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Nielsen MM, Holmstrøm T, Pedersen CM. Stereoselective
O
‐Glycosylations by Pyrylium Salt Organocatalysis**. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202115394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Michael Martin Nielsen
- University of Copenhagen Department of Chemistry Universitetsparken 5 2100 Copenhagen O Denmark
| | - Thomas Holmstrøm
- University of Copenhagen Department of Chemistry Universitetsparken 5 2100 Copenhagen O Denmark
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Nielsen MM, Holmstrøm T, Pedersen CM. Stereoselective O-Glycosylations by Pyrylium Salt Organocatalysis. Angew Chem Int Ed Engl 2021; 61:e202115394. [PMID: 34847269 DOI: 10.1002/anie.202115394] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Indexed: 01/06/2023]
Abstract
Despite many years of invention, the field of carbohydrate chemistry remains rather inaccessible to non-specialists, which limits the scientific impact and reach of the discoveries made in the field. Aiming to increase the availability of stereoselective glycosylation chemistry for non-specialists, we have discovered that several commercially available pyrylium salts catalyze stereoselective O-glycosylations of a wide range of phenols and alkyl alcohols. This catalytic reaction utilizes trichloroacetimidates, an easily accessible and synthetically proven electrophile, takes place under air and only initiates when all three reagents are mixed, which should provide better reproducibility by non-specialists. The reaction exhibits varying degrees of stereospecificity, resulting in β-selective glycosylations from α-trichloroacetimidates, whilst an α-selective glycosylation proceeds from β-trichloroacetimidates. A mechanistic study revealed that the reaction likely proceeds via an SN 2-like substitution on the protonated electrophile.
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Affiliation(s)
- Michael Martin Nielsen
- University of Copenhagen, Department of Chemistry, Universitetsparken 5, 2100, Copenhagen O, Denmark
| | - Thomas Holmstrøm
- University of Copenhagen, Department of Chemistry, Universitetsparken 5, 2100, Copenhagen O, Denmark
| | - Christian Marcus Pedersen
- University of Copenhagen, Department of Chemistry, Universitetsparken 5, 2100, Copenhagen O, Denmark
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Liu M, Qin X, Ye XS. Glycan Assembly Strategy: From Concept to Application. CHEM REC 2021; 21:3256-3277. [PMID: 34498347 DOI: 10.1002/tcr.202100183] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 08/30/2021] [Indexed: 12/11/2022]
Abstract
Glycans have been hot topics in recent years due to their exhibition of numerous biological activities. However, the heterogeneity of their natural source and the complexity of their chemical synthesis impede the progress in their biological research. Thus, the development of glycan assembly strategies to acquire plenty of structurally well-defined glycans is an important issue in carbohydrate chemistry. In this review, the latest advances in glycan assembly strategies from concepts to their applications in carbohydrate synthesis, including chemical and enzymatic/chemo-enzymatic approaches, as well as solution-phase and solid-phase/tag-assisted synthesis, are summarized. Furthermore, the automated glycan assembly techniques are also outlined.
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Affiliation(s)
- Mingli Liu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Xianjin Qin
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Xin-Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
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Li J, Nguyen HM. A Mechanistic Probe into 1,2- cis Glycoside Formation Catalyzed by Phenanthroline and Further Expansion of Scope. Adv Synth Catal 2021; 363:4054-4066. [PMID: 35431716 PMCID: PMC9009828 DOI: 10.1002/adsc.202100639] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2021] [Indexed: 12/20/2022]
Abstract
Phenanthroline, a rigid and planar compound with two fused pyridine rings, has been used as a powerful ligand for metals and a binding agent for DNA/RNA. We discovered that phenanthroline could be used as a nucleophilic catalyst to efficiently access high yielding and diastereoselective α-1,2-cis glycosides through the coupling of hydroxyl acceptors with α-glycosyl bromide donors. We have conducted an extensive investigation into the reaction mechanism, wherein the two glycosyl phenanthrolinium ion intermediates, a 4C1 chair-liked β-conformer and a B2,5 boat-like α-conformer, have been detected in a ratio of 2:1 (β:α) using variable temperature NMR experiments. Furthermore, NMR studies illustrate that a hydrogen bonding is formed between the second nitrogen atom of phenanthroline and the C1-anomeric hydrogen of sugar moiety to stabilize the phenanthrolinium ion intermediates. To obtain high α-1,2-cis stereoselectivity, a Curtin-Hammett scenario was proposed wherein interconversion of the 4C1 chair-like β-conformer and B2,5 boat-like α-conformer is more rapid than nucleophilic addition. Hydroxyl attack takes place from the α-face of the more reactive 4C1 β-phenanthrolinium intermediate to give an α-anomeric product. The utility of the phenanthroline catalysis is expanded to sterically hindered hydroxyl nucleophiles and chemoselective coupling of an alkyl hydroxyl group in the presence of a free C1-hemiacetal. In addition, the phenanthroline-based catalyst has a pronounced effect on site-selective couplings of triol motifs and orthogonally activates the anomeric bromide leaving group over the anomeric fluoride and sulfide counterparts.
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Affiliation(s)
- Jiayi Li
- Department of Chemistry, Wayne State University, Detroit, Michigan, 48202, United States
| | - Hien M Nguyen
- Department of Chemistry, Wayne State University, Detroit, Michigan, 48202, United States
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Direct Addition of Amides to Glycals Enabled by Solvation‐Insusceptible 2‐Haloazolium Salt Catalysis. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201907129] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Nakatsuji Y, Kobayashi Y, Takemoto Y. Direct Addition of Amides to Glycals Enabled by Solvation-Insusceptible 2-Haloazolium Salt Catalysis. Angew Chem Int Ed Engl 2019; 58:14115-14119. [PMID: 31392793 DOI: 10.1002/anie.201907129] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2019] [Revised: 07/24/2019] [Indexed: 01/12/2023]
Abstract
The direct 2-deoxyglycosylation of nucleophiles with glycals leads to biologically and pharmacologically important 2-deoxysugar compounds. Although the direct addition of hydroxyl and sulfonamide groups have been well developed, the direct 2-deoxyglycosylation of amide groups has not been reported to date. Herein, we show the first direct 2-deoxyglycosylation of amide groups using a newly designed Brønsted acid catalyst under mild conditions. Through mechanistic investigations, we discovered that the amide group can inhibit acid catalysts, and the inhibition has made the 2-deoxyglycosylation reaction difficult. Diffusion-ordered two-dimensional NMR spectroscopy analysis implied that the 2-chloroazolium salt catalyst was less likely to form aggregates with amides in comparison to other acid catalysts. The chlorine atom and the extended π-scaffold of the catalyst played a crucial role for this phenomenon. This relative insusceptibility to inhibition by amides is more responsible for the catalytic activity than the strength of the acidity.
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Affiliation(s)
- Yuya Nakatsuji
- Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Shimoadachi-cho, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Yusuke Kobayashi
- Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Shimoadachi-cho, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Yoshiji Takemoto
- Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Shimoadachi-cho, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
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Abstract
Because of their pivotal biological functions, attention to sugars and glycobiology has grown rapidly in recent decades, leading to increased demand for homogeneous oligosaccharides. The stereoselective preparation of oligosaccharides by chemical means remains challenging and continues to be a vivid research area for organic chemists. In the past decade, new approaches and reinvestigated traditional methods have transformed the field. These developments include novel catalyses, various types of glycosylation modulators and the use of photochemical energy to facilitate glycosylation. This Minireview presents a brief overview of the latest trends in chemical glycosylation, with emphasis on the stereoselective synthetic protocols developed in the past decade.
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Affiliation(s)
- Jesse Ling
- Department of Chemistry, Tufts University, 62 Talbot Ave., Medford, MA 02155, USA
| | - Clay S Bennett
- Department of Chemistry, Tufts University, 62 Talbot Ave., Medford, MA 02155, USA
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Kobayashi Y, Nakatsuji Y, Li S, Tsuzuki S, Takemoto Y. Direct N
-Glycofunctionalization of Amides with Glycosyl Trichloroacetimidate by Thiourea/Halogen Bond Donor Co-Catalysis. Angew Chem Int Ed Engl 2018; 57:3646-3650. [DOI: 10.1002/anie.201712726] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Revised: 01/16/2018] [Indexed: 12/23/2022]
Affiliation(s)
- Yusuke Kobayashi
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Yuya Nakatsuji
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Shanji Li
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Seiji Tsuzuki
- Research Initiative of Computational Sciences (RICS); Nanosystem Research Institute (NRI); National Institute of Advanced Industrial Science and Technology (AIST); 1-1-1 Umezono Tsukuba Ibaraki 305-8568 Japan
| | - Yoshiji Takemoto
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
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Kobayashi Y, Nakatsuji Y, Li S, Tsuzuki S, Takemoto Y. Direct N
-Glycofunctionalization of Amides with Glycosyl Trichloroacetimidate by Thiourea/Halogen Bond Donor Co-Catalysis. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712726] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Yusuke Kobayashi
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Yuya Nakatsuji
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Shanji Li
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
| | - Seiji Tsuzuki
- Research Initiative of Computational Sciences (RICS); Nanosystem Research Institute (NRI); National Institute of Advanced Industrial Science and Technology (AIST); 1-1-1 Umezono Tsukuba Ibaraki 305-8568 Japan
| | - Yoshiji Takemoto
- Graduate School of Pharmaceutical Sciences; Kyoto University; Yoshida Sakyo-ku Kyoto 606-8501 Japan
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Affiliation(s)
- Ryan Williams
- School of Chemistry; University of Bristol; Cantock's Close BS8 1TS Bristol U.K
| | - M. Carmen Galan
- School of Chemistry; University of Bristol; Cantock's Close BS8 1TS Bristol U.K
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Sun L, Wu X, Xiong DC, Ye XS. Stereoselective Koenigs-Knorr Glycosylation Catalyzed by Urea. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201600142] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Lifeng Sun
- State Key Laboratory of Natural and Biomimetic Drugs; School of Pharmaceutical Sciences; Peking University; Xue Yuan Road No. 38 Beijing 100191 China
| | - Xiaowei Wu
- State Key Laboratory of Natural and Biomimetic Drugs; School of Pharmaceutical Sciences; Peking University; Xue Yuan Road No. 38 Beijing 100191 China
| | - De-Cai Xiong
- State Key Laboratory of Natural and Biomimetic Drugs; School of Pharmaceutical Sciences; Peking University; Xue Yuan Road No. 38 Beijing 100191 China
| | - Xin-Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs; School of Pharmaceutical Sciences; Peking University; Xue Yuan Road No. 38 Beijing 100191 China
- National Engineering Research Center for Carbohydrate Synthesis; Jiangxi Normal University; Nanchang 330022 Jiangxi China
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Sun L, Wu X, Xiong DC, Ye XS. Stereoselective Koenigs-Knorr Glycosylation Catalyzed by Urea. Angew Chem Int Ed Engl 2016; 55:8041-4. [PMID: 27244701 DOI: 10.1002/anie.201600142] [Citation(s) in RCA: 84] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2016] [Revised: 04/08/2016] [Indexed: 11/05/2022]
Abstract
A stereoselective Koenigs-Knorr glycosylation reaction under the catalysis of urea is described. This method is characterized by urea-mediated hydrogen-bond activation and subsequent glycosylation with glycosyl chlorides or bromides. Excellent yields and high anomeric selectivity can be achieved in most cases. Moreover, the low α-stereoselectivity of glycosylations observed when using perbenzylated glucosyl donors can be greatly improved by the addition of tri-(2,4,6-trimethoxyphenyl)phosphine (TTMPP).
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Affiliation(s)
- Lifeng Sun
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Xiaowei Wu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - De-Cai Xiong
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Xin-Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China. .,National Engineering Research Center for Carbohydrate Synthesis, Jiangxi Normal University, Nanchang, 330022, Jiangxi, China.
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Das S, Pekel D, Neudörfl JM, Berkessel A. Organokatalytische Glycosylierung durch elektronenarme Pyridiniumsalze. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201503156] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Das S, Pekel D, Neudörfl JM, Berkessel A. Organocatalytic Glycosylation by Using Electron-Deficient Pyridinium Salts. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/anie.201503156] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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Min C, Lin CT, Seidel D. Catalytic Enantioselective Intramolecular Aza-Diels-Alder Reactions. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201501536] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Min C, Lin CT, Seidel D. Catalytic Enantioselective Intramolecular Aza-Diels-Alder Reactions. Angew Chem Int Ed Engl 2015; 54:6608-12. [DOI: 10.1002/anie.201501536] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2015] [Indexed: 11/06/2022]
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Balmond EI, Benito-Alifonso D, Coe DM, Alder RW, McGarrigle EM, Galan MC. A 3,4-trans-fused cyclic protecting group facilitates α-selective catalytic synthesis of 2-deoxyglycosides. Angew Chem Int Ed Engl 2014; 53:8190-4. [PMID: 24953049 PMCID: PMC4499252 DOI: 10.1002/anie.201403543] [Citation(s) in RCA: 89] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2014] [Indexed: 11/09/2022]
Abstract
A practical approach has been developed to convert glucals and rhamnals into disaccharides or glycoconjugates with high α-selectivity and yields (77-97%) using a trans-fused cyclic 3,4-O-disiloxane protecting group and TsOH⋅H2O (1 mol%) as a catalyst. Control of the anomeric selectivity arises from conformational locking of the intermediate oxacarbenium cation. Glucals outperform rhamnals because the C6 side-chain conformation augments the selectivity.
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Affiliation(s)
- Edward I Balmond
- School of Chemistry, University of Bristol, Cantock's CloseBristol BS8 1TS (UK)
| | | | - Diane M Coe
- GlaxoSmithKline Medicines Research CentreGunnels Wood Road, Stevenage SG1 2NY (UK)
| | - Roger W Alder
- School of Chemistry, University of Bristol, Cantock's CloseBristol BS8 1TS (UK)
| | - Eoghan M McGarrigle
- Centre for Synthesis and Chemical Biology, UCD School of Chemistry & Chemical Biology, University College DublinBelfield, Dublin 4 (Ireland)
| | - M Carmen Galan
- School of Chemistry, University of Bristol, Cantock's CloseBristol BS8 1TS (UK)
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Balmond EI, Benito-Alifonso D, Coe DM, Alder RW, McGarrigle EM, Galan MC. A 3,4-trans-Fused Cyclic Protecting Group Facilitates α-Selective Catalytic Synthesis of 2-Deoxyglycosides. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201403543] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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Couch ED, Auvil TJ, Mattson AE. Urea-Induced Acid Amplification: A New Approach for Metal-Free Insertion Chemistry. Chemistry 2014; 20:8283-7. [DOI: 10.1002/chem.201403283] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2014] [Indexed: 01/11/2023]
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Min C, Mittal N, Sun DX, Seidel D. Conjugate-Base-Stabilized Brønsted Acids as Asymmetric Catalysts: Enantioselective Povarov Reactions with Secondary Aromatic Amines. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201308196] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Min C, Mittal N, Sun DX, Seidel D. Conjugate-Base-Stabilized Brønsted Acids as Asymmetric Catalysts: Enantioselective Povarov Reactions with Secondary Aromatic Amines. Angew Chem Int Ed Engl 2013; 52:14084-8. [DOI: 10.1002/anie.201308196] [Citation(s) in RCA: 83] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2013] [Indexed: 01/08/2023]
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