sphere.
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Affiliation(s)
- Kevin Lamberts
- Institut für Anorganische Chemie, RWTH Aachen, Landoltweg 1, 52074 Aachen, Germany
| | - Mihaela-Diana Şerb
- Faculty of Applied Chemistry and Materials Science, University Politehnica of Bucharest, Polizu 1, RO-011061 Bucharest, Romania
| | - Ulli Englert
- Institut für Anorganische Chemie, RWTH Aachen, Landoltweg 1, 52074 Aachen, Germany
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26376
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McLauchlan CC, Kissel DS, Herlinger AW. Crystal structure of {2,2'-[N,N'-bis-(pyridin-2-yl-meth-yl)cyclo-hexane-trans-1,2-diyldi(nitrilo)]di-acetato}-cobalt(III) hexa-fluorido-phosphate. Acta Crystallogr E Crystallogr Commun 2015; 71:380-4. [PMID: 26029396 PMCID: PMC4438832 DOI: 10.1107/s2056989015005149] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Accepted: 03/13/2015] [Indexed: 11/13/2022]
Abstract
The title compound [Co(C22H26N4O4)]PF6, commonly known as [Co(bpcd)]PF6, where bpcd(2-) is derived from the historical ligand name N,N'-bis-(2-pyridyl-meth-yl)-trans-1,2-di-amino-cyclo-hexane-N,N'-di-acetate, crystallized by slow evaporation of a saturated aceto-nitrile solution in air. The cation of the hexa-fluorido-phosphate salt has the Co(III) atom in a distorted octa-hedral coordination geometry provided by an N4O2 donor atom set. The acetate groups, which are oriented trans with respect to each other, exhibit monodentate coordination whereas the pyridyl N atoms are coordinating in a cis configuration. The geometry of the cation is compared to the geometries of other di-amino di-acetate complexes with Co(III).
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Affiliation(s)
- Craig C. McLauchlan
- Department of Chemistry, Illinois State University, Campus Box 4160, Normal, IL 61790-4160, USA
| | - Daniel S. Kissel
- Department of Chemistry and Biochemistry, Loyola University Chicago, Chicago, IL 60626, USA
| | - Albert W. Herlinger
- Department of Chemistry and Biochemistry, Loyola University Chicago, Chicago, IL 60626, USA
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26377
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Strehler F, Korb M, Lang H. Crystal structure of ruthenocenecarbo-nitrile. Acta Crystallogr E Crystallogr Commun 2015; 71:398-401. [PMID: 26029400 PMCID: PMC4438815 DOI: 10.1107/s205698901500540x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2015] [Accepted: 03/16/2015] [Indexed: 11/29/2022]
Abstract
The mol-ecular structure of ruthenocenecarbo-nitrile, [Ru(η(5)-C5H4C N)(η(5)-C5H5)], exhibits point group symmetry m, with the mirror plane bis-ecting the mol-ecule through the C N substituent. The Ru(II) atom is slightly shifted from the η(5)-C5H4 centroid towards the C N substituent. In the crystal, mol-ecules are arranged in columns parallel to [100]. One-dimensional inter-molecular π-π inter-actions [3.363 (3) Å] between the C N carbon atom and one carbon of the cyclo-penta-dienyl ring of the overlaying mol-ecule are present.
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Affiliation(s)
- Frank Strehler
- Technische Universität Chemnitz, Fakultät für Naturwissenschaften, Institut für Chemie, Anorganische Chemie, D-09107 Chemnitz, Germany
| | - Marcus Korb
- Technische Universität Chemnitz, Fakultät für Naturwissenschaften, Institut für Chemie, Anorganische Chemie, D-09107 Chemnitz, Germany
| | - Heinrich Lang
- Technische Universität Chemnitz, Fakultät für Naturwissenschaften, Institut für Chemie, Anorganische Chemie, D-09107 Chemnitz, Germany
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26378
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Son KS, Woo JO, Kim D, Kang SK. Crystal structure of di-chlorido-{2,6-bis-[(3-phenyl-1H-pyrazol-1-yl)meth-yl]pyridine}cobalt(II). Acta Crystallogr E Crystallogr Commun 2015; 71:m75-6. [PMID: 26029409 PMCID: PMC4438808 DOI: 10.1107/s2056989015003862] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2015] [Accepted: 02/24/2015] [Indexed: 11/10/2022]
Abstract
In the title complex, [CoCl2(C25H21N5)], the Co(II) atom is coordinated by two Cl atoms and two N atoms, provided by a tridentate pyrazolylpyridyl ligand, forming a slightly distorted tetra-hedral geometry [range of angles: 96.51 (10) (chelate ring) to 118.60 (9)°]. The dihedral angle between Cl/Co/Cl and N/Co/N planes is 86.83 (7)°. The chelate ring has the conformation of a distorted boat. The dihedral angle between pyridyl ring and the coordinated pyrazolyl ring is 56.16 (12)°. The uncoordinated pyrazolyl ring is almost perpendicular to the pyridyl ring with the dihedral angle of 87.49 (10)°. In the crystal packing, inter-molecular phenyl-C-H ⋯π(pyrid-yl) inter-actions generate dimeric aggregates. These are connected into a zigzag supra-molecular chain along the c-axis direction via π-π inter-actions [inter-centroid distance between pyridyl and phenyl rings = 3.664 (2) Å].
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Affiliation(s)
- Kyung-sun Son
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
| | - Jeong Oh Woo
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
| | - Daeyoung Kim
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
| | - Sung Kwon Kang
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
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26379
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Caracelli I, Zukerman-Schpector J, Moran PJS, de Paula BRS, Tiekink ERT. Crystal structure of 7-[(2E)-2-benzyl-idene-3-oxobut-oxy]-4-methyl-2H-chromen-2-one. Acta Crystallogr E Crystallogr Commun 2015; 71:o222-3. [PMID: 26029424 PMCID: PMC4438806 DOI: 10.1107/s2056989015003084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2015] [Accepted: 02/13/2015] [Indexed: 11/10/2022]
Abstract
Two independent mol-ecules (A and B) comprise the asymmetric unit of the title compound, C21H18O4. There are significant conformational differences between the mol-ecules relating in particular to the relative orientation of the 3-oxo-2-(phenyl-methyl-idene)but-oxy substituent with respect to the superimposable chromen-2-one residues. To a first approximation, the substituents are mirror images; both are approximately perpendicular to the chromen-2-one fused ring system with dihedral angles of 88.50 (7) (A) and 81.96 (7)° (B). Another difference between the independent mol-ecules is noted in the dihedral angles between the adjacent phenyl and but-3-en-2-one groups of 8.72 (12) (A) and 27.70 (10)° (B). The conformation about the ethene bond in both mol-ecules is E. The crystal packing features C-H⋯O, C-H⋯π(ar-yl) and π-π [Cg⋯Cg = 3.6657 (8) and 3.7778 (8) Å] stacking inter-actions, which generate a three-dimensional network.
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Affiliation(s)
- Ignez Caracelli
- Departmento de Física, Universidade Federal de São Carlos, 13565-905 São Carlos, SP , Brazil
| | | | - Paulo J. S. Moran
- Instituto de Química, Universidade Estadual de Campinas, C.P. 6154, 13083-970 Campinas, SP, Brazil
| | - Bruno R. S. de Paula
- Instituto de Química, Universidade Estadual de Campinas, C.P. 6154, 13083-970 Campinas, SP, Brazil
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26380
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Kavitha HD, Vinduvahini M, Mahabhaleshwaraiah NM, Kotresh O, Devarajegowda HC. Crystal structure of (7-chloro-2-oxo-2H-chromen-4-yl)methyl N,N-di-methyl-carbamodi-thio-ate. Acta Crystallogr E Crystallogr Commun 2015; 71:o263-4. [PMID: 26029447 PMCID: PMC4438814 DOI: 10.1107/s2056989015005678] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2015] [Accepted: 03/19/2015] [Indexed: 11/30/2022]
Abstract
In the title compound, C13H12Cl N O2S2, the 2H-chromene ring system is almost planar, with a maximum deviation of 0.005 (2) Å. The packing features C-H⋯S hydrogen bonds and π-π inter-actions between fused benzene rings of chromene [shortest centroid-centroid distances = 3.6553 (13) and 3.5551 (13) Å].
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Affiliation(s)
- H. D. Kavitha
- Department of Physics, Govt. Science College, Hassan 573 201, Karnataka, India
| | - M. Vinduvahini
- Department of Physics, Sri D Devaraja Urs Govt. First Grade College, Hunsur-571105, Mysore District, Karnataka, India
| | - N. M. Mahabhaleshwaraiah
- Department of Chemistry, Karnatak University’s Karnatak Science College, Dharwad, Karnataka 580001, India
| | - O. Kotresh
- Department of Chemistry, Karnatak Science College, Karnatak University, Dharwad, Karnataka 580001, India
| | - H. C. Devarajegowda
- Department of Physics, Yuvaraja’s College (Constituent College), University of Mysore, Mysore 570 005, Karnataka, India
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26381
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Kim D, Kang SK. Crystal structure of catena-poly[[silver(I)-{μ-2,6-bis-[(1H-pyrazol-1-yl)meth-yl]pyridine-κ(3) N (1),N (2):N (2')}] nitrate]. Acta Crystallogr E Crystallogr Commun 2015; 71:m79-80. [PMID: 26029411 PMCID: PMC4438834 DOI: 10.1107/s2056989015004120] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2015] [Accepted: 02/26/2015] [Indexed: 11/23/2022]
Abstract
In the title complex, {[Ag(C13H13N5)]NO3} n , the Ag(I) atom is coordinated by three N atoms from two bidentate/monodentate pyrazolylpyridyl ligands to form a distorted trigonal-planar geometry [range of angles: 83.34 (6) (chelate ring) to 139.15 (7) °]. The chelate ring has a distorted boat conformation. The dihedral angle between the pyridyl ring and the coordinating pyrazolyl ring is 67.22 (6)°. The non-coordinating pyrazolyl ring is twisted by 62.97 (7)° from the pyridyl ring. In the crystal, the complex cations are arranged in polymeric chains along the c-axis direction, with the nitrate counter-anions situated in between. Weak C-H⋯O hydrogen bonds link the ions into a three-dimensional network.
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Affiliation(s)
- Daeyoung Kim
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
| | - Sung Kwon Kang
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
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26382
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Werner J, Jess I, Näther C. Crystal structure of bis-(4-acetyl-pyridine-κN)bis-(ethanol-κO)bis-(thio-cyanato-κN)manganese(II). Acta Crystallogr E Crystallogr Commun 2015; 71:m81-2. [PMID: 26029412 PMCID: PMC4438791 DOI: 10.1107/s2056989015004533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Accepted: 03/04/2015] [Indexed: 11/10/2022]
Abstract
In the crystal structure of the title compound, [Mn(NCS)2(C7H7NO)2(C2H5OH)2], the Mn(II) atom is coordin-ated by two N-bonded thio-cyanate anions, two 4-acetyl-pyridine ligands, and two ethanol mol-ecules within a slightly distorted octa-hedron. The asymmetric unit consits of one manganese cation, located on a centre of inversion, one thio-cyanate anion, one 4-acetyl-pyridine ligand and one ethanol mol-ecule in general positions. The discrete complexes are connected by inter-molecular O-H⋯O hydrogen bonds between the alcohol OH group and the carbonyl O atom into chains parallel to [011].
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Affiliation(s)
- Julia Werner
- Institut für Anorganische Chemie, Christian-Albrechts-Universität Kiel, Max-Eyth-Strasse 2, 24118 Kiel, Germany
| | - Inke Jess
- Institut für Anorganische Chemie, Christian-Albrechts-Universität Kiel, Max-Eyth-Strasse 2, 24118 Kiel, Germany
| | - Christian Näther
- Institut für Anorganische Chemie, Christian-Albrechts-Universität Kiel, Max-Eyth-Strasse 2, 24118 Kiel, Germany
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26383
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Pingali S, Donahue JP, Payton-Stewart F. Tetrahydroberberine, a pharmacologically active naturally occurring alkaloid. Acta Crystallogr C Struct Chem 2015; 71:262-5. [PMID: 25836282 PMCID: PMC4722501 DOI: 10.1107/s2053229615004076] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2015] [Accepted: 02/26/2015] [Indexed: 01/11/2023] Open
Abstract
Tetrahydroberberine (systematic name: 9,10-dimethoxy-5,8,13,13a-tetrahydro-6H-benzo[g][1,3]benzodioxolo[5,6-a]quinolizine), C20H21NO4, a widely distributed naturally occurring alkaloid, has been crystallized as a racemic mixture about an inversion center. A bent conformation of the molecule is observed, with an angle of 24.72 (5)° between the arene rings at the two ends of the reduced quinolizinium core. The intermolecular hydrogen bonds that play an apparent role in crystal packing are 1,3-benzodioxole -CH2···OCH3 and -OCH3···OCH3 interactions between neighboring molecules.
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Affiliation(s)
- Subramanya Pingali
- Department of Chemistry, Xavier University of New Orleans, 1 Drexel Drive, Box 114, New Orleans, Louisiana 70125, USA
| | - James P. Donahue
- Department of Chemistry, Tulane University, 6400 Freret Street, New Orleans, Louisiana 70118-5698, USA
| | - Florastina Payton-Stewart
- Department of Chemistry, Xavier University of New Orleans, 1 Drexel Drive, Box 114, New Orleans, Louisiana 70125, USA
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26384
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Setifi Z, Setifi F, Francuski BM, Novaković SB, Merazig H. Crystal structure of tetra-aqua-[2-(pyridin-2-yl)-1H-imidazole-κ(2) N (2),N (3)]iron(II) sulfate. Acta Crystallogr E Crystallogr Commun 2015; 71:346-9. [PMID: 26029386 PMCID: PMC4438855 DOI: 10.1107/s2056989015004417] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2015] [Accepted: 03/03/2015] [Indexed: 11/10/2022]
Abstract
In the title compound, [Fe(C8H7N3)(H2O)4]SO4, the central Fe(II) ion is octa-hedrally coordinated by two N atoms from the bidentate 2-(pyridin-2-yl)-1H-imidazole ligand and by four O atoms of the aqua ligands. The largest deviation from the ideal octa-hedral geometry is reflected by the small N-Fe-N bite angle of 76.0 (1)°. The Fe-N coordination bonds have markedly different lengths [2.1361 (17) and 2.243 (2) Å], with the shorter one to the pyrimidine N atom. The four Fe-O coordination bond lengths vary from 2.1191 (18) to 2.1340 (17) Å. In the crystal, the cations and anions are arranged by means of medium-strength O-H⋯O hydrogen bonds into layers parallel to the ab plane. Neighbouring layers further inter-connect by N-H⋯O hydrogen bonds involving the imidazole fragment as donor group to one sulfate O atom as an acceptor. The resulting three-dimensional network is consolidated by C-H⋯O, C-H⋯π and π-π inter-actions.
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Affiliation(s)
- Zouaoui Setifi
- Laboratoire de Chimie, Ingénierie Moléculaire et Nanostructures (LCIMN), Université Ferhat Abbas Sétif 1, Sétif 19000, Algeria
- Unité de Recherche de Chimie de l’Environnement et Moléculaire Structurale (CHEMS), Université Constantine 1, Constantine 25000, Algeria
| | - Fatima Setifi
- Laboratoire de Chimie, Ingénierie Moléculaire et Nanostructures (LCIMN), Université Ferhat Abbas Sétif 1, Sétif 19000, Algeria
| | - Bojana M. Francuski
- Vinča Institute of Nuclear Sciences, Laboratory of Theoretical Physics and Condensed Matter Physics, PO Box 522, University of Belgrade, 11001 Belgrade, Serbia
| | - Sladjana B. Novaković
- Vinča Institute of Nuclear Sciences, Laboratory of Theoretical Physics and Condensed Matter Physics, PO Box 522, University of Belgrade, 11001 Belgrade, Serbia
| | - Hocine Merazig
- Unité de Recherche de Chimie de l’Environnement et Moléculaire Structurale (CHEMS), Université Constantine 1, Constantine 25000, Algeria
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26385
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Ruddraraju KV, Hillebrand R, Barnes CL, Gates KS. Crystal structure of 5-{4'-[(2-{2-[2-(2-ammonio-eth-oxy)eth-oxy]eth-oxy}eth-yl)carbamo-yl]-4-meth-oxy-[1,1'-biphen-yl]-3-yl}-3-oxo-1,2,5-thia-diazo-lidin-2-ide 1,1-dioxide: a potential inhibitor of the enzyme protein tyrosine phosphatase 1B (PTP1B). Acta Crystallogr E Crystallogr Commun 2015; 71:336-8. [PMID: 26029383 PMCID: PMC4438830 DOI: 10.1107/s2056989015003850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2015] [Accepted: 02/24/2015] [Indexed: 11/10/2022]
Abstract
The title compound, C24H32N4O8S, (I), crystallizes as a zwitterion. The terminal amine N atom of the [(2-{2-[2-(2-ammonio-eth-oxy)eth-oxy]eth-oxy}eth-yl)carbamo-yl] side chain is protonated, while the 1,2,5-thia-diazo-lidin-3-one 1,1-dioxide N atom is deprotonated. The side chain is turned over on itself with an intra-molecular N-H⋯O hydrogen bond. The 1,2,5-thia-diazo-lidin-3-one 1,1-dioxide ring has an envelope conformation with the aryl-substituted N atom as the flap. Its mean plane is inclined by 62.87 (8)° to the aryl ring to which it is attached, while the aryl rings of the biphenyl unit are inclined to one another by 20.81 (8)°. In the crystal, mol-ecules are linked by N-H⋯O and N-H⋯N hydrogen bonds, forming slabs lying parallel to (010). Within the slabs there are C-H⋯O and C-H⋯N hydrogen bonds and C-H⋯π inter-actions present.
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Affiliation(s)
| | - Roman Hillebrand
- 125 Chemistry Bldg, University of Missouri Columbia, MO 65211, USA
| | | | - Kent S. Gates
- 125 Chemistry Bldg, University of Missouri Columbia, MO 65211, USA
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26386
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Kahlenberg V, Gelbrich T, Tessadri R, Klauser F. Crystal structure of cis-diamminebis(nitrito-κN)platinum(II). Acta Crystallogr E Crystallogr Commun 2015; 71:366-70. [PMID: 26029392 PMCID: PMC4438797 DOI: 10.1107/s2056989015004879] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2015] [Accepted: 03/10/2015] [Indexed: 12/03/2022]
Abstract
Single crystals of cis-[Pt(NO2)2(NH3)2], were obtained by means of hyper-saturation directly out of a plating electrolyte. The square-planar coordination environment of the divalent Pt(II) atom is formed by four N atoms belonging to two ammine and two monodentate nitrite ligands. The ligands adopt a cis configuration. The crystal structure contains stacks of close-packed mol-ecules which run parallel to [001]. There are nine crystallographically independent inter-molecular N-H⋯O hydrogen bonds, resulting in a hydrogen-bonded hxl-type framework in which each mol-ecule serves as an eight-connected node. Four of the nine distinct hydrogen bonds connect complexes which belong to the same close-packed column parallel to [001]. In contrast to the previously reported crystal structure of the trans isomer, the title structure does not display intra-molecular hydrogen bonding.
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Affiliation(s)
- Volker Kahlenberg
- University of Innsbruck, Institute of Mineralogy & Petrography, Innrain 52, A-6020 Innsbruck, Austria
| | - Thomas Gelbrich
- University of Innsbruck, Institute of Pharmacy, Innrain 80, 6020 Innsbruck, Austria
| | - Richard Tessadri
- University of Innsbruck, Institute of Mineralogy & Petrography, Innrain 52, A-6020 Innsbruck, Austria
| | - Frederik Klauser
- MED-EL Medical Electronics, Fürstenweg 77a, A-6020 Innsbruck, Austria
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26387
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Jeyaseelan S, Sowmya BR, Venkateshappa G, Raghavendra Kumar P, Palakshamurthy BS. Crystal structure of 1-benzyl-sulfonyl-1,2,3,4-tetra-hydro-quinoline. Acta Crystallogr E Crystallogr Commun 2015; 71:o249-50. [PMID: 26029439 PMCID: PMC4438803 DOI: 10.1107/s2056989015004727] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2015] [Accepted: 03/07/2015] [Indexed: 11/20/2022]
Abstract
In the title compound, C16H17NO2S, the heterocyclic ring adopts a half-chair conformation and the bond-angle sum at the N atom is 354.6°. The dihedral angle between the planes of the aromatic rings is 74.15 (10)°. In the crystal, mol-ecules are linked by weak C-H⋯O hydrogen bonds, generating C(8) and C(4) chains propagating along [100] and [010], respectively, which together generate (001) sheets.
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Affiliation(s)
- S. Jeyaseelan
- Department of Physics, St Philomena’s College (Autonomous), Mysore, Karnataka 570 015, India
| | - B. R. Sowmya
- Department of Studies and Research in Physics, U.C.S., Tumkur University, Tumkur, Karnataka 572 103, India
| | - G. Venkateshappa
- Department of Chemistry, Tumkur University, Tumkur, Karnataka 572 103, India
| | - P. Raghavendra Kumar
- Department of Studies and Research in Chemistry, Tumkur University, Tumkur University, Tumkur, Karnataka 572 103, India
| | - B. S. Palakshamurthy
- Department of Studies and Research in Physics, U.C.S., Tumkur University, Tumkur, Karnataka 572 103, India
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26388
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Mokhtaruddin NSM, Ravoof TBSA, Tahir MIM, Tiekink ERT. Crystal structure of 3-methyl-pyridine-2-carbaldehyde 4-methyl-thio-semi-carba-zone monohydrate. Acta Crystallogr E Crystallogr Commun 2015; 71:o253-4. [PMID: 26029441 PMCID: PMC4438841 DOI: 10.1107/s2056989015005034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2015] [Accepted: 03/12/2015] [Indexed: 11/10/2022]
Abstract
In the title hydrate, C9H12N4S·H2O (systematic name: 3-methyl-1-{(E)-[(3-methyl-pyridin-2-yl)methyl-idene]amino}-thio-urea monohydrate), a small twist is noted between the pyridine ring and the rest of the organic mol-ecule [dihedral angle = 6.96 (5)°]. The imine and pyridine N atoms are syn, and the amine H atoms are anti. The latter arrangement allows for the formation of an intra-molecular N-H⋯N(imine) hydrogen bond. Both the N-bonded H atoms form hydrogen bonds to symmetry-related water mol-ecules, and the latter forms O-H hydrogen bonds with the pyridine N and thione S atoms. These inter-actions lead to supra-molecular layers that stack along the a-axis direction with no specific inter-actions between them.
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26389
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Arias-Zárate D, Ballesteros-Rivas MF, Toscano RA, Valdés-Martínez J. Crystal structure of di-μ-hydroxido-bis-[aqua-(1,10-phenanthroline-κ(2) N,N')copper(II)] naphthalene-2,6-di-carboxyl-ate hexa-hydrate. Acta Crystallogr E Crystallogr Commun 2015; 71:360-2. [PMID: 26029390 PMCID: PMC4438840 DOI: 10.1107/s2056989015004338] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2015] [Accepted: 03/02/2015] [Indexed: 11/10/2022]
Abstract
In the title compound, [Cu2(OH)2(C12H8N2)2(H2O)2](C12H6O4)·6H2O, the two hydroxide groups bridge the two Cu(II) cations, forming a centrosymmetric binuclear complex cation, in which the Cu(II) cation is coordinated by a 1,10-phenanthroline (phen) mol-ecule, one water mol-ecule and two bridging hydroxide O atoms in a distorted N2O3 square-pyramidal coordination geometry. The naphthalene-2,6-di-carboxyl-ate anion is also located on an inversion centre. In the crystal, O-H⋯O hydrogen bonds link the cations, anions and lattice water mol-ecules into a three-dimensional supra-molecular architecture. Extensive π-π stacking is observed between the parallel or nearly parallel aromatic rings of adjacent phen ligands and naphthalenedi-carboxyl-ate anions, the centroid-to-centroid distances ranging from 3.4990 (16) to 3.8895 (16) Å.
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Affiliation(s)
- Daniela Arias-Zárate
- UVM Campus Toluca, Avenida las Palmas Poniente No. 439 San Jorge Pueblo Nuevo, CP 52164, Metepec, Estado de México, Mexico
| | - María Fernanda Ballesteros-Rivas
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Cd. México, 04510, Coyoacán, México D.F., Mexico
| | - Rubén A. Toscano
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Cd. México, 04510, Coyoacán, México D.F., Mexico
| | - Jesús Valdés-Martínez
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Cd. México, 04510, Coyoacán, México D.F., Mexico
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26390
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Hockley R, Irshad H, Sheriff TS, Motevalli M, Marinakis S. Crystal structure of bromido-nitro-syl-bis(tri-phenyl-phosphane-κP)nickel(II). Acta Crystallogr E Crystallogr Commun 2015; 71:m87-8. [PMID: 26029415 PMCID: PMC4438846 DOI: 10.1107/s2056989015004703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2015] [Accepted: 03/07/2015] [Indexed: 11/23/2022]
Abstract
The asymmetric unit of the title complex, [NiBr(NO){P(C6H5)3}2], comprises two independent mol-ecules each with a similar configuration. The Ni(II) cation is coordinated by one bromide anion, one nitrosyl anion and two tri-phenyl-phosphane mol-ecules in a distorted BrNP2 tetra-hedral coordination geometry. The coordination of the nitrosyl group is non-linear, the Ni-N-O angles being 150.2 (5) and 151.2 (5)° in the two independent mol-ecules. In the crystal, mol-ecules are linked by weak C-H⋯Br hydrogen bonds and weak C-H⋯π inter-actions into a three-dimensional supra-molecular architecture.
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Affiliation(s)
- Rose Hockley
- Department of Chemistry and Biochemistry, School of Biological and Chemical Sciences, Queen Mary University of London, Joseph Priestley Building, Mile End Road, London E1 4NS, England
| | - Hira Irshad
- Department of Chemistry and Biochemistry, School of Biological and Chemical Sciences, Queen Mary University of London, Joseph Priestley Building, Mile End Road, London E1 4NS, England
| | - Tippu S. Sheriff
- Department of Chemistry and Biochemistry, School of Biological and Chemical Sciences, Queen Mary University of London, Joseph Priestley Building, Mile End Road, London E1 4NS, England
| | - Majid Motevalli
- Department of Chemistry and Biochemistry, School of Biological and Chemical Sciences, Queen Mary University of London, Joseph Priestley Building, Mile End Road, London E1 4NS, England
| | - Sarantos Marinakis
- Department of Chemistry and Biochemistry, School of Biological and Chemical Sciences, Queen Mary University of London, Joseph Priestley Building, Mile End Road, London E1 4NS, England
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26391
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Mendoza MDLA, Bernès S, Mendoza-Díaz G. Crystal structure of {bis-[2-(3,5-di-methyl-pyrazol-1-yl-κN (2))eth-yl]amine-κN}chlorido-platinum(II) chloride dihydrate. Acta Crystallogr E Crystallogr Commun 2015; 71:m98-9. [PMID: 26029421 PMCID: PMC4438831 DOI: 10.1107/s2056989015005307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2015] [Accepted: 03/14/2015] [Indexed: 11/10/2022]
Abstract
The title complex, [PtCl(C14H23N5)]Cl·2H2O, is isomorphous with the Pd(II) compound characterized previously [Mendoza, Bernès & Mendoza-Díaz (2006 ▶). Acta Cryst. E62, m2934-m2936]. The angle between pyrazole mean planes in the main ligand is 88.3 (4)°, similar to that observed in the Pd(II) analogue [87.62 (11)°]. This tridentate ligand adopts a conformation approximating a twofold symmetry, allowing its coordination to the metal atom, together with a chloride ligand, in an almost perfect square-planar geometry. A chloride anion and two water mol-ecules in the asymmetric unit form a hydrogen-bonded network connected to the complex mol-ecules in the crystal via the NH amine groups, forming chains along [100].
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Affiliation(s)
- María de los Angeles Mendoza
- Departamento de Ingenierías Química Electrónica y Biomédica, División de Ciencias e Ingenierías, Campus León, Universidad de Guanajuato, Loma del Bosque 103, Lomas del Campestre, 37150 León, Gto, Mexico
| | - Sylvain Bernès
- Instituto de Física, Benemérita Universidad Autónoma de Puebla, Av. San Claudio y 18 Sur, 72570 Puebla, Pue., Mexico
| | - Guillermo Mendoza-Díaz
- Departamento de Ingenierías Química Electrónica y Biomédica, División de Ciencias e Ingenierías, Campus León, Universidad de Guanajuato, Loma del Bosque 103, Lomas del Campestre, 37150 León, Gto, Mexico
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26392
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Price IK, Rougeot C, Hein JE. Crystal structure of (S)-5,7-diphenyl-4,7-di-hydro-tetra-zolo[1,5-a]pyrimidine. Acta Crystallogr E Crystallogr Commun 2015; 71:o220-1. [PMID: 26029423 PMCID: PMC4438826 DOI: 10.1107/s2056989015002996] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2014] [Accepted: 02/11/2015] [Indexed: 11/11/2022]
Abstract
The title compound, C16H13N5, was synthesized by coupling amino-tetra-zole with chalcone in the presence of an amine organocatalyst derived from chincona alkaloid. There are two mol-ecules, A and B, in the asymmetric unit. In mol-ecule A, the dihedral angles between the partly hydrogenated pyrimidine ring system (r.m.s. deviation = 0.056 Å) and the sp (2)- and sp (3)-bonded phenyl groups are 33.32 (11) and 86.53 (11)°, respectively. The equivalent data for mol-ecule B are 0.049 Å, and 27.05 (10) and 85.27 (11)°, respectively. In the crystal, A+B dimers linked by pairs of N-H⋯N hydrogen bonds generate R 2 (2)(8) loops. The dimers are linked by aromatic π-π stacking inter-actions [shortest centroid-centroid separation = 3.5367 (15) Å], which results in a three-dimensional network.
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Affiliation(s)
- Ivy K. Price
- Chemistry and Chemical Biology, University of California, Merced, 5200 North Lake Road, Merced, CA 95343, USA
| | - Celine Rougeot
- Chemistry and Chemical Biology, University of California, Merced, 5200 North Lake Road, Merced, CA 95343, USA
| | - Jason E. Hein
- Chemistry and Chemical Biology, University of California, Merced, 5200 North Lake Road, Merced, CA 95343, USA
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26393
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Kaur M, Jasinski JP, Yathirajan HS, Kavitha CN, Glidewell C. The crystal structures of three clozapinium salts: different mol-ecular configurations, and supra-molecular assembly in one, two and three dimensions. Acta Crystallogr E Crystallogr Commun 2015; 71:406-13. [PMID: 26029402 PMCID: PMC4438793 DOI: 10.1107/s205698901500554x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2015] [Accepted: 03/18/2015] [Indexed: 11/22/2022]
Abstract
The structures of three salts derived from clozapine, 8-chloro-11-(4-methyl-piperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine, are reported, namely, clo-za-pin-ium 3,5-di-nitro-benzoate dimethyl sulfoxide monosolvate, C18H20ClN4 (+)·C7H3N2O6 (-)·C2H6OS, (I), where the dimethyl sulfoxide component is disordered over two sets of atomic sites having occupancies 0.627 (2) and 0.373 (2); clo-za-pin-ium hydrogen maleate 0.21-hydrate, C18H20ClN4 (+)·C4H3O4 (-)·0.21H2O, (II), and clozapinium 2-hy-droxy-benzoate, C18H20ClN4 (+)·C7H5O3 (-), (III). In all three salts, the protonation site is the methyl-ated N atom of the piperazine ring, and the dimensions and conformations of the fused tricyclic system are very similar. However, differences are apparent in the piperazine component: in both compounds (II) and (III), the unprotonated N atom of this ring has a pyramidal geometry, but in compound (I) this atom has a planar geometry. In compound (III), both N-substituents in this ring occupy equatorial sites, but in compound (II) the fused tricyclic system occupies an axial site of the piperazine ring. The independent components of compound (I) are linked within the selected asymmetric unit by a combination of N-H⋯O and C-H⋯O hydrogen bonds, and these hydrogen-bonded aggregates are linked into chains by an aromatic π-π stacking inter-action. In compound (II), the components are linked into sheets by a combination of O-H⋯O, N-H⋯O and C-H⋯O hydrogen bonds, and in compound (III), a combination of N-H⋯O, C-H⋯O and C-H⋯N hydrogen bonds links the components into a three-dimensional framework structure. Comparisons are made with some similar compounds.
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Affiliation(s)
- Manpreet Kaur
- Department of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India
| | - Jerry P. Jasinski
- Department of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA
| | - Hemmige S. Yathirajan
- Department of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India
| | - Channappa N. Kavitha
- Department of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India
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26394
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Lourenço LMO, Almeida Paz FA, Fernandes JA. Crystal structures of the water and acetone monosolvates of bis-[4'-(pyridin-4-yl)-2,2':6',2''-terpyridine]-manganese(II) bis-(hexa-fluorido-phosphate). Acta Crystallogr E Crystallogr Commun 2015; 71:330-5. [PMID: 26029382 PMCID: PMC4438851 DOI: 10.1107/s2056989015003503] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2015] [Accepted: 02/19/2015] [Indexed: 11/17/2022]
Abstract
The crystal structures of bis-[4'-(pyridin-4-yl)-2,2':6',2''-terpyridine]-man-gan-ese(II) bis-(hexa-fluorido-phosphate) monohydrate, [Mn(C20H14N4)2](PF6)2·H2O, (1), and bis-[4'-(pyridin-4-yl)-2,2':6',2''-terpyridine]-manganese(II) bis(hexa-fluorido-phosphate) acetone monosolvate, (2), [Mn(C20H14N4)2](PF6)2·CH3COCH3, are described. At 150 K, (1) and (2) have monoclinic (P21/c) and ortho-rhom-bic (C2221) symmetries, respectively. Both structures exhibit octahedrally coordinated Mn(II) atoms and disorder. They display weak inter-actions, such as C-H⋯F, C-H⋯N, C-H⋯π, F⋯π and π-π. The twofold rotation axis in the molecule of (2) is coincident with a twofold rotation axis of the crystal.
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Affiliation(s)
- Leandro M. O. Lourenço
- CICECO, Chemistry Department, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
| | - Filipe A. Almeida Paz
- CICECO, Chemistry Department, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
| | - José A. Fernandes
- CICECO, Chemistry Department, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
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26395
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Sereda O, Stoeckli-Evans H. Crystal structures of {[Cu(Lpn)2][Fe(CN)5(NO)]·H2O} n and {[Cu(Lpn)2]3[Cr(CN)6]2·5H2O} n [where Lpn = (R)-propane-1,2-di-amine]: two heterometallic chiral cyanide-bridged coordination polymers. Acta Crystallogr E Crystallogr Commun 2015; 71:392-7. [PMID: 26029399 PMCID: PMC4438836 DOI: 10.1107/s2056989015005253] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2015] [Accepted: 03/14/2015] [Indexed: 11/17/2022]
Abstract
The title compounds, catena-poly[[[bis-[(R)-propane-1,2-di-amine-κ(2) N,N']copper(II)]-μ-cyanido-κ(2) N:C-[tris-(cyanido-κC)(nitroso-κN)iron(III)]-μ-cyanido-κ(2) C:N] monohydrate], {[Cu(Lpn)2][Fe(CN)5(NO)]·H2O} n , (I), and poly[[hexa-μ-cyanido-κ(12) C:N-hexa-cyanido-κ(6) C-hexa-kis-[(R)-propane-1,2-di-amine-κ(2) N,N']dichromium(III)tricopper(II)] penta-hydrate], {[Cu(Lpn)2]3[Cr(CN)6]2·5H2O} n , (II) [where Lpn = (R)-propane-1,2-di-amine, C3H10N2], are new chiral cyanide-bridged bimetallic coordination polymers. The asymmetric unit of compound (I) is composed of two independent cation-anion units of {[Cu(Lpn)2][Fe(CN)5)(NO)]} and two water mol-ecules. The Fe(III) atoms have distorted octa-hedral geometries, while the Cu(II) atoms can be considered to be penta-coordinate. In the crystal, however, the units align to form zigzag cyanide-bridged chains propagating along [101]. Hence, the Cu(II) atoms have distorted octa-hedral coordination spheres with extremely long semicoordination Cu-N(cyanido) bridging bonds. The chains are linked by O-H⋯N and N-H⋯N hydrogen bonds, forming two-dimensional networks parallel to (010), and the networks are linked via N-H⋯O and N-H⋯N hydrogen bonds, forming a three-dimensional framework. Compound (II) is a two-dimensional cyanide-bridged coordination polymer. The asymmetric unit is composed of two chiral {[Cu(Lpn)2][Cr(CN)6]}(-) anions bridged by a chiral [Cu(Lpn)2](2+) cation and five water mol-ecules of crystallization. Both the Cr(III) atoms and the central Cu(II) atom have distorted octa-hedral geometries. The coordination spheres of the outer Cu(II) atoms of the asymmetric unit can be considered to be penta-coordinate. In the crystal, these units are bridged by long semicoordination Cu-N(cyanide) bridging bonds forming a two-dimensional network, hence these Cu(II) atoms now have distorted octa-hedral geometries. The networks, which lie parallel to (10-1), are linked via O-H⋯O, O-H⋯N, N-H⋯O and N-H⋯N hydrogen bonds involving all five non-coordinating water mol-ecules, the cyanide N atoms and the NH2 groups of the Lpn ligands, forming a three-dimensional framework.
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Affiliation(s)
- Olha Sereda
- Institute of Physics, University of Neuchâtel, Rue Emile-Argand 11, CH-2000 Neuchâtel, Switzerland
| | - Helen Stoeckli-Evans
- Institute of Physics, University of Neuchâtel, Rue Emile-Argand 11, CH-2000 Neuchâtel, Switzerland
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26396
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Kovač S, Karanović L, Đorđević T. An investigation of polyhedral deformation in two mixed-metal diarsenates: SrZnAs₂O₇ and BaCuAs₂O₇. Acta Crystallogr C Struct Chem 2015; 71:330-7. [PMID: 25836295 DOI: 10.1107/s2053229615005616] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2015] [Accepted: 03/18/2015] [Indexed: 11/10/2022] Open
Abstract
Two isostructural diarsenates, SrZnAs2O7 (strontium zinc diarsenate), (I), and BaCuAs2O7 [barium copper(II) diarsenate], (II), have been synthesized under hydrothermal conditions and characterized by single-crystal X-ray diffraction. The three-dimensional open-framework crystal structure consists of corner-sharing M2O5 (M2 = Zn or Cu) square pyramids and diarsenate (As2O7) groups. Each As2O7 group shares its five corners with five different M2O5 square pyramids. The resulting framework delimits two types of tunnels aligned parallel to the [010] and [100] directions where the large divalent nine-coordinated M1 (M1 = Sr or Ba) cations are located. The geometrical characteristics of the M1O9, M2O5 and As2O7 groups of known isostructural diarsenates, adopting the general formula M1(II)M2(II)As2O7 (M1(II) = Sr, Ba, Pb; M2(II) = Mg, Co, Cu, Zn) and crystallizing in the space group P2₁/n, are presented and discussed.
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Affiliation(s)
- Sabina Kovač
- University of Belgrade, Faculty of Mining and Geology, Laboratory of Crystallography, Đušina 7, 11000 Belgrade, Serbia
| | - Ljiljana Karanović
- University of Belgrade, Faculty of Mining and Geology, Laboratory of Crystallography, Đušina 7, 11000 Belgrade, Serbia
| | - Tamara Đorđević
- Universität Wien, Institut für Mineralogie und Kristallographie, Althansstrasse 14, A-1090 Vienna, Austria
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26397
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Annie CF, Sithambaresan M, Kurup MRP. Crystal structure of (E)-2-[(2-hy-droxy-4-meth-oxy-phen-yl)(phen-yl)methyl-idene]-N-phenyl-hydrazine-1-carboxamide. Acta Crystallogr E Crystallogr Commun 2015; 71:427-30. [PMID: 26029407 PMCID: PMC4438824 DOI: 10.1107/s2056989015005757] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2015] [Accepted: 03/22/2015] [Indexed: 11/10/2022]
Abstract
The title compound, C21H19N3O3, has an E conformation about the azomethine double bond. The central moiety of the hydrazinecarboxamide moiety [-N-N-C(=O)-N-] has an almost coplanar arrangement [maximum deviation for the C atom = 0.010 (2) Å]. This central moiety is flanked by three aromatic rings and its mean plane makes dihedral angles of 24.7 (1), 72.91 (12) and 34.26 (11) Å, respectively, with the phenolic ring, the phenyl ring attached to the same C atom as the phenolic ring, and the phenyl-hydrazine ring. The adjacent phenolic and phenyl rings are twisted away from each other to reduce steric hindrance and make a dihedral angle of 80.59 (12)°. The phenolic and phenyl-hydrazine rings are inclined to one another by 28.89 (11)°. The rigidity of the mol-ecule is increased by an intra-molecular O-H⋯N hydrogen bond involving the phenolic hydrogen and the azomethine N atom. In the crystal, the carbonyl O atom forms bifurcated hydrogen bonds with the two NH atoms of the hydrazinic group, leading to the formation of chains propagating along [001]. Within the chains there are also C-H⋯O hydrogen bonds present. The chains are linked via C=O⋯π [3.4316 (18) Å] and parallel slipped π-π inter-actions, involving inversion-related benzene rings [centroid-centroid distance = 3.8850 (14) Å; inter-planar distance = 3.3895 (10) Å; slippage = 1.899 Å], forming sheets lying parallel to (100).
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Affiliation(s)
- C. F. Annie
- Department of Applied Chemistry, Cochin University of Science and Technology, Kochi 682 022, India
| | - M. Sithambaresan
- Department of Chemistry, Faculty of Science, Eastern University, Chenkalady, Sri Lanka
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26398
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Nimthong-Roldán A, Wattanakanjana Y, Rodkeaw J. Crystal structure of tris-[μ2-bis-(di-phenyl-phosphan-yl)methane-κ(2) P:P']di-μ3-bromido-tris-ilver(I) bromide-N,N'-phenyl-thio-urea (1/1). Acta Crystallogr E Crystallogr Commun 2015; 71:m89-90. [PMID: 26029416 PMCID: PMC4438794 DOI: 10.1107/s2056989015005150] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2015] [Accepted: 03/13/2015] [Indexed: 05/23/2024]
Abstract
The title complex, [Ag3Br2(C25H22P2)3]Br·C7H8N2S, comprises a trinuclear [Ag3Br2(C25H22P2)3](+) unit, a Br(-) anion and one N,N'-di-methyl-thio-urea mol-ecule (ptu). Three Ag(I) ions are linked via two μ3-bridging Br atoms, leading to a distorted triangular bipyramid with an Ag⋯Ag separation range of 3.1046 (6)-3.3556 (6) Å. The triangular Ag3 arrangement is stabilized by six P atoms from three chelating bis-(di-phenyl-phosphan-yl)methane (dppm) ligands. The Ag(I) ion presents a distorted tetra-hedral coordination geometry. In the crystal, the bromide anion is connected to the ptu mol-ecule through N-H⋯Br hydrogen bonds [graph-set motif R 2 (1)(6)]. Each bromide/ptu aggregate links the complex ion via C-H⋯S and C-H⋯Br hydrogen bonds, leading to the formation of a three-dimensional network. Two phenyl rings from two dppm ligands were modelled as disordered over two sites.
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Affiliation(s)
| | - Yupa Wattanakanjana
- Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla 90112, Thailand
| | - Jintana Rodkeaw
- Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla 90112, Thailand
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26399
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Stierle A, Stierle D, Decato D. Redetermination and absolute configuration of berkeleydione. Acta Crystallogr E Crystallogr Commun 2015; 71:o248. [PMID: 26029438 PMCID: PMC4438833 DOI: 10.1107/s2056989015003965] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2015] [Accepted: 02/25/2015] [Indexed: 11/26/2022]
Abstract
The crystal structure of the title compound, berkeleydione [systematic name; (5aS,7R,9S,11R,11aS)-methyl 9-hy-droxy-1,1,5,7,9,11a-hexa-methyl-14-methyl-idene-3,8,10-trioxo-1,3,4,5a,6,7,8,9,10,11,11a,12-dodeca-hydro-7,11-methano-cycloocta-[4,5]cyclo-hepta-[1,2-c]pyran-11-carboxyl-ate], C26H32O7, has been reported previously [Stierle et al. (2004 ▶). Org. Lett. 6, 1049-1052]. However, the absolute configuration could not be determined from the data collected with Mo Kα radiation and has now been determined by refinement of the Flack parameter with data collected using Cu Kα radiation. It is in agreement with the previous circular dichroism assignment, and the crystal packing is similar to that described previously.
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Affiliation(s)
- Andrea Stierle
- Department of Biological and Pharmaceutical Sciences, University of Montana, 32 Campus Dr., Missoula, Montana 59812, USA
| | - Donald Stierle
- Department of Biological and Pharmaceutical Sciences, University of Montana, 32 Campus Dr., Missoula, Montana 59812, USA
| | - Daniel Decato
- Department of Biological and Pharmaceutical Sciences, University of Montana, 32 Campus Dr., Missoula, Montana 59812, USA
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26400
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Danish M, Tahir MN, Anwar U, Raza MA. Crystal structure of ethyl N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-di-hydro-1H-pyrazol-4-yl)carbamate. Acta Crystallogr E Crystallogr Commun 2015; 71:o267. [PMID: 26029449 PMCID: PMC4438802 DOI: 10.1107/s2056989015006106] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Accepted: 03/25/2015] [Indexed: 11/25/2022]
Abstract
In the title compound, C14H17N3O3, the dihedral angle between the benzene ring and the five-membered di-hydro-pyrazole ring is 52.26 (9)°. The ethyl ester group is approximately planar (r.m.s. deviation 0.0568 Å) and subtends an angle 67.73 (8)° to the pyrazole ring. In the crystal, molecules are linked by pairs of N-H⋯O hydrogen bonds, forming inversion dimers with an R 2 (2)(10) ring motif. Weaker C-H⋯O contacts link these dimers into a three-dimensional network of mol-ecules stacked along the a-axis direction. Offset π-π stacking inter-actions between the benzene rings [centroid-to-centroid distance = 3.8832 (12) Å] further stabilize the crystal packing.
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Affiliation(s)
- Muhammad Danish
- Department of Chemistry, Institute of Natural Sciences, University of Gujrat, Gujrat 50700, Pakistan
| | | | - Uzma Anwar
- Department of Chemistry, Institute of Natural Sciences, University of Gujrat, Gujrat 50700, Pakistan
| | - Muhammad Asam Raza
- Department of Chemistry, Institute of Natural Sciences, University of Gujrat, Gujrat 50700, Pakistan
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