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Wang C, Lai Z, Huang G, Pan H. Current State of [Fe]‐Hydrogenase and Its Biomimetic Models. Chemistry 2022; 28:e202201499. [DOI: 10.1002/chem.202201499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2022] [Indexed: 11/11/2022]
Affiliation(s)
- Chao Wang
- Chemistry and Biomedicine Innovation Center (ChemBIC) State Key Laboratory of Coordination Chemistry School of Chemistry and Chemical Engineering Nanjing University 163 Xianlin Avenue 210023 Nanjing P. R. China
| | - Zhenli Lai
- Key Laboratory of Development and Application of Rural Renewable Energy Biogas Institute of Ministry of Agriculture and Rural Affairs Section 4–13, Renmin South Road 610041 Chengdu P. R. China
| | - Gangfeng Huang
- Key Laboratory of Development and Application of Rural Renewable Energy Biogas Institute of Ministry of Agriculture and Rural Affairs Section 4–13, Renmin South Road 610041 Chengdu P. R. China
| | - Hui‐Jie Pan
- Chemistry and Biomedicine Innovation Center (ChemBIC) State Key Laboratory of Coordination Chemistry School of Chemistry and Chemical Engineering Nanjing University 163 Xianlin Avenue 210023 Nanjing P. R. China
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Schaupp S, Arriaza‐Gallardo FJ, Pan H, Kahnt J, Angelidou G, Paczia N, Costa K, Hu X, Shima S. In Vitro Biosynthesis of the [Fe]-Hydrogenase Cofactor Verifies the Proposed Biosynthetic Precursors. Angew Chem Int Ed Engl 2022; 61:e202200994. [PMID: 35286742 PMCID: PMC9314073 DOI: 10.1002/anie.202200994] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Indexed: 02/06/2023]
Abstract
In the FeGP cofactor of [Fe]-hydrogenase, low-spin FeII is in complex with two CO ligands and a pyridinol derivative; the latter ligates the iron with a 6-acylmethyl substituent and the pyridinol nitrogen. A guanylylpyridinol derivative, 6-carboxymethyl-3,5-dimethyl-4-guanylyl-2-pyridinol (3), is produced by the decomposition of the FeGP cofactor under irradiation with UV-A/blue light and is also postulated to be a precursor of FeGP cofactor biosynthesis. HcgC and HcgB catalyze consecutive biosynthesis steps leading to 3. Here, we report an in vitro biosynthesis assay of the FeGP cofactor using the cell extract of the ΔhcgBΔhcgC strain of Methanococcus maripaludis, which does not biosynthesize 3. We chemically synthesized pyridinol precursors 1 and 2, and detected the production of the FeGP cofactor from 1, 2 and 3. These results indicated that 1, 2 and 3 are the precursors of the FeGP cofactor, and the carboxy group of 3 is converted to the acyl ligand.
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Affiliation(s)
- Sebastian Schaupp
- Max Planck Institute for Terrestrial MicrobiologyKarl-von-Frisch-Straße 1035043MarburgGermany
| | | | - Hui‐jie Pan
- Laboratory of Inorganic Synthesis and CatalysisInstitute of Chemical Sciences and EngineeringEcole Polytechnique Fédérale de Lausanne (EPFL) ISIC-LSCI, BCH 33051015LausanneSwitzerland
| | - Jörg Kahnt
- Max Planck Institute for Terrestrial MicrobiologyKarl-von-Frisch-Straße 1035043MarburgGermany
| | - Georgia Angelidou
- Max Planck Institute for Terrestrial MicrobiologyKarl-von-Frisch-Straße 1035043MarburgGermany
| | - Nicole Paczia
- Max Planck Institute for Terrestrial MicrobiologyKarl-von-Frisch-Straße 1035043MarburgGermany
| | - Kyle Costa
- Department of Plant and Microbial BiologyUniversity of MinnesotaTwin CitiesSt. Paul, MNUSA
| | - Xile Hu
- Laboratory of Inorganic Synthesis and CatalysisInstitute of Chemical Sciences and EngineeringEcole Polytechnique Fédérale de Lausanne (EPFL) ISIC-LSCI, BCH 33051015LausanneSwitzerland
| | - Seigo Shima
- Max Planck Institute for Terrestrial MicrobiologyKarl-von-Frisch-Straße 1035043MarburgGermany
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3
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Schaupp S, Arriaza‐Gallardo FJ, Pan H, Kahnt J, Angelidou G, Paczia N, Costa K, Hu X, Shima S. In Vitro Biosynthesis of the [Fe]‐Hydrogenase Cofactor Verifies the Proposed Biosynthetic Precursors. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202200994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Sebastian Schaupp
- Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch-Straße 10 35043 Marburg Germany
| | | | - Hui‐jie Pan
- Laboratory of Inorganic Synthesis and Catalysis Institute of Chemical Sciences and Engineering Ecole Polytechnique Fédérale de Lausanne (EPFL) ISIC-LSCI, BCH 3305 1015 Lausanne Switzerland
| | - Jörg Kahnt
- Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch-Straße 10 35043 Marburg Germany
| | - Georgia Angelidou
- Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch-Straße 10 35043 Marburg Germany
| | - Nicole Paczia
- Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch-Straße 10 35043 Marburg Germany
| | - Kyle Costa
- Department of Plant and Microbial Biology University of Minnesota Twin Cities St. Paul, MN USA
| | - Xile Hu
- Laboratory of Inorganic Synthesis and Catalysis Institute of Chemical Sciences and Engineering Ecole Polytechnique Fédérale de Lausanne (EPFL) ISIC-LSCI, BCH 3305 1015 Lausanne Switzerland
| | - Seigo Shima
- Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch-Straße 10 35043 Marburg Germany
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Song L, Liu B, Xu K. Synthetic and Structural Studies on a New Type of [Fe]‐Hydrogenase Mimics Each Containing One Hantzsch Ester Moiety. Eur J Inorg Chem 2020. [DOI: 10.1002/ejic.202000523] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Li‐Cheng Song
- Department of Chemistry State Key Laboratory of Elemento‐Organic Chemistry Nankai University 300071 Tianjin China
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin) 300072 Tianjin China
| | - Bei‐Bei Liu
- Department of Chemistry State Key Laboratory of Elemento‐Organic Chemistry Nankai University 300071 Tianjin China
| | - Kai‐Kai Xu
- Department of Chemistry State Key Laboratory of Elemento‐Organic Chemistry Nankai University 300071 Tianjin China
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Pan HJ, Hu X. Biomimetic Hydrogenation Catalyzed by a Manganese Model of [Fe]-Hydrogenase. Angew Chem Int Ed Engl 2020; 59:4942-4946. [PMID: 31820844 DOI: 10.1002/anie.201914377] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Indexed: 12/16/2022]
Abstract
[Fe]-hydrogenase is an efficient biological hydrogenation catalyst. Despite intense research, Fe complexes mimicking the active site of [Fe]-hydrogenase have not achieved turnovers in hydrogenation reactions. Herein, we describe the design and development of a manganese(I) mimic of [Fe]-hydrogenase. This complex exhibits the highest activity and broadest scope in catalytic hydrogenation among known mimics. Thanks to its biomimetic nature, the complex exhibits unique activity in the hydrogenation of compounds analogous to methenyl-H4 MPT+ , the natural substrate of [Fe]-hydrogenase. This activity enables asymmetric relay hydrogenation of benzoxazinones and benzoxazines, involving the hydrogenation of a chiral hydride transfer agent using our catalyst coupled to Lewis acid-catalyzed hydride transfer from this agent to the substrates.
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Affiliation(s)
- Hui-Jie Pan
- Laboratory of Inorganic Synthesis and Catalysis, Institute of Chemical Sciences and Engineering, École Polytechnique Fédérale de Lausanne (EPFL), ISIC-LSCI, BCH 3305, Lausanne, 1015, Switzerland
| | - Xile Hu
- Laboratory of Inorganic Synthesis and Catalysis, Institute of Chemical Sciences and Engineering, École Polytechnique Fédérale de Lausanne (EPFL), ISIC-LSCI, BCH 3305, Lausanne, 1015, Switzerland
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6
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Pan H, Hu X. Biomimetic Hydrogenation Catalyzed by a Manganese Model of [Fe]‐Hydrogenase. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201914377] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Hui‐Jie Pan
- Laboratory of Inorganic Synthesis and CatalysisInstitute of Chemical Sciences and EngineeringÉcole Polytechnique Fédérale de Lausanne (EPFL), ISIC-LSCI BCH 3305 Lausanne 1015 Switzerland
| | - Xile Hu
- Laboratory of Inorganic Synthesis and CatalysisInstitute of Chemical Sciences and EngineeringÉcole Polytechnique Fédérale de Lausanne (EPFL), ISIC-LSCI BCH 3305 Lausanne 1015 Switzerland
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Kerns SA, Magtaan AC, Vong PR, Rose MJ. Functional Hydride Transfer by a Thiolate-Containing Model of Mono-Iron Hydrogenase featuring an Anthracene Scaffold. Angew Chem Int Ed Engl 2018; 57:2855-2858. [DOI: 10.1002/anie.201712948] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2017] [Indexed: 11/11/2022]
Affiliation(s)
- Spencer A. Kerns
- Department of Chemistry; The University of Texas at Austin; Austin TX 78712 USA
| | | | - Pisey R. Vong
- Department of Chemistry; The University of Texas at Austin; Austin TX 78712 USA
| | - Michael J. Rose
- Department of Chemistry; The University of Texas at Austin; Austin TX 78712 USA
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Kerns SA, Magtaan AC, Vong PR, Rose MJ. Functional Hydride Transfer by a Thiolate-Containing Model of Mono-Iron Hydrogenase featuring an Anthracene Scaffold. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712948] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Spencer A. Kerns
- Department of Chemistry; The University of Texas at Austin; Austin TX 78712 USA
| | | | - Pisey R. Vong
- Department of Chemistry; The University of Texas at Austin; Austin TX 78712 USA
| | - Michael J. Rose
- Department of Chemistry; The University of Texas at Austin; Austin TX 78712 USA
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Weismann J, Waterman R, Gessner VH. Metal-Ligand Cooperativity in a Methandiide-Derived Iridium Carbene Complex. Chemistry 2016; 22:3846-55. [DOI: 10.1002/chem.201503936] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2015] [Indexed: 11/09/2022]
Affiliation(s)
- Julia Weismann
- Institut für Anorganische Chemie; Julius-Maximilians-Universität Würzburg; Am Hubland 97074 Würzburg Germany
| | - Rory Waterman
- Department of Chemistry; University of Vermont; Burlington Vermont 05405 USA
| | - Viktoria H. Gessner
- Institut für Anorganische Chemie; Julius-Maximilians-Universität Würzburg; Am Hubland 97074 Würzburg Germany
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Murray KA, Wodrich MD, Hu X, Corminboeuf C. Toward functional type III [Fe]-hydrogenase biomimics for H2 activation: insights from computation. Chemistry 2015; 21:3987-96. [PMID: 25649221 DOI: 10.1002/chem.201405619] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2014] [Indexed: 11/06/2022]
Abstract
The chemistry of [Fe]-hydrogenase has attracted significant interest due to its ability to activate molecular hydrogen. The intriguing properties of this enzyme have prompted the synthesis of numerous small molecule mimics aimed at activating H2. Despite considerable effort, a majority of these compounds remain nonfunctional for hydrogenation reactions. By using a recently synthesized model as an entry point, seven biomimetic complexes have been examined through DFT computations to probe the influence of ligand environment on the ability of a mimic to bind and split H2. One mimic, featuring a bidentate diphosphine group incorporating an internal nitrogen base, was found to have particularly attractive energetics, prompting a study of the role played by the proton/hydride acceptor necessary to complete the catalytic cycle. Computations revealed an experimentally accessible energetic pathway involving a benzaldehyde proton/hydride acceptor and the most promising catalyst.
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Affiliation(s)
- Kevin A Murray
- Laboratory for Computational Molecular Design, Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne, 1015 Lausanne (Switzerland)
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Becker J, Modl T, Gessner VH. Methandiide as a Non-Innocent Ligand in Carbene Complexes: From the Electronic Structure to Bond Activation Reactions and Cooperative Catalysis. Chemistry 2014; 20:11295-9. [DOI: 10.1002/chem.201404131] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2014] [Indexed: 11/06/2022]
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Hu B, Chen D, Hu X. Synthesis and Reactivity of Mononuclear Iron Models of [Fe]-Hydrogenase that Contain an Acylmethylpyridinol Ligand. Chemistry 2014; 20:1677-82. [DOI: 10.1002/chem.201304290] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2013] [Indexed: 11/06/2022]
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13
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Tamura H, Salomone-Stagni M, Fujishiro T, Warkentin E, Meyer-Klaucke W, Ermler U, Shima S. Crystal Structures of [Fe]-Hydrogenase in Complex with Inhibitory Isocyanides: Implications for the H2-Activation Site. Angew Chem Int Ed Engl 2013; 52:9656-9. [DOI: 10.1002/anie.201305089] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2013] [Indexed: 01/08/2023]
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14
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Crystal Structures of [Fe]-Hydrogenase in Complex with Inhibitory Isocyanides: Implications for the H2-Activation Site. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201305089] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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17
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Schultz KM, Chen D, Hu X. [Fe]-Hydrogenase and Models that Contain IronAcyl Ligation. Chem Asian J 2013; 8:1068-75. [DOI: 10.1002/asia.201300232] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2013] [Indexed: 11/06/2022]
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18
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Wodrich MD, Hu X. Electronic Elements Governing the Binding of Small Molecules to a [Fe]-Hydrogenase Mimic. Eur J Inorg Chem 2013. [DOI: 10.1002/ejic.201300081] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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19
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Hu B, Chen D, Hu X. Reversible Dimerization of Mononuclear Models of [Fe]-Hydrogenase. Chemistry 2013; 19:6221-4. [DOI: 10.1002/chem.201300495] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2013] [Indexed: 11/12/2022]
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21
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Praneeth VKK, Ringenberg MR, Ward TR. Redox-Active Ligands in Catalysis. Angew Chem Int Ed Engl 2012; 51:10228-34. [DOI: 10.1002/anie.201204100] [Citation(s) in RCA: 277] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2012] [Indexed: 11/10/2022]
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22
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Yao L, Qin L, Yu S. Self‐Assembly of Nano‐Sized Neutral Metal–Organic Macrocycles from Bis(β‐diketone) Ligands. Chem Asian J 2012; 7:2555-8. [DOI: 10.1002/asia.201200588] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2012] [Indexed: 01/23/2023]
Affiliation(s)
- Liao‐Yuan Yao
- Laboratory for Self‐Assembly Chemistry, Department of Chemistry, Renmin University of China, Beijing 100872 (P.R. China), Fax: (+86) 10‐6251‐6614
| | - Lin Qin
- Laboratory for Self‐Assembly Chemistry, Department of Chemistry, Renmin University of China, Beijing 100872 (P.R. China), Fax: (+86) 10‐6251‐6614
| | - Shu‐Yan Yu
- Laboratory for Self‐Assembly Chemistry, Department of Chemistry, Renmin University of China, Beijing 100872 (P.R. China), Fax: (+86) 10‐6251‐6614
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Hu B, Chen D, Hu X. A Pyridinol Acyl Cofactor in the Active Site of [Fe]-hydrogenase Evidenced by the Reactivity of Model Complexes. Chemistry 2012; 18:11528-30. [DOI: 10.1002/chem.201201954] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2012] [Indexed: 11/11/2022]
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Chen D, Scopelliti R, Hu X. Reversible Protonation of a Thiolate Ligand in an [Fe]-Hydrogenase Model Complex. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201107634] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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25
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Chen D, Scopelliti R, Hu X. Reversible Protonation of a Thiolate Ligand in an [Fe]-Hydrogenase Model Complex. Angew Chem Int Ed Engl 2012; 51:1919-21. [DOI: 10.1002/anie.201107634] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2011] [Indexed: 11/07/2022]
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Wacker-Siliconpreis: M. Drieß / Nationaler Latsis-Preis: K. Gademann / OMCOS-Preis: F. Glorius / Werner-Preis: X. Hu. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201107080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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